ID:

dsi_6932

 Coordinate:

3r:369515-369789 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.0 -14.8 -14.8

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

TTTTTCGTAGGATCCACAATCTCCCATAGTTTATTTTATTTTATTATTTTTGGAGGTGTTTAGCCCGTAGGCGTATTTTTCAATATGAATCGGCGTTTTATGTATCCTTAGAAGATTCTGCCTCGGCTCAATGACCGAAAAAAATCGTATTTTATTGAAGTTTGACTAGAAAAACAGATATATAATATCATTTTTTACAGCTATTTTTAAAAACGTCTAAGGAGCCTACAACTAGCACAAAGCTCAGCCAAGTAGTTTTCTCCCTTGAGGGTAAATGAATTTAAATTGTTTTCATTTTTAAATAAATACCCTTTTTATTTAATAGAATAAGAATATATTATGGAAAACAGTGAACTGGAAAAAGCGAGTGCAGTG
**************************************************.......(((.(((.((.(((((...(((((.(((((((.......))))))).......)))))...)))))))))).))).************************************************************************************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902008
ovaries
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 O001
Testis
..................................................TGGAGGTGTTTAGCCCGTAGGCGTA............................................................................................................................................................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................TATTATGGAAAACAGTGAACT................... 21 0 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................TATATTATGGAAAACAGTGAACTGGAAA.............. 28 0 1 1.00 1 0 0 0 0 1 0 0
...........................................................................................................TTAGAAGATTCTGCCTCGGCTCAATG.................................................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................................TCAGCCAAGTAGTTTTCTCCCTTGAGGG........................................................................................................ 28 0 1 1.00 1 0 0 0 1 0 0 0
............................................................................TTTTCAATATGAATCGGCGTTT..................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................TATATTATGGAAAACAGTGAACTGGA................ 26 0 1 1.00 1 0 0 1 0 0 0 0
.....................................................................................TGTATCGGCGTCTTATGTA............................................................................................................................................................................................................................................................................... 19 2 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................................................................................................TTTTAAAAACGTCTAAGGAGC...................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0
...........................................................................................................TTAGAAGATTCTGCCTCGGCTCAATGAC................................................................................................................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0
.............................................ATTTTTGGAGGTGTTTAGCCCGTAGG................................................................................................................................................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0
...........................................................................TTTTTCAATATGAATCGGCGTTTTA................................................................................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................AATGTATCGGCGTCTTATGT................................................................................................................................................................................................................................................................................ 20 3 4 0.25 1 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................AGGGTAAAAGAATCTAAA.......................................................................................... 18 2 18 0.11 2 0 0 0 2 0 0 0
...................................................................................................................................................TATATTATCGAAGTTTGACG................................................................................................................................................................................................................ 20 3 9 0.11 1 0 0 1 0 0 0 0
............................................................................................................................TGCTCAATGATCGAAAATAAT...................................................................................................................................................................................................................................... 21 3 13 0.08 1 0 0 0 0 0 1 0
..................................................................................................TATGTCCCCTTAGAATATT.................................................................................................................................................................................................................................................................. 19 3 18 0.06 1 0 0 0 0 1 0 0
...............................................................................................................................................................................................................................................................................................................AAATACCCTTTTTATATAGCA................................................... 21 3 18 0.06 1 0 0 0 0 0 0 1
...........................................................................................................................................................TGAAGTTTGAATAGAAAAAAAA...................................................................................................................................................................................................... 22 3 19 0.05 1 0 0 1 0 0 0 0
.................................................................................................................................................................TTGACTAGAAAAACT....................................................................................................................................................................................................... 15 1 20 0.05 1 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................................................................................TGTGTTCATTTTTAAA......................................................................... 16 1 20 0.05 1 0 0 0 0 1 0 0
......................................................................................................................................................TTTATTGGAGTTTGA.................................................................................................................................................................................................................. 15 1 20 0.05 1 0 0 0 0 0 1 0

Anti-sense strand reads

AAAAAGCATCCTAGGTGTTAGAGGGTATCAAATAAAATAAAATAATAAAAACCTCCACAAATCGGGCATCCGCATAAAAAGTTATACTTAGCCGCAAAATACATAGGAATCTTCTAAGACGGAGCCGAGTTACTGGCTTTTTTTAGCATAAAATAACTTCAAACTGATCTTTTTGTCTATATATTATAGTAAAAAATGTCGATAAAAATTTTTGCAGATTCCTCGGATGTTGATCGTGTTTCGAGTCGGTTCATCAAAAGAGGGAACTCCCATTTACTTAAATTTAACAAAAGTAAAAATTTATTTATGGGAAAAATAAATTATCTTATTCTTATATAATACCTTTTGTCACTTGACCTTTTTCGCTCACGTCAC
**************************************************************************************************************************************************************************************************************************************************.......(((.(((.((.(((((...(((((.(((((((.......))))))).......)))))...)))))))))).))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 M053
female body
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR902009
testis
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
AAAAAGCATCCTAGGTGTTAGAGG............................................................................................................................................................................................................................................................................................................................................................... 24 0 1 2.00 2 0 2 0 0 0 0 0 0
...............................................................................................................................AGTTACTGGCTTTTTTTAGCATAAAAT............................................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................CCCACAAATCAGGCATCCGCACAAAAAGT..................................................................................................................................................................................................................................................................................................... 29 3 1 1.00 1 0 0 1 0 0 0 0 0
...................................................................................TTACATAGCCGCAGAATACA................................................................................................................................................................................................................................................................................ 20 3 4 1.00 4 0 3 0 0 0 1 0 0
.......................................................................................................................................................................................................................AGATTCCTCGGATGTTGATCGTGTT....................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................CTCCACAAATCAGGCATCC................................................................................................................................................................................................................................................................................................................ 19 1 1 1.00 1 0 0 1 0 0 0 0 0
................................................................................................................................................AGCATAAAATAACTTCAAACTGATCTTTT.......................................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0
....................................................................................................................................................................................ATATTATAGTAAAAAATGTCGAT............................................................................................................................................................................ 23 0 1 1.00 1 0 0 0 1 0 0 0 0
.........................................................................................AGCCGGAGAATACAGAGGAA.......................................................................................................................................................................................................................................................................... 20 3 3 0.33 1 0 0 0 0 1 0 0 0
...............................................................................................AAAATACAGAGGAAT......................................................................................................................................................................................................................................................................... 15 1 20 0.25 5 4 0 0 0 0 0 0 1
.................................................................................................................CTAAGACCGCGCCGAGTT.................................................................................................................................................................................................................................................... 18 2 6 0.17 1 0 0 0 1 0 0 0 0
.......................................................................................................TAGGAATCGTCTAAG................................................................................................................................................................................................................................................................. 15 1 8 0.13 1 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................................TAAAAATGCTTGAAGATTCCT........................................................................................................................................................ 21 3 9 0.11 1 0 0 0 0 0 0 1 0
............................................................................................................................................................................TTGTTTATATATTATAG.......................................................................................................................................................................................... 17 1 14 0.07 1 0 0 0 0 1 0 0 0
............................................................................................................................................................................................................................................................................................TTACAAGAGTAAAAATTTAGT...................................................................... 21 3 17 0.06 1 0 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:369465-369839 + dsi_6932 TTTTTCGTAGGATCCACAATCT----------CCCAT-AGTTTAT-TTTATTTT------ATTATT------------------------TTTGGAGGTGTTTAGCCCGTAGGCGTATTTTTCAATATGAATCG-------------------GCGTTTTA---T-GTATCCTTAGAAGATTC---T----GCCTCGGCTCAAT-GACCGAAAAA-A-AT-CGTATTTTATTGAAG-TTTGACTAGAA--------AA-A------CAGAT---ATA--------------TAATAT--CATTTTTTACAG--CTATTTTT-----------------------AAAA-------ACGTCTAAGGAGCCTACAACTAGCAC--------AAAGCTCAGCCAAGTAGTTTTCTCCCTTGAGGGTAAATGAA---------TTTAAATTGTT---------TTCATTTTTAAAT--AAATACCCTTTTTATTTAATAGAATAAGAATATATTATGGAAAACA-------------GTGAACTGG-----------------AAAAAGCGAG---------------TGCAGT---G
droSec2 scaffold_6:525578-525927 + TTTTTCGTAGGATCCACAATCT----------CCCAT-AGTTTAT-TTTATTTT------ATTATT------------------------TTTGGAGGTGTTTAGCCCGTACGCGTATTTTTTAATATGAATCG-------------------GCGTTTTA---T-GTATCCTTAGAAGATTC---T----GCCTCGGCTCAAT-GACCGAAAAA-A-AT-CGTATTTTATTGAAG-TTTAACTAGAA--------AA-A------CAGATATTATA--------------TAATAT--CATTTTTTACAG--CTATTTTT-----------------------AAAA-------ACGTCTAAAGAGCCTACAACTAGCAC--------AAAGCACAGCCAAGTAGTTTTCTCCCTTGAGGGTAAATGAA---------TTTAAATTGTT---------TTCATTTTTAAAT--AAATACCCTTTTTTTC----------------------------CA-------------GTGTACTGG-----------------AAAAAGCGAG---------------ACCAGT---G
dm3 chr3R:420111-420459 + TTG-----------------------------------------------------------------------------------------TGGAGGTGTTTAGCCCGTAGGCGTATTTCTCAATATGAATCGGGCATACC-TTAAACAACGGCGTTTTA---G-GTATCTTTAAAAGATTCACCT----GGATCGGTTTCGT-GACCGAAAAA-T-AG-AGTATTTTATTGAAT-T---AAAAAAA--------AA-A------CAGATAATATA--------------TAATAT--AGTTATTTTAAG--TTGTTTTT-----------------------GAAA-------ACGTCTGCAGAGCCTACAACCAGCAC--------AAAGCTCAGCCAAGTGGTTTTATACCTTGAGGGTAAATGAA---------TTTAAATTGTT---------TTCATTTTTAAAT--CAATACCACTTCTATTTAATGGAAGAAGAATTTGCTATGGAAAAAA-------------GTGTGGATG-----------------AAAAAGCGAT---------------TCCACT---G
droEre2 scaffold_4770:62043-62324 + TTTTTTAATG---------------------------------------------------------------------------------------------------------------------TGAGTCG-------------------CTTTTTGT---T-GTGAACTTT------------------------TTAGT-G----GTAAGCAAAT-TATTT-TTTCTGATACTTT-TATGATA--------AA-G------CCTATAATAAT--------------TAATA-----ATTTTAATAG--TTATTTGT-----------------------GAAG-------AAGTATGCAGAGCACACAACCAGCAT--------TAAGCTCAGCCAAATGC---TCTCTCTTGTTGGTAAATGAACCGAATAAAATCAAATCTAT---------TTCATTTTTATAT--TAATACAATTTTAATTTAATAGAAGACCAATTTGTTATGGAAGCCT-------------GCCC-----------------ATAGAAGG---------TA----------CCACATG---T
