ID:

dsi_667

 Coordinate:

2r:14107701-14107826 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.1 -8.0 -7.9

Flybase annnotation

exon [2r_14107827_14107930_-]; CDS [2r_14107827_14107879_-]; CDS [2r_14107580_14107700_-]; exon [2r_14107509_14107700_-]; intron [2r_14107701_14107826_-]

No Repeatable elements found

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------##################################################
GCTTTCCGCATACCTTTTGGCAAGAAGCACGCTGAAATCGCGAGTTCCTTGTAAGTATATGATGTCTTGCTTGATTCTGCATCATGAATTCATTGGTGTTCCCACTCTCTTAATGCTACCAAAGCACACATTGCATAACCATCCAGAGAACTCAACTTGTTTCTTTTACTTCGTAGCATCCGATCTGGAGCCGGATTCGGAGGAGCTGCTGGCCTGGCCGTGCTTT
************************************************************************************(((.(((.((((((...............((((.....)))).............)).)))).))).))).........*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M024
male body		 SRR902008
ovaries
 M023
head
 M053
female body
 SRR902009
testis
 M025
embryo
 SRR553487
NRT_0-2 hours eggs
 O001
Testis
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 O002
Head
 GSM343915
embryo
.................TGGCAAGAAGCACGCTGAAATCGCGAGT..................................................................................................................................................................................... 28 0 1 33.00 33 15 12 0 0 0 0 0 0 3 0 3 0 0 0
................TTGGCAAGAAGCACGCTGAAATCGCGAGT..................................................................................................................................................................................... 29 0 1 8.00 8 4 4 0 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TCTGGAGCCGGATTCGGAGGAGCTGC................. 26 0 1 8.00 8 1 0 0 7 0 0 0 0 0 0 0 0 0 0
.................TGGCAAGAAGCACGCTGAAATCGCGA....................................................................................................................................................................................... 26 0 1 3.00 3 1 2 0 0 0 0 0 0 0 0 0 0 0 0
..........TACCTTTTGGCAAGAAGCACGCTGAA.............................................................................................................................................................................................. 26 0 1 3.00 3 2 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................................AGCCGGATTCGGAGGAGCTGCTGGC............. 25 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................AGCCGGATTCGGAGGAGC.................... 18 0 1 2.00 2 0 0 1 0 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................................CCGATCTGGAGCCGGATTCGGAGGA...................... 25 0 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0
...................GCAAGAAGCACGCTGAAATCGCGAGT..................................................................................................................................................................................... 26 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............TTTGGCAAGAAGCACGCTGAAATCGCGA....................................................................................................................................................................................... 28 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0 0 0
.................TGGCAAGAAGCACGCTGAAAT............................................................................................................................................................................................ 21 0 1 2.00 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0
...............................................................................................................................................................................................CGGATTCGGAGGAGCTGCTGGCC............ 23 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................CAGAGAACTCAACTTGTTTC............................................................... 20 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
...........................................GTTCCTTGTAAGTATATGA.................................................................................................................................................................... 19 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................TCTGGAGCCGGATTCGGAGGAGCTG.................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........................................................TGATGTCTTGCTTTATTCTGTA................................................................................................................................................. 22 2 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...............................................................................................................................................................................TCATCCGATCTGGAGCCGG................................ 19 1 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................GGAGGAGCTGCTGGCCTGGCCGTG.... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
....................................................................................TGAATTCATTGGTGTTCCCAC......................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...........................................................TGATGTCTTGCTTGATTCTGTA................................................................................................................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................GGAGGAGCTGCTGGCCTGGCC....... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................GCCGGATTCGGAGGAGCTGC................. 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................CATCCGATCTGGAGCCGGATTC............................ 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................ATTCGGAGGAGCTGCTGGCCTGGCTG...... 26 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.............CTTTTGGCAAGAAGCACGCT................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1
.............................................................................................................................................................................................GCCGGATTCGGAGGAGCT................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................GATCTGGAGCCGGATTCGGAG........................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............TTTTGGCAAGAAGCACGCTGAAA............................................................................................................................................................................................. 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................GCTGCTGGCCTGGCCGTGCT.. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................TTCATCCGATCTGGAGCCGGATTCGG.......................... 26 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
....TCCGCATACCTTTTGGCAAGAAGCA..................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
...................................................................................................................................................................................................TTCGGAGGAGCTGCTGGCCTGGCCGTGC... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.....CCGCATACCTTTTGGCAAGAA........................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................TCGGAGGAGCTGCTGGCCT........... 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................GATTCGGAGGAGCTGCTGGCCTGGCC....... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................GGCAAGAAGCACGCTGAAATCGCGAGT..................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................CACGCTGAAATCGCGAGTTCC.................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
..............TTTTGGCAAGAAGCACGC.................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
....TCCGCATACCTTTTGGCAAGA......................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.....................AAGAAGCACGCTGAAATCGCGAGT..................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................CATCCGATCTGGAGCCGGATTCGGA......................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................ATTCGGAGGAGCTGCTGGCCTGGCCG...... 26 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
.................TGGCAAGAAGCACGCTGAAATCGC......................................................................................................................................................................................... 24 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
................................................................................................................................................................................................GGATTCGGAGGAGCTGCT................ 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.CTTTCTGCATACCTTTTGGCA............................................................................................................................................................................................................ 21 1 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0
.........................................................................................................................................................................TTCGTAGCATCCGATCTGGAG.................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................ATCTGGAGCCGGATTCGG.......................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................CTGGAGCCGGATTCGGAGGAGCTGC................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
................TTGGCAAGAAGCACGCTGAA.............................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................CGATCTGGAGCCGGATTCGGA......................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GGAGCTGCTGGCCTGGCCGTGC... 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................TTCGGAGGAGCTGCTGGCCTGGCC....... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................CGAGTTCCTTGTAAGTATAT...................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................GTTCCCACTCTCTTAATGCT............................................................................................................. 20 0 1 1.00 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0
...................................................................................................................................................................................................TTCGGAGGAGCTGCTGGCCTGGCCG...... 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................................GGATTCGGAGGAGCTGCTGGCCTGGCC....... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...............TTTGGCAAGAAGCACGCTGAA.............................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................AGAAGCACGCTGAAATCGCG........................................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.................TGGCAAGAAGCACGCTGAAATCGCGAA...................................................................................................................................................................................... 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................TGGAGCCGGATTCGGAGGAGCTGC................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................AAGCACGCTGAAATCGCGAGT..................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...................GCAAGAAGCACGCTGAAATC........................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
.................TGGCAAGAAGCACGCTGAAAACGCGAGT..................................................................................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...........ACCTTTTGGCAAGAAGCAC.................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
...............TTTGGCAAGAAGCACGCTGAAATCGCGAGT..................................................................................................................................................................................... 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................ATGATGTCGTGCTTGATTCTG................................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................AGAAGCACGCTGAAATCGCGAGT..................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GAGGAGCTGCTGGCCTGGCCG...... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TTCGGAGGAGCTGCTGGCCTGGCCGTA.... 27 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................AGCCCGAATCGGAGGAGCTGA................. 21 3 7 0.14 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0

Anti-sense strand reads

CGAAAGGCGTATGGAAAACCGTTCTTCGTGCGACTTTAGCGCTCAAGGