ID:

dsi_6675

 Coordinate:

3r:17873555-17873809 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.1

Flybase annnotation

exon [3r_17873810_17873925_-]; CDS [3r_17873810_17873925_-]; exon [3r_17872799_17873554_-]; CDS [3r_17872799_17873554_-]; intron [3r_17873555_17873809_-]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CCGAGAAGGGCATGGCCCTGCTGGTCAACCATGGCATCTCCGATGAGAAGGTAAGACAACTAGTAATATATACACTTAAGATTAGGAAAGAAATGGGTTTTTATTCACTATTGATTAAATACCAAAATACGTCATTGCCAAAGCAGCAAATCTAAAACCGCATTCGTATCAGCCTGATAATAGTTGAAATTAATAGCTTCTATTCCCGGGGGAAACGTATCTGTAGAGATAGGACAAAAATTTAGTTTCAAGGTTATTTTACTCGTTTTCACTAATGCAAAGTTTCCCCATTGTCTTTGGATCAGCTCAAGACTGCCTGGGATCACCTGGATGACTTCGTGAACCTGCCGCCGGA
************************************************************************************************************************************************************************************************************************************************((....(((((((..(((((...((((......)))).)))))..)).........)))))..))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR553488
RT_0-2 hours eggs
 M024
male body		 M053
female body
 O002
Head
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
...........................................................................................................................................................................................................................................................................................TTCCCCATTGTCTTTGGATCAG.................................................. 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................GATGACTTCGTGAACCTGCC...... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................TTTAGTTTCAAGGTTATTTTACT............................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................GCAGCAAATCTAAAACCGCA................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................CACCTGGATGACCTCGTGAACCTGC....... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................CACCTGGATGACTTCGTGAACCTGC....... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................................................................................................................................GATGACTTCGTGAACCTGCCGCC... 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
......................................................................................................................................................................................................................................................................................................................................CCGGATGACTTCGTGA............. 16 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................................................................................................GGATGACTTCGTGAACCTGCC...... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................ACCTGGATGACTTCGTGAACCTGCC...... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...AGAAGGGCATGGCCCTGCTGGTC......................................................................................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................TGGGTTTTGATGCACTATT................................................................................................................................................................................................................................................... 19 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................CACCTGGATGACTTCGTGAAC........... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................GTCAACCATGGCATCTCCGATGA..................................................................................................................................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................CCGGGGATCACTTGGCTGA..................... 19 3 20 0.65 13 0 0 0 0 0 0 0 13 0 0
.................................................................................TTAGGAAAGAACTGTGT................................................................................................................................................................................................................................................................. 17 2 16 0.31 5 0 5 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................CTGGATGACGTCGTGA............. 16 1 4 0.25 1 0 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................CTACTTTCAACGTTATTTTACT............................................................................................ 22 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................CCGGGGATCACTTGGCTGAC.................... 20 3 6 0.17 1 0 0 0 0 0 0 0 1 0 0
............TGGCCCTGTTGGTGAACC..................................................................................................................................................................................................................................................................................................................................... 18 2 6 0.17 1 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................................................................CCGGATGACTTCGTG.............. 15 1 8 0.13 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................................AAAGTTTCCTATTTGTCTTTGG....................................................... 22 3 8 0.13 1 0 0 0 0 0 0 0 0 1 0
