ID:

dsi_6948

 Coordinate:

2l:7487334-7487488 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.0 -22.7 -22.6

Flybase annnotation

CDS [2l_7487489_7487494_-]; five_prime_UTR [2l_7487495_7487555_-]; exon [2l_7487489_7487555_-]; CDS [2l_7486932_7487333_-]; exon [2l_7486525_7487333_-]; intron [2l_7487334_7487488_-]

No Repeatable elements found

mature
  1. dsi_6948  2l:7487466-7487481 -
  2. node_85986:8-23 -
  3. node_67092:860-875 -
star

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CAAGAGTTCAACCAGAGCACAACCCAAAACCCACAAACAGCACCATGAAAGTGAGTTATCAAACGGATTTATCCTGATACACATATCATGGATTGAGCTTAATATTAGTAATTCAACAAGGAAGTTTTAATCCTAAGACTCCAAGATCCTAAAGCAAATCAAATTACTTTAAAACTAACTAAACAATATGTTTTGCATTATACAGTTCGCCGTCGCCGTTATCTTCACCTTGGCCCTCGCCATGGGCGTGCAGTC
**************************************************.(((....)))...(((((((((((((((....))))).)))).(((((((..(((((...(((......)))...)))))..)))).)))..))))))....(((((.((.(((..((((........)))).))).)).))))).........************************************************** 		Read size # Mismatch Hit Count Total Norm Total O002
Head
 SRR618934
dsim w501 ovaries
 O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
...........................AACCCACAAATAGCACC................................................................................................................................................................................................................... 17 1 1 2.00 2 0 2 0 0 0 0
..........ACCAGAGCACAACCCAAAAC................................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0
..AGAGTTCAACCAGAGCAC........................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
............CAGAGCACAACCCAAAAC................................................................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0
..AGAGTTCAACCAGAGCACAACCC...................................................................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
CAAGAGTTCAACCAGAGC............................................................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 1 0 0 0
.......TCAACCAGAGCACAACCC...................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0
.......TCAACCAGAGCACAACCCAAA................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
CAAGAGTTCAACCAGAGCACAACC....................................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................CAACATGGACGTTTTGATCC.......................................................................................................................... 20 3 8 0.75 6 0 0 0 6 0 0
.........................................................ATCAAACGGATTTATC...................................................................................................................................................................................... 16 0 3 0.67 2 0 2 0 0 0 0
...........................AACCCACAAATAGCAC.................................................................................................................................................................................................................... 16 1 4 0.25 1 0 1 0 0 0 0
.....................................TAGCACCATGAGAGTGAGTTC..................................................................................................................................................................................................... 21 3 4 0.25 1 0 0 0 0 1 0
................................................................................................................................................................................................................................ACACCTTGGCCGTCGCCA............. 18 2 6 0.17 1 0 0 0 0 0 1
...........................ATCCCACAAACAGCAC.................................................................................................................................................................................................................... 16 1 7 0.14 1 0 1 0 0 0 0
.................................................................................................................CAACAGGGACGTTTTGATC........................................................................................................................... 19 3 15 0.07 1 0 0 0 1 0 0

Anti-sense strand reads

GTTCTCAAGTTGGTCTCGTGTTGGGTTTTGGGTGTTTGTCGTGGTACTTTCACTCAATAGTTTGCCTAAATAGGACTATGTGTATAGTACCTAACTCGAATTATAATCATTAAGTTGTTCCTTCAAAATTAGGATTCTGAGGTTCTAGGATTTCGTTTAGTTTAATGAAATTTTGATTGATTTGTTATACAAAACGTAATATGTCAAGCGGCAGCGGCAATAGAAGTGGAACCGGGAGCGGTACCCGCACGTCAG
**************************************************.(((....)))...(((((((((((((((....))))).)))).(((((((..(((((...(((......)))...)))))..)))).)))..))))))....(((((.((.(((..((((........)))).))).)).))))).........************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M024
male body		 M025
embryo
 SRR553486
Makindu_3 day-old ovaries
.........................................................TAGTTTGCCTAAATAG...................................................................................................................................................................................... 16 0 3 1.33 4 3 1 0 0 0
.................................................................................................................................TAGGCTTCTGTGGTCCTAG........................................................................................................... 19 3 11 0.18 2 0 0 2 0 0