droYak3 v2_chrUn_2999:3288-3668 - TTTTTCGTAGGGTTTACATTCT----------CCCTT-TGTTAAT-TTTATTTAAA----TTTTAC------------------------TTTGGAGGTGTTTAGTCCGTAGGCGTATTTTTCAATATGAATCGGGCATACC-TTAAACGACGGCGTTTAA---G-GTATCTTTAGAAGATTCACCT----GCCTCGGTTCGAT-GACCGAAAAA-A-AA-AGTATTTAATTAAAG-TATAACAAGAA--------AA-A------CAGATAAAATA--------------CAATAT--CATTTTTTATAG--TTCTTT-------------------------TAAG-------ATGTCTGAAGAGCCGACCACTAGCCA--------AAAGCTCACCCAATTTGTTTTCTCCCTTAAGGGTAAGTGAACCATATAAAATGTTATTGCA---------GTCATTTTTATAT--AAGTACAATTTCTATTTAATGGAAA------------------CCC----------GGC-------------A------------ACC---------CC----------CGACAAT---A
droTak1 scf7180000415866:24333-24482 - TTTCTCGTAGGTTTT-TTT-----------------------------------A-----ATCTAA------------------------ATGGGAGGTGTTTAGTCCGTAAGCGC--TAAAAAATACGAATCGGGCATGTA-TTTAGCGACGGCGCTCTA---T-ATATCTTTAGAAGATTCACCT----ACC-CGGTTCGAA-AACCGAAAAA-A-AA-TGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---------TTCATT---------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000490523:7226-7616 - TTTTTCGTAT---------TCT----------CCCTT-TGTTTAT-TTTATTTTGA----ATTTTT------------------------TTCACATGTGTTTAGTCCGTAGGCGTATTTTTCAATACGAATCGGGCATGAC-TTAATCGAAGGCGTTATA---G-GTATCTTTATAAGATTCACTT----GCCATGGTTCAAT-GACCAAAAAATA-AA-TGTATTTTATTGAAA-TTAAATAA--AA-------AA-CT-----CATTTAATTAT--------------TTATAT---ATTTAATATAG--C-ATT--------------------------TAG-------GAAGAT---GGCA--A-CC--CCTAATAAAATTCAAAAGC---------TCATTTTCTCCTTGGATGGTAATTAAGCCAAATAAAATCTAATTAAT---------TCAATTTTTATAT--TAATAT---------TTCTTAGAAGACGATTTTGTGACGGAAACCC----------CGC-------------A-------A-AA-AAACTGCGATC-CCTTACCAAAATCCCTACC---A
droRho1 scf7180000763402:234-431 - TATT-GGTAG------------------------------TTTAT-TT----TTT-----ATTTTT---TG----------------AGAATGGGGGGTGTTTAGTCCGTAGGCAT--TTAAAAAAATGAATCAGGCATATT-TAAAGCGACGGCGCTTTA---A-ATATCTTTAGAAGATTCACCT----ACCCTGGTTCGAA-AACCTAAAAAAA-A-ACAC------------------------TACTTTTTA----TT---------------------------------------------------TATTTTA-----------------------TAAA-------ATAT-------------------------------------------------------------------------------------------------------------TTATTAAAATTATTT------GTTATAG--------------------------------------------------------------------------------------------------
droFic1 scf7180000449254:1560-1830 - CTTTTCTTAGGGATT-TTT-----------------------------------------AGGA-T------------------------TTTTGAGGTGTTTAGTCCGTAGGCGTAATT-TAATTACGAATCGGGCATATT-TAAAGCGACGGCGCTTTAAATAAATATCTTTTGAAGATTCACCT----TCCATGGTTCGAA-AACCAAAAAA-A-AAAAAA------------------------A----TTAG----AAAGT-----------------------------TT--CAATTTATAAAA--CAATGATTTTAATTATGTTCTTTTTATTTACTT------AGAATGTC---GGAGCCA-CC--ACT--AAAAAT---------TAGGCGGATTGACTTTTGCCAA---GT----------------------------------------------------------------------------------------------------------------------------T------G-----AGTAAG-----T-------------ATAAAT---T
droKik1 scf7180000301503:2923-3320 + TTTTTCGTAGGGTTT-TT--------------------TATTAAT-TTTATTC--------TTTTT------------------------TTCGGAGGTGTTTAGTCCGTAGGCGTATTTTTCAACATGAATCGGGCATACC-TTCAGCGACGGCGTTTAA---G-GTATCTTTAAAAGATTCACCT----TCCATGGTTCGAT-AACCAAAAAA---AA-CGTATTTTATTCAAA-TAAAAAAT-AA--------AAA--TAAGTCACAAAATCAA--------------TTATAT--A--TATTTTCAGATTTGTTTTT-----------------------TAATAGACTGGATGTC---GGAGCCA-----CAGAATAAAATTCAAAAGA---------GGGTGTACCATGTCGAACGTAAGTAAA----ATAAAATCTAATAAAATATATTAGTTTAATTTTCACAT--ATATTACTT------TTTTTAGGAGATGACTTTTTGGACGAATCCTTTGAAGCCCCGGC-------------A------G-----AGC---------CC----------CCTCAGA---A
droAna3 scaffold_12392:38426-38751 + TTATTCATAGGTTTTATTT--A----------GCATTCGGTTTTTTTTTATATAAATTTTTTTTTT---TG----------------AA-TACGGAGGTGTTTAGTCCGTAGGCGTATTTTCTAATACGAATCGGGCATGCC-CTTAGCGACGGCGCTTTG---G-GTATCT-AGGAAGATTCACCT----ACCATGGTTCGAA-GGT------------------ATCAATGTAT-CAATACAG-AT--------TA-A------TTTAAT-----TACAAAACATTAAAAAAA--------------AC--CTTTTTTT-----------------------TAGA-------ATGTC---GGACCAA-CC--CCCAAAA--------AAATTGAGGAAAGTTGTTTTCAACATGGACGGTAAACAAA---------TATAAAATAAT---------AATAATTAAGAAT--ATTTATGTTTATT---T------------------------------------------------------------------------------------------------------A
droBip1 scf7180000391758:363-749 + TTTTTCTTAGGGTTT-----TT----------CCCTT-TGTTAGT-TTTATTTTG-----ATTTTT------------------------TTCGGAGGTGTTTAGTCCGTAGGCATATTTTTAAATATTAATCGGGCATGTC-TCAAGCGACGGCGCTTAA---G-GCATCTTTAGAAGATTCACTT----TCCATTGTCCGTT-GAAAA-AAAA-A-AG-CGTATTTCATTAAAA-TAAAACAA-AT--------AA-A------CTTATAAAATGTACAAAAAA-----TTATGT--A--TTCTTT------TATTTTC-----------------------TAGA---TC-AAAGAT---GGAGCCT-----CAAAAAAAAATTTTAAAGA---------TGGCGTTTAATGTCGATGGTAAGTAAATTAAATAAAATC------------------TAATTTTTTTAT--TAATTTCTT------TTCTCAGATGAAGACCTAATTGCGGAGACGC-------------AAATGAGCGAGGTG------G-----AGATAG-----T-------------CGAGGT---G
dp5 XL_group1e:2830153-2830383 + TTCATCATTGTATTTAAAATGTATAATATATTCATTA-CCTAAAA-TTAGTACAG------ATTTT------------------------ACTGGGGGTGTTTAGTCCGTAGGCGTGTTTTTCAACATGAATCGGGCATGCCCTTTAGCGACGGCGTTAAA---GAGTATCTTAAGAAGATTCACCTATATACCATGGTCCGCAAAACCAAAAAA-A-AAAAAA------------------------A---------------------AAATATA--------------TA-TATATATATCTGTGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTATAC--AAAAACA----------------------------------------------------------------------------------------------------------------T
droPer2 scaffold_325:9807-9996 - TTTTCCATAGGTTTA-TTTGCT----------ACCTT-TACTTAT-TTTCATTTGT----AGTATTTTTTGCTTATTTTTAAATTCATAAAATGGAGGTGTTTAGTCCGTAGGCGTAATT-GAATTACGAATCGGGCATATC-TTTAGCGCCTGCGCTAAA---G-ATATCTTTGGAAGATTCACCG----GCCAGAGTCCGACAGACCAAAAAA-A-A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004887:566862-567057 - TATTTAGTAGGTTCCA---------------------------------------------TTTTC------------------------AATGGAGGTGTTTAGTCCGTAGGCATATTT-CCATTATGAATCGGGCATACC-TAATGCGACGGCGCATTA---G-GCATCTTTTGAAGATTCACCT----ACCATGGTTCGAA-TACCTAAAACAA-A-ACAA------------------------AATTCCTTG----TGTGT-----------------------------TT--CATT-----------------------------------ATTCA---------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------TGTGGAA-ATAGAAAT---------TA----------ATACATTTTTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTTTTCGTAGGATCCACAATCT----------CCCAT-AGTTTAT-TTTATTTT------ATTATT------------------------TTTGGAGGTGTTTAGCCCGTAGGCGTATTTTTCAATATGAATCG-------------------GCGTTTTA---T-GTATCCTTAGAAGATTC---T----GCCTCGGCTCAAT-GACCGAAAAA-A-AT-CGTATTTTATTGAAG-TTTGACTAGAA--------AA-A------CAGAT---ATA--------------TAATAT--CATTTTTTACAG--CTATTTTT-----------------------AAAA-------ACGTCTAAGGAGCCTACAACTAGCAC--------AAAGCTCAGCCAAGTAGTTTTCTCCCTTGAGGGTAAATGAA---------TTTAAATTGTT---------TTCATTTTTAAAT--AAATACCCTTTTTATTTAATAGAATAAGAATATATTATGGAAAACA-------------GTGAACTGG-----------------AAAAAGCGAG---------------TGCAGT---GSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................TGGAGGTGTTTAGCCCGTAGGCGTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTATGGAAAACA-------------GTGAACT......................................................2111.00100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTATGGAAAACA-------------GTGAACTGG-----------------AAA................................2811.00100000000010000000
............................................................................................................................................................................TTAGAAGATTC---T----GCCTCGGCTCAAT-G....................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................TCAGCCAAGTAGTTTTCTCCCTTGAGGG............................................................................................................................................................................2811.00100000000100000000
......................................................................................................................TTTTCAATATGAATCG-------------------GCGTTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTATGGAAAACA-------------GTGAACTGG-----------------A..................................2611.00100000001000000000
.............................................................................................................................................................................................................................................................................................................................TTTT-----------------------AAAA-------ACGTCTAAGGAGC..................................................................................................................................................................................................................................2111.00100000000001000000
............................................................................................................................................................................TTAGAAGATTC---T----GCCTCGGCTCAAT-GAC..................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000000010000
...............................................................ATT------------------------TTTGGAGGTGTTTAGCCCGTAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
.....................................................................................................................TTTTTCAATATGAATCG-------------------GCGTTTTA---..............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
..............................................................................................................................................................................................................................................TTGACTAGAA--------AA-A------CT......................................................................................................................................................................................................................................................................................................................................15200.05100000001000000000
droSec2
TTTTTCGTAGGATCCACAATCT----------CCCAT-AGTTTAT-TTTATTTT------ATTATT------------------------TTTGGAGGTGTTTAGCCCGTACGCGTATTTTTTAATATGAATCG-------------------GCGTTTTA---T-GTATCCTTAGAAGATTC---T----GCCTCGGCTCAAT-GACCGAAAAA-A-AT-CGTATTTTATTGAAG-TTTAACTAGAA--------AA-A------CAGATATTATA--------------TAATAT--CATTTTTTACAG--CTATTTTT-----------------------AAAA-------ACGTCTAAAGAGCCTACAACTAGCAC--------AAAGCACAGCCAAGTAGTTTTCTCCCTTGAGGGTAAATGAA---------TTTAAATTGTT---------TTCATTTTTAAAT--AAATACCCTTTTTTTC----------------------------CA-------------GTGTACTGG-----------------AAAAAGCGAG---------------ACCAGT---GSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
dm3
TTG-----------------------------------------------------------------------------------------TGGAGGTGTTTAGCCCGTAGGCGTATTTCTCAATATGAATCGGGCATACC-TTAAACAACGGCGTTTTA---G-GTATCTTTAAAAGATTCACCT----GGATCGGTTTCGT-GACCGAAAAA-T-AG-AGTATTTTATTGAAT-T---AAAAAAA--------AA-A------CAGATAATATA--------------TAATAT--AGTTATTTTAAG--TTGTTTTT-----------------------GAAA-------ACGTCTGCAGAGCCTACAACCAGCAC--------AAAGCTCAGCCAAGTGGTTTTATACCTTGAGGGTAAATGAA---------TTTAAATTGTT---------TTCATTTTTAAAT--CAATACCACTTCTATTTAATGGAAGAAGAATTTGCTATGGAAAAAA-------------GTGTGGATG-----------------AAAAAGCGAT---------------TCCACT---GSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTT---------TTCATTTTTAAAT--........................................................................................................................1821.5030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003
.................................................................................................................................................................................AGATTCACCT----GGATCGGTTTCGT-G....................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTGCTATGGAAAAAA-------------G............................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTAATGGAAGAAGAATTTGCTATG.................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
droEre2
TTTTTTAATG---------------------------------------------------------------------------------------------------------------------TGAGTCG-------------------CTTTTTGT---T-GTGAACTTT------------------------TTAGT-G----GTAAGCAAAT-TATTT-TTTCTGATACTTT-TATGATA--------AA-G------CCTATAATAAT--------------TAATA-----ATTTTAATAG--TTATTTGT-----------------------GAAG-------AAGTATGCAGAGCACACAACCAGCAT--------TAAGCTCAGCCAAATGC---TCTCTCTTGTTGGTAAATGAACCGAATAAAATCAAATCTAT---------TTCATTTTTATAT--TAATACAATTTTAATTTAATAGAAGACCAATTTGTTATGGAAGCCT-------------GCCC-----------------ATAGAAGG---------TA----------CCACATG---TSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
TTTTTCGTAGGGTTTACATTCT----------CCCTT-TGTTAAT-TTTATTTAAA----TTTTAC------------------------TTTGGAGGTGTTTAGTCCGTAGGCGTATTTTTCAATATGAATCGGGCATACC-TTAAACGACGGCGTTTAA---G-GTATCTTTAGAAGATTCACCT----GCCTCGGTTCGAT-GACCGAAAAA-A-AA-AGTATTTAATTAAAG-TATAACAAGAA--------AA-A------CAGATAAAATA--------------CAATAT--CATTTTTTATAG--TTCTTT-------------------------TAAG-------ATGTCTGAAGAGCCGACCACTAGCCA--------AAAGCTCACCCAATTTGTTTTCTCCCTTAAGGGTAAGTGAACCATATAAAATGTTATTGCA---------GTCATTTTTATAT--AAGTACAATTTCTATTTAATGGAAA------------------CCC----------GGC-------------A------------ACC---------CC----------CGACAAT---ASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droTak1
TTTCTCGTAGGTTTT-TTT-----------------------------------A-----ATCTAA------------------------ATGGGAGGTGTTTAGTCCGTAAGCGC--TAAAAAATACGAATCGGGCATGTA-TTTAGCGACGGCGCTCTA---T-ATATCTTTAGAAGATTCACCT----ACC-CGGTTCGAA-AACCGAAAAA-A-AA-TGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---------TTCATT---------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TTTTTCGTAT---------TCT----------CCCTT-TGTTTAT-TTTATTTTGA----ATTTTT------------------------TTCACATGTGTTTAGTCCGTAGGCGTATTTTTCAATACGAATCGGGCATGAC-TTAATCGAAGGCGTTATA---G-GTATCTTTATAAGATTCACTT----GCCATGGTTCAAT-GACCAAAAAATA-AA-TGTATTTTATTGAAA-TTAAATAA--AA-------AA-CT-----CATTTAATTAT--------------TTATAT---ATTTAATATAG--C-ATT--------------------------TAG-------GAAGAT---GGCA--A-CC--CCTAATAAAATTCAAAAGC---------TCATTTTCTCCTTGGATGGTAATTAAGCCAAATAAAATCTAATTAAT---------TCAATTTTTATAT--TAATAT---------TTCTTAGAAGACGATTTTGTGACGGAAACCC----------CGC-------------A-------A-AA-AAACTGCGATC-CCTTACCAAAATCCCTACC---ASizeHit CountTotal NormTotal
No Reads
droRho1
TATT-GGTAG------------------------------TTTAT-TT----TTT-----ATTTTT---TG----------------AGAATGGGGGGTGTTTAGTCCGTAGGCAT--TTAAAAAAATGAATCAGGCATATT-TAAAGCGACGGCGCTTTA---A-ATATCTTTAGAAGATTCACCT----ACCCTGGTTCGAA-AACCTAAAAAAA-A-ACAC------------------------TACTTTTTA----TT---------------------------------------------------TATTTTA-----------------------TAAA-------ATAT-------------------------------------------------------------------------------------------------------------TTATTAAAATTATTT------GTTATAG--------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CTTTTCTTAGGGATT-TTT-----------------------------------------AGGA-T------------------------TTTTGAGGTGTTTAGTCCGTAGGCGTAATT-TAATTACGAATCGGGCATATT-TAAAGCGACGGCGCTTTAAATAAATATCTTTTGAAGATTCACCT----TCCATGGTTCGAA-AACCAAAAAA-A-AAAAAA------------------------A----TTAG----AAAGT-----------------------------TT--CAATTTATAAAA--CAATGATTTTAATTATGTTCTTTTTATTTACTT------AGAATGTC---GGAGCCA-CC--ACT--AAAAAT---------TAGGCGGATTGACTTTTGCCAA---GT----------------------------------------------------------------------------------------------------------------------------T------G-----AGTAAG-----T-------------ATAAAT---TSizeHit CountTotal NormTotal
No Reads
droKik1