.......................................................................................................................................................................................................................................................................................................................................TGGATGACGTCGTGA............. 15 1 8 0.13 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................GCATTCGTATCGGCATG................................................................................................................................................................................... 17 2 20 0.10 2 0 0 0 0 0 0 0 0 0 2
......................................................................................................................................................................................................................................................................................................................................CTGGATGACGTCGTG.............. 15 1 11 0.09 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................TATTGACTGTTGATGAAATA.......................................................................................................................................................................................................................................... 20 3 15 0.07 1 0 0 0 0 0 0 0 1 0 0
........................................................................................................................................................................................................................................................................................................................................GGATGACTTCGTGAGA........... 16 2 18 0.06 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................AGACCGCCTGGGAACA.............................. 16 2 20 0.05 1 0 0 0 0 0 0 0 1 0 0
....................................................................................................................................................................................................................................................................................................................................TACCGGATGACTTCGTGA............. 18 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................ACCGGATGACTTCGTGAG............ 18 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

GGCTCTTCCCGTACCGGGACGACCAGTTGGTACCGTAGAGGCTACTCTTCCATTCTGTTGATCATTATATATGTGAATTCTAATCCTTTCTTTACCCAAAAATAAGTGATAACTAATTTATGGTTTTATGCAGTAACGGTTTCGTCGTTTAGATTTTGGCGTAAGCATAGTCGGACTATTATCAACTTTAATTATCGAAGATAAGGGCCCCCTTTGCATAGACATCTCTATCCTGTTTTTAAATCAAAGTTCCAATAAAATGAGCAAAAGTGATTACGTTTCAAAGGGGTAACAGAAACCTAGTCGAGTTCTGACGGACCCTAGTGGACCTACTGAAGCACTTGGACGGCGGCCT
**************************************************((....(((((((..(((((...((((......)))).)))))..)).........)))))..))************************************************************************************************************************************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 GSM343915
embryo
 SRR902009
testis
 M023
head
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
...............................................................................................................................................................................................................................................................................................................TCGAGTTCTGACCCACCCTAT............................... 21 3 1 1.00 1 0 1 0 0 0 0 0
...............................................................................................................................................................................................................................................TAAATCAGAGTTCCAATA.................................................................................................. 18 1 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................................................................TTTTGGCGTAAGGATAGGCG...................................................................................................................................................................................... 20 2 2 0.50 1 0 0 1 0 0 0 0
.......................................................................................................................................................................................................................................................................................................CAACCTAGTCGAGTTGTCAC........................................ 20 3 5 0.40 2 0 0 0 1 1 0 0
....................................................................................................................................................................................................................................................................................................................TTTTGACGGACCCTAGTTCA........................... 20 3 12 0.08 1 0 0 1 0 0 0 0