................................................................CCTAAATAGGAGTGTGTG............................................................................................................................................................................. 18 2 9 0.11 1 1 0 0 0 0
...CTCAAGTTGGTCTAG............................................................................................................................................................................................................................................. 15 1 12 0.08 1 1 0 0 0 0
.............................................................................................................TCAAGTTGATGCTTCAAAAT.............................................................................................................................. 20 3 14 0.07 1 0 0 0 1 0
..................................................CGCTGAATAGTTTGCCTAG.......................................................................................................................................................................................... 19 3 20 0.05 1 0 0 1 0 0
..........................................................................................................................................GAGGTACTAGGATTT...................................................................................................... 15 1 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:7487284-7487538 - dsi_6948 CAAGAGTTCAA---CCAGAGCACAA-C-C------------CAAA-A--CCC-A-C-AAACAGCACCATGAAAGTGAGTTAT---CAA-A----------CGGATTTATC--------------------------------------CTGATAC-------------------------------------------------------AC--------ATA---TCATGGATTGAGCT---------------------------TAATATT---------AGTAATTCAACAAGGA-----AGTTTTAA---TCCTAAGACTCCAAGA-------------------------TCCTAAAGCAAATCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------A-------------------T--TACTT--------TAAAACTAACT------------------------------------------------------------------------AAACAATATGTTTTGC-ATTATACAGTTCGCCGTCGCCGTTATCTTCACCTTGGCCCTCGCCATGGGCGTGCAGTC
droSec2 scaffold_3:3248728-3248999 - CAAGAGTTCAA---CCAGAGCGCAA-C-C------------CAAAAA--CCC-A-C-AAACAGCAACATGAAAGTGAGTTAT---CAA-A----------CGGATTTATC--------------------------------------CTGATAA--TT--------------------------------------------AACAGCAAT--------ATA---GCATGGATTGAGCA---------------------------TAATATT---------AGTAATTCAACAAGGA-----AGTTTTAA---TCCTAAGACTCCACGA-------------------------TCCTAAA----------GCAATTTCGTTT---TATA--------------------------------------------------------------------------------------------------------------------------------------------------A-------------------T--TCCTC--------TAAAACTAATA------------------------------------------------------------------------AAACAATATCTTTTGC-ATTTTACAGTTCGCCGTCGCCGTTATCTTCACCTTGGCCCTCGCCATGGGCGTGCAGTC
dm3 chr2L:7741308-7741525 - CAAGAGTTCAA---CCAGAGCGCAA-C-C------------CAAA-A--CCC-A-C-AAACAGCACCATGAAAGTGAGTTAT---CAA-A----------CGGATTTATC--------------------------------------CTGATAA--TT--------------------------------------------AACAACAAC--------ATA---GCTTGGAT---------------------------------TAATATT---------AGTAATTCAACAAGGA-----AGTTTTAC---TC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAG--------ACTAAACAATATATTTTGC-ATTATACAGTTCGCCGTCGCCGTTATCTTCACCTTGGCCCTCGCCATGGGCGTGCAGTC
droEre2 scaffold_4929:16662634-16662840 - CAAGAGTTCAA---CCAGAGCGCAA-C-C------------CAAA-A--CCC-A-C-AAACAGCACCATGAAAGTGAGTTAT---TAA-A----------CATAAATATC--------------------------------------CTGATAG--TT--------------------------------------------GTCAAAAAC--------GCA-GCGCATGGATTGAGCC------------------------------------------------TTCAACAAGGA-----AGTTGTAA---CCC-A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACAA-ACTTTTCGC-ATTTAACAGTTCGCCGTCGCCGTTATCTTCACTTTGGCCCTCGCCATGGGCGTGCAGTC
droYak3 2L:5161170-5161471 + CAAGAGTTCAA---CCAGAGCGCAA-A-C------------CAAA-A--CCC-A-C-AAACAGCACCATGAAAGTGAGTTAT---CAA-A----------CGGATTTATC--------------------------------------CTGCTAG--TT--------------------------------------------AACCAAAAC--------ATAAAAGCATTGAT---------------------------------------T---------AGTAATTCTTCAAGGA-----AGTTTGGG---TTCCAAGACTTCAAGA-------------------------TCCTAAATCCAATCAAAGAAATCAAGTTTACATAAAATTCTTTTACAAG-----------CT--------------------------------------------------------------------------------TA------------AAGTACGAAT-----------------------------------ATTAAACTT--------AAAAACTAACT------------------------------------------------------------------------AAATAAAACA-TTTG--ATTTAACAGTTCGCCGTCGCCGTTATCTTCACTTTGGCCCTCGCCATGGGCGTGCAGTC
droEug1 scf7180000409463:1018366-1018625 + CAAGAGTTCAA---TCCGAGCGCAA-C-C------------CAAA-A--CCC-A-C-AACCAGCACCATGAAAGTGAGTTAA---AAA-C----------AGGGTTTATCCTTATCATAAAAGAGTTTAGGGATCTGGCAGAAATACCA-------------------------------------------------------------------------------------------TGACAGATGTTAACTCTTTTAATGGATTAAACTGAAAAAGATC------------------------------------------------------------GT-------------------------------------------------------------------TAACCGATCT---------------------------------------------------------------------------G--------------AAG----------------------------------------------------TAAACTA-AAAACT-----------------------------------------------------------AATTCGAACTC--------CCA--------ATA-TTTCTTCAGTTCGCCGTCGCCGTTGTCTTCACCTTGGCCCTCGCCATGGGCGTGCAGTC