TTTTTCGTAGGGTTT-TT--------------------TATTAAT-TTTATTC--------TTTTT------------------------TTCGGAGGTGTTTAGTCCGTAGGCGTATTTTTCAACATGAATCGGGCATACC-TTCAGCGACGGCGTTTAA---G-GTATCTTTAAAAGATTCACCT----TCCATGGTTCGAT-AACCAAAAAA---AA-CGTATTTTATTCAAA-TAAAAAAT-AA--------AAA--TAAGTCACAAAATCAA--------------TTATAT--A--TATTTTCAGATTTGTTTTT-----------------------TAATAGACTGGATGTC---GGAGCCA-----CAGAATAAAATTCAAAAGA---------GGGTGTACCATGTCGAACGTAAGTAAA----ATAAAATCTAATAAAATATATTAGTTTAATTTTCACAT--ATATTACTT------TTTTTAGGAGATGACTTTTTGGACGAATCCTTTGAAGCCCCGGC-------------A------G-----AGC---------CC----------CCTCAGA---ASizeHit CountTotal NormTotal
No Reads
droAna3
TTATTCATAGGTTTTATTT--A----------GCATTCGGTTTTTTTTTATATAAATTTTTTTTTT---TG----------------AA-TACGGAGGTGTTTAGTCCGTAGGCGTATTTTCTAATACGAATCGGGCATGCC-CTTAGCGACGGCGCTTTG---G-GTATCT-AGGAAGATTCACCT----ACCATGGTTCGAA-GGT------------------ATCAATGTAT-CAATACAG-AT--------TA-A------TTTAAT-----TACAAAACATTAAAAAAA--------------AC--CTTTTTTT-----------------------TAGA-------ATGTC---GGACCAA-CC--CCCAAAA--------AAATTGAGGAAAGTTGTTTTCAACATGGACGGTAAACAAA---------TATAAAATAAT---------AATAATTAAGAAT--ATTTATGTTTATT---T------------------------------------------------------------------------------------------------------ASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................TTCACCT----ACCATGGTTCGAA-GGT------------------ATCAA...........................................................................................................................................................................................................................................................................................................................................................................2811.001100000
........................................................................................................................................................................................................................................................................................................................................................TAGA-------ATGTC---GGACCAA-CC--CCCAAAA--------............................................................................................................................................................................................................2550.804400000
...............................................................................................................................................................................GAAGATTCACCT----ACCATGGTTCGAA-GG...................................................................................................................................................................................................................................................................................................................................................................................................2770.715410000
................................................................................................................................................................................................................................................................................................................................T-----------------------TAGA-------ATGTC---GGACCAA-CC--CCCAAA.....................................................................................................................................................................................................................2550.603201000
................................................................................................................................................................................................................................................................................................................................T-----------------------TAGA-------ATGTC---GGACCAA-CC--CCC........................................................................................................................................................................................................................2250.603120000
..........................................................................................................................TAATACGAATCGGGCATGCC-CTTAGCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.501100000
.................................................................................................................................AATCGGGCATGCC-CTTAGCGACGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.501010000
TTATTCATAGGTTTTATTT--A----------GCATTCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.501100000
....................................................................................................................................CGGGCATGCC-CTTAGCGACGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501100000
..........................................................................................................................TAATACGAATCGGGCATGCC-CTTAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.501100000
...................................................................................................................................TCGGGCATGCC-CTTAGCGACGGCGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.501100000
................................................................................................................................GAATCGGGCATGCC-CTTAGCGACGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.501100000
......................................................................................................TAGTCCGTAGGCGTATTTTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501010000
....TCATAGGTTTTATTT--A----------GCATTCGGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.501100000
..................................................................................................................................ATCGGGCATGCC-CTTAGCGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501010000
.........................................................................................................................................................................TCT-AGGAAGATTCACCT----ACCATGGTTC.........................................................................................................................................................................................................................................................................................................................................................................................................2780.504040000
...........TTTTATTT--A----------GCATTCGGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.501010000
........................................................................................................................................................................................................................................................................................................................................................TAGA-------ATGTC---GGACCAA-CC--CCCA.......................................................................................................................................................................................................................2250.402200000
..............................................................................................GAGGTGTTTAGTCCGTAGGCGTATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.402000020
................................................................................................................................................................................................................................................................................................................................T-----------------------TAGA-------ATGTC---GGACCAA-CC--CCCAAAA--------A...........................................................................................................................................................................................................2750.402200000
........................................................................................................................................................................................................................................................................................................................................................TAGA-------ATGTC---GGACCAA-CC--CCCAAA.....................................................................................................................................................................................................................2450.402200000
..................................................................................................................GTATTTTCTAATACGAATCGGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.402011000
.........................................................................................................................................................................................................................................................................................................................................................AGA-------ATGTC---GGACCAA-CC--CCCAA......................................................................................................................................................................................................................2250.402200000
.................................................................................................................................................TAGCGACGGCGCTTTG---G-GTATCT-AGGAA................................................................................................................................................................................................................................................................................................................................................................................................................................2840.251100000
...............................................................................................................................................................................GAAGATTCACCT----ACCATGGTTCGAA-G....................................................................................................................................................................................................................................................................................................................................................................................................2680.252200000
......................................................................................................................TTTCTAATACGAATCGGGCATGCC-C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.251010000
......................................................................................................................TTTCTAATACGAATCGGGCATGCC-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.251010000
.................................................................................................................................................TAGCGACGGCGCTTTG---G-GTATCT-AG...................................................................................................................................................................................................................................................................................................................................................................................................................................2540.251100000
...................................................................................................................TATTTTCTAATACGAATCGGGCATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.251001000
...............................................................................................................................................................................GAAGATTCACCT----ACCATGGTTC.........................................................................................................................................................................................................................................................................................................................................................................................................2280.252110000
.......................................................................................................................TTCTAATACGAATCGGGCATGCC-C..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.251000010
.......................................................................................................................TTCTAATACGAATCGGGCATGCC-CT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.251100000
.........................................................................................................................CTAATACGAATCGGGCATGCC-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.251010000
................................................................................................................................................................................................................................................................................................................................T-----------------------TAGA-------ATGTC---GGACCAA-CC--CC.........................................................................................................................................................................................................................2150.201010000
.......................................................................................................................................................CGGCGCTTTG---G-GTATCT-A....................................................................................................................................................................................................................................................................................................................................................................................................................................1850.201100000
........................................................................................................................................................................................................................................................................................................................................................TAGA-------ATGTC---GGACCAA-CC--CCC........................................................................................................................................................................................................................2150.201100000
.....................................................................TG----------------AA-TACGGAGGTGTTTAGTCCGTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.201100000
.........................................................................................................................................................................................................................................................................................................................................................AGA-------ATGTC---GGACCAA-CC--CCC........................................................................................................................................................................................................................2050.201100000
