ID:

dsi_6955

 Coordinate:

3l:1690729-1690878 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [3l_1690879_1691482_-]; exon [3l_1690879_1691482_-]; intron [3l_1689769_1690878_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GAGTTTGCCAAGCACGCCAATCTTTTCCACCAGTGGCTAACAGAGACAAGGTGAGTGGGGGCTAAGGCTTTCCCCAATGTGGGATACTCCATCCAGAAGTGTGTTGGTTTTATTCGGATCGAATCCATGTACCCATCCCAATCCACACAAGTCCGAAAACAAGTCTCGTGGTCGCGACTCTAACCCCATGAAATACTACGTAACTGAAAGATCCATTCTATTTTCTAGATATTATATGCTGGGTTATAAC
**************************************************....((((((((....))..((((......))))..............(((((((((...(((..((((...))))..)))......))))..))))).(((((((..((.......))..))).))))....))))))...........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 M024
male body		 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
 M023
head
...............................AGTGGCTAACAGAGACAA......................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0
.................................TGGCTAACAGAGACAAG........................................................................................................................................................................................................ 17 0 1 1.00 1 0 0 1 0 0 0 0 0
......................TTTTCCACCAGTGGCTAACAGAGACAAGAA...................................................................................................................................................................................................... 30 2 1 1.00 1 0 0 0 1 0 0 0 0
......................TTTTCCACCAGTGGCTAACAGAGACAA......................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0
....TTGCCAAGCACGCCAATCTTTTCCAC............................................................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0
.....................CTTTTCCACCAGTGGCTAACAGA.............................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................CAGTGGCTAACAGAGACAAGAAC..................................................................................................................................................................................................... 23 3 2 0.50 1 1 0 0 0 0 0 0 0
....................................................................................................................GTTCGAATCCCTGTACCCCT.................................................................................................................. 20 3 3 0.33 1 0 0 0 0 0 0 1 0
.......................................................................................CCCATCAAGAATTGTGTTGG............................................................................................................................................... 20 3 4 0.25 1 0 1 0 0 0 0 0 0
......................................................................................................................TCGAATCCAGGTACC..................................................................................................................... 15 1 7 0.14 1 0 0 1 0 0 0 0 0
...................................................................................................................GGTTCGAATCCAGGTAC...................................................................................................................... 17 2 10 0.10 1 0 0 1 0 0 0 0 0
.............................................................................................................................................................AACAAATCCCGTCGTCGCG.......................................................................... 19 3 11 0.09 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................AGTGAAAGATCCATTGT............................... 17 2 12 0.08 1 0 0 0 0 0 0 1 0
..............................................CCAGGTCAGGGGGGGCTA.......................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 0 0 0 1

Anti-sense strand reads

CTCAAACGGTTCGTGCGGTTAGAAAAGGTGGTCACCGATTGTCTCTGTTCCACTCACCCCCGATTCCGAAAGGGGTTACACCCTATGAGGTAGGTCTTCACACAACCAAAATAAGCCTAGCTTAGGTACATGGGTAGGGTTAGGTGTGTTCAGGCTTTTGTTCAGAGCACCAGCGCTGAGATTGGGGTACTTTATGATGCATTGACTTTCTAGGTAAGATAAAAGATCTATAATATACGACCCAATATTG
**************************************************....((((((((....))..((((......))))..............(((((((((...(((..((((...))))..)))......))))..))))).(((((((..((.......))..))).))))....))))))...........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 SRR553488
RT_0-2 hours eggs
.......................................................ACCCCCGATGCCGAAAGGGGATA............................................................................................................................................................................ 23 2 1 1.00 1 1 0 0 0 0
...........................................................................................................................AGGCACAATGGTAGGGTTA............................................................................................................ 19 3 17 0.06 1 0 1 0 0 0
....................AGAGAAGGTGGTTACCG..................................................................................................................................................................................................................... 17 2 18 0.06 1 0 0 1 0 0
.....................................................................................................................TAGCTTGGGCACAGGGGT................................................................................................................... 18 3 20 0.05 1 0 0 0 1 0