droBia1 scf7180000302422:9473422-9473489 - CAAGAGTTCAA---TCCGAGCGCAA-C-C------------CAAA-A--CCC-A-C-AATCAGCATCATGAAAGTGAGTTAT---TAA-A----------CGGAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000414300:23765-24023 - T------TCAACAACCCAACTTCAA-A-A------------CCCA-C--CCC-A-A-AACCATCAACATGAAGGTGAGGTGATATCAGCA----------AGGA-CTATTCTG-----AAAATATTTTCAGAATTTATC---------AAAATAA--TT--------------------------------------------AAGAAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTAAAAAGAA---------------TTCAGAAACATTCGAAAAACTTTTGAAAA------------------------------------------------------TTTAT-----------------A---------AA----------------------------AGAGTTTAATCCTAGAACCTT-GTAAGT-----------------------------------------------------------AATTGACATT-------------CCTATTTG---GTCTTTCAGTTCGCCGTTGCCGTAGTC---ATGTTCGTGTGCGCCCTGGCTGGA-----
droEle1 scf7180000491028:1291237-1291560 + CAAGAGTTCAA---TCAGAGCGCAA-C-C------------CAAA-A--CCC-A-C-AATCAGCACCATGAAAGTGAGTTAT---CAA-A----------GGGATTTATC--------------------------------------CTGATTC--TTA--AAGCT--AAGCTTAAACAAT--AACG-------------TTAA--------------------A-----------------------------------------------------GTTTAG-AATTCTTAAAAAATAAAGTGTTCGGGCTTTTGTAAATCTTCAAGCTTGCCAACTGTTGTA-CAATTAT----------CCATTGCAGGAAAAT---TTTAAATAAAA------------------------------------------------------T----------------A----------------GGAT------TTTAAGTTA------------AAGTAAGTCT-------------------------------------------------------AACTAATTAA-----------------------------------------------ATAAATTTTAAA----A-TTTTA-------------TTC-TCATCCCAGTTCGCCGTCGCCGTTGTCTTCACCTTGGCCCTCGCCATGGGCGTGCAGTC
droRho1 scf7180000763457:13682-14036 - CAAGAGTTCAA---TCAGAGCGCAA-C-C------------CAAA-A--CCC-A-A-AACCAACAACATGAAAGTGAGTTAT---CAA-A----------TGGATTTATC--------------------------------------CTGATTAGGTTA--TAGCTCCGAGCTATAACAAT--AAAG-------------TTAAAAAAGA-GTAACTCA----GCTC-----------------------------TTAAATGGATTAAACTTCAAACGTTT------------------------------------------------------------GTATCAATTAACATCCTAAA----------GAAATTTC---C--------------------------------------------------------TAATTAC----------------AGGATTTTTAATCCTGGGGAT------GC---TG--------------ATGTAATCCT-------------------------------------------------------AACTAATTAAACAATGGGATGAAAAATATTATAAAGTTTGAAAGC----TATTA-------ATATTAAA----AATGGTT-------------TTA-CTATTGCAGTTCGCCGTCGCCGTTGTCTTCACCTTGGCCCTCGCCATGGGCGTGCAGTC
droFic1 scf7180000454115:520011-520089 - CAAGAGTTCAA---ACAGAGCGCAA-C-C------------CCAA-A--CCC-A-C-AATCAGCACCATGAAAGTGAGTTAT---CAACA----------AGGATTCATC--------------------------------------CTGAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302570:328143-328439 + CAAGAGTTCAA---CAAGAGCGCCAAC-C------------CAAA-AAATCC-A-CCTCCAAGCATCATGAAAGTGAGTTAGCT-TAC-A----------AGGATAAAGC--------------------------------------CTGATCC--TTTTA----T------TATAACATTATAAAGTCTAAAGAAACAATTAAA--------------------------------AAAGTTAAAGAA----------------------------------------------------------------------------------------------------------------------------------------------TTTATTCTGCAAGAAAATACGATATTCTGGAAAAACTCTT--------------------------------T----------------GGAT------TTTAA-----------------A---------CT----------------------------CTATTTTATATTTAAAAAATTAAGAAAT-----------------------------------------------------------AATTAATTTT-------------TATTTTTTGC-CTTCTTCAGTTCGCCGTCGCTATTGTCCTCACCCTGGCCCTGGCCATGGGCGTCCAGTC
droAna3 scaffold_12916:6566198-6566483 - dan_568 CAAGAGTTCAC---CAAGAGCACCA------------------AA-C--CAA-A-C-AACCAGCAACATGAAAGTGAGTCCT---CAC-AAAAAAATATAAGGATT-ATCTTC-----------------------------------CTGATCC--TTTGC----C--------------------------------------------------------------------------------------------AAGTGGATTAAAATTAAAAAGACT------------------------------------------------------------G------------------------------------------------------------------------------AAATCCCTAAAAAAATATATAAACAAAAAATCTTTACAACCAA----------------GGAT------TCTAAGTGA------------AAAT--TCCCAAACAAAAAAACCCAAAA--------------------------------------------------------------------------------GCATAATTTTA-------ATAATAAA----A-T------------TC---TTT-AATTTTCAGTTCGCCATCGCCGTTGTCTTCACTCTGGCCCTCGCCATGGGCGTCCAGTC
droBip1 scf7180000396568:246379-246717 + CAAGAGTTCAC---CAAGAGCACCA-A-C------------C-------CAA-A-C-AATCAGCAACATGAAAGTGAGTCCT---TAC-AAAAGAATATAAGGATT-ACTTTT-----------------------------------GTGATCC--TTTGG----C--------------------------------------------------------------------------------------------AAGTGGATAAGACTTAGAAAA----------------------------------------------------------------------------------------------------AGTTTAAAAGAAGTCCTTTTACAAG-----------TTTTGGATATCCCTATGAAAATTTATTAACAAGAAAGCTTTACCAACAA----------------GGG-------TCTAAGTGA------------AAAA--TCCGAA----AAAGAACCAAAAGTTTTCTTAAATTTT-------------------------------------------------ATTATAATTTTTGTGAGTATAATTTATGAAATATATT--------CC-------------------CTA-ATATTTCAGTTCGCCATCGCCGTTGTCTTCACTCTGGCCCTCGCCATGGGCGTGCAGTC
dp5 4_group3:1623943-1624105 - CAAGAGTTCAA---CAAGAGCGCTA-C-C------------AAAA-C--CCAAA-C-CAACAGCAAAATGAAAGTGAGTTTA----GG-T----------CGGG--------------------------------------------------------------------------------------------------------------------------------------ACTGCCACACGGCGAATCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--------------TG-----------------------------------------------------------------CT-----------------------------------------------------------AATCCG--------GCT-------------GTC-CTTTTCCAGTTCGCCATCGCCGTTGTCTTCACTCTGGCCCTTGCCATGGGCGTCCAGTC
droPer2 scaffold_1:3094974-3095141 - CAAGAGTTCAA---CAAGAGCGCTA-C-CAAAC--------CCAAAC--CCAAA-C-CAACAGCAAAATGAAAGTGAGTTTG----GG-T----------CGGG--------------------------------------------------------------------------------------------------------------------------------------ACTGCCACACGGCGAATCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--------------TG-----------------------------------------------------------------CT-----------------------------------------------------------AATCCG--------GCT-------------ATC-CTTTTCCAGTTCGCCATCGCCGTTGTCTTCACTGTGGCCCTTGCCATGGGCGTCCAGTC
