ID:

dsi_6898

 Coordinate:

3l:21774629-21774778 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-53.1 -53.0 -52.8

Flybase annnotation

five_prime_UTR [3l_21774404_21774593_+]; CDS [3l_21774594_21774628_+]; exon [3l_21774404_21774628_+]; intron [3l_21774629_21776184_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GGCAGAGGCATCAGGATGAGCGCACCTGGCATGGACAAGAGAAAACTCTCGTAAGTATTTTGCAGTGCTCCTTCATTTTTCCTCCACGGCGCACACACACACGCCGTCGGCAGAGTACACACACTCAGCCCGTGCGCGAGTGTGAGTGGCAGCTGCGCGCAGGCAGCGCGGTCGGCGCGAAATTGATTTTTCGCGGCAGAAGTTTTCTTGAGCCAGCAGGCACTTTCCTTTCCACGTCGGGATAAACAAG
**************************************************........(((((.((((((.............((((((((..........)))))).))..)))))).(((((((.((......))))))))).......(((((((.......)))))))...(((((((......))))))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR618934
dsim w501 ovaries
 M025
embryo
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 SRR553488
RT_0-2 hours eggs
..................................................................................................................................................................................................................................CCTTTCCACGTCGGGATA...... 18 0 1 4.00 4 4 0 0 0 0 0
..............................ATGGACAAGAGAAAACTCT......................................................................................................................................................................................................... 19 0 1 2.00 2 0 0 2 0 0 0
.............GGATGAGCGCACCTGGCA........................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0
......................................................GTACTTTGCAGTGCTC.................................................................................................................................................................................... 16 1 2 1.00 2 0 2 0 0 0 0
..............................ATGGACAAGAGAAAACTCTC........................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 1 0
.......................................................................................................................................................................GCGGTCGGCGCGAAATTGATTTTTCG......................................................... 26 0 1 1.00 1 0 1 0 0 0 0
...............................TGGACAAGAGAAAACTC.......................................................................................................................................................................................................... 17 0 1 1.00 1 0 0 0 1 0 0
......................................GAGAGAACTCTCGTGA.................................................................................................................................................................................................... 16 2 20 0.60 12 0 0 0 0 0 12
.................................................................................................CACACGCTGTCGGCAGAAT...................................................................................................................................... 19 2 2 0.50 1 0 1 0 0 0 0
......................................................GTACTTTGCAGTGCTCA................................................................................................................................................................................... 17 2 20 0.30 6 0 6 0 0 0 0
......................................................GTACTTTGCAGTGCT..................................................................................................................................................................................... 15 1 12 0.08 1 0 1 0 0 0 0
.........................................................................................................................................................................................................GTTTTGTTGAGCCAG.................................. 15 1 13 0.08 1 0 0 0 1 0 0
.......................................................................................................................................................................................TCATTTTTCGAGGCTGAAGT............................................... 20 3 14 0.07 1 0 0 0 0 1 0
.......................AACTGGCACGGACAAGGGAA............................................................................................................................................................................................................... 20 3 17 0.06 1 0 0 0 0 0 1
.........................CTGGCACGGACAAGGGA................................................................................................................................................................................................................ 17 2 17 0.06 1 0 0 0 0 0 1

Anti-sense strand reads

CCGTCTCCGTAGTCCTACTCGCGTGGACCGTACCTGTTCTCTTTTGAGAGCATTCATAAAACGTCACGAGGAAGTAAAAAGGAGGTGCCGCGTGTGTGTGTGCGGCAGCCGTCTCATGTGTGTGAGTCGGGCACGCGCTCACACTCACCGTCGACGCGCGTCCGTCGCGCCAGCCGCGCTTTAACTAAAAAGCGCCGTCTTCAAAAGAACTCGGTCGTCCGTGAAAGGAAAGGTGCAGCCCTATTTGTTC
**************************************************........(((((.((((((.............((((((((..........)))))).))..)))))).(((((((.((......))))))))).......(((((((.......)))))))...(((((((......))))))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
.......................................................................................................................................CGCTCACACTCACCGTCGACGC............................................................................................. 22 0 1 1.00 1 0 1 0 0 0
................................................................................GGAGGTGCCGCGTGTGTG........................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0
............................................................................AAAAGGAGGTGCCGAGCGT........................................................................................................................................................... 19 2 4 0.25 1 0 0 1 0 0
