ID:dsi_6681 |
Coordinate:3l:8314237-8314298 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [3l_8314067_8314236_+]; CDS [3l_8314067_8314236_+]; CDS [3l_8314299_8315306_+]; exon [3l_8314299_8315306_+]; intron [3l_8314237_8314298_+]
No Repeatable elements found
| ##################################################--------------------------------------------------------------################################################## TAGCCGTGGGTACGATGACCGGCGATGCCCTGCTGCACTTGCTGCCTCATGTGAGTAAAGCTGATAATTCTGATGGGTTCGTCCGAAGCCATGACTAACGTTAAACTTATAGTCTCTTGCAGGCCAGGATGAGCGGGGGATGATCATGAAAGGACTGGGGTG **************************************************((((((..(((...........((((.(((....))).)))).......)))..))))))..************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553488 RT_0-2 hours eggs |
M053 female body |
SRR902009 testis |
|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................................GATCATGAAAGGACTGGGGT. | 20 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 |
| .............................................................................................................................AGGATGAGCGGGGGATGATCATGAA............ | 25 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .............................................................................................................................AGGATGAGCGGGGGATAA................... | 18 | 1 | 2 | 0.50 | 1 | 0 | 0 | 1 |
| .................................................................................................................................TGAACGGGGGGTGATC................. | 16 | 2 | 12 | 0.08 | 1 | 1 | 0 | 0 |
|
ATCGGCACCCATGCTACTGGCCGCTACGGGACGACGTGAACGACGGAGTACACTCATTTCGACTATTAAGACTACCCAAGCAGGCTTCGGTACTGATTGCAATTTGAATATCAGAGAACGTCCGGTCCTACTCGCCCCCTACTAGTACTTTCCTGACCCCAC
**************************************************((((((..(((...........((((.(((....))).)))).......)))..))))))..************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553488 RT_0-2 hours eggs |
SRR618934 dsim w501 ovaries |
M053 female body |
SRR553485 Chicharo_3 day-old ovaries |
SRR553486 Makindu_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|---|
| ..............TACTGACCGCTGCGGGATGA................................................................................................................................ | 20 | 3 | 4 | 0.25 | 1 | 1 | 0 | 0 | 0 | 0 |
| ......................................AACCACGGAGGACACTCCTT........................................................................................................ | 20 | 3 | 5 | 0.20 | 1 | 0 | 1 | 0 | 0 | 0 |
| .........................................................................CCCCGAGCAGGCTTC.......................................................................... | 15 | 2 | 20 | 0.10 | 2 | 0 | 0 | 0 | 1 | 1 |
| .......................................ACCACGGAGAACACTCTTT........................................................................................................ | 19 | 3 | 18 | 0.06 | 1 | 0 | 0 | 1 | 0 | 0 |
| ..................GGCCGCTGCGGGTCGACGT............................................................................................................................. | 19 | 2 | 20 | 0.05 | 1 | 0 | 1 | 0 | 0 | 0 |
Generated: 04/24/2015 at 10:48 AM