droWil2 scf2_1100000004585:2784785-2784954 + CAAGAGTTCAT---TCAGAGCGACCAACC------------AACA-A--CCA-A-A-CCAAATCAAAATGAAAGTGAGTTTT---CTA-T----------TGGA--------------------------------------------------------------------------------------------------------------------------------------AAAGTCAAAGAGGTTATCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--------------T------------------------------------------------------------------CT-----------------------------------------------------------TATCC---TT-------------CATCGTTTGACTACTTTCAGTTCGCCCTCGCTATTGTCTTCAGCCTGGCCCTTGCCATGGGAGTGCAGTC
droVir3 scaffold_12963:19620024-19620179 - CAAGAGTTCAT---TAAGAGCACAA-C-A------------AAGC-A--AAC-A-C-AATTAGCAAAATGAAAGTGAGTATC---CGC-G----------GGGATTTG-----------------------------------------CGAT-------------------------------------------------------------------CTA---GCCAGGAT---------------------------------TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACAT-----------------------ACA-TATTTCCAGTTCGCCATCGCTGTTGTCTTCACCCTGGCCCTCGCCATGGGCGTGCAGTC
droMoj3 scaffold_6500:23579071-23579239 + CAAGAGTTCAA---GCCGAGCGCAA-C-C------------AAGC-A--AAAAACC-AATTAGCAAAATGAAAGTGAGTA-T---TGG-A----------AGGATC------------------------------------------GCAATCC--TTT-------------------------------------------------------------------------------------------------------------------------------------CGAGGA------------------------CTCG-------C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT-----------------------------------------------------------AACAGATATT-------------TATGTTTCG----CCTGCAGTTCGCCATCGCTGTCGTCTTCACCCTGGCCCTGTCCATGGGCGTGCAGTC
droGri2 scaffold_15252:7463409-7463606 - CAAGAGTTCAA---CAAGAGTGCTA-C-CAAGCAACAAAACCAAC-A--AAC-A-A-AACCAGCAAAATGAAAGTGAGTA-T---CCA-A----------AGGATCTCTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTGCAGATAAGGAGTATTCATGTCAATATTAATGCTA-----------------------------------------------------------------CT-----------------------------------------------------------AATTC--------------------CCTTTTGA-TGTTTGCAGTTCGCCATCGCCGTCGTCTTTACTCTGGCCCTTGCCATGGGCGTGCAGTC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CAAGAGTTCAA---CCAGAGCACAA-C-C------------CAAA-A--CCC-A-C-AAACAGCACCATGAAAGTGAGTTAT---CAA-A----------CGGATTTATC--------------------------------------CTGATAC-------------------------------------------------------AC--------ATA---TCATGGATTGAGCT---------------------------TAATATT---------AGTAATTCAACAAGGA-----AGTTTTAA---TCCTAAGACTCCAAGA-------------------------TCCTAAAGCAAATCAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------A-------------------T--TACTT--------TAAAACTAACT------------------------------------------------------------------------AAACAATATGTTTTGC-ATTATACAGTTCGCCGTCGCCGTTATCTTCACCTTGGCCCTCGCCATGGGCGTGCAGTCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........A---CCAGAGCACAA-C-C------------CAAA-A--C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000100000000000
..AGAGTTCAA---CCAGAGCAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
...............CAGAGCACAA-C-C------------CAAA-A--C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
..AGAGTTCAA---CCAGAGCACAA-C-C------------C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000100000000000
CAAGAGTTCAA---CCAGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
.......TCAA---CCAGAGCACAA-C-C------------C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
.......TCAA---CCAGAGCACAA-C-C------------CAAA-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
CAAGAGTTCAA---CCAGAGCACAA-C-C------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000100000000000
................................................................................AT---CAA-A----------CGGATTTATC--------------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1630.67200000000002000000
droSec2
CAAGAGTTCAA---CCAGAGCGCAA-C-C------------CAAAAA--CCC-A-C-AAACAGCAACATGAAAGTGAGTTAT---CAA-A----------CGGATTTATC--------------------------------------CTGATAA--TT--------------------------------------------AACAGCAAT--------ATA---GCATGGATTGAGCA---------------------------TAATATT---------AGTAATTCAACAAGGA-----AGTTTTAA---TCCTAAGACTCCACGA-------------------------TCCTAAA----------GCAATTTCGTTT---TATA--------------------------------------------------------------------------------------------------------------------------------------------------A-------------------T--TCCTC--------TAAAACTAATA------------------------------------------------------------------------AAACAATATCTTTTGC-ATTTTACAGTTCGCCGTCGCCGTTATCTTCACCTTGGCCCTCGCCATGGGCGTGCAGTCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
CAAGAGTTCAA---CCAGAGCGCAA-C-C------------CAAA-A--CCC-A-C-AAACAGCACCATGAAAGTGAGTTAT---CAA-A----------CGGATTTATC--------------------------------------CTGATAA--TT--------------------------------------------AACAACAAC--------ATA---GCTTGGAT---------------------------------TAATATT---------AGTAATTCAACAAGGA-----AGTTTTAC---TC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAG--------ACTAAACAATATATTTTGC-ATTATACAGTTCGCCGTCGCCGTTATCTTCACCTTGGCCCTCGCCATGGGCGTGCAGTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
CAAGAGTTCAA---CCAGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000