................................................................................................................................................................................................................................................................................................................................T-----------------------TAGA-------ATGTC---GGACCAA-CC--CCCAA......................................................................................................................................................................................................................2450.201100000
........................................................................................................................................................................................................................................................................................................................................................TAGA-------ATGTC---GGACCAA-CC--CCCAA......................................................................................................................................................................................................................2350.201001000
........................................................................................................................................CATGCC-CTTAGCGACGGCGCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.201100000
................................................................................................................................................................................................................................................................................................................................T-----------------------TAGA-------ATGTC---GGACCAA-CC--CCCAAAA--------AAA.........................................................................................................................................................................................................2950.201100000
................................................................................................................................................................................................................................................................................................................................T-----------------------TAGA-------ATGTC---GGACCAA-CC--C..........................................................................................................................................................................................................................2050.201010000
................................................................................................................................................................................................................................................................................................................................T-----------------------TAGA-------ATGTC---GGACCAA-CC--CCCA.......................................................................................................................................................................................................................2350.201100000
...........................................................................................................................................................GCTTTG---G-GTATCT-AGGAAGATTCACC........................................................................................................................................................................................................................................................................................................................................................................................................................2670.141010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TCAACATGGACGGTAAACAAA---------TAT........................................................................................................................................................2470.141010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TCAACATGGACGGTAAACAAA---------TATAAA.....................................................................................................................................................2770.141010000
............................................................................................................................................................CTTTG---G-GTATCT-AGGAAGATT............................................................................................................................................................................................................................................................................................................................................................................................................................2170.141010000
..............................................................................................................................................................................................................................................................................................................................................................................................................GAAAGTTGTTTTCAACATGGACGGT...........................................................................................................................................................................2570.141010000
..........................................................................................................................................................................CT-AGGAAGATTCACCT----ACCATGG............................................................................................................................................................................................................................................................................................................................................................................................................2380.131010000
...............................................................................................................................................................................GAAGATTCACCT----ACCATGGTTCGAA-GC...................................................................................................................................................................................................................................................................................................................................................................................................2780.131010000
.........................................................................................................................................................................TCT-AGGAAGATTCACCT----ACCATGG............................................................................................................................................................................................................................................................................................................................................................................................................2480.131000010
...............................................................................................................................................................................GAAGATTCACCT----ACCATGGTTCGA.......................................................................................................................................................................................................................................................................................................................................................................................................2480.131100000
...............................................................................................................................................................................GAAGATTCACCT----ACCATGG............................................................................................................................................................................................................................................................................................................................................................................................................1980.131010000
..............................................................................................................................................................................GGAAGATTCACCT----ACCATGGTTC.........................................................................................................................................................................................................................................................................................................................................................................................................2380.131010000
.......................................................................................................................................................................TATCT-AGGAAGATTCACCT----ACCATGG............................................................................................................................................................................................................................................................................................................................................................................................................2680.131100000
..............................................................................................................................................................................GGAAGATTCACCT----ACCATGGTTCGAA-G....................................................................................................................................................................................................................................................................................................................................................................................................2780.131100000
..............................................................................................................................................................................GGAAGATTCACCT----ACCATGGTTCGAA-.....................................................................................................................................................................................................................................................................................................................................................................................................2680.131100000
..............................................................................................GAGGTGTTTAGTCCGTAGGCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.111100000
..............................................................................................GAGGTGTTTAGTCCGTAGGCGTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2390.111010000
droBip1
TTTTTCTTAGGGTTT-----TT----------CCCTT-TGTTAGT-TTTATTTTG-----ATTTTT------------------------TTCGGAGGTGTTTAGTCCGTAGGCATATTTTTAAATATTAATCGGGCATGTC-TCAAGCGACGGCGCTTAA---G-GCATCTTTAGAAGATTCACTT----TCCATTGTCCGTT-GAAAA-AAAA-A-AG-CGTATTTCATTAAAA-TAAAACAA-AT--------AA-A------CTTATAAAATGTACAAAAAA-----TTATGT--A--TTCTTT------TATTTTC-----------------------TAGA---TC-AAAGAT---GGAGCCT-----CAAAAAAAAATTTTAAAGA---------TGGCGTTTAATGTCGATGGTAAGTAAATTAAATAAAATC------------------TAATTTTTTTAT--TAATTTCTT------TTCTCAGATGAAGACCTAATTGCGGAGACGC-------------AAATGAGCGAGGTG------G-----AGATAG-----T-------------CGAGGT---GSizeHit CountTotal NormTotal
No Reads
dp5
TTCATCATTGTATTTAAAATGTATAATATATTCATTA-CCTAAAA-TTAGTACAG------ATTTT------------------------ACTGGGGGTGTTTAGTCCGTAGGCGTGTTTTTCAACATGAATCGGGCATGCCCTTTAGCGACGGCGTTAAA---GAGTATCTTAAGAAGATTCACCTATATACCATGGTCCGCAAAACCAAAAAA-A-AAAAAA------------------------A---------------------AAATATA--------------TA-TATATATATCTGTGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTATAC--AAAAACA----------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................TCGGGCATGCCCTTTAGCGACGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2418.0080000000260
..................................................................................................................GTGTTTTTCAACATGAATCGGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2344.501801800000000
...................................................................................................................................TCGGGCATGCCCTTTAGCGACGGCGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000030
............................TATTCATTA-CCTAAAA-TTAGTACAG------A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000300
..................................................................................................................GTGTTTTTCAACATGAATCGGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2251.8090900000000
.............................................................................................................TAGGCGTGTTTTTCAACATGAATCGGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2841.7570700000000
...................................................................................................................TGTTTTTCAACATGAATCGGGCAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000010
............................................................................................................................................................................TAAGAAGATTCACCTATATACCATGG............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000010
.............................................................................................................TAGGCGTGTTTTTCAACATGAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.8040100000300
.................................................................................................................CGTGTTTTTCAACATGAATCGGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.7530300000000
..................................................................................................................GTGTTTTTCAACATGAATCGGGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.7530300000000
......................................................................................................TAGTCCGTAGGCGTGTTTTTCAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.6030300000000
..................................................................................................TGTTTAGTCCGTAGGCGTGTTTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.5740000000400
...................................................................................................................TGTTTTTCAACATGAATCGGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.5020200000000
................................................................TT------------------------ACTGGGGGTGTTTAGTCCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.5030200001000
...........................................................................................CTGGGGGTGTTTAGTCCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1860.5030300000000
.....................................................................................................................TTTTTCAACATGAATCGGGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.5020200000000
..............................................................................................GGGGTGTTTAGTCCGTAGGCGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.4330300000000