.......................AAAGGTGGTCAGCGGTTGTT............................................................................................................................................................................................................... 20 3 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:1690679-1690928 - dsi_6955 GAGTTTGCCAAGCACGCCAATCTTTTCCACCAGTGGCTAACAGAGACAAGGTGAGTGG--GG--GCTA----A----------GG--CTT-TCCCCA--------------A-TG----------------------TGGGATACTC-CATCCAGAA--GTGTGTTGGTTTT--------------------------ATTCG---------------------------GATC--------------------------------------------------------------------------------------------GAATCCATGT---A------CCCAT------C----CCAATCCA--CA------------------C-AAG------T---------CCGAAAACAAG-TCT--CGTGGTCGC----------GACTC--------------------T-------------------------------------AACC---------CCATG----AA---------------AT-A-CTACGTAACT---GAAA--GAT-CCATTCTAT---TTTCTAGATATTATATGCTGGGTTATAAC
droSec2 scaffold_2:1807094-1807343 - GAGTTTGCCAAGCACGCCAATCTTTTCCACCAGTGGCTAACAGAGACAAGGTGAGTGG--GG--GCTA----A----------GG--CTT-TCCCCA--------------A-TG----------------------TGGGATACTC-CATCCAGAA--GTGTGTTGGTTTT--------------------------ATTCG---------------------------GATC--------------------------------------------------------------------------------------------GAATCCATGT---A------CCCAT------C----CCAATCCA--CA------------------C-AAG------T---------CCGAAAACAAG-TCT--CGTGGTCGC----------GACTC--------------------T-------------------------------------AACC---------CCATG----AA---------------AT-A-CTACGTAACT---GAAA--GAT-CCATTCTAT---TTTCTAGATATTATATGCTGGGTTATAAC
dm3 chr3L:1780895-1781144 - GAGTTTGCCAAGCACGCCAATCTTTTCCACCAGTGGCTAACAGAGACAAGGTGAGTGG--GG--GCTA----A----------GG--CTT-TCCCAA--------------A-TG----------------------TGGGCTACTC-CATCCAGAC--GTGTGTTGGTTTT--------------------------TTTCG---------------------------GATC--------------------------------------------------------------------------------------------GAATCCATGT---T------CCCAT------C----CCAATCCA--CA------------------C-AAA------T---------CCGAAAACAAG-TCT--CGTGGTCGC----------GACTC--------------------T-------------------------------------AACC---------CCATG----AA---------------AT-A-CTACGTAACT---GAAA--GAT-CCATTCTAT---TTTCTAGATATTATATGCTGGGTTATAAC
droEre2 scaffold_4784:1765597-1765845 - GAGTTTGCCAAGCACGCCAATCTTTTCCACCAGTGGCTAACAGAGACAAGGTGAGTGG--TG--ACAA----G----------GG--CTT-GCCCCA--------------A-TT----------------------GGGGCTACTC-TATCCAGAC--GTGTGTTGGTTTT---------------------------TTCG---------------------------GATC--------------------------------------------------------------------------------------------GAATCCATGT---A------CCCAT------C----CCAACCCA--CA------------------C-AAA------T---------CCGAAAACAAG-TCT--CGTGGTCGC----------GACTC--------------------T-------------------------------------CCCC---------CTATG----AA---------------AT-A-CTACGTAACT---GAAA--GAT-CCATTCTAT---TTTCTAGATATTATATGCTGGGTTATAAC
droYak3 3L:1733292-1733543 - GAGTTTGCCAAGCACGCCAATCTATTCCACCAGTGGCTAACAGAGACAAGGTGAGTGG--GG--GCTA----G----------GG--CTT-TCCCCAAATG------------GA----------------------GGGGCTACTC-CATCCAGAC--GTGTGTTGGTTTT---------------------------TTCG---------------------------GATC--------------------------------------------------------------------------------------------AAATCCATGT---A------CCCAT------C----CCAACCCA--CA------------------C-ATA------T---------CCGAAAACAAG-TCT--CGTGGTCGC----------GACTC--------------------T-------------------------------------TCCC---------CCATG----AA---------------AT-A-CTACGTAACT---GAAA--GAT-CCATTCTAT---TTTCTAGATATTATATGCTGGGTTATAAC
droEug1 scf7180000407756:103491-103739 - GAGTTTGCCAAGCATGCCAATCTCTTCCACCAGTGGCTGACAGAGACTAGGTGAGTGG--GG---TTC----G----------GG--T--ACCGTTT---------G-C----GC----------------------GGGGTTACTT-AATCCAGAC--GTGTGTTGGTTTTT-------------------------CTTTG---------------------------GATC--------------------------------------------------------------------------------------------AAATCCATGT---A------CCCAT------C----CCAACCCA--CA------------------C-AAA------T---------CCAAAAACAAG-TCT--TGTGGTCTC----------GACTC--------------------TC-----------------------------------CTCCC---------CCATG----AA---------------AT-----ACGTAACT---GAAA--GAT-CCATTCTAT---TTTCTAGATATTATATGCTGGGTTATAAT
droBia1 scf7180000302428:8476993-8477269 - GAGTTCGCCAAGCACGCCAATCTCTTCCACCAGTGGCTCACAGAGACAAGGTGAGTGG--GG---TTCGACTT----------GGAACTT------------GGTAGCCAG-GCGGGGGTATTAATCCATGCTGGACATG--------------GTC--GTGTGTTGGTTAT---------------------------TTCG---------------------------GATC--------------------------------------------------------------------------------------------GAATCCATAA---G------CCCAT------CCAGCCCAATCCA--CA------------------C-AAA------T---------CCGAAAACAAG-TCT--TGTGGTCTCTACTC-----GACTC--------------------TC-----------------------------------TTCCC---------CCATG----AA---------------AT-A-CTACGTAACT---GAAA--GAT-CCATTCTAT---TTTCTAGATATTATATGCTGGGTTATAAC
droTak1 scf7180000415229:370827-371057 + GAGTTCGCCAAGCACGCCAATCTCTTCCACCAGTGGCTCACAGAGACCAGGTTAGTTG--GG--GTTG----G----------GT--T--AAAGTTGCTTA------------GG----------------------GGGTTTAC---------------TGTGTTGGTTTT---------------------------CTCG---------------------------GATC--------------------------------------------------------------------------------------------AAAC---------A------CCCAT--CCATCCAATCCAATCCA--CA------------------C-GAA------T---------CCGAAAACAAG-TCT--TGTGGTCTT----------G------------------------------------------------------------------------------TG----AA---------------AT-A-CTACGTAACT---GAAA--GAT-CCATTCTATA-TTTTCTAGATATTATATGCTGGGTTATAAC
droEle1 scf7180000491249:3767085-3767349 + GAGTTCGCCAAGCACGCCAATCTCTTCCACCAGTGGCTAACTGAGACAAGGTGAGTGTTGGG--GCTT----G----------GT--A--TATGTATCTTA--------AG-GAG----------------------GGGTTTACTC-AATCCAGAT--GTGTGTTGGTTT--------------------------------------------------------------C--------------------------------------------------------------------------------------------GACTCCATGT---A---CCACCCAT----CCC----CAAGCCCA--CAC-A---------------C-AAA------T---------CCGAAAACAAG-TCT--TGTGGTCTCT---C-----GACTC--------------------TCT---------------------CTCT-------TCTTCCC---------CCATA----AA---------------AA---AAACGTAACT---GAAA--GAT-CCATTCTAT---TTTCTAGATATTATATGCTGGGTTATAAC
droRho1 scf7180000776850:147664-147918 + GAATTCGCCAAGCACGCTAATCTCTTCCACCAGTGGCTGACTGAGACAAGGTGAGTGG--GG---CTC----G----------GG--ATT-CCGCCA---------G-CAGAGGG----------------------GGGGTTACTC-AATCCAGAC--GGGTGTTGGTTTT---------------------------TTTG---------------------------GATC--------------------------------------------------------------------------------------------GAATCCATGT---A------CCCAT------CCCA-CCAACCCA--CA------------------C-AAA------T---------CCGAAAACAAG-TCT--TGAGGTCTC----------GACTC--------------------TC-----------------------------------TTCCC---------CCATG----AA---------------AT-----ACGTAACT---GAAA--GAT-CCATTCTAT---TTTCTAGATATTATATGCTGGGTTATAAC
droFic1 scf7180000454113:292023-292291 + GAGTTCGCCAAGCACGCCAATCTCTTCCACCAGTGGCTCACAGAGACAAGGTGAGTGG--GA--ACTC----A----------GGGACTTGCCGTTG---------G-CAG-GAG----------------------GGGGTTACTT-AATCCAAAC--GTGTGTTGGTTTC---------------------------ATTG---------------------------GATCCATT----------------------------------------------------------------------------------------GAATCCATGT---A------CCCAT------C----CCAGCCCA--CA------------------C-AAA------T---------CCGAAAACAAG-TCT--TGTGGTCTCGA--C-----GACTC--------------------TCTG-------------------------------T--CACT---------CCATA----AA--CG-----------AT-A-AAACGTAACT---GAAA--GAT-CCATTCTAT---TTTCTAGATATTATATGCTGGGTTATAAC
droKik1 scf7180000302577:269058-269345 - GAGTTTGCCAAGCACGCCAATCTCTTCCACCAGTGGCTGACAGAGACAAGGTGAGTGG--GGTGGTTT----G----------GG--T----------------------------------------------------TTTACTT-GATCCAAAAGTGTGTGTTGGTTTT--------------------------ATTCATTTGTTTTTTTTTTTAATGTTGTGTGGGATC--------------------------------------------------------------------------------------------GAATCCATGATGCA------CC-ATCCACATC----CCAATCCA--CA------------------C-AAT------T---------CCAAAAACTA---CT--TGTGGCCTC----------GACTC--------------------TCT---------------------CTCTCTCTCTCTCGTCCC---------CCATT---CAA---------------AT-----ACGTAACT---GAAC-GAAT-GTATTCTAT---TTTCTAGATATTATATGCTGGGTTATAAC
droAna3 scaffold_13337:1056329-1056587 + GAGTTCGCCAAGCACGCCAATCTCTTCCACCATTGGCTCACAGAGACGAGGTGAGTGACGG---GAT-----------------------------------------------------------------------GGGGTACTT--------------------TTTTTTTTATTACCAGTGAGTTTGGAGTTTTGTTCG---------------------AAGTGGAATC----------------------------GA-AGTCCATCCCA----------------------------------------------------------------------------------------AGCCCTCACA-CAGTGTCTGAATCCATCTGACA------T---------CTGAAAACAAC-TCT--TGTGGTCCA----------C-------------------------------------------------------------ATCCT---------CC-------AA---------------AT-ACCTACGTTACT---GAAA-AGAT-CAATTCTAT--TTTTCTAGATATTATATGCTGGGTTATAAC
droBip1 scf7180000396371:1387075-1387329 + GAGTTCGCCAAGCACGCCAATCTCTTCCACCATTGGCTCACAGAGACGAGGTGAGTGACGG---GATG----G----------GG--T-----------------------------------------------------TTATTTCTATTTTACA--GTGAGTTT-----------------------GGAGTTTTGTTCG---------------------AAGTGGAATC----------------------------GA-AGTCCTTCCCA---------------------------------------------------------------------------------------AAACCCT--CAC-AGTGTCTGAATCCATCTGACA------T---------CTGAAAACAAC-TCT--TGTGGTCC--------------------------------------------------------------------------ACCT---------CCATG----AA---------------AT-GCCTACGTTACT---GAAC-AGAT-CAATTCTAT--TTTTCTAGATATTATATGCTGGGTTATAAC
dp5 XR_group8:522184-522494 - GAGTTTGCCAAGCATGCCAATCTCTTCCACCAATGGCTGACAGAAACAAGGTGAGTGT--GT--AATC----G---------------------TATAATAGAGAAGCCAC-GACACGCCAT--ATCCCGGCTGTGCGCGAT--------------T--GTGTGTTGGTTTTTCCATAATC-----------------------------------------------------CATGGTATCCTTGCCCTGCCCCTCAATCCACAATCCCTCCC---------------------------------------------------------------------------T--------------CCCCACACA-CACACACGGAATCCAT-----------------TTCAA-CGAAAACAAACTCT-TGGTGGTCTC----------AA-TC--------------------TC-------------------------------------AATCCATTCGAACCATG----AA---------------AA-----GCGTAACT---GAAA-CGTT-CAATTCTAT--TTTTCTAGATATTATATGCTGGGTTATAAC
droPer2 scaffold_32:959434-959744 + GAGTTTGCCAAGCATGCCAATCTCTTCCACCAATGGCTGACAGAAACAAGGTGAGTGT--GT--AATA----G---------------------TATAATAGAGAAGCCAC-GACATGCCAT--ATCCCGGCTGTGCGCGAT--------------T--GTGTGTTGGTTTTTCCATAATC-----------------------------------------------------CATGGTATCCCTGCCCTGCCCCTCAATCCACAATCCCTCCC---------------------------------------------------------------------------T--------------CCCCACACA-CACACACGGAATCCAT-----------------TTCAA-CGAAAACAAACTCT-TGGTGGTCTC----------AA-TC--------------------TC-------------------------------------AATCCATTCGAACCATG----AA---------------AA-----GCGTAACT---GAAA-CGTT-CAATTCTAT--TTTTCTAGATATTATATGCTGGGTTATAAC