..AGAGTTCAA---CCAGAGCGCAA-C-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..AGAGTTCAA---CCAGAGCGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.........AA---CCAGAGCGCAA-C-C------------CAAA-A--CCC-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CAA---CCAGAGCGCAA-C-C------------CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000
....AGTTCAA---CCAGAGCGCAA-C-C------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000
..AGAGTTCAA---CCAGAGCGCAA-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000
..........A---CCAGAGCGCAA-C-C------------CAAA-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000
.......TCAA---CCAGAGCGCAA-C-C------------C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CAAGAGTTCAA---CCAGAGCGCAA-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CCAGAGCGCAA-C-C------------CAAA-A--CCC-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
......TTCAA---CCAGAGCGCAA-C-C------------CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.....................................................A-C-AAACAGCACCATGAAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........A---CCAGAGCGCAA-C-C------------CAAA-A--CCC-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.......TCAA---CCAGAGCGCAA-C-C------------CAAA-A--............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.AAGAGTTCAA---CCAGAGCGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...............CAGAGCGCAA-C-C------------CAAA-A--C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CAAGAGTTCAA---CCAGAGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....................CGCAA-C-C------------CAAA-A--CCC-A-C-A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AGTTCAA---CCAGAGCGCAA-C-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.......TCAA---CCAGAGCGCAA-C-C------------CAAA-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CAAGAGTTCAA---CCAGAGCGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........AA---CCAGAGCGCAA-C-C------------CAAA-A--............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
CAAGAGTTCAA---CCAGAGCGCAA-C-C------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AGAGCGCAA-C-C------------CAAA-A--CCC-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GAGTTCAA---CCAGAGCGCAA-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGCCCTCGCCATGGGCGT......2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000
......TTCAA---CCAGAGCGCAA-C-C------------C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....GTTCAA---CCAGAGCGCAA-C-C------------CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....AGTTCAA---CCAGAGCGCAA-C-C------------C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........A---CCAGAGCGCAA-C-C------------CAAA-A--CCC-T-......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GTTCAA---CCAGAGCGCAA-C-C------------C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....AGTTCAA---CCAGAGCGCAA-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........A---CCAGAGCGCAA-C-C------------CAAA-A--CC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........CAA---CCAGAGCGCAA-C-C------------CAAA-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.AAGAGTTCAA---CCAGAGCGCAA-C-C------------CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGCCCTCGCCATGGGCGTGCA...2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCGCCATGGGCGTGCA...1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCCGTCGCCGTTATCT...............................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGCCCTCGCCATGGGCGT......2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CAAGAGTTCAA---CCAGAGCGCAA-C-C------------CAAA-A--CCC-A-C-AAACAGCACCATGAAAGTGAGTTAT---TAA-A----------CATAAATATC--------------------------------------CTGATAG--TT--------------------------------------------GTCAAAAAC--------GCA-GCGCATGGATTGAGCC------------------------------------------------TTCAACAAGGA-----AGTTGTAA---CCC-A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACAA-ACTTTTCGC-ATTTAACAGTTCGCCGTCGCCGTTATCTTCACTTTGGCCCTCGCCATGGGCGTGCAGTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
CAAGAGTTCAA---CCAGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1816.0061000050
.......TCAA---CCAGAGCGCAA-C-C------------CAAA-A--............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.0040000220
CAAGAGTTCAA---CCAGAGCGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000020
..........A---CCAGAGCGCAA-C-C------------CAAA-A--............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020010100
..AGAGTTCAA---CCAGAGCGCAA-C-C------------CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
.......TCAA---CCAGAGCGCAA-C-C------------CA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
...............CAGAGCGCAA-C-C------------CAAA-A--CC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
......TTCAA---CCAGAGCGCAA-C-C------------CAAA-A--............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
..............CCAGAGCGCAA-C-C------------CAAA-A--CC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
....AGTTCAA---CCAGAGCGCAA-C-C------------CAAA-A--............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
droYak3
CAAGAGTTCAA---CCAGAGCGCAA-A-C------------CAAA-A--CCC-A-C-AAACAGCACCATGAAAGTGAGTTAT---CAA-A----------CGGATTTATC--------------------------------------CTGCTAG--TT--------------------------------------------AACCAAAAC--------ATAAAAGCATTGAT---------------------------------------T---------AGTAATTCTTCAAGGA-----AGTTTGGG---TTCCAAGACTTCAAGA-------------------------TCCTAAATCCAATCAAAGAAATCAAGTTTACATAAAATTCTTTTACAAG-----------CT--------------------------------------------------------------------------------TA------------AAGTACGAAT-----------------------------------ATTAAACTT--------AAAAACTAACT------------------------------------------------------------------------AAATAAAACA-TTTG--ATTTAACAGTTCGCCGTCGCCGTTATCTTCACTTTGGCCCTCGCCATGGGCGTGCAGTCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......TTCAA---CCAGAGCGCAA-A-C------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