...........................................................................AAAAAAGAGGTGCCGAGCGT........................................................................................................................................................... 20 3 14 0.14 2 0 0 0 2 0
.............................................................................AAAGGAGGTGCCGAGCGT........................................................................................................................................................... 18 2 20 0.10 2 2 0 0 0 0
...................................................................................................................ATGTGTGTGTGTCCGGCACCC.................................................................................................................. 21 3 16 0.06 1 0 0 0 0 1
........................................................................................................................................................................................................................................ATGCAGCCCTATTGG... 15 2 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:21774579-21774828 + dsi_6898 G-GCA------------------------GAGGCATCAGGATGAGCGCACCTGGCATGGACAAGAGAAAACTCTCGTAAGTAT--------------------------------------TTT-----------------------------------------GC---AGTG--------------------------------CTCC-----TTCATTT-TTCCTCCACGGCGCACACACA--CA--------------CG-CCGTCGGCAGAGTACACACA--------CTC--------------------AGC-CC-GTG--------CGCGAGT---------GTGAGTGGCAGCTGCGCGCAG-----------GCAGCGCGGTCGGCGC-GAAATTGATTTTTCGCGGCAGAAGTTTTCTTGA-GCC-----AGCAGGCACTTTCCTT----T-------CC-ACGT-------------------CGGGATAAACAAG
droSec2 scaffold_11:2190830-2191079 + G-GCA------------------------GAGGCATCAGGATGAGCGCACCTGGCATGGACAAGAGAAAACTCTCGTAAGTAT--------------------------------------TTT-----------------------------------------GC---AGTG--------------------------------CTCC-----TTCATTT-TTCCTCCACGGCGCACACACA--CA--------------CG-CCGTCGGCAGAGTACACACA--------CTC--------------------AGC-TC-GTG--------CGCGAGT---------GTGAGTGGCAGCTGCGCGCAG-----------GCAGCGCGGTCGGCGC-GAAATTGATTTTTCGCGGCAGAAGTTTTCTTGA-GCC-----AGCAGGCATTTTCCTT----T-------CC-ACGT-------------------CGGGATAAACAAG
dm3 chr3L:22260844-22261087 + G-G------------------------------CATCAGGATGAGCGCACCTGGCATGGACAAGAGAAAACTGTCGTAAGTAT--------------------------------------TTT-----------------------------------------GT---AGTG--------------------------------CTCC-----TTCATTT-TTCCTCCACGGCGCACACACA--CG--------------CG-CCGTCGGCAGAGTACACACA--------CTC--------------------AGC-CC-GTG--------CGCGAGT---------GTGAGTAGCAGCTGCGCGCAG-----------GCAGCGCGGTCGGCGC-GAAATTGATTTTTCGCGGCAGAAGTTTTCTCGA-GCC-----AGCAGGCACTTTCCTT----T-------CC-ACGT-------------------CGGGATAAACAAG
droEre2 scaffold_4784:21931473-21931724 + G-GCA------------------------GAGGCATCAGGATGAGCGCACCTGGCATGGACAAGAGAAAACTCTCGTAAGTAT--------------------------------------TTC-----------------------------------------GC---AGTG--------------------------------CTCC-----TTTAGTT-TTCCCACACGCCGCACACACA--CAC--AC------------CCGTCGACAGAGTACACACA--------CTC--------------------AGC-CC-GTG--------CGCGGGT---------GTGAGTAGCAGCTGCGCGCAG-----------GCAGCGCCGTCGGCGC-GAAATTGATTTTTCGCGGCAGAAGTTTTCTCGA-GCT-----AGCAGGCATTTTCCCT----T-----A--CAGCGT-------------------CGGGATAAACAAG
droYak3 3L:22657091-22657341 + A-GCA------------------------GCAACACTAAAATGAGCGCACCTGGCATGGACAAGAGAAAACTCTCGTAAGTAT--------------------------------------TTT-----------------------------------------GC---AGTG--------------------------------CTCC-----TTCATTT-TTCCTACACGGCGCACACACA--CT--------------CG-CCGTGGGCAGAGTACACACG--------CTC--------------------AGC-CC-GTG--------CGCGAGT---------ATGAGTAGCAGCTGCGCGCAA-----------GCAGCGCTGTCGGCGC-GAAATTGATTTTTCGCGGCAGAAGTTTTCTTGA-GCT-----AGTAGGCATTTTCCTT----T-----G--CAGCGT-------------------CGGGATAAGCAAG
droEug1 scf7180000409472:1109299-1109550 + G-AAA------------------------CAGGCAGCAGGATGAGCGCACCTGGCATGGACAAGAGAAAACTCTCGTAAGTAT--------------------------------------TTT-----------------------------------------GC---AGTG--------------------------------TTCC-----TTCGTTT-TTCCTCCACGGCGCACACACA------------------CT-CCGTCAGCAAAGTACACACA--------C----------------------AGCGCT-ATA--------CGCAAGT---------GTGGGTAGCAGATGCGCGCAG-----------GCAGCGCAGTCGGCGT-GAAATTGATTTTTCGCGGCAGAAATTTTCTTGA-GCC-----ATCAGACATT--CCTT----TTCTTTGCTT-GCTT-------------------CGAGATAGGCCAG
droBia1 scf7180000302377:998432-998673 - G-GCA------------------------CAGGCTTCAGAATGAGCGCACCTGGCATGGACAAGAGAAAACTCTCGTAAGTAT--------------------------------------TGT-----------------------------------------GC---AGAA--------------------------------TTCC-----TTCGTTT-TTCCT-CACTGCGCACACACA------------------TG-CCGTCGGCACGGTGCACACA--------C----------------------AGC-CCAGTG--------TGCGAGT---------GTGAG-AGCAGCTGCGCGCAG-----------GCAGCGCAGTCGGCGT-GAAATTGATTTTTCGCGGCAGAA-TATTCTC-A-G-C-----AGCAGGCATT--TCCT----T----TG-CT-GCGT-------------------CGGGATAAACAAG
droTak1 scf7180000415491:186754-186994 + G-GCA------------------------CAGGCTTCAGAATGAGCGCACCTGGCATGGACAAGAGAAAACTCTCGTAAGTAT--------------------------------------TTT-----------------------------------------GC---AGAA--------------------------------TTCC-----TTCGTTTTTTCCTCCACTGCGCACACACA--CACGCACA------CACG-CCGTCGGCACGGTGCA-------------------------------------------------------CGAGT---------GTGAGTAGCAGCTGCGCGCAG-----------GCAGCGCAGTCGGCGT-GAAATTGATTTTTCGCGGCAGAAATTTTCTCGA-GC------AGCAGGCATT--TCCT----T----AG-CT-GCGT-------------------CGGGATAAACAAG
droEle1 scf7180000491199:520800-521054 - CGGCA------------------------C-GGCGGCACAATGAGCGCCCCTGGCATGGATAAAAGAAAACTCTCGTAAGTAT--------------------------------------T-G-----------------------------------------GCACTAGTG--------------------------------TTCC-----TTCGTTT-TTCCTCCACTGCGCACACACA--CA--------------CA-C---ACGCAGAGTACACTCA----CA--CAC------AAC-----------CGC-CA-GTG--------TGTGCGT---------GTGAGTAGCAGCTGCGCACAG-----------GCAGCGCGGTCGGCGT-CGAATTGATTTTTCGCGGCAGAAGTTTTCTCGA-GCCT----GCCCCGCATTT--ATT----C----CC-TT-GCGT-------------------CGGGATAAACAAG