...................................................................................................................................AGTAACGGTTTCGGC................................................................................................................................................................................................................. 15 1 19 0.05 1 0 0 0 0 0 1 0
..................................................................................................................................................................AAGCGTAGTCGGACTTT................................................................................................................................................................................ 17 2 20 0.05 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:17873505-17873859 - dsi_6675 CCGAGAAGGGCATGGCCCTGCTGGTCAACCATGGCATCTCCGATGAGAAGGTAAGACAACTAGTAATA--TATACACTTAAGATTAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA-----AAGAA-A-TG-------GGTTTTTA---TTCACTATTGATTAAATACCAAAAT------------------------------------ACGT-------------------CATTGCCAAAGCA---------------------------------------------------------GC---------AAATCTAA---AACCGCA-------------------------------TTCGTATCAGCCTGATAATAGTTGAAATTAA----TAGCTTCTATTCCCGGGGGAAACGTATCTGTAGA--GATAGGACAAAAATTTAGTTTCAAGGTTATTTTAC------------------------------------------TCGTTTTCACT--------------------------------------------------------------------AATGCAAAGTTTCCCCATTGTCTTTGGATCAGCTCAAGACTGCCTGGGATCACCTGGATGACTTCGTGAACCTGCCGCCGGA
droSec2 scaffold_0:18700831-18701184 - CCGAGAAGGGCATGGCCCTGCTGGTCAACCATGGCATCTCCGATGAGAAGGTAAGACAACTAGTAATA--TATACACTTAAGATTAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA-----AAGAG-A-TG-------GGTTT-TA---TTCACTATTGATTAAATGCCAAAAT------------------------------------ACGT-------------------CATTGCCAAAGCA---------------------------------------------------------GC---------AAATCTAA---AACCGCA-------------------------------TTCATATCAGCCTGATAATAGTTGAAATTAA----TAGCTTCTATTCCCGGGGGAAACGTATCTGTAGA--GATAAGACAAAAATTTAGTTTCAAGGTTATTTTAC------------------------------------------TCGTTTTCACT--------------------------------------------------------------------AATGCAAAGTTTCCCCATTGTCTTTGGATCAGCTCAAGACTGCCTGGGATCACCTGGATGACTTCGTGAATCTGCCGCCGGA
dm3 chr3R:18347463-18347805 - CCGAGAAGGGCATGGCCCTGCTGGTCAACCATGGCATCTCCGATGAGAAGGTAAGACAACTAGTAATA--TATAAACATTAGATTAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA-----AAGAA-A-TT-------GGTTT-TA---TTCAATATTGATTAAATACCAAAAT------------------------------------AATT-------------------TATTGCCCAAGCA---------------------------------------------------------GC---------AAATCTAA---AATCTCA-------------------------------TTCATATCA-----------GTTGAAATTAA----TAGCTTCTATTCCTGGGGGAACCGTATCTGTAGA--GATAAAACAAAAATTTAGTTTCAAGGTTATTGTAC------------------------------------------TCCTTTTCACT--------------------------------------------------------------------AATACAAAGTTTCTCCATTGCCTTTGGATCAGCTCAAGACTGCCTGGGATCACCTGGATGACTTCGTGAATCTGCCGCCGGA
droEre2 scaffold_4820:9729104-9729453 + CCGAGAAGGGCATGGCCCTGCTGGTCAACCATGGCATCTCCGATGAGAAGGTAAGACAACTAGCCATAAATATACACTTTAGATTAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGAACCAAGGA-ACTG-------GGTTT---------TCCACTGATTAAATACAAATAT------------------------------------ACGT-------------------CATTGCTAAACCT---------------------------------------------------------GC---------AAATCTAA---AATCGAAGT-TGAAAA--------TTTATT--GCGGTATTCATATCAGTCCGATAGCAGTTGAAATTGA----TAGTTTCTATTCCCTGG--------------------------CAAAAACATAGTTTTAAGGTTATTGTAC------------------------------------------TCGTCT---CT--------------------------------------------------------------------AATATAACATTTCCTTATGGCCTTTTAAACAGCTCAAGACTGCCTGGGATCACCTGGATGACTTCGTGGACCTGCCGCCCGA
droYak3 3R:19193849-19194193 - dya_1084 CCGAGAAGGGCATGGCTCTGCTGGTCAACCATGGCATCTCCGATGAGAAGGTAAGACAACTTATCATATTTATGCACTTCAGATTAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGCAACAAAAA-A-CG-------GGATT-TA---TTTTCTATTGATTAAATGGAAACAT------------------------------------ACGT-------------------CATTGCTGAACCA---------------------------------------------------------GC---------AAATCTAA---AATCTCAGCATGAAAA--------TTTATT--GCGCTATTCATATCAGTGCGATAATAGTTGAAATTAA----TAGCTTCAATTCCCGGGGGAAGCGTATTCGTAGA--GATTAAACAAAC---------------------------------------------------------------------------T--------------------------------------------------------------------A----AACTTTTCACTATTGCTCTTTGAACAGCTCAAGACTGCCTGGGATCACCTGGATGACTTCGTGGACCTGCCGCCCGA
droEug1 scf7180000409768:474937-475434 - CCGAGAAGGGCATGGCCCTGCTGGTCAACCATGGCATATCAGATGAGAAGGTAAGTTA----------------------AGATTTGTAAGTTATTTGCTTTTTAACATCATAAATGAAATAAAATTTGAAAATCAAATTCCT-------------------------------------------------------------------------------------------------------CCAAAT--------------TTATTCA--------------------------ACAAGGATAATGTTTTTTTCGTTTTTA---TTCTCCAT--------------TTTAC--GT---------------CA------------AACGT-------------------TA--------TCAGTA-----------------ATCT---------------------------------TC---------AAATCTTA---AATCTCAGTATATATATATATAAATTTATTATATACTTTTCATATCAGCTTGATAGAAGTTGAACTTAATAAATAGTTTCAGTTCCAAGGT--CCCATATCACTTGA--GATTAAAAAGAAATGGAATTTCAAGGTTAACGCTT------------------------------------------TCTTATATACT-AGAACCTGACAATAAAAACTATAAAGTTACATAAGTTTAGTTTATAAAAAAAGAAATTATAAGAATTA----ATA--TTCTCCCTT-CTCTTGGAACAGCTTAAGACTGCCTGGGATCACCTGGATGACTTTGTGGACCTCCCACCGGA