.............................................................................................................TAGGCGTGTTTTTCAACATGAATCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2650.4020100000010
.....................................................................................................TTAGTCCGTAGGCGTGTTTTTCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.4020000000200
......................................................................................................TAGTCCGTAGGCGTGTTTTTCAACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.4020200000000
.....................................................................................................TTAGTCCGTAGGCGTGTTTTTCAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.4020200000000
......................................................................................................TAGTCCGTAGGCGTGTTTTTCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.4020200000000
.....................................................................................................TTAGTCCGTAGGCGTGTTTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.2920100000100
...................................................................................................................TGTTTTTCAACATGAATCGGGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.2510100000000
....................................................................................................................GTTTTTCAACATGAATCGGGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.2510100000000
...........................................................................................................CGTAGGCGTGTTTTTCAACATGAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.2010100000000
.............................................................................................................TAGGCGTGTTTTTCAACAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1950.2010100000000
.....................................................................................................TTAGTCCGTAGGCGTGTTTTTCAACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2650.2010000100000
......................................................................................................TAGTCCGTAGGCGTGTTTTTCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.2010100000000
.....................................................................................................TTAGTCCGTAGGCGTGTTTTTCAACAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2750.2010100000000
.......................................................................................................AGTCCGTAGGCGTGTTTTTCAACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.2010100000000
.............................................................................................................TAGGCGTGTTTTTCAACATGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.2010000100000
..................................................................................................................GTGTTTTTCAACATGAATCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.2010100000000
......................................................................................................TAGTCCGTAGGCGTGTTTTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.2010100000000
.....................................................................................................TTAGTCCGTAGGCGTGTTTTTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.2010100000000
.............................................................................................................TAGGCGTGTTTTTCAACATGAATCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.2010100000000
.............................................................................................................TAGGCGTGTTTTTCAACATGAATA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.2010100000000
.................................................................T------------------------ACTGGGGGTGTTTAGTCCGTAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.1710010000000
.................................................................T------------------------ACTGGGGGTGTTTAGTCCGTAGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.1710100000000
................................................................TT------------------------ACTGGGGGTGTTTAGTCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2060.1710000100000
.................................................................T------------------------ACTGGGGGTGTTTAGTCCGTAGGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.1710100000000
.................................................................T------------------------ACTGGGGGTGTTTAGTCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2060.1710100000000
................................................................TT------------------------ACTGGGGGTGTTTAGTCCGTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2360.1710100000000
................................................................TT------------------------ACTGGGGGTGTTTAGTCCGTAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.1710100000000
................................................................................................GGTGTTTAGTCCGTAGGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.1410100000000
.................................................................................................GTGTTTAGTCCGTAGGCGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.1410100000000
..............................................................................................GGGGTGTTTAGTCCGTAGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.1410100000000
................................................................................................GGTGTTTAGTCCGTAGGCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.1410000100000
..............................................................................................GGGGTGTTTAGTCCGTAGGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.1410000100000
.............................................................................................................................CATGAATCGGGCATGCCCTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................20100.1010100000000
............................................................................................................................................................................................................AAACCAAAAAA-A-AAAAAA------------------------A---------------------A...................................................................................................................................................................................................................................................................................................................................20200.0510100000000
.............................................................................................................................................................................................................AACCAAAAAA-A-AAAAAA------------------------A---------------------AA..................................................................................................................................................................................................................................................................................................................................20200.0510100000000
droPer2
TTTTCCATAGGTTTA-TTTGCT----------ACCTT-TACTTAT-TTTCATTTGT----AGTATTTTTTGCTTATTTTTAAATTCATAAAATGGAGGTGTTTAGTCCGTAGGCGTAATT-GAATTACGAATCGGGCATATC-TTTAGCGCCTGCGCTAAA---G-ATATCTTTGGAAGATTCACCG----GCCAGAGTCCGACAGACCAAAAAA-A-A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................................GAGGTGTTTAGTCCGTAGGCGTA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2372.43170200015
..............................................................................................GAGGTGTTTAGTCCGTAGGCGTAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2471.57110000011
..............................................................................................GAGGTGTTTAGTCCGTAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1981.008011006
..............................................................................................GAGGTGTTTAGTCCGTAGGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.866040002
..............................................................................................GAGGTGTTTAGTCCGTAGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.574021001
..............................................................................................GAGGTGTTTAGTCCGTAGGCGTAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.433000003
..................................CTT-TACTTAT-TTTCATTTGT----AG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22100.404040000
..............................................................................................................................................................................GGAAGATTCACCG----GCCAGAGTCC.........................................................................................................................................................................................................................................................................................................................................................................................................2380.383030000
..............................................................................................................................................................................GGAAGATTCACCG----GCCAGAGTCCGAC......................................................................................................................................................................................................................................................................................................................................................................................................2680.383030000
..............................................................................................GAGGTGTTTAGTCCGTAGGCGTAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.292000002
..............................................................................................GAGGTGTTTAGTCCGTAGGCGTAATT-G........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2770.292010001
..............................................................................................................................................................................GGAAGATTCACCG----GCCAGAGTCCGA.......................................................................................................................................................................................................................................................................................................................................................................................................2580.252010001
..............................................................................................................................................................................GGAAGATTCACCG----GCCAGAGTC..........................................................................................................................................................................................................................................................................................................................................................................................................2280.252020000
..............................................................................................................................................................................GGAAGATTCACCG----GCCAGAGT...........................................................................................................................................................................................................................................................................................................................................................................................................2180.252020000
.............................................................................................................................TACGAATCGGGCATATC-TTTAGCGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.222110000
...............................................................................................................................................................AA---G-ATATCTTTGGAAGATTC...........................................................................................................................................................................................................................................................................................................................................................................................................................20100.202200000
.........................................................................................................................................ATATC-TTTAGCGCCTGCGCTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.201010000
....................................................................................TCATAAAATGGAGGTGTTTAGTCCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.171010000
.............................................................................................................................TACGAATCGGGCATATC-TTTAGCGCCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2760.171010000
...................................................................................................................................TCGGGCATATC-TTTAGCGCCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.171100000
....................................................................................................................................CGGGCATATC-TTTAGCGCCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.171010000
..............................................................................................GAGGTGTTTAGTCCGTAGGCGTAATT-.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.141000001
.....CATAGGTTTA-TTTGCT----------ACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.141001000
...............................................................................................AGGTGTTTAGTCCGTAGGCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.141010000
..............................................................................................GAGGTGTTTAGTCCGTAGGCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2270.141000001
..............................................................................................GAGGTGTTTAGTCCGTAGGCGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2270.141000001
..............................................................................................GAGGTGTTTAGTCCGTAGGCGTAATC-.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.141000001
..............................................................................................GAGGTGTTTAGTCCGTAGGCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.141000001
...............................................................................................AGGTGTTTAGTCCGTAGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.141010000
...........................................................................................................................ATTACGAATCGGGCATATC-TT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.131010000