droRho1 scf7180000777374:212604-212866 + G-GCA------------------------CGAGCGGCAAAATGAGCGCACCTGGCATGGATAAAAGAAAACTCTCGTAAGTAT---------------------------------------TT-----------------------------------------GC---AGTG--------------------------------TTCC-----TTCGTTT-TTCCTCCACTGCGCACTCACA--CA--------------CG-TCGTCGGCAGAGTACACACA--------CAGTCACACA-C-----------TGTTCT-GTG--------TGTGAGT---------GTGAGTAGCAGCTGCGCGCAG-----------GCAGCGCGGTTGGCGT-AGAATTGATTTTTCGCGGCAGAAGTTTTCTCGA-GCCTGCCCAGCAGGCATT--TCCT----T----CG-CT-GTGA-------------------CGGGATAAGCACG
droFic1 scf7180000453945:432048-432321 + G-GAA--------------------AA--CAAGCGTCAAAATGAGCGCACCTGGCATGGACAAGAGAAAACTCTCGTAAGTAT--------------------------------------TTT-----------------------------------------GC---AGAG--------------------------------TTCC-----TTCGTTTTTTCCTCCACTGCGCACACACA--GC--------------CG-CGGTCGGCAGAGTACACACA--------CACGTGG----------------AA---T-GTGTGTACGCGTTTGTGT---------GTGGATAGCAGCTGCGCGCAGACTTCTAAGCGGCAGCGCTGTCGGCGTCGAAATTGATTTTTCGCGGCAGAAGTTTTCTTGG-GCC-----AGCAGGCATATTCCTC----T--------T-GCGT-------------------CGGGATAAACAAG
droKik1 scf7180000302808:575864-576147 + G-CGG---------CGGATTCG--CAACACAGGCATCAGAATGAGTGCACCTGGCATGGACAAGAGAAAACTCTCGTAAGTAGA------------------------------------CTTC-TCAA---CG-------------------------------------CTGC--------AC---------TCCGTC---GCGTTCT-----TAGTTTT-TTCTTCCAACGCGCACGCACA--CAC--ATT---CTGCCGAGACGTCGGCAGAATACACACA--------C----------------------AGC-CT-----------------TT---------ATGGGCAGCAGCTGCGCGCAGGCC-----G-GGCAGCGCAGTCGTCGT-CAAATTGATTTTTCGCGGCAGAAGTTGTA-CAA-GTC-----GGAAGACATT--CCCG----C----AG-AT-GCAT-------------------TGGGATAACCATA
droAna3 scaffold_13337:21997226-21997492 + G-AGA--------------------A---ATACAATCACAATGAGCGCACCTGGCATGGATAAGAGGAAACTCTCGTAAGTAAA------------------------------------ATTC-----------------------------------------GC---ACTGC--------ACCCTTGCC------CC---G-----------TACATTT-TT-TTCAACTGCTCGCACACAACCAC--ACGCCACTACCGACCAGTCAGCAAAGTACATACA--------C-------------------------------------------------------------AAGCAGCTGCGCGCAGGCG-----GTGGCGGCGCAGTCGGCGT-CGAATTGATTTTTCGCGGCAGAAGTTGTA-C-GAC--------TCTGGCATT--CTTTGGTGT----GG-AT-GTGTG---------CGTCTCTCCCGAG---AGCCAG
droBip1 scf7180000396730:466501-466777 + GAGTA------------------------ATAAAATCACAATGAGTGCACCTGGCATGGATAAGAGGAAACTCTCGTAAGTAAA------------------------------------ATTC-----------------------------------------GC---ACTGC--------ACCCTTGGCC----------G-----------TACATTTTTTTTTCAACTGCTCGCATACTAACAC--ACTTTACTACCGACCAGTCAGCAAAGTACATACA--------C-------------------------------------------------------------AAGCAGCTGCGCGCAGGCG-----GTAGCGGCGCAGTCGGCGT-CGAATTGATTTTTCGCGGCAGAAGTTGTA-C-GAC--------TCGGGCATT--CTTTGGTAT----GG-AT-GTATGGATGCGACCCGTCTCTCCCGAG---AGCCAG
dp5 XR_group8:4071207-4071507 + C-GCA--------------------------AGCAGCAAAATGAGCGGCGGAGGCATGGACAAGAGAAAACTCTCGTAAGTAAA------------------------AA--------TAATTC-GCAAG--TT-------------------------------------CTGCGAAATATCCCCCTTGTCTGTTCG--TGC-TATTCC-----TTCTTTTTTTCTTCTGCTGCGCGCACTCA--CAC--ACT------CAGA-CCATCGGTAGAGTACACACT--------AGC--------------------ATT-GT-GTG--------TGTGTGT---------GTGACTAGCAGCTGCGCGCAGACT-----GCGGCAGCGCAGTCGGCGT-TTAATTGATTTTTCGCGGCAGAAGTTGTA-C-GG--C-----GTATGGCATT--CCTT----T----GG-AT-GTGTG---------------TCCCGGGATAAACAAG
droPer2 scaffold_29:303383-303691 + C-GCA--------------------------AGCAGCAAAATGAGCGGCGGAGGCATGGACAAGAGAAAACTCTCGTAAGTAAA------------------------AA--------TAATTC-GCAAG--TT-------------------------------------CTGCGAAATATCCCCCTTGTCTGTTCG--TGC-TATTCC-----TTCTTTTTTTCTTCTGCTGCGCGCACTCA--CAC--ACT------CAGA-CCATCGGTAGAGTACACACT--------AGC--------------------ATT-GT-GTGTGTGTGTGTGTGTGT---------GTGACTAGCAGCTGCGCGCAGACT-----GCGGCAGCGCAGTCGGCGT-TTAATTGATTTTTCGCGGCAGAAGTTGTA-C-GG--C-----GTATGGCATT--CCTT----T----GG-AT-GTGTG---------------TCCCGGGATAAACAAG
droWil2 scf2_1100000004511:824425-824730 + G-CGG---------C-------AACAACAACGGCGCCAATATGAGCGGAGGTGGCATGGACAAAAGAAAACTCTCGTAAGTATACAAATCGAAAGGAAAAAATAGAAAAACAAATAGAAAATTC-GCAAAAATAATAAGAAGCAAAAACGCTGCTGACGCTTGTGGT---AGTAC---------------TCTCTTCC--TCC-TGTTACATATTTTTTTTC-TTCTT--TCTGCGCACACATATACA--------------AT-ACATACGCAGGCTTT---CACACACACACAA--------------------AGC-AA-ATG--------CC--------------GAGGCTAGCAGCTGCGCGTTG-----------GCAGCGCAGTTGGCGT-CAAATTGATTTTTCGCGGCAGAA--------------------------------------------------------------------------------------
droGri2 scaffold_15110:14634732-14634967 + A-GCATTAAAGAGGCACGTGCCCAGAA--CAATTGCAAACATGAGTGGCGGTGGCATGGATAAAAGAAAACTGTCGTAAGTACA------------------------------------ATTTCACAAA--TG-------------------------------------ATTT-----------------TCTTCTTC---GTATGCC-----TTTTTTT-TTCTTTC--TGCGCACACACGTACAC--AA-------------------------------G--------CAAGCGCACA-GTGTGCAGAGACGGC-AG-ATG--------CGCA-TTGCCAACGCCAACGTTA--------GCAGCG-----------GCAGCGCAGTCGACGT-TCAATTGATTTTCCGC---------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
G-GCA------------------------GAGGCATCAGGATGAGCGCACCTGGCATGGACAAGAGAAAACTCTCGTAAGTAT--------------------------------------TTT-----------------------------------------GC---AGTG--------------------------------CTCC-----TTCATTT-TTCCTCCACGGCGCACACACA--CA--------------CG-CCGTCGGCAGAGTACACACA--------CTC--------------------AGC-CC-GTG--------CGCGAGT---------GTGAGTGGCAGCTGCGCGCAG-----------GCAGCGCGGTCGGCGC-GAAATTGATTTTTCGCGGCAGAAGTTTTCTTGA-GCC-----AGCAGGCACTTTCCTT----T-------CC-ACGT-------------------CGGGATAAACAAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTT----T-------CC-ACGT-------------------CGGGATA......1814.00440000000000000000
.......................................................ATGGACAAGAGAAAACTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200200000000000000
......................................GGATGAGCGCACCTGGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
.......................................................ATGGACAAGAGAAAACTCTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................GCGGTCGGCGC-GAAATTGATTTTTCG..............................................................................................2611.00100000000001000000
........................................................TGGACAAGAGAAAACTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000001000000000
droSec2