droWil2 scf2_1100000004540:1243052-1243366 + GAGTTTGCCAAGCATGCCAATCTCTTCCATCAATGGCTAACCGAAACGAGGTGAGTTT--TG--ATGG-GCCTTCATTTT---GG----------------------------------------------------AAACCTAC------------------------------------------------------TTTA---------------------GGGTATAAAC----------------------------AA-ACCCATACCCA-A------------------------------------------------AACTC---GACGCACACA--CACAC--ACACC----CAAAATCA--TAC-A---------------T-ACATACATATATATATTGACTGAAAACAAT-TCT--TGTGGTCCCC---CGAGGTGACTTCCCCGAGCTCATCGTTGCTCTCTGTGTGGCA------------------------AATTCTC---------ACATAAACCAA---------------AC-----ATCAAACT---GAAAACGTTCCAATTCTATATTTTTCTAGATATTATATGCTGGGTTATAAT
droVir3 scaffold_10322:85248-85486 + GAGTTCGCCAAGCACGCCAATCTCTTCCATCAGTGGCTAACCGAAACTAGGTGAGTGA--CC----TG----C-------GCCGG--T-T---------------------------------------------------GTTCTT-------------GGTGTTAGTTTT---------------------------T------------------------------GATTCCT-----------------------------------CC-----------------------------------AGCCAAGTCTTGGCAACAATTTCT---------------------------------------------------------------------------TTTAA-CGAAAACAAC-TCT--TGTGGTCTCC---CGC---G------------------------------------------CGTAATCTCG-------TCATTCT---------CCATT----AA---------------TA-ATCCGCGTAACT---GAAA-CGTT-CAATTCTGT--TCTTCTAGATATTATATGCTGGGTTATAAT
droMoj3 scaffold_6680:2142726-2142995 + GAATTCGCCAAGCACGCAAATCTCTTCCATCAATGGCTAACCGAAACAAGGTGAGTGA--AC--G------------------------------------------------------------------------------ACTC-CATT-------------------------------------------------------------------------------------------------------------------------CCCAGTCCTGTCTAGTATTTTACTATTGGTGTCGGT-----------------AACTTCATTC---C------TTCAT------C-----CAATCCA--AT------------------T-AAATTCA-ATTCTTGTTAA-CGAAAACAAC-TCT--TGTGGTCAC-------------TC--------------------TCTGTG----AAATCTCGCGTAATTTCG-------TTAAATC---------TC-------AA---------------ATAA-TTTCGTAACT---GAAA-TGCT-CAATTCTGT--TTTTCTAGATATTATATGCTGGGTTATAAT
droGri2 scaffold_15110:413245-413490 - GAATTTGCTAAGCACGCCAATCTTTTCCACCAATGGCTAACCGAAACGAGGTGAGTTA--AC---------------------------------CA--------------A-T--------------------------CCTATTC-CTCCTTGAA--GCGCGTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--CTCAT--ATCTC----TCAATCCA--CAC-A-TGATT-----------AAATCCA-AT---------TTAAAAATGAT-TCTTTTGTGATCGG----------GTTCC--------------------T-------------------------------------CCCT---------CCAAA----AAAACAATGATTTTCTCATAA-CTTCGTAATTTCCAAAC--GTT-AAATTCTGTGTTCTTCTAGATATTATATGCTGGGTTATAAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GAGTTTGCCAAGCACGCCAATCTTTTCCACCAGTGGCTAACAGAGACAAGGTGAGTGG--GG--GCTA----A----------GG--CTT-TCCCCA--------------A-TG----------------------TGGGATACTC-CATCCAGAA--GTGTGTTGGTTTT--------------------------ATTCG---------------------------GATC--------------------------------------------------------------------------------------------GAATCCATGT---A------CCCAT------C----CCAATCCA--CA------------------C-AAG------T---------CCGAAAACAAG-TCT--CGTGGTCGC----------GACTC--------------------T-------------------------------------AACC---------CCATG----AA---------------AT-A-CTACGTAACT---GAAA--GAT-CCATTCTAT---TTTCTAGATATTATATGCTGGGTTATAACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................AGTGGCTAACAGAGACAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000000100000
.................................TGGCTAACAGAGACAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000000001000000
......................TTTTCCACCAGTGGCTAACAGAGACAAGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000001000000000
......................TTTTCCACCAGTGGCTAACAGAGACAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000010000
....TTGCCAAGCACGCCAATCTTTTCCAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
.....................CTTTTCCACCAGTGGCTAACAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
..............................CAGTGGCTAACAGAGACAAGAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50100010000000000000
droSec2
GAGTTTGCCAAGCACGCCAATCTTTTCCACCAGTGGCTAACAGAGACAAGGTGAGTGG--GG--GCTA----A----------GG--CTT-TCCCCA--------------A-TG----------------------TGGGATACTC-CATCCAGAA--GTGTGTTGGTTTT--------------------------ATTCG---------------------------GATC--------------------------------------------------------------------------------------------GAATCCATGT---A------CCCAT------C----CCAATCCA--CA------------------C-AAG------T---------CCGAAAACAAG-TCT--CGTGGTCGC----------GACTC--------------------T-------------------------------------AACC---------CCATG----AA---------------AT-A-CTACGTAACT---GAAA--GAT-CCATTCTAT---TTTCTAGATATTATATGCTGGGTTATAACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................TTTTCCACCAGTGGCTAACAGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
..................AATCTTTTCCACCAGTGGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
.....................CTTTTCCACCAGTGGCTAACAGAGACAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010010
.............................CCAGTGGCTAACAGAGACAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.........AAGCACGCCAATCTTTTCCACCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
.....................CTTTTCCACCAGTGGCTAACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
................................GTGGCTAACAGAGACAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
dm3