droBia1 scf7180000302402:5378114-5378256 + GTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTAA---AATCTCAGTAAGGAAA--------TATAT---ATGCTTTTCATATCAGCATGATAGGAGTTGAAATTAA----TAGCTCCTATTCCAGGGGGAACCCTATCTCTAGAGAGATTAAACAGTAAAACAGTTTCAAGGTTAATGTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGT
droTak1 scf7180000415711:673379-673698 + TATA------------------------------------------------------------------------CT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTATTGAGTAAAAAAAATCA-----------------------------------TTACGT-------------------CATAACTGAACCAGCT-----------------ATCT---------------------------------GC---------AAATCTCA---AATCTCAGTATGAAAA--------TTTAT---ATACTTTTCATATCGGCTTGATAGGAGTGGAAATTAA----TAGCTTCTATTCCAGTGGGAGCCGTATCTCTTGA--GATTAAAGAATACTAGCATTTCAAGGTTATTGTAG------------------------------------------TCGTATTT-CTAAGAA-TTGGGAAAAA-------------------------------AAATAGGGAGCGATATGAAGTAATCTATAA-TTCCCCCTTCCCTTCCGAACAGCTCAAGACTGCCTGGGATCACCTGGACGACTTTGTGGACCTGCCGCCCGA
droEle1 scf7180000491280:4423007-4423063 + CCGAGAAGGGCATGGCCCTGCTGGTCAACCATGGCATATCAGACGAGAAGGTAAGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779233:48577-48673 - CCGAGAAGGGCATGGCCCTGCTGGTCAACCATGGCATATCAGACGAGAAGGTAAGATCACAAAGAAAG--TTTAAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCAAAAATAGTA-----AATAA-A-T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454106:1495384-1495780 - CCGAGAAGGGAATGGCGCTGCTGGTCAACCACGGAATATCAGATGAGAAGGTAAGCAAATTAA-------------------------------------------------------------------------------------------------GGGGTTTTTTGAAATT------------------------------------------------------------------AATACCAATATTAAAGAGGCGAAAATACCCCCACGT-------------------------------------------------------------------------------------------------TATTTGAAATCCATAACGT-------------------AATAAATAAACCA---------------------------------------------------------GC---------AATCATAAAGAAATCTCAGTAT-----------------------------ACTATCAAACTGATAGGAGTAGAAACTAA----TAGTTTATATTCCCGGGGGAGCCATATCTCCAGA--GATTAGTAAACAGTGGAATGTCAAGGCTAATTTATTGAATATTGGGAATATGAAAGCGTGTGCTGATTTTTCGATAGTCA----CACT--------------------------------------------------------------------AATCAAAAGTTTTT---TTACCTCTGAAACAGCTCAAGACTGCCTGGGATCACCTGGATGACTTCGTGGACCTCCCGCCAGA
droKik1 scf7180000302706:1576925-1577307 - CCGAGAAGGGCATGGCCCTGCTGGTCAACCATGGCATTTCAGACGAGAAGGTAAGCTTGAAA----------------------------------------------------------------------------TTCCTTGTTAAGAACAAGTTAAGAGGCATTT--AAATTAAATGGGAATAAATTATATATAAAGTAGGATTTGTATATGTATATCCAATAAATAGAAAATAAATATATACCAAAT--------------TTATTTTGGTGGAACTTTTCTG----------------------------------------------CAT--------------ATTTCTGGTT-TAATCCCG-ATAGTTCTCAATATTCATT-AGTTAAAATTTATGGGATTAGCATAAAA------------------------------------------------------------------------------------------------------------------------------------AGTTCTTCAAAAATATTATTTAA----AGACATCTAACTCATGGCCTACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCTCTGCT-TTTGTGAAACAGCTCAAGACTGCGTGGGATCATTTGGATGACTTCGTGGACCTCGCGCCTGA
droAna3 scaffold_13340:21760010-21760298 - CCGAGAAGGGCATGGCTCTGCTGGTCAATCACGGCATATCCGATGAGAAGGTAAGCCATCCATT----------------------------------------------------------------------------CTTTGA--------------------------A---------------------------------------TA----------------------------------------------------------------------TTTATATTTAAA-----TATTA-A-T----------------ACT-----CAC--------------AGTTACGGGTAAG------AAATATTTTCGATTGCGATT-CGC-------------------AAGAGATAACCTATCATTTAGTGCTTTATTTCAACCATAAATAATGGATTTAAGAGTCCATAAGATTTCAGTATTTTTAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTTCCTCTATTTGTTTT---GCAGCTCAAGACTGCCTGGGATCACCTGGATGACTTTGTGGACCTGCCGCCGGA
droBip1 scf7180000396583:444214-444494 + CCGAGAAGGGCATGGCGCTGCTGGTCAACCACGGCATATCCGATGAGAAGGTAAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACTCCCATGGAACTGTTCTAAATTTAAA-----TATCA-A-T----------------ACT-----CAC--------------AGTTACGGGTAAGATTGCGAACAATTTTTGATAGCCATT-CGC-------------------AACAGATAACCTATCATTTACTGCTTTATTTCAATCATAAATTATGGACTTAAGA-----------------TTTTTTAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTTCCTCTGTTTGCTTT---GCAGCTCAAGACTGCCTGGGATCACCTGGATGACTTTGTGGACCTGCCGCCGGA
dp5 2:3328463-3328517 + CCGAGAAGGGTATGGCTCTGCTGGTCAACCATGGCATATCCGACGAGAAGGTAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_7:1013000-1013054 - CCGAGAAGGGTATGGCTCTGCTGGTCAACCATGGAATATCCGACGAGAAGGTAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004943:15279854-15279948 + AAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGTTATATGTATATTGTTT------------------------------------------TC--------T-------------------------------------------------------------------------AACACT-------TGCCAA--TTATAGCTTAAGACTGCCTGGGATCATTTGGATGATTTTGTTGATCTGCCACCGAA
droVir3 scaffold_13047:18650937-18651002 + CAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-GTTTCGATTTAGCTGAAAACCGCCTGGGACCATTTGGATGACTTTGTGGATCTGGCGACGGA
droMoj3 scaffold_6540:19772349-19772468 - GACGAAAAGG--TGGCTACAATTCTCAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTTCAG------------------------------------------TCATGC---TT--------------------------------------------------------------------AATCTGA-----CTCTGTCTGACTCTCTTTAGCTGAAAACGGCTTGGGACCATTTGGACGACTTTGTCGACCTGGAAGCGGA