G-GCA------------------------GAGGCATCAGGATGAGCGCACCTGGCATGGACAAGAGAAAACTCTCGTAAGTAT--------------------------------------TTT-----------------------------------------GC---AGTG--------------------------------CTCC-----TTCATTT-TTCCTCCACGGCGCACACACA--CA--------------CG-CCGTCGGCAGAGTACACACA--------CTC--------------------AGC-TC-GTG--------CGCGAGT---------GTGAGTGGCAGCTGCGCGCAG-----------GCAGCGCGGTCGGCGC-GAAATTGATTTTTCGCGGCAGAAGTTTTCTTGA-GCC-----AGCAGGCATTTTCCTT----T-------CC-ACGT-------------------CGGGATAAACAAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...CA------------------------GAGGCATCAGGATGAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020110
........................................ATGAGCGCACCTGGCATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000
........................................ATGAGCGCACCTGGCATGGACAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001
..........................................................................................................................................................................................................................................................................................ACA--------CTC--------------------AGC-TC-GTG--------CGCG..........................................................................................................................................................................1811.0010001
....A------------------------GAGGCATCAGGATGAGCGCACCTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
................................................ACCTGGCATGGACAAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
....A------------------------GAGGCATCAGGATGAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
................................................ACCTGGCATGGACAAGAGAAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
.......................................GATGAGCGCACCTGGCATGGACAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
................................GCATCAGGATGAGCGCACCTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
.........................................TGAGCGCACCTGGCATGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
dm3
G-G------------------------------CATCAGGATGAGCGCACCTGGCATGGACAAGAGAAAACTGTCGTAAGTAT--------------------------------------TTT-----------------------------------------GT---AGTG--------------------------------CTCC-----TTCATTT-TTCCTCCACGGCGCACACACA--CG--------------CG-CCGTCGGCAGAGTACACACA--------CTC--------------------AGC-CC-GTG--------CGCGAGT---------GTGAGTAGCAGCTGCGCGCAG-----------GCAGCGCGGTCGGCGC-GAAATTGATTTTTCGCGGCAGAAGTTTTCTCGA-GCC-----AGCAGGCACTTTCCTT----T-------CC-ACGT-------------------CGGGATAAACAAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
G-G------------------------------CATCAGGATGAGCGCACCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................21110.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TGGACAAGAGAAAACTGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................ACACACA--CG--------------CG-CCGTCGGCAGAG.......................................................................................................................................................................................................................................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000
.......................................................................................................................................................................................................................................................................................................C--------------------AGC-CC-GTG--------CGCGAGT---------GTGAGT........................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000010000000000100000
......................................................................................................................................................................................................................................................................................................TC--------------------AGC-CC-GTG--------CGCGAGT---------GTG...........................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................C--------------------AGC-CC-GTG--------CGCGAGT---------GTGAG.........................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000
........................................ATGAGCGCACCTGGCATGGACAAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100000000000
................................................ACCTGGCATGGACAAGAGAAAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................GAGCGCACCTGGCATGGACAAGAGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................ACACA--CG--------------CG-CCGTCGGCA..........................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000001000
..................................ATCAGGATGAGCGCACCTGGCATGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000
........................................................TGGACAAGAGAAAACTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................ATGGACAAGAGAAAACTGTCGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TGAGCGCACCTGGCATGGACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................ACACACA--CG--------------CG-CCGTCGGCAG.........................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000
........................................ATGAGCGCACCTGGCATGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................CAGGATGAGCGCACCTGGCATGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CATCAGGATGAGCGCACCTGGCAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................GCATGGACAAGAGAAAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................AGC-CC-GTG--------CGCGAGT---------GTGAGTAGCAGCT.................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................AGGATGAGCGCACCTGGCAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................CACACA--------CTC--------------------AGC-CC-GTG--------C.............................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................ACACA--------CTC--------------------AGC-CC-GTG--------CG............................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................TC--------------------AGC-CC-GTG--------CGCGAGT---------GTGAGT........................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.............................................................................................................................................................................................................................................................................................................................GC-CC-GTG--------CGCGAGT---------GTGAG.........................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................CCGTCGGCAGAGTACACACA--------C......................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................TCAGGATGAGCGCACCTGGCATGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................GGCATGGACAAGAGAAAACTGTCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................CACCTGGCATGGACAAGAGAAAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................ATGGACAAGAGAAAACTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
G-G------------------------------CATCAGGATGAGCGCACCTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........................................ATGAGCGCACCTGGCATGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................ACACACA--CG--------------CG-CCGTCGGCAGAGT......................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...........................................................................................................................................................................................................................................GCACACACA--CG--------------CG-CCGTCGGCAGAG.......................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TCAGGATGAGCGCACCTGGCATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................CAGGATGAGCGCACCTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................GCGGTCGGCGC-GAAATTGATTT..................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
......................................................CATGGACAAGAGAAAACTGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................ACACACA--CG--------------CG-CCGTCGGCAGA........................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................................................................................................CCACGGCGCACACACA--CG--------------CG-...................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CATCAGGATGAGCGCACCTGGCATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TGGCATGGACAAGAGAAAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
................................................ACCTGGCATGGACAAGAGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................TCGGCAGAGTACACACA--------CTC--------------------AGC-C...........................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TCAGGATGAGCGCACCTGGCATGGACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................C--------------------AGC-CC-GTG--------CGCGAGT---------GTGAGTG.......................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.........................................TGAGCGCACCTGGCATGGACAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CATCAGGATGAGCGCACCTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................AGC-CC-GTG--------CGCGAGT---------GTGAG.........................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CATCAGGATGAGCGCACCTGGCATGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................GCGCACCTGGCATGGACAAGAGAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TGGCATGGACAAGAGAAAACTGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TGAGCGCACCTGGCATGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...................................TCAGGATGAGCGCACCTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.......................................GATGAGCGCACCTGGCATGGACAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...........................................AGCGCACCTGGCATGGACAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TCAGGATGAGCGCACCTGGCATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................TGGCATGGACAAGAGAAAACTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
G-G------------------------------CATCAGGATGAGCGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................CACACACA--CG--------------CG-CCGTCGGCAGA........................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................CATCAGGATGAGCGCACCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.................................CATCAGGATGAGCGCACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................AGC-CC-GTG--------CGCGAGT---------GTGAGT........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
........................................................TGGACAAGAGAAAACTGTCGTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................ATGGACAAGAGAAAACTGTCGTAAGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................CATCAGGATGAGCGCACCTGGCATGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................GTG--------------------------------CTCC-----TTCATTT-TTCCTCCACGGCGCA..............................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................ATCAGGATGAGCGCACCTGGCATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................TGGCATGGACAAGAGAAAACTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................CATCAGGATGAGCGCACCTGGCATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................GCATGGACAAGAGAAAACTGTCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
G-G------------------------------CATCAGGATGAGCGCACCTGGCAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CAAGAGAAAACTGTCGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................18100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