............................................................................................................................TTACGAATCGGGCATATC-TTTAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.131100000
...............................................................................................................................................................................GAAGATTCACCG----GCCAGAG............................................................................................................................................................................................................................................................................................................................................................................................................1980.131010000
....................................................................................................................................................................................TTCACCG----GCCAGAGTCCGAC......................................................................................................................................................................................................................................................................................................................................................................................................2080.131010000
..............................................................................................................................................................................GGAAGATTCACCG----GCCAGAGTCCG........................................................................................................................................................................................................................................................................................................................................................................................................2480.131010000
.................................................................................................................................................................................AGATTCACCG----GCCAGAGTCC.........................................................................................................................................................................................................................................................................................................................................................................................................2080.131010000
.................................................................................................GTGTTTAGTCCGTAGGCGTAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.131001000
............................................................................................TGGAGGTGTTTAGTCCGTAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.131010000
............TTA-TTTGCT----------ACCTT-TACTTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.131010000
...................................................................................................................................................................................ATTCACCG----GCCAGAGTCCGAC......................................................................................................................................................................................................................................................................................................................................................................................................2180.131010000
..................................................................................................TGTTTAGTCCGTAGGCGTAATT-GAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2580.131010000
......................................................................................................TAGTCCGTAGGCGTAATT-G........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1980.131010000
.......................................................................................................................T-GAATTACGAATCGGGCATATC-TT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.131010000
.........................................................................................................................................................................TCTTTGGAAGATTCACCG----GC.................................................................................................................................................................................................................................................................................................................................................................................................................2090.111010000
.............................................................................................................................TACGAATCGGGCATATC-TTTAGCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2590.111010000
TTTTCCATAGGTTTA-TTTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2090.111010000
....................................................................................................................AATT-GAATTACGAATCGGGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.111010000
....................................................................................................................AATT-GAATTACGAATCGGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2090.111010000
......................................................................................................................TT-GAATTACGAATCGGGCATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.111010000
...................................................................................................................TAATT-GAATTACGAATCGGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.111010000
..........................................................................................................................................................................CTTTGGAAGATTCACCG----GCCA...............................................................................................................................................................................................................................................................................................................................................................................................................2190.111010000
.................................................................................................................................AATCGGGCATATC-TTTAGCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.111100000
...................................................................................................................................TCGGGCATATC-TTTAGCGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2090.111100000
.................................................................................................................................AATCGGGCATATC-TTTAGCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2090.111010000
......................................................................................................................................................................ATATCTTTGGAAGATTCACCG----GCC................................................................................................................................................................................................................................................................................................................................................................................................................2490.111010000
...................................................................................................................................TCGGGCATATC-TTTAGCGCCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.111100000
.......................................................................................TAAAATGGAGGTGTTTAGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.111001000
........................................................................................AAAATGGAGGTGTTTAGTCCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.111010000
.......................................................................................................................................................................TATCTTTGGAAGATTCACCG----...................................................................................................................................................................................................................................................................................................................................................................................................................20100.101010000
...............................................TTCATTTGT----AGTATTTTTTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.101010000
...........................................AT-TTTCATTTGT----AGTATTTTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.101010000
..................................CTT-TACTTAT-TTTCATTTGT----AGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23100.101010000
droWil2
TATTTAGTAGGTTCCA---------------------------------------------TTTTC------------------------AATGGAGGTGTTTAGTCCGTAGGCATATTT-CCATTATGAATCGGGCATACC-TAATGCGACGGCGCATTA---G-GCATCTTTTGAAGATTCACCT----ACCATGGTTCGAA-TACCTAAAACAA-A-ACAA------------------------AATTCCTTG----TGTGT-----------------------------TT--CATT-----------------------------------ATTCA---------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------TGTGGAA-ATAGAAAT---------TA----------ATACATTTTTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................CATATTT-CCATTATGAATCGGGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2481.8815015000
....................................................................................................................ATTT-CCATTATGAATCGGGCATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2371.29944010
..................................................................................................................................................TGCGACGGCGCATTA---G-GCATCTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................2480.88707000
.................................................................................................................CATATTT-CCATTATGAATCGGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2380.63503020
.........................................................................................................................CCATTATGAATCGGGCATACC-TAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.57404000
....................................................................................................................ATTT-CCATTATGAATCGGGCAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2270.57404000
.........................................................................................................................CCATTATGAATCGGGCATACC-T..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2270.57404000
.................................................................................................................................................................................................CATGGTTCGAA-TACCTAAAACAA-A-ACA...................................................................................................................................................................................................................................................................................................................................................................................2720.50101000
...........................................................................................................................................................................................................A-TACCTAAAACAA-A-ACAA------------------------AATTCCT...................................................................................................................................................................................................................................................................................................................................................2520.50101000
.................................................................................................................CATATTT-CCATTATGAATCGGGCATACC-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2870.43303000
...............................................................................................................................................TAATGCGACGGCGCATTA---G-G...........................................................................................................................................................................................................................................................................................................................................................................................................................................2080.38303000
............TCCA---------------------------------------------TTTTC------------------------AATGGAGGTGTTTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.33201010
..................................................................................................................................................................................................................................................................................................................................................ATTCA---------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------TGTGGAA-ATAGAAAT---------TA----------ATACA......2860.33200020
.................................................................................................................CATATTT-CCATTATGAATCGGGCAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.29202000
.........................................................................................................TCCGTAGGCATATTT-CCATTATGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.29202000
....................................................................................................................ATTT-CCATTATGAATCGGGCATACC-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.29202000
.......................................................................................................................T-CCATTATGAATCGGGCATACC-TAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.29202000
.......................................................................................................................................................................CATCTTTTGAAGATTCACCT----AC.................................................................................................................................................................................................................................................................................................................................................................................................................2270.29202000
......................................................................................................................................................................GCATCTTTTGAAGATTCACCT----ACCA...............................................................................................................................................................................................................................................................................................................................................................................................................2570.29202000