GAGTTTGCCAAGCACGCCAATCTTTTCCACCAGTGGCTAACAGAGACAAGGTGAGTGG--GG--GCTA----A----------GG--CTT-TCCCAA--------------A-TG----------------------TGGGCTACTC-CATCCAGAC--GTGTGTTGGTTTT--------------------------TTTCG---------------------------GATC--------------------------------------------------------------------------------------------GAATCCATGT---T------CCCAT------C----CCAATCCA--CA------------------C-AAA------T---------CCGAAAACAAG-TCT--CGTGGTCGC----------GACTC--------------------T-------------------------------------AACC---------CCATG----AA---------------AT-A-CTACGTAACT---GAAA--GAT-CCATTCTAT---TTTCTAGATATTATATGCTGGGTTATAACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................TTTCCACCAGTGGCTAACAGAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CGCCAATCTTTTCCACCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTTCCACCAGTGGCTAACAGAGACAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000001000100000000000000
...........GCACGCCAATCTTTTCCACCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TTTTCCACCAGTGGCTAACAGAGACAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...............................AGTGGCTAACAGAGACAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000
................................GTGGCTAACAGAGACAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000
....................TCTTTTCCACCAGTGGCTAACAGAGACAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CCACCAGTGGCTAACAGAGACAAGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TTTTCCACCAGTGGCTAACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............ACGCCAATCTTTTCCACCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACAAG-TCT--CGTGGTCGC----------GA.........................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CACGCCAATCTTTTCCACCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GCACGCCAATCTTTTCCACCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................CTC-CATCCAGAC--GTGTGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GAAAACAAG-TCT--CGTGGTCGC----------GAC........................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TCCACCAGTGGCTAACAGAGACAAGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.............ACGCCAATCTTTTCCACCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...................ATCTTTTCCACCAGTGGCTAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AATCTTTTCCACCAGTGGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............GCCAATCTTTTCCACCAGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TTTGCCAAGCACGCCAATCTTTTCCAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TGGCTAACAGAGACAAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................A--CA------------------C-AAA------T---------CCGAAAACAAG-TCT--CGTGGT........................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................CAGTGGCTAACAGAGACAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
..................AATCTTTTCCACCAGTGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................AGTGGCTAACAGAGACAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.....TGCCAAGCACGCCAATCTTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTTCCACCAGTGGCTAACAGAGACAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................TTTCCACCAGTGGCTAACAGAGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....................TCTTTTCCACCAGTGGCTAACAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AGCACGCCAATCTTTTCCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GCACGCCAATCTTTTCCACCAGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................CTC-CATCCAGAC--GTGTGTTGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.......................TTTCCACCAGTGGCTAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ATCTTTTCCACCAGTGGCTAACAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCGC----------GACTC--------------------T-------------------------------------AACC---------CCATG----AA---------------AT-A-C...............................................................2711.0010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CGCCAATCTTTTCCACCAGTGGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTTCCACCAGTGGCTAACAGAGACAAGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TTTCCACCAGTGGCTAACAGAGACAAGAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TTTGCCAAGCACGCCAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................GTGTGTTGGTTTT--------------------------TTTCG---------------------------GTG...................................................................................................................................................................................................................................................................................................................................................................................................21110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GAGTTTGCCAAGCACGCCAATCTTTTCCACCAGTGGCTAACAGAGACAAGGTGAGTGG--TG--ACAA----G----------GG--CTT-GCCCCA--------------A-TT----------------------GGGGCTACTC-TATCCAGAC--GTGTGTTGGTTTT---------------------------TTCG---------------------------GATC--------------------------------------------------------------------------------------------GAATCCATGT---A------CCCAT------C----CCAACCCA--CA------------------C-AAA------T---------CCGAAAACAAG-TCT--CGTGGTCGC----------GACTC--------------------T-------------------------------------CCCC---------CTATG----AA---------------AT-A-CTACGTAACT---GAAA--GAT-CCATTCTAT---TTTCTAGATATTATATGCTGGGTTATAACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................ATCTTTTCCACCAGTGGCTAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0022000000
................................GTGGCTAACAGAGACAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020002000
...........GCACGCCAATCTTTTCCACCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000200
..........................CCACCAGTGGCTAACAGAGAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
.AGTTTGCCAAGCACGCCAATCTTTTCCAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000
..............................CAGTGGCTAACAGAGACAAGAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
........................TTCCACCAGTGGCTAACAGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
.................CAATCTTTTCCACCAGTGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
.....................................TAACAGAGACAAGGTGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
...................ATCTTTTCCACCAGTGGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
...............................AGTGGCTAACAGAGACAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
............CACGCCAATCTTTTCCACCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
droYak3
GAGTTTGCCAAGCACGCCAATCTATTCCACCAGTGGCTAACAGAGACAAGGTGAGTGG--GG--GCTA----G----------GG--CTT-TCCCCAAATG------------GA----------------------GGGGCTACTC-CATCCAGAC--GTGTGTTGGTTTT---------------------------TTCG---------------------------GATC--------------------------------------------------------------------------------------------AAATCCATGT---A------CCCAT------C----CCAACCCA--CA------------------C-ATA------T---------CCGAAAACAAG-TCT--CGTGGTCGC----------GACTC--------------------T-------------------------------------TCCC---------CCATG----AA---------------AT-A-CTACGTAACT---GAAA--GAT-CCATTCTAT---TTTCTAGATATTATATGCTGGGTTATAACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................CACCAGTGGCTAACAGAGACAAGAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00201100000000
......GCCAAGCACGCCAATCTATTCCACCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
...............................AGTGGCTAACAGAGACAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010000000
..............CGCCAATCTATTCCACCAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.................CAATCTATTCCACCAGTGGCTAACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
............CACGCCAATCTATTCCACCAGTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
......................TATTCCACCAGTGGCTAACAGAGACAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
..................AATCTATTCCACCAGTGGCTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..................AATCTATTCCACCAGTGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
..................AATCTATTCCACCAGTGGCTAACAGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
................................GTGGCTAACAGAGACAAGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50101000000000
droEug1
GAGTTTGCCAAGCATGCCAATCTCTTCCACCAGTGGCTGACAGAGACTAGGTGAGTGG--GG---TTC----G----------GG--T--ACCGTTT---------G-C----GC----------------------GGGGTTACTT-AATCCAGAC--GTGTGTTGGTTTTT-------------------------CTTTG---------------------------GATC--------------------------------------------------------------------------------------------AAATCCATGT---A------CCCAT------C----CCAACCCA--CA------------------C-AAA------T---------CCAAAAACAAG-TCT--TGTGGTCTC----------GACTC--------------------TC-----------------------------------CTCCC---------CCATG----AA---------------AT-----ACGTAACT---GAAA--GAT-CCATTCTAT---TTTCTAGATATTATATGCTGGGTTATAATSizeHit CountTotal NormTotal
No Reads
droBia1
GAGTTCGCCAAGCACGCCAATCTCTTCCACCAGTGGCTCACAGAGACAAGGTGAGTGG--GG---TTCGACTT----------GGAACTT------------GGTAGCCAG-GCGGGGGTATTAATCCATGCTGGACATG--------------GTC--GTGTGTTGGTTAT---------------------------TTCG---------------------------GATC--------------------------------------------------------------------------------------------GAATCCATAA---G------CCCAT------CCAGCCCAATCCA--CA------------------C-AAA------T---------CCGAAAACAAG-TCT--TGTGGTCTCTACTC-----GACTC--------------------TC-----------------------------------TTCCC---------CCATG----AA---------------AT-A-CTACGTAACT---GAAA--GAT-CCATTCTAT---TTTCTAGATATTATATGCTGGGTTATAACSizeHit CountTotal NormTotal
No Reads
droTak1
GAGTTCGCCAAGCACGCCAATCTCTTCCACCAGTGGCTCACAGAGACCAGGTTAGTTG--GG--GTTG----G----------GT--T--AAAGTTGCTTA------------GG----------------------GGGTTTAC---------------TGTGTTGGTTTT---------------------------CTCG---------------------------GATC--------------------------------------------------------------------------------------------AAAC---------A------CCCAT--CCATCCAATCCAATCCA--CA------------------C-GAA------T---------CCGAAAACAAG-TCT--TGTGGTCTT----------G------------------------------------------------------------------------------TG----AA---------------AT-A-CTACGTAACT---GAAA--GAT-CCATTCTATA-TTTTCTAGATATTATATGCTGGGTTATAACSizeHit CountTotal NormTotal
No Reads
droEle1
GAGTTCGCCAAGCACGCCAATCTCTTCCACCAGTGGCTAACTGAGACAAGGTGAGTGTTGGG--GCTT----G----------GT--A--TATGTATCTTA--------AG-GAG----------------------GGGTTTACTC-AATCCAGAT--GTGTGTTGGTTT--------------------------------------------------------------C--------------------------------------------------------------------------------------------GACTCCATGT---A---CCACCCAT----CCC----CAAGCCCA--CAC-A---------------C-AAA------T---------CCGAAAACAAG-TCT--TGTGGTCTCT---C-----GACTC--------------------TCT---------------------CTCT-------TCTTCCC---------CCATA----AA---------------AA---AAACGTAACT---GAAA--GAT-CCATTCTAT---TTTCTAGATATTATATGCTGGGTTATAACSizeHit CountTotal NormTotal
No Reads
droRho1