G-GCA------------------------GAGGCATCAGGATGAGCGCACCTGGCATGGACAAGAGAAAACTCTCGTAAGTAT--------------------------------------TTC-----------------------------------------GC---AGTG--------------------------------CTCC-----TTTAGTT-TTCCCACACGCCGCACACACA--CAC--AC------------CCGTCGACAGAGTACACACA--------CTC--------------------AGC-CC-GTG--------CGCGGGT---------GTGAGTAGCAGCTGCGCGCAG-----------GCAGCGCCGTCGGCGC-GAAATTGATTTTTCGCGGCAGAAGTTTTCTCGA-GCT-----AGCAGGCATTTTCCCT----T-----A--CAGCGT-------------------CGGGATAAACAAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................GAGCGCACCTGGCATGGACAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
....................................................GGCATGGACAAGAGAAAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
........................................ATGAGCGCACCTGGCATGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
..................................ATCAGGATGAGCGCACCTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
....................................CAGGATGAGCGCACCTGGCATGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
.........................................TGAGCGCACCTGGCATGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000
................................GCATCAGGATGAGCGCACCTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
.......................................GATGAGCGCACCTGGCATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
.......................................GATGAGCGCACCTGGCATGGACAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
....A------------------------GAGGCATCAGGATGAGCGCACCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
..................................................CTGGCATGGACAAGAGAAAACTCTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
droYak3
A-GCA------------------------GCAACACTAAAATGAGCGCACCTGGCATGGACAAGAGAAAACTCTCGTAAGTAT--------------------------------------TTT-----------------------------------------GC---AGTG--------------------------------CTCC-----TTCATTT-TTCCTACACGGCGCACACACA--CT--------------CG-CCGTGGGCAGAGTACACACG--------CTC--------------------AGC-CC-GTG--------CGCGAGT---------ATGAGTAGCAGCTGCGCGCAA-----------GCAGCGCTGTCGGCGC-GAAATTGATTTTTCGCGGCAGAAGTTTTCTTGA-GCT-----AGTAGGCATTTTCCTT----T-----G--CAGCGT-------------------CGGGATAAGCAAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................AAAATGAGCGCACCTGGCATGGACT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000100000
.......................................AATGAGCGCACCTGGCATGGACAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
..............................................GCACCTGGCATGGACAAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
...............................AACACTAAAATGAGCGCACCTGGCATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2721.00200000020000
..................................ACTAAAATGAGCGCACCTGGCATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50100000010000
.................................................................................AT--------------------------------------TTT-----------------------------------------GC---AGTG--------------------------------CTCC-----TTCATT...............................................................................................................................................................................................................................................................................................2120.50101000000000
......................................................................................................................................................................................................................................................................................ACACACG--------CTC--------------------AGC-CC-GTG--------C.............................................................................................................................................................................1920.50100100000000
droEug1
G-AAA------------------------CAGGCAGCAGGATGAGCGCACCTGGCATGGACAAGAGAAAACTCTCGTAAGTAT--------------------------------------TTT-----------------------------------------GC---AGTG--------------------------------TTCC-----TTCGTTT-TTCCTCCACGGCGCACACACA------------------CT-CCGTCAGCAAAGTACACACA--------C----------------------AGCGCT-ATA--------CGCAAGT---------GTGGGTAGCAGATGCGCGCAG-----------GCAGCGCAGTCGGCGT-GAAATTGATTTTTCGCGGCAGAAATTTTCTTGA-GCC-----ATCAGACATT--CCTT----TTCTTTGCTT-GCTT-------------------CGAGATAGGCCAGSizeHit CountTotal NormTotal
No Reads
droBia1
G-GCA------------------------CAGGCTTCAGAATGAGCGCACCTGGCATGGACAAGAGAAAACTCTCGTAAGTAT--------------------------------------TGT-----------------------------------------GC---AGAA--------------------------------TTCC-----TTCGTTT-TTCCT-CACTGCGCACACACA------------------TG-CCGTCGGCACGGTGCACACA--------C----------------------AGC-CCAGTG--------TGCGAGT---------GTGAG-AGCAGCTGCGCGCAG-----------GCAGCGCAGTCGGCGT-GAAATTGATTTTTCGCGGCAGAA-TATTCTC-A-G-C-----AGCAGGCATT--TCCT----T----TG-CT-GCGT-------------------CGGGATAAACAAGSizeHit CountTotal NormTotal
No Reads
droTak1
G-GCA------------------------CAGGCTTCAGAATGAGCGCACCTGGCATGGACAAGAGAAAACTCTCGTAAGTAT--------------------------------------TTT-----------------------------------------GC---AGAA--------------------------------TTCC-----TTCGTTTTTTCCTCCACTGCGCACACACA--CACGCACA------CACG-CCGTCGGCACGGTGCA-------------------------------------------------------CGAGT---------GTGAGTAGCAGCTGCGCGCAG-----------GCAGCGCAGTCGGCGT-GAAATTGATTTTTCGCGGCAGAAATTTTCTCGA-GC------AGCAGGCATT--TCCT----T----AG-CT-GCGT-------------------CGGGATAAACAAGSizeHit CountTotal NormTotal
No Reads
droEle1
CGGCA------------------------C-GGCGGCACAATGAGCGCCCCTGGCATGGATAAAAGAAAACTCTCGTAAGTAT--------------------------------------T-G-----------------------------------------GCACTAGTG--------------------------------TTCC-----TTCGTTT-TTCCTCCACTGCGCACACACA--CA--------------CA-C---ACGCAGAGTACACTCA----CA--CAC------AAC-----------CGC-CA-GTG--------TGTGCGT---------GTGAGTAGCAGCTGCGCACAG-----------GCAGCGCGGTCGGCGT-CGAATTGATTTTTCGCGGCAGAAGTTTTCTCGA-GCCT----GCCCCGCATTT--ATT----C----CC-TT-GCGT-------------------CGGGATAAACAAGSizeHit CountTotal NormTotal