.........................................................................................................................CCATTATGAATCGGGCATACC-TA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.29202000
.......................................................................................................................................................................CATCTTTTGAAGATTCACCT----ACCA...............................................................................................................................................................................................................................................................................................................................................................................................................2470.29202000
.......................................................................................................................................................................................................................................................................TGT-----------------------------TT--CATT-----------------------------------ATTCA---------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------TGTGGAA-........................................2280.25202000
..............................................................................................................................................................................TGAAGATTCACCT----ACCATGGTTCG........................................................................................................................................................................................................................................................................................................................................................................................................2480.25202000
................................................................................................................................................................................................................................................................G----TGTGT-----------------------------TT--CATT-----------------------------------ATTCA---------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------TGTGGAA-A.......................................2680.25202000
................................................................................................................................................................................................................................................................G----TGTGT-----------------------------TT--CATT-----------------------------------ATTCA---------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------TGTGG...........................................2380.25202000
..TTTAGTAGGTTCCA---------------------------------------------TTTTC------------------------AATGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2640.25100010
...........................................................................................................................................................................................................................................................TCCTTG----TGTGT-----------------------------TT--CATT-----------------------------------ATTCA---------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------TGT.............................................2680.25201010
................................................................................................................................................................................................................................................................G----TGTGT-----------------------------TT--CATT-----------------------------------ATTCA---------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------TGTGGA..........................................2480.25202000
.......................................................................................................................................................................................................................................................................TGT-----------------------------TT--CATT-----------------------------------ATTCA---------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------TGTGGA..........................................2180.25202000
....TAGTAGGTTCCA---------------------------------------------TTTTC------------------------AATGGAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.25100010
....................................................................................................................ATTT-CCATTATGAATCGGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.25202000
..................................................................................................................ATATTT-CCATTATGAATCGGGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2380.25202000
..............................................................................................GAGGTGTTTAGTCCGTAGGCATA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2390.22202000
...............................................................................................................................................................................GAAGATTCACCT----ACCATGGTTCGAA-.....................................................................................................................................................................................................................................................................................................................................................................................................2560.17101000
..............................................................................................GAGGTGTTTAGTCCGTAGGCATAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.17101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAA-ATAGAAAT---------TA----------ATACATT....2460.17101000
.....................................................................................................................................................................................................................................................................................................................................................CA---------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------TGTGGAA-ATAGAAAT---------TA----------ATACATT....2760.17100010
...............A---------------------------------------------TTTTC------------------------AATGGAGGTGTTTAGTCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.17101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAA-ATAGAAAT---------TA----------ATACATTTT..2460.17101000
...........................................................................................................................................................GCATTA---G-GCATCTTTTGAAGATTCACC........................................................................................................................................................................................................................................................................................................................................................................................................................2760.17101000
..............................................................................................GAGGTGTTTAGTCCGTAGGCATATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.17101000
.....................................................................................................................................................................................................................................................................................................................................................CA---------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------TGTGGAA-ATAGAAAT---------TA----------ATACA......2560.17101000
....................................................................................................................................................................................................................................................................................................................................................TCA---------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------TGTGGAA-ATAGAAAT---------TA----------ATAC.......2560.17101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAA-ATAGAAAT---------TA----------ATACATTTTT.2460.17101000
....................................................................................................................................................................................................................................................................................................................................................TCA---------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------TGTGGAA-ATAGAAAT---------TA----------ATACA......2660.17100010
.....................................................................................................................................................................................................................................................................................................................................................CA---------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------TGTGGAA-ATAGAAAT---------TA----------ATACATTT...2860.17100010
..........................................................................................................................CATTATGAATCGGGCATACC-TAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.14101000
.........................................................................................................................CCATTATGAATCGGGCATACC-TAATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.14101000
.......................................................................................................................................................CGGCGCATTA---G-GCATCTTTTGAAGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................2670.14101000
.......................................................................................................................................................................CATCTTTTGAAGATTCACCT----ACCAT..............................................................................................................................................................................................................................................................................................................................................................................................................2570.14100010
.................................................................................................................CATATTT-CCATTATGAATCGGGCATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.14101000
.....................................................................................................................TTT-CCATTATGAATCGGGCATACC-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.14101000
.....................................................................................................................................GGGCATACC-TAATGCGACGGCGCAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.14101000
.....................................................................................................................TTT-CCATTATGAATCGGGCATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2270.14101000
...........................................................................................................CGTAGGCATATTT-CCATTATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.14101000
............................................................................................................................TTATGAATCGGGCATACC-TAATGCGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.14101000
............................................................................................................GTAGGCATATTT-CCATTATGAATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.14101000
.........................................................................................................................................ATACC-TAATGCGACGGCGCATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2270.14101000
.....................................................................................................TTAGTCCGTAGGCATATTT-CCATTATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2770.14100010
.......................................................................................................................................................................CATCTTTTGAAGATTCACCT----ACCATGG............................................................................................................................................................................................................................................................................................................................................................................................................2770.14101000
............................................................................................................GTAGGCATATTT-CCATTATGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2270.14101000
.............................................................................................................................................................ATTA---G-GCATCTTTTGAAGATT............................................................................................................................................................................................................................................................................................................................................................................................................................2170.14100010
............................................................................................................................TTATGAATCGGGCATACC-TAATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.14101000
...................................................................................................................TATTT-CCATTATGAATCGGGCATAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.14101000
....................................................................................................................ATTT-CCATTATGAATCGGGCATACC-T..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.14101000
.........................................................................................................TCCGTAGGCATATTT-CCATTATGAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.14101000
..........................................................................................................................CATTATGAATCGGGCATACC-TA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2270.14101000
......................................................................................................................................GGCATACC-TAATGCGACGGCGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.14101000