..............CCAGAGCGCAA-A-C------------CAAA-A--CC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
......TTCAA---CCAGAGCGCAA-A-C------------CAAA-A--CC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.........................................................AAACAGCACCATGAAAGTGAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCCGTCGCCGTTATC................................1811.00110000000000
droEug1
CAAGAGTTCAA---TCCGAGCGCAA-C-C------------CAAA-A--CCC-A-C-AACCAGCACCATGAAAGTGAGTTAA---AAA-C----------AGGGTTTATCCTTATCATAAAAGAGTTTAGGGATCTGGCAGAAATACCA-------------------------------------------------------------------------------------------TGACAGATGTTAACTCTTTTAATGGATTAAACTGAAAAAGATC------------------------------------------------------------GT-------------------------------------------------------------------TAACCGATCT---------------------------------------------------------------------------G--------------AAG----------------------------------------------------TAAACTA-AAAACT-----------------------------------------------------------AATTCGAACTC--------CCA--------ATA-TTTCTTCAGTTCGCCGTCGCCGTTGTCTTCACCTTGGCCCTCGCCATGGGCGTGCAGTCSizeHit CountTotal NormTotal
No Reads
droBia1
CAAGAGTTCAA---TCCGAGCGCAA-C-C------------CAAA-A--CCC-A-C-AATCAGCATCATGAAAGTGAGTTAT---TAA-A----------CGGAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
T------TCAACAACCCAACTTCAA-A-A------------CCCA-C--CCC-A-A-AACCATCAACATGAAGGTGAGGTGATATCAGCA----------AGGA-CTATTCTG-----AAAATATTTTCAGAATTTATC---------AAAATAA--TT--------------------------------------------AAGAAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCTAAAAAGAA---------------TTCAGAAACATTCGAAAAACTTTTGAAAA------------------------------------------------------TTTAT-----------------A---------AA----------------------------AGAGTTTAATCCTAGAACCTT-GTAAGT-----------------------------------------------------------AATTGACATT-------------CCTATTTG---GTCTTTCAGTTCGCCGTTGCCGTAGTC---ATGTTCGTGTGCGCCCTGGCTGGA-----SizeHit CountTotal NormTotal
No Reads
droEle1
CAAGAGTTCAA---TCAGAGCGCAA-C-C------------CAAA-A--CCC-A-C-AATCAGCACCATGAAAGTGAGTTAT---CAA-A----------GGGATTTATC--------------------------------------CTGATTC--TTA--AAGCT--AAGCTTAAACAAT--AACG-------------TTAA--------------------A-----------------------------------------------------GTTTAG-AATTCTTAAAAAATAAAGTGTTCGGGCTTTTGTAAATCTTCAAGCTTGCCAACTGTTGTA-CAATTAT----------CCATTGCAGGAAAAT---TTTAAATAAAA------------------------------------------------------T----------------A----------------GGAT------TTTAAGTTA------------AAGTAAGTCT-------------------------------------------------------AACTAATTAA-----------------------------------------------ATAAATTTTAAA----A-TTTTA-------------TTC-TCATCCCAGTTCGCCGTCGCCGTTGTCTTCACCTTGGCCCTCGCCATGGGCGTGCAGTCSizeHit CountTotal NormTotal
No Reads
droRho1
CAAGAGTTCAA---TCAGAGCGCAA-C-C------------CAAA-A--CCC-A-A-AACCAACAACATGAAAGTGAGTTAT---CAA-A----------TGGATTTATC--------------------------------------CTGATTAGGTTA--TAGCTCCGAGCTATAACAAT--AAAG-------------TTAAAAAAGA-GTAACTCA----GCTC-----------------------------TTAAATGGATTAAACTTCAAACGTTT------------------------------------------------------------GTATCAATTAACATCCTAAA----------GAAATTTC---C--------------------------------------------------------TAATTAC----------------AGGATTTTTAATCCTGGGGAT------GC---TG--------------ATGTAATCCT-------------------------------------------------------AACTAATTAAACAATGGGATGAAAAATATTATAAAGTTTGAAAGC----TATTA-------ATATTAAA----AATGGTT-------------TTA-CTATTGCAGTTCGCCGTCGCCGTTGTCTTCACCTTGGCCCTCGCCATGGGCGTGCAGTCSizeHit CountTotal NormTotal
No Reads
droFic1
CAAGAGTTCAA---ACAGAGCGCAA-C-C------------CCAA-A--CCC-A-C-AATCAGCACCATGAAAGTGAGTTAT---CAACA----------AGGATTCATC--------------------------------------CTGAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CAAGAGTTCAA---CAAGAGCGCCAAC-C------------CAAA-AAATCC-A-CCTCCAAGCATCATGAAAGTGAGTTAGCT-TAC-A----------AGGATAAAGC--------------------------------------CTGATCC--TTTTA----T------TATAACATTATAAAGTCTAAAGAAACAATTAAA--------------------------------AAAGTTAAAGAA----------------------------------------------------------------------------------------------------------------------------------------------TTTATTCTGCAAGAAAATACGATATTCTGGAAAAACTCTT--------------------------------T----------------GGAT------TTTAA-----------------A---------CT----------------------------CTATTTTATATTTAAAAAATTAAGAAAT-----------------------------------------------------------AATTAATTTT-------------TATTTTTTGC-CTTCTTCAGTTCGCCGTCGCTATTGTCCTCACCCTGGCCCTGGCCATGGGCGTCCAGTCSizeHit CountTotal NormTotal
No Reads
droAna3
CAAGAGTTCAC---CAAGAGCACCA------------------AA-C--CAA-A-C-AACCAGCAACATGAAAGTGAGTCCT---CAC-AAAAAAATATAAGGATT-ATCTTC-----------------------------------CTGATCC--TTTGC----C--------------------------------------------------------------------------------------------AAGTGGATTAAAATTAAAAAGACT------------------------------------------------------------G------------------------------------------------------------------------------AAATCCCTAAAAAAATATATAAACAAAAAATCTTTACAACCAA----------------GGAT------TCTAAGTGA------------AAAT--TCCCAAACAAAAAAACCCAAAA--------------------------------------------------------------------------------GCATAATTTTA-------ATAATAAA----A-T------------TC---TTT-AATTTTCAGTTCGCCATCGCCGTTGTCTTCACTCTGGCCCTCGCCATGGGCGTCCAGTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......TTCAC---CAAGAGCACCA------------------AA-C--C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