No Reads
droRho1
G-GCA------------------------CGAGCGGCAAAATGAGCGCACCTGGCATGGATAAAAGAAAACTCTCGTAAGTAT---------------------------------------TT-----------------------------------------GC---AGTG--------------------------------TTCC-----TTCGTTT-TTCCTCCACTGCGCACTCACA--CA--------------CG-TCGTCGGCAGAGTACACACA--------CAGTCACACA-C-----------TGTTCT-GTG--------TGTGAGT---------GTGAGTAGCAGCTGCGCGCAG-----------GCAGCGCGGTTGGCGT-AGAATTGATTTTTCGCGGCAGAAGTTTTCTCGA-GCCTGCCCAGCAGGCATT--TCCT----T----CG-CT-GTGA-------------------CGGGATAAGCACGSizeHit CountTotal NormTotal
No Reads
droFic1
G-GAA--------------------AA--CAAGCGTCAAAATGAGCGCACCTGGCATGGACAAGAGAAAACTCTCGTAAGTAT--------------------------------------TTT-----------------------------------------GC---AGAG--------------------------------TTCC-----TTCGTTTTTTCCTCCACTGCGCACACACA--GC--------------CG-CGGTCGGCAGAGTACACACA--------CACGTGG----------------AA---T-GTGTGTACGCGTTTGTGT---------GTGGATAGCAGCTGCGCGCAGACTTCTAAGCGGCAGCGCTGTCGGCGTCGAAATTGATTTTTCGCGGCAGAAGTTTTCTTGG-GCC-----AGCAGGCATATTCCTC----T--------T-GCGT-------------------CGGGATAAACAAGSizeHit CountTotal NormTotal
No Reads
droKik1
G-CGG---------CGGATTCG--CAACACAGGCATCAGAATGAGTGCACCTGGCATGGACAAGAGAAAACTCTCGTAAGTAGA------------------------------------CTTC-TCAA---CG-------------------------------------CTGC--------AC---------TCCGTC---GCGTTCT-----TAGTTTT-TTCTTCCAACGCGCACGCACA--CAC--ATT---CTGCCGAGACGTCGGCAGAATACACACA--------C----------------------AGC-CT-----------------TT---------ATGGGCAGCAGCTGCGCGCAGGCC-----G-GGCAGCGCAGTCGTCGT-CAAATTGATTTTTCGCGGCAGAAGTTGTA-CAA-GTC-----GGAAGACATT--CCCG----C----AG-AT-GCAT-------------------TGGGATAACCATASizeHit CountTotal NormTotal
No Reads
droAna3
G-AGA--------------------A---ATACAATCACAATGAGCGCACCTGGCATGGATAAGAGGAAACTCTCGTAAGTAAA------------------------------------ATTC-----------------------------------------GC---ACTGC--------ACCCTTGCC------CC---G-----------TACATTT-TT-TTCAACTGCTCGCACACAACCAC--ACGCCACTACCGACCAGTCAGCAAAGTACATACA--------C-------------------------------------------------------------AAGCAGCTGCGCGCAGGCG-----GTGGCGGCGCAGTCGGCGT-CGAATTGATTTTTCGCGGCAGAAGTTGTA-C-GAC--------TCTGGCATT--CTTTGGTGT----GG-AT-GTGTG---------CGTCTCTCCCGAG---AGCCAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................GGCATGGATAAGAGGAAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002010010
.................................AATCACAATGAGCGCACCTGGCAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
...GA--------------------A---ATACAATCACAATGAGCGCACCTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
...................................................TGGCATGGATAAGAGGAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
....................................CACAATGAGCGCACCTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.........................................TGAGCGCACCTGGCATGGATAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
G-AGA--------------------A---ATACAATCACAATGAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
...GA--------------------A---ATACAATCACAATGAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
.............................ATACAATCACAATGAGCGCACCTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
........................................ATGAGCGCACCTGGCATGGATAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100
droBip1
GAGTA------------------------ATAAAATCACAATGAGTGCACCTGGCATGGATAAGAGGAAACTCTCGTAAGTAAA------------------------------------ATTC-----------------------------------------GC---ACTGC--------ACCCTTGGCC----------G-----------TACATTTTTTTTTCAACTGCTCGCATACTAACAC--ACTTTACTACCGACCAGTCAGCAAAGTACATACA--------C-------------------------------------------------------------AAGCAGCTGCGCGCAGGCG-----GTAGCGGCGCAGTCGGCGT-CGAATTGATTTTTCGCGGCAGAAGTTGTA-C-GAC--------TCGGGCATT--CTTTGGTAT----GG-AT-GTATGGATGCGACCCGTCTCTCCCGAG---AGCCAGSizeHit CountTotal NormTotal
No Reads
dp5
C-GCA--------------------------AGCAGCAAAATGAGCGGCGGAGGCATGGACAAGAGAAAACTCTCGTAAGTAAA------------------------AA--------TAATTC-GCAAG--TT-------------------------------------CTGCGAAATATCCCCCTTGTCTGTTCG--TGC-TATTCC-----TTCTTTTTTTCTTCTGCTGCGCGCACTCA--CAC--ACT------CAGA-CCATCGGTAGAGTACACACT--------AGC--------------------ATT-GT-GTG--------TGTGTGT---------GTGACTAGCAGCTGCGCGCAGACT-----GCGGCAGCGCAGTCGGCGT-TTAATTGATTTTTCGCGGCAGAAGTTGTA-C-GG--C-----GTATGGCATT--CCTT----T----GG-AT-GTGTG---------------TCCCGGGATAAACAAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................ATGGACAAGAGAAAACTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0021100000000
............................................GCGGCGGAGGCATGGACAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.............................................CGGCGGAGGCATGGACAAGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000000
.................................................................................................................................................................................................................................CTTCTGCTGCGCGCACTCA--......................................................................................................................................................................................................................................................................1911.0010000010000
.....................................AAAATGAGCGGCGGAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
...........................................AGCGGCGGAGGCATGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
.....................................AAAATGAGCGGCGGAGGCATGGACAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000000
.......................................AATGAGCGGCGGAGGCATGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
........................................ATGAGCGGCGGAGGCATGGACAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
....................................................GGCATGGACAAGAGAAAACTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...........................................AGCGGCGGAGGCATGGACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