.......................................................................................................................................................................CATCTTTTGAAGATTCACCT----...................................................................................................................................................................................................................................................................................................................................................................................................................2070.14101000
....................................................................................................................ATTT-CCATTATGAATCGGGCATACC-TT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2770.14101000
..............................................................................................................................................................TTA---G-GCATCTTTTGAAGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................1970.14101000
.....................................................................................................TTAGTCCGTAGGCATATTT-CCATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.14101000
....................................................................................................................ATTT-CCATTATGAATCGGGCATACA-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.14101000
......................................................................................................................TT-CCATTATGAATCGGGCATA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.14110000
.......................................................................................................................................................................CATCTTTTGAAGATTCACCT----ACC................................................................................................................................................................................................................................................................................................................................................................................................................2370.14101000
........................................................................................................................................................GGCGCATTA---G-GCATCTTTTGAAGATT............................................................................................................................................................................................................................................................................................................................................................................................................................2670.14101000
......................................................................................................................................GGCATACC-TAATGCGACGGCGCAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.14101000
...................................................................................................................TATTT-CCATTATGAATCGGGCATACC-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.14101000
.........................................................................................................................CCATTATGAATCGGGCATAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2070.14101000
....................................................................................................................ATTT-CCATTATGAATCGGGCATACC-TAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2870.14100010
.......................................................................................................................................................CGGCGCATTA---G-GCATCTTTTGAAGATT............................................................................................................................................................................................................................................................................................................................................................................................................................2770.14101000
.......................................................................................................................T-CCATTATGAATCGGGCATACC-TAATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2770.14101000
.............................................................................................................................................................ATTA---G-GCATCTTTTGAAGATTCAC.........................................................................................................................................................................................................................................................................................................................................................................................................................2470.14101000
..............................................................................................................................ATGAATCGGGCATACC-TAATGCGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.14101000
....................................................................................................................ATTT-CCATTATGAATCGGGCATAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.14110000
.........................................................................................................TCCGTAGGCATATTT-CCATTATGAATCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2870.14101000
.....................................................................................................................................................................................................................................................................TGTGT-----------------------------TT--CATT-----------------------------------ATTCA---------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------TGTGG...........................................2280.13101000
.......................................................................................................................................................................................................................................................................TGT-----------------------------TT--CATT-----------------------------------ATTCA---------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------TGTGGAA-ATA.....................................2580.13101000
........................................................................................................................................................................................................................................................................................................T--CATT-----------------------------------ATTCA---------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------TGTGGAA-ATAGAAAT---------.......................2680.13100010
..................................................................................................................................................................................................................................................................................................................................................ATTCA---------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------TGTGGAA-ATAGAAAT---------TA----------A..........2480.13101000
.......................................................................................................................................................................................................................................................................TGT-----------------------------TT--CATT-----------------------------------ATTCA---------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------TGTGGAA-A.......................................2380.13110000
..................................................................................................................................................................................................................................................................................................................................................ATTCA---------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------TGTGGAA-ATAGAAAT---------TA----------AT.........2580.13100010
..................................................................................................................................................TGCGACGGCGCATTA---G-GCATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................2180.13100010
...............................................................................................................................................................................GAAGATTCACCT----ACCATGGTTCGA.......................................................................................................................................................................................................................................................................................................................................................................................................2480.13101000
..............................................................................................................................................................................TGAAGATTCACCT----ACCATGGTTC.........................................................................................................................................................................................................................................................................................................................................................................................................2380.13100010
...............................................................................................................................................................................................................................................................TG----TGTGT-----------------------------TT--CATT-----------------------------------ATTCA---------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------TGTGGAA-A.......................................2780.13101000
..................................................................................................................................................................................................................................................................................................................................................ATTCA---------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------TGTGGAA-ATAGA...................................1880.13101000
.......................................................................................................................................................................................................................................................................TGT-----------------------------TT--CATT-----------------------------------ATTCA---------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------TGTGGAA-ATAGA...................................2780.13100010
........................................................................................................................................................................................................................................................................GT-----------------------------TT--CATT-----------------------------------ATTCA---------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------TGTGGAA-........................................2180.13101000
....................................................................................................................ATTT-CCATTATGAATCGGGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.13100010
..........................................................................................................................................................................................................................................................TTCCTTG----TGTGT-----------------------------TT--CATT-----------------------------------ATTCA---------------------------------------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------TGT.............................................2780.13100010
..............................................................................................................................................................................TGAAGATTCACCT----ACCATGGTTCGA.......................................................................................................................................................................................................................................................................................................................................................................................................2580.13101000
.................................................................................................................CATATTT-CCATTATGAATCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.13101000
.......................................................................................................................................................CGGCGCATTA---G-GCATCTTTTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................2280.13100100
..........................................................................................................................................................................CTTTTGAAGATTCACCT----ACCATGG............................................................................................................................................................................................................................................................................................................................................................................................................2490.11101000
..............................................................................................................................................................................TGAAGATTCACCT----ACCATGGTT..........................................................................................................................................................................................................................................................................................................................................................................................................2290.11101000
...........................................................................................................................................................................TTTTGAAGATTCACCT----ACCATG.............................................................................................................................................................................................................................................................................................................................................................................................................22100.10101000
..........................................................................................AATGGAGGTGTTTAGTCCGTAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22180.06101000
............................................................................................TGGAGGTGTTTAGTCCGTAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21190.05100010
..............................................................................................GAGGTGTTTAGTCCGTAGGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010

Generated: 05/19/2015 at 05:27 AM