droGri2 scaffold_14830:3781174-3781226 + CCGAAAAGGGCATGGCGATGCTGGTTAATCATGGCATATCTGATGAGAAGGTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CCGAGAAGGGCATGGCCCTGCTGGTCAACCATGGCATCTCCGATGAGAAGGTAAGACAACTAGTAATA--TATACACTTAAGATTAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA-----AAGAA-A-TG-------GGTTTTTA---TTCACTATTGATTAAATACCAAAAT------------------------------------ACGT-------------------CATTGCCAAAGCA---------------------------------------------------------GC---------AAATCTAA---AACCGCA-------------------------------TTCGTATCAGCCTGATAATAGTTGAAATTAA----TAGCTTCTATTCCCGGGGGAAACGTATCTGTAGA--GATAGGACAAAAATTTAGTTTCAAGGTTATTTTAC------------------------------------------TCGTTTTCACT--------------------------------------------------------------------AATGCAAAGTTTCCCCATTGTCTTTGGATCAGCTCAAGACTGCCTGGGATCACCTGGATGACTTCGTGAACCTGCCGCCGGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCCATTGTCTTTGGATCAG..................................................2212.00200200000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACTTCGTGAACCTGCC......2011.00100100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGTTTCAAGGTTATTTTAC------------------------------------------T................................................................................................................................................................2311.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GCA---------------------------------------------------------GC---------AAATCTAA---AACCGCA-------------------------------.....................................................................................................................................................................................................................................................................................................................2011.00100000100000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGGATGACTTCGTGAACCTGC.......2511.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACTTCGTGAACCTGCCGCC...2311.00100000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGACTTCGTGAACCTGCC......2111.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGGATGACTTCGTGAACCTGCC......2511.00101000000000000000
...AGAAGGGCATGGCCCTGCTGGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGGATGACTTCGTGAAC...........2111.00100100000000000000
.......................GTCAACCATGGCATCTCCGATGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGACTTCGTGAGA...........16180.06100000000010000000
droSec2
CCGAGAAGGGCATGGCCCTGCTGGTCAACCATGGCATCTCCGATGAGAAGGTAAGACAACTAGTAATA--TATACACTTAAGATTAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA-----AAGAG-A-TG-------GGTTT-TA---TTCACTATTGATTAAATGCCAAAAT------------------------------------ACGT-------------------CATTGCCAAAGCA---------------------------------------------------------GC---------AAATCTAA---AACCGCA-------------------------------TTCATATCAGCCTGATAATAGTTGAAATTAA----TAGCTTCTATTCCCGGGGGAAACGTATCTGTAGA--GATAAGACAAAAATTTAGTTTCAAGGTTATTTTAC------------------------------------------TCGTTTTCACT--------------------------------------------------------------------AATGCAAAGTTTCCCCATTGTCTTTGGATCAGCTCAAGACTGCCTGGGATCACCTGGATGACTTCGTGAATCTGCCGCCGGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAGACTGCCTGGGATCA..............................2111.0011000
dm3
CCGAGAAGGGCATGGCCCTGCTGGTCAACCATGGCATCTCCGATGAGAAGGTAAGACAACTAGTAATA--TATAAACATTAGATTAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA-----AAGAA-A-TT-------GGTTT-TA---TTCAATATTGATTAAATACCAAAAT------------------------------------AATT-------------------TATTGCCCAAGCA---------------------------------------------------------GC---------AAATCTAA---AATCTCA-------------------------------TTCATATCA-----------GTTGAAATTAA----TAGCTTCTATTCCTGGGGGAACCGTATCTGTAGA--GATAAAACAAAAATTTAGTTTCAAGGTTATTGTAC------------------------------------------TCCTTTTCACT--------------------------------------------------------------------AATACAAAGTTTCTCCATTGCCTTTGGATCAGCTCAAGACTGCCTGGGATCACCTGGATGACTTCGTGAATCTGCCGCCGGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAGACTGCCTGGGATCACC............................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCACCTGGATGACTTCGTG..............2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000002000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTCGTGAATCTGCCGCC...2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
.......................GTCAACCATGGCATCTCCGATGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCTGGATGACTTCGTGAATCTGC.......2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCATTGCCTTTGGATCAG..................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCACCTGGATGACTTC.................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGCCTGGGATCACCTGGA........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................TATTGATTAAATACCAAAAT------------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGATCACCTGGATGACTTCGTG..............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------------------------TCCTTTTCACT--------------------------------------------------------------------AATACAAAGTTTC.....................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGGATGACTTCGTGAATC..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGACTGCCTGGGATCACCTATC........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................AACCATGGCATCTCCGATGAGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGCCTGGGATCACCTGGAT.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGACTTCGTGAATCTGCCGCC...2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTCAAGACTGCCTGGGAT................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TCAACCATGGCATCTCCGATGAGAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATTGCCTTTGGATCAG..................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGGATGACTTCGTG..............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGGGGGAACCGTATCTGTAGA--GA............................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTTCGTGAATCTGCCGCCGGA2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGGATGACTTCGTGAAT...........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGCCTGGGATCACCTGGATGACTT..................2711.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGACTGCCTGGGATCACCTGGATGACT...................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTTCGTGAATCTGCCGCCGT.2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCCTGGGATCACCTGGATGA.....................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................TGGCATCTCCGATGAGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAGACTGCCTGGGATCACCT...........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACTTCGTGAATCTGCCG.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCA-------------------------------TTCATATCA-----------GTTGAAATTAA----TA................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTGGGATCACCTGGATGACTTCGTG..............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGATGACTTCGTGAATCTGCCGCCG..2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................TTAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA-----AAGAA-A-TT-------GGTTT-T...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTTTCTCCATTGCCTTTGGATCAG..................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGGATGACTTCGTGAATCTGCC......2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GCATGGCCCTGCTGGTCAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTCTCCATTGCCTTTGGATCAG..................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGACTGCCTGGGATCACCTGGA........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGACTTCGTGAATCTGCCGCCATC2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCACCTGGATGACTTCGTGA.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGATCAGCTCAAGACTGCCTGGGA.................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCCTTTGGATCAGCTCAAG............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CAACCATGGCATCTCCGATGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................CAACCATGGCATCTCCGAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGACTGCCTGGGATCACCTGGATGAC....................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CCGAGAAGGGCATGGCCCTGCTGGTCAACCATGGCATCTCCGATGAGAAGGTAAGACAACTAGCCATAAATATACACTTTAGATTAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGAACCAAGGA-ACTG-------GGTTT---------TCCACTGATTAAATACAAATAT------------------------------------ACGT-------------------CATTGCTAAACCT---------------------------------------------------------GC---------AAATCTAA---AATCGAAGT-TGAAAA--------TTTATT--GCGGTATTCATATCAGTCCGATAGCAGTTGAAATTGA----TAGTTTCTATTCCCTGG--------------------------CAAAAACATAGTTTTAAGGTTATTGTAC------------------------------------------TCGTCT---CT--------------------------------------------------------------------AATATAACATTTCCTTATGGCCTTTTAAACAGCTCAAGACTGCCTGGGATCACCTGGATGACTTCGTGGACCTGCCGCCCGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....AAGGGCATGGCCCTGCTGGTCAACCATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGTGGACCTGCCGCCCGA2111.0010100000
..........................................................................................................................................................................................................................................................................................................ACCAAGGA-ACTG-------GGTTT---------TCCACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTCCGATAGCAGTTGAAA..........................................................................................................................................................................................................................................................................................2011.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACCTGGATGACTTCGTGGACCTGC.......2711.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGTTGAAATTGA----TAGT..............................................................................................................................................................................................................................................................................1911.0010001000
droYak3
CCGAGAAGGGCATGGCTCTGCTGGTCAACCATGGCATCTCCGATGAGAAGGTAAGACAACTTATCATATTTATGCACTTCAGATTAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGCAACAAAAA-A-CG-------GGATT-TA---TTTTCTATTGATTAAATGGAAACAT------------------------------------ACGT-------------------CATTGCTGAACCA---------------------------------------------------------GC---------AAATCTAA---AATCTCAGCATGAAAA--------TTTATT--GCGCTATTCATATCAGTGCGATAATAGTTGAAATTAA----TAGCTTCAATTCCCGGGGGAAGCGTATTCGTAGA--GATTAAACAAAC---------------------------------------------------------------------------T--------------------------------------------------------------------A----AACTTTTCACTATTGCTCTTTGAACAGCTCAAGACTGCCTGGGATCACCTGGATGACTTCGTGGACCTGCCGCCCGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAAGACTGCCTGGGATCAC.............................2112.00220000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCACCTGGATGACTTCGTGGACCTGCC......2912.00200000020000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGGATGACTTCGTGGACCT.........2311.00110000000000