CAAGAGTTCAC---CAAGAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
CAAGAGTTCAC---CAAGAGCACCA------------------A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
.......TCAC---CAAGAGCACCA------------------AA-C--CAA-A-C-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000100
CAAGAGTTCAC---CAAGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAAAAAACCCAAAA--------------------------------------------------------------------------------G................................................................................................................1811.001010000
droBip1
CAAGAGTTCAC---CAAGAGCACCA-A-C------------C-------CAA-A-C-AATCAGCAACATGAAAGTGAGTCCT---TAC-AAAAGAATATAAGGATT-ACTTTT-----------------------------------GTGATCC--TTTGG----C--------------------------------------------------------------------------------------------AAGTGGATAAGACTTAGAAAA----------------------------------------------------------------------------------------------------AGTTTAAAAGAAGTCCTTTTACAAG-----------TTTTGGATATCCCTATGAAAATTTATTAACAAGAAAGCTTTACCAACAA----------------GGG-------TCTAAGTGA------------AAAA--TCCGAA----AAAGAACCAAAAGTTTTCTTAAATTTT-------------------------------------------------ATTATAATTTTTGTGAGTATAATTTATGAAATATATT--------CC-------------------CTA-ATATTTCAGTTCGCCATCGCCGTTGTCTTCACTCTGGCCCTCGCCATGGGCGTGCAGTCSizeHit CountTotal NormTotal
No Reads
dp5
CAAGAGTTCAA---CAAGAGCGCTA-C-C------------AAAA-C--CCAAA-C-CAACAGCAAAATGAAAGTGAGTTTA----GG-T----------CGGG--------------------------------------------------------------------------------------------------------------------------------------ACTGCCACACGGCGAATCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--------------TG-----------------------------------------------------------------CT-----------------------------------------------------------AATCCG--------GCT-------------GTC-CTTTTCCAGTTCGCCATCGCCGTTGTCTTCACTCTGGCCCTTGCCATGGGCGTCCAGTCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
CAAGAGTTCAA---CAAGAGCGCTA-C-C------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020002000000
CAAGAGTTCAA---CAAGAGCGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
...GAGTTCAA---CAAGAGCGCTA-C-C------------AAAC-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001000000
.........AA---CAAGAGCGCTA-C-C------------AAAC-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTCTTCACTCTGGCCCTTG................2211.0010100000000
..AGAGTTCAA---CAAGAGCGCTA-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010000
CAAGAGTTCAA---CAAGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001000000
.........................................AAAA-C--CCAAA-C-CAACAGCAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010000
....AGTTCAA---CAAGAGCGCTA-C-C------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010000
.........AA---CAAGAGCGCTA-C-C------------AAAA-C--CCAAA-C-C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010001000000
...GAGTTCAA---CAAGAGCGCTA-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010000
..AGAGTTCAA---CAAGAGCGCTA-C-C------------A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010000
CAAGAGTTCAA---CAAGAGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTGGCCCTTGCCATGGGCGT......2311.0010000010000
.AAGAGTTCAA---CAAGAGCGCTA-C-C------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010000
droPer2
CAAGAGTTCAA---CAAGAGCGCTA-C-CAAAC--------CCAAAC--CCAAA-C-CAACAGCAAAATGAAAGTGAGTTTG----GG-T----------CGGG--------------------------------------------------------------------------------------------------------------------------------------ACTGCCACACGGCGAATCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--------------TG-----------------------------------------------------------------CT-----------------------------------------------------------AATCCG--------GCT-------------ATC-CTTTTCCAGTTCGCCATCGCCGTTGTCTTCACTGTGGCCCTTGCCATGGGCGTCCAGTCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
CAAGAGTTCAA---CAAGAGCGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003000030
CAAGAGTTCAA---CAAGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002000020
.AAGAGTTCAA---CAAGAGCGCTA-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
.......TCAA---CAAGAGCGCTA-C-CAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
CAAGAGTTCAA---CAAGAGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000100
droWil2
CAAGAGTTCAT---TCAGAGCGACCAACC------------AACA-A--CCA-A-A-CCAAATCAAAATGAAAGTGAGTTTT---CTA-T----------TGGA--------------------------------------------------------------------------------------------------------------------------------------AAAGTCAAAGAGGTTATCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--------------T------------------------------------------------------------------CT-----------------------------------------------------------TATCC---TT-------------CATCGTTTGACTACTTTCAGTTCGCCCTCGCTATTGTCTTCAGCCTGGCCCTTGCCATGGGAGTGCAGTCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........CAT---TCAGAGCGACCAACC------------AA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00220000
CAAGAGTTCAT---TCAGAGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001
..........T---TCAGAGCGACCAACC------------AACA-A--C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCC---TT-------------CATCGTTTGACTACTTTCAG..................................................2611.00100001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGCCCTTGCCATGGGAGTGC....2211.00100001