droPer2
C-GCA--------------------------AGCAGCAAAATGAGCGGCGGAGGCATGGACAAGAGAAAACTCTCGTAAGTAAA------------------------AA--------TAATTC-GCAAG--TT-------------------------------------CTGCGAAATATCCCCCTTGTCTGTTCG--TGC-TATTCC-----TTCTTTTTTTCTTCTGCTGCGCGCACTCA--CAC--ACT------CAGA-CCATCGGTAGAGTACACACT--------AGC--------------------ATT-GT-GTGTGTGTGTGTGTGTGT---------GTGACTAGCAGCTGCGCGCAGACT-----GCGGCAGCGCAGTCGGCGT-TTAATTGATTTTTCGCGGCAGAAGTTGTA-C-GG--C-----GTATGGCATT--CCTT----T----GG-AT-GTGTG---------------TCCCGGGATAAACAAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................AGCAAAATGAGCGGCGGAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.004400000
.......................................................ATGGACAAGAGAAAACTCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003300000
......................................................CATGGACAAGAGAAAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
....................................CAAAATGAGCGGCGGAGGCATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
..................................AGCAAAATGAGCGGCGGAGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
...................................GCAAAATGAGCGGCGGAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
....................................CAAAATGAGCGGCGGAGGCATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..GCA--------------------------AGCAGCAAAATGAGCGGCGGAGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
droWil2
G-CGG---------C-------AACAACAACGGCGCCAATATGAGCGGAGGTGGCATGGACAAAAGAAAACTCTCGTAAGTATACAAATCGAAAGGAAAAAATAGAAAAACAAATAGAAAATTC-GCAAAAATAATAAGAAGCAAAAACGCTGCTGACGCTTGTGGT---AGTAC---------------TCTCTTCC--TCC-TGTTACATATTTTTTTTC-TTCTT--TCTGCGCACACATATACA--------------AT-ACATACGCAGGCTTT---CACACACACACAA--------------------AGC-AA-ATG--------CC--------------GAGGCTAGCAGCTGCGCGTTG-----------GCAGCGCAGTTGGCGT-CAAATTGATTTTTCGCGGCAGAA--------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................GGCATGGACAAAAGAAAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00220000
.....................................................GCATGGACAAAAGAAAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
....................................CAATATGAGCGGAGGTGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..................................................GTGGCATGGACAAAAGAAAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
..................................GCCAATATGAGCGGAGGTGGCATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
........................................ATGAGCGGAGGTGGCATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
..................................GCCAATATGAGCGGAGGTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.................................................GGTGGCATGGACAAAAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001
.....................................................GCATGGACAAAAGAAAACTCTCCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
..............C-------AACAACAACGGCGCCAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
............................AACGGCGCCAATATGAGCGGAGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
................................GCGCCAATATGAGCGGAGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
......................................................CATGGACAAAAGAAAACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
........................................ATGAGCGGAGGTGGCATGGACAAAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
......................................ATATGAGCGGAGGTGGCATGGACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
.....................................................................................................................................................................GT---AGTAC---------------TCTCTTCC--TCC-TGT.............................................................................................................................................................................................................................................................................................................2111.00100010
..........................................GAGCGGAGGTGGCATGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
....................................CAATATGAGCGGAGGTGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
.....................................AATATGAGCGGAGGTGGCATGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
droGri2
A-GCATTAAAGAGGCACGTGCCCAGAA--CAATTGCAAACATGAGTGGCGGTGGCATGGATAAAAGAAAACTGTCGTAAGTACA------------------------------------ATTTCACAAA--TG-------------------------------------ATTT-----------------TCTTCTTC---GTATGCC-----TTTTTTT-TTCTTTC--TGCGCACACACGTACAC--AA-------------------------------G--------CAAGCGCACA-GTGTGCAGAGACGGC-AG-ATG--------CGCA-TTGCCAACGCCAACGTTA--------GCAGCG-----------GCAGCGCAGTCGACGT-TCAATTGATTTTCCGC---------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...........................................AGTGGCGGTGGCATGGATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00211
.........................................TGAGTGGCGGTGGCATGGATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
.......AAAGAGGCACGTGCCCAGAA--...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
......................................ACATGAGTGGCGGTGGCATGGATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110
.....................................AACATGAGTGGCGGTGGCATGGATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110
.......AAAGAGGCACGTGCCCAGAA--C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101
.........................................TGAGTGGCGGTGGCATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
..GCATTAAAGAGGCACGTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
.................................................GGTGGCATGGATAAAAGAAAACTGTCCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00110
............................................GTGGCGGTGGCATGGATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110

Generated: 05/18/2015 at 04:53 PM