..............................................................................................................................................................................................................................................................................................................................................TATTGATTAAATGGAAACAT------------------------------------ACGT-------------------C......................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACTATTGCTCTTTGAACA...................................................2111.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCGTGGACCTGCCGCCCGA2111.00100100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGCCTGGGATCACCTGGATGA.....................2411.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCACCTGGATGACTTCGTG..............2111.00100000010000
...........ATGGCTCTGCTGGTCAACCATGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
....GAAGGGCATGGCTCTGCTGGTCAACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
.......................GTCAACCATGGCATCTCCGATGAGAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGATCACCTGGATGACT...................2011.00100000100000
droEug1
CCGAGAAGGGCATGGCCCTGCTGGTCAACCATGGCATATCAGATGAGAAGGTAAGTTA----------------------AGATTTGTAAGTTATTTGCTTTTTAACATCATAAATGAAATAAAATTTGAAAATCAAATTCCT-------------------------------------------------------------------------------------------------------CCAAAT--------------TTATTCA--------------------------ACAAGGATAATGTTTTTTTCGTTTTTA---TTCTCCAT--------------TTTAC--GT---------------CA------------AACGT-------------------TA--------TCAGTA-----------------ATCT---------------------------------TC---------AAATCTTA---AATCTCAGTATATATATATATAAATTTATTATATACTTTTCATATCAGCTTGATAGAAGTTGAACTTAATAAATAGTTTCAGTTCCAAGGT--CCCATATCACTTGA--GATTAAAAAGAAATGGAATTTCAAGGTTAACGCTT------------------------------------------TCTTATATACT-AGAACCTGACAATAAAAACTATAAAGTTACATAAGTTTAGTTTATAAAAAAAGAAATTATAAGAATTA----ATA--TTCTCCCTT-CTCTTGGAACAGCTTAAGACTGCCTGGGATCACCTGGATGACTTTGTGGACCTCCCACCGGASizeHit CountTotal NormTotal
No Reads
droBia1
GTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTAA---AATCTCAGTAAGGAAA--------TATAT---ATGCTTTTCATATCAGCATGATAGGAGTTGAAATTAA----TAGCTCCTATTCCAGGGGGAACCCTATCTCTAGAGAGATTAAACAGTAAAACAGTTTCAAGGTTAATGTAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGTSizeHit CountTotal NormTotal
No Reads
droTak1
TATA------------------------------------------------------------------------CT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTATTGAGTAAAAAAAATCA-----------------------------------TTACGT-------------------CATAACTGAACCAGCT-----------------ATCT---------------------------------GC---------AAATCTCA---AATCTCAGTATGAAAA--------TTTAT---ATACTTTTCATATCGGCTTGATAGGAGTGGAAATTAA----TAGCTTCTATTCCAGTGGGAGCCGTATCTCTTGA--GATTAAAGAATACTAGCATTTCAAGGTTATTGTAG------------------------------------------TCGTATTT-CTAAGAA-TTGGGAAAAA-------------------------------AAATAGGGAGCGATATGAAGTAATCTATAA-TTCCCCCTTCCCTTCCGAACAGCTCAAGACTGCCTGGGATCACCTGGACGACTTTGTGGACCTGCCGCCCGASizeHit CountTotal NormTotal
No Reads
droEle1
CCGAGAAGGGCATGGCCCTGCTGGTCAACCATGGCATATCAGACGAGAAGGTAAGGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CCGAGAAGGGCATGGCCCTGCTGGTCAACCATGGCATATCAGACGAGAAGGTAAGATCACAAAGAAAG--TTTAAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCAAAAATAGTA-----AATAA-A-T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
CCGAGAAGGGAATGGCGCTGCTGGTCAACCACGGAATATCAGATGAGAAGGTAAGCAAATTAA-------------------------------------------------------------------------------------------------GGGGTTTTTTGAAATT------------------------------------------------------------------AATACCAATATTAAAGAGGCGAAAATACCCCCACGT-------------------------------------------------------------------------------------------------TATTTGAAATCCATAACGT-------------------AATAAATAAACCA---------------------------------------------------------GC---------AATCATAAAGAAATCTCAGTAT-----------------------------ACTATCAAACTGATAGGAGTAGAAACTAA----TAGTTTATATTCCCGGGGGAGCCATATCTCCAGA--GATTAGTAAACAGTGGAATGTCAAGGCTAATTTATTGAATATTGGGAATATGAAAGCGTGTGCTGATTTTTCGATAGTCA----CACT--------------------------------------------------------------------AATCAAAAGTTTTT---TTACCTCTGAAACAGCTCAAGACTGCCTGGGATCACCTGGATGACTTCGTGGACCTCCCGCCAGASizeHit CountTotal NormTotal
No Reads
droKik1
CCGAGAAGGGCATGGCCCTGCTGGTCAACCATGGCATTTCAGACGAGAAGGTAAGCTTGAAA----------------------------------------------------------------------------TTCCTTGTTAAGAACAAGTTAAGAGGCATTT--AAATTAAATGGGAATAAATTATATATAAAGTAGGATTTGTATATGTATATCCAATAAATAGAAAATAAATATATACCAAAT--------------TTATTTTGGTGGAACTTTTCTG----------------------------------------------CAT--------------ATTTCTGGTT-TAATCCCG-ATAGTTCTCAATATTCATT-AGTTAAAATTTATGGGATTAGCATAAAA------------------------------------------------------------------------------------------------------------------------------------AGTTCTTCAAAAATATTATTTAA----AGACATCTAACTCATGGCCTACTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCTCTGCT-TTTGTGAAACAGCTCAAGACTGCGTGGGATCATTTGGATGACTTCGTGGACCTCGCGCCTGASizeHit CountTotal NormTotal