GAATTCGCCAAGCACGCTAATCTCTTCCACCAGTGGCTGACTGAGACAAGGTGAGTGG--GG---CTC----G----------GG--ATT-CCGCCA---------G-CAGAGGG----------------------GGGGTTACTC-AATCCAGAC--GGGTGTTGGTTTT---------------------------TTTG---------------------------GATC--------------------------------------------------------------------------------------------GAATCCATGT---A------CCCAT------CCCA-CCAACCCA--CA------------------C-AAA------T---------CCGAAAACAAG-TCT--TGAGGTCTC----------GACTC--------------------TC-----------------------------------TTCCC---------CCATG----AA---------------AT-----ACGTAACT---GAAA--GAT-CCATTCTAT---TTTCTAGATATTATATGCTGGGTTATAACSizeHit CountTotal NormTotal
No Reads
droFic1
GAGTTCGCCAAGCACGCCAATCTCTTCCACCAGTGGCTCACAGAGACAAGGTGAGTGG--GA--ACTC----A----------GGGACTTGCCGTTG---------G-CAG-GAG----------------------GGGGTTACTT-AATCCAAAC--GTGTGTTGGTTTC---------------------------ATTG---------------------------GATCCATT----------------------------------------------------------------------------------------GAATCCATGT---A------CCCAT------C----CCAGCCCA--CA------------------C-AAA------T---------CCGAAAACAAG-TCT--TGTGGTCTCGA--C-----GACTC--------------------TCTG-------------------------------T--CACT---------CCATA----AA--CG-----------AT-A-AAACGTAACT---GAAA--GAT-CCATTCTAT---TTTCTAGATATTATATGCTGGGTTATAACSizeHit CountTotal NormTotal
No Reads
droKik1
GAGTTTGCCAAGCACGCCAATCTCTTCCACCAGTGGCTGACAGAGACAAGGTGAGTGG--GGTGGTTT----G----------GG--T----------------------------------------------------TTTACTT-GATCCAAAAGTGTGTGTTGGTTTT--------------------------ATTCATTTGTTTTTTTTTTTAATGTTGTGTGGGATC--------------------------------------------------------------------------------------------GAATCCATGATGCA------CC-ATCCACATC----CCAATCCA--CA------------------C-AAT------T---------CCAAAAACTA---CT--TGTGGCCTC----------GACTC--------------------TCT---------------------CTCTCTCTCTCTCGTCCC---------CCATT---CAA---------------AT-----ACGTAACT---GAAC-GAAT-GTATTCTAT---TTTCTAGATATTATATGCTGGGTTATAACSizeHit CountTotal NormTotal
No Reads
droAna3
GAGTTCGCCAAGCACGCCAATCTCTTCCACCATTGGCTCACAGAGACGAGGTGAGTGACGG---GAT-----------------------------------------------------------------------GGGGTACTT--------------------TTTTTTTTATTACCAGTGAGTTTGGAGTTTTGTTCG---------------------AAGTGGAATC----------------------------GA-AGTCCATCCCA----------------------------------------------------------------------------------------AGCCCTCACA-CAGTGTCTGAATCCATCTGACA------T---------CTGAAAACAAC-TCT--TGTGGTCCA----------C-------------------------------------------------------------ATCCT---------CC-------AA---------------AT-ACCTACGTTACT---GAAA-AGAT-CAATTCTAT--TTTTCTAGATATTATATGCTGGGTTATAACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........AAGCACGCCAATCTCTTCCACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
...................ATCTCTTCCACCATTGGCTCACAGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
............CACGCCAATCTCTTCCACCATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
.......................CTTCCACCATTGGCTCACAGAGACGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
...TTCGCCAAGCACGCCAATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...................ATCTCTTCCACCATTGGCTCACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
droBip1
GAGTTCGCCAAGCACGCCAATCTCTTCCACCATTGGCTCACAGAGACGAGGTGAGTGACGG---GATG----G----------GG--T-----------------------------------------------------TTATTTCTATTTTACA--GTGAGTTT-----------------------GGAGTTTTGTTCG---------------------AAGTGGAATC----------------------------GA-AGTCCTTCCCA---------------------------------------------------------------------------------------AAACCCT--CAC-AGTGTCTGAATCCATCTGACA------T---------CTGAAAACAAC-TCT--TGTGGTCC--------------------------------------------------------------------------ACCT---------CCATG----AA---------------AT-GCCTACGTTACT---GAAC-AGAT-CAATTCTAT--TTTTCTAGATATTATATGCTGGGTTATAACSizeHit CountTotal NormTotal
No Reads
dp5
GAGTTTGCCAAGCATGCCAATCTCTTCCACCAATGGCTGACAGAAACAAGGTGAGTGT--GT--AATC----G---------------------TATAATAGAGAAGCCAC-GACACGCCAT--ATCCCGGCTGTGCGCGAT--------------T--GTGTGTTGGTTTTTCCATAATC-----------------------------------------------------CATGGTATCCTTGCCCTGCCCCTCAATCCACAATCCCTCCC---------------------------------------------------------------------------T--------------CCCCACACA-CACACACGGAATCCAT-----------------TTCAA-CGAAAACAAACTCT-TGGTGGTCTC----------AA-TC--------------------TC-------------------------------------AATCCATTCGAACCATG----AA---------------AA-----GCGTAACT---GAAA-CGTT-CAATTCTAT--TTTTCTAGATATTATATGCTGGGTTATAACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................ATCTCTTCCACCAATGGCTGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.....................................................................................................................GCCAT--ATCCCGGCTGTGCGCGAT--------------T--GTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
..................AATCTCTTCCACCAATGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.....................CTCTTCCACCAATGGCTGACAGAAACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
.....TGCCAAGCATGCCAATCTCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100000
............................................................................................................................ATCCCGGCTGTGCGCGAT--------------T--G............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...........GCATGCCAATCTCTTCCACCAATGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
........CAAGCATGCCAATCTCTTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.................CAATCTCTTCCACCAATGGCTGACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.............ATGCCAATCTCTTCCACCAATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000000
droPer2