CAAGAGTTCAT---TCAGAGCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
...............CAGAGCGACCAACC------------AACA-A--CCA-A-A-CCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110000
......TTCAT---TCAGAGCGACCAACC------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100001
...............CAGAGCGACCAACC------------AACA-A--CC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001
.........AT---TCAGAGCGACCAACC------------AACA-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
..........T---TCAGAGCGACCAACC------------AACA-A--CC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
.AAGAGTTCAT---TCAGAGCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000
........CAT---TCAGAGCGACCAACC------------AACA-A--CCA-A-A-C...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00110000
..............TCAGAGCGACCAACC------------AAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
........CAT---TCAGAGCGACCAACC------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCC---TT-------------CATCGTTTGACTACTTTCA...................................................2411.00100001
.....GTTCAT---TCAGAGCGACCAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
......TTCAT---TCAGAGCGACCAACC------------AA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100001
......TTCAT---TCAGAGCGACCAACC------------AACA-A--C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000
...............CAGAGCGACCAACC------------AACA-A--CCA-........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGCCCTTGCCATGGGAGT......2011.00100001
droVir3
CAAGAGTTCAT---TAAGAGCACAA-C-A------------AAGC-A--AAC-A-C-AATTAGCAAAATGAAAGTGAGTATC---CGC-G----------GGGATTTG-----------------------------------------CGAT-------------------------------------------------------------------CTA---GCCAGGAT---------------------------------TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACAT-----------------------ACA-TATTTCCAGTTCGCCATCGCTGTTGTCTTCACCCTGGCCCTCGCCATGGGCGTGCAGTCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCACCCTGGCCCTCGCCATGGG.........2412.002000000000000002000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGTTGTCTTCACCCTGGCCC...................2312.002200000000000000000000000000000000000000000000000000000000000000
CAAGAGTTCAT---TAAGAGCACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000001000000000000000000000000000000000000000000000100
..............................................A--AAC-A-C-AATTAGCAAAATGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGCTGTTGTCTTCACC..........................1911.001000000000000001000000000000000000000000000000000000000000000000
CAAGAGTTCAT---TAAGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000100
........CAT---TAAGAGCACAA-C-A------------AAGC-A--AAC-A-C-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000001000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGCCCTCGCCATGGGCGTGCA...2311.001000000000000001000000000000000000000000000000000000000000000000
............................A------------AAGC-A--AAC-A-C-AATTAGCAAAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
.........AT---TAAGAGCACAA-C-A------------AAGC-A--AAC-A-C-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000001000000000000000000000000000000000000000000000000
.........AT---TAAGAGCACAA-C-A------------AAGC-A--............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
..AGAGTTCAT---TAAGAGCACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
..AGAGTTCAT---TAAGAGCACAA-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
..................................................AC-A-C-AATTAGCAAAATGAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
........CAT---TAAGAGCACAA-C-A------------AAGC-A--............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGCCATCGCTGTTGTCT...............................1911.001000000000000001000000000000000000000000000000000000000000000000
CAAGAGTTCAT---TAAGAGCACAA-C-A------------AAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000100
droMoj3
CAAGAGTTCAA---GCCGAGCGCAA-C-C------------AAGC-A--AAAAACC-AATTAGCAAAATGAAAGTGAGTA-T---TGG-A----------AGGATC------------------------------------------GCAATCC--TTT-------------------------------------------------------------------------------------------------------------------------------------CGAGGA------------------------CTCG-------C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT-----------------------------------------------------------AACAGATATT-------------TATGTTTCG----CCTGCAGTTCGCCATCGCTGTCGTCTTCACCCTGGCCCTGTCCATGGGCGTGCAGTCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......TCAA---GCCGAGCGCAA-C-C------------AAGC-A--A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
CAAGAGTTCAA---GCCGAGCGCAA-C-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
droGri2
CAAGAGTTCAA---CAAGAGTGCTA-C-CAAGCAACAAAACCAAC-A--AAC-A-A-AACCAGCAAAATGAAAGTGAGTA-T---CCA-A----------AGGATCTCTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTGCAGATAAGGAGTATTCATGTCAATATTAATGCTA-----------------------------------------------------------------CT-----------------------------------------------------------AATTC--------------------CCTTTTGA-TGTTTGCAGTTCGCCATCGCCGTCGTCTTTACTCTGGCCCTTGCCATGGGCGTGCAGTCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................................AAC-A--AAC-A-A-AACCAGCAAAATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110
.....GTTCAA---CAAGAGTGCTA-C-CAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101
....AGTTCAA---CAAGAGTGCTA-C-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101

Generated: 05/19/2015 at 11:23 AM