No Reads
droAna3
CCGAGAAGGGCATGGCTCTGCTGGTCAATCACGGCATATCCGATGAGAAGGTAAGCCATCCATT----------------------------------------------------------------------------CTTTGA--------------------------A---------------------------------------TA----------------------------------------------------------------------TTTATATTTAAA-----TATTA-A-T----------------ACT-----CAC--------------AGTTACGGGTAAG------AAATATTTTCGATTGCGATT-CGC-------------------AAGAGATAACCTATCATTTAGTGCTTTATTTCAACCATAAATAATGGATTTAAGAGTCCATAAGATTTCAGTATTTTTAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTTCCTCTATTTGTTTT---GCAGCTCAAGACTGCCTGGGATCACCTGGATGACTTTGTGGACCTGCCGCCGGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................AAGAGATAACCTATCATTTAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.....AAGGGCATGGCTCTGCTGGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGACTGCCTGGGATCACC............................1811.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................CGATT-CGC-------------------AAGAGATAACCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
..........CATGGCTCTGCTGGTCAATCAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..........CATGGCTCTGCTGGTCAATCACGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGACTTTGTGGACCTGCCGCCG..2511.001000001
droBip1
CCGAGAAGGGCATGGCGCTGCTGGTCAACCACGGCATATCCGATGAGAAGGTAAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACTCCCATGGAACTGTTCTAAATTTAAA-----TATCA-A-T----------------ACT-----CAC--------------AGTTACGGGTAAGATTGCGAACAATTTTTGATAGCCATT-CGC-------------------AACAGATAACCTATCATTTACTGCTTTATTTCAATCATAAATTATGGACTTAAGA-----------------TTTTTTAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTTCCTCTGTTTGCTTT---GCAGCTCAAGACTGCCTGGGATCACCTGGATGACTTTGTGGACCTGCCGCCGGASizeHit CountTotal NormTotal
No Reads
dp5
CCGAGAAGGGTATGGCTCTGCTGGTCAACCATGGCATATCCGACGAGAAGGTAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............GGCTCTGCTGGTCAACCATGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000000
................TCTGCTGGTCAACCATGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010000000
droPer2
CCGAGAAGGGTATGGCTCTGCTGGTCAACCATGGAATATCCGACGAGAAGGTAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............GCTCTGCTGGTCAACCATGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
droWil2
AAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGTTATATGTATATTGTTT------------------------------------------TC--------T-------------------------------------------------------------------------AACACT-------TGCCAA--TTATAGCTTAAGACTGCCTGGGATCATTTGGATGATTTTGTTGATCTGCCACCGAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTAAGACTGCCTGGGAT................................1912.00200110
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGGATGATTTTGTTG.............1811.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTTAAGACTGCCTGGGATC...............................2111.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTGGATGATTTTGTTGATCTGC.......2511.00101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGATGATTTTGTTGAT...........1911.00100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTGGATGATTTTGTTGATC..........2211.00100100
droVir3
CAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-GTTTCGATTTAGCTGAAAACCGCCTGGGACCATTTGGATGACTTTGTGGATCTGGCGACGGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTGGGACCATTTGGATGACT...................2312.002001000000000000000100000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCTGAAAACCGCCTGGGACCAT.............................2411.001000000000000000000000000000000000000000100000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCTGAAAACCGCCTGGGACCATT............................2511.001000000000000000000000000010000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACCGCCTGGGACCATTTGGATGACT...................2811.001100000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTGGGACCATTTGGAT.......................1911.001000000000000001000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGTGGATCTGGCGACGGA2111.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCGCCTGGGACCATTTGGAT.......................2211.001000000000000000000000000000000000000000000000000000000000000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCTGAAAACCGCCTGGGACCATTT...........................2611.001000000000000000000000000100000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGATCTGGCGACGG.1911.001000001000000000000000000000000000000000000000000000000000000000
droMoj3
GACGAAAAGG--TGGCTACAATTCTCAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCTTCAG------------------------------------------TCATGC---TT--------------------------------------------------------------------AATCTGA-----CTCTGTCTGACTCTCTTTAGCTGAAAACGGCTTGGGACCATTTGGACGACTTTGTCGACCTGGAAGCGGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAACGGCTTGGGACCATTTGGACGA.....................2711.001100000
droGri2
CCGAAAAGGGCATGGCGATGCTGGTTAATCATGGCATATCTGATGAGAAGGTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................TCATGGCATATCTGATGAGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
...........................ATCATGGCATATCTGATGAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101

Generated: 05/18/2015 at 04:12 PM