GAGTTTGCCAAGCATGCCAATCTCTTCCACCAATGGCTGACAGAAACAAGGTGAGTGT--GT--AATA----G---------------------TATAATAGAGAAGCCAC-GACATGCCAT--ATCCCGGCTGTGCGCGAT--------------T--GTGTGTTGGTTTTTCCATAATC-----------------------------------------------------CATGGTATCCCTGCCCTGCCCCTCAATCCACAATCCCTCCC---------------------------------------------------------------------------T--------------CCCCACACA-CACACACGGAATCCAT-----------------TTCAA-CGAAAACAAACTCT-TGGTGGTCTC----------AA-TC--------------------TC-------------------------------------AATCCATTCGAACCATG----AA---------------AA-----GCGTAACT---GAAA-CGTT-CAATTCTAT--TTTTCTAGATATTATATGCTGGGTTATAACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................CCACCAATGGCTGACAGAAACAAGAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.003300000
....TTGCCAAGCATGCCAATCTCTTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..................AATCTCTTCCACCAATGGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
.........AAGCATGCCAATCTCTTCCACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
droWil2
GAGTTTGCCAAGCATGCCAATCTCTTCCATCAATGGCTAACCGAAACGAGGTGAGTTT--TG--ATGG-GCCTTCATTTT---GG----------------------------------------------------AAACCTAC------------------------------------------------------TTTA---------------------GGGTATAAAC----------------------------AA-ACCCATACCCA-A------------------------------------------------AACTC---GACGCACACA--CACAC--ACACC----CAAAATCA--TAC-A---------------T-ACATACATATATATATTGACTGAAAACAAT-TCT--TGTGGTCCCC---CGAGGTGACTTCCCCGAGCTCATCGTTGCTCTCTGTGTGGCA------------------------AATTCTC---------ACATAAACCAA---------------AC-----ATCAAACT---GAAAACGTTCCAATTCTATATTTTTCTAGATATTATATGCTGGGTTATAATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................TCCATCAATGGCTAACCGAAACGAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
...........GCATGCCAATCTCTTCCATCAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
...............................AATGGCTAACCGAAACGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
............CATGCCAATCTCTTCCATCAATGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
...................................GCTAACCGAAACGAGGTGAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
droVir3
GAGTTCGCCAAGCACGCCAATCTCTTCCATCAGTGGCTAACCGAAACTAGGTGAGTGA--CC----TG----C-------GCCGG--T-T---------------------------------------------------GTTCTT-------------GGTGTTAGTTTT---------------------------T------------------------------GATTCCT-----------------------------------CC-----------------------------------AGCCAAGTCTTGGCAACAATTTCT---------------------------------------------------------------------------TTTAA-CGAAAACAAC-TCT--TGTGGTCTCC---CGC---G------------------------------------------CGTAATCTCG-------TCATTCT---------CCATT----AA---------------TA-ATCCGCGTAACT---GAAA-CGTT-CAATTCTGT--TCTTCTAGATATTATATGCTGGGTTATAATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................ATCTCTTCCATCAGTGGCTAACCGAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000010000000000000000000000000000000000000000000000
....TCGCCAAGCACGCCAATCTCTTCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
................CCAATCTCTTCCATCAGTGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
.........................TCCATCAGTGGCTAACCGAAACTAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000010000000000000000000000000000000000
.......CCAAGCACGCCAATCTCTTCCAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000100000000000000000000000000000000000000000
..............CGCCAATCTCTTCCATCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000010000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCTGT--TCTTCTAGATATT.................2111.001001000000000000000000000000000000000000000000000000000000000000
..GTTCGCCAAGCACGCCAATCTCTTCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.....CGCCAAGCACGCCAATCTCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
................................GTGGCTAACCGAAACTAGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.331001000000000000000000000000000000000000000000000000000000000000
droMoj3
GAATTCGCCAAGCACGCAAATCTCTTCCATCAATGGCTAACCGAAACAAGGTGAGTGA--AC--G------------------------------------------------------------------------------ACTC-CATT-------------------------------------------------------------------------------------------------------------------------CCCAGTCCTGTCTAGTATTTTACTATTGGTGTCGGT-----------------AACTTCATTC---C------TTCAT------C-----CAATCCA--AT------------------T-AAATTCA-ATTCTTGTTAA-CGAAAACAAC-TCT--TGTGGTCAC-------------TC--------------------TCTGTG----AAATCTCGCGTAATTTCG-------TTAAATC---------TC-------AA---------------ATAA-TTTCGTAACT---GAAA-TGCT-CAATTCTGT--TTTTCTAGATATTATATGCTGGGTTATAATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............ACGCAAATCTCTTCCATCAATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...........................CATCAATGGCTAACCGAAACAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
...............GCAAATCTCTTCCATCAATGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droGri2
GAATTTGCTAAGCACGCCAATCTTTTCCACCAATGGCTAACCGAAACGAGGTGAGTTA--AC---------------------------------CA--------------A-T--------------------------CCTATTC-CTCCTTGAA--GCGCGTC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--CTCAT--ATCTC----TCAATCCA--CAC-A-TGATT-----------AAATCCA-AT---------TTAAAAATGAT-TCTTTTGTGATCGG----------GTTCC--------------------T-------------------------------------CCCT---------CCAAA----AAAACAATGATTTTCTCATAA-CTTCGTAATTTCCAAAC--GTT-AAATTCTGTGTTCTTCTAGATATTATATGCTGGGTTATAATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 04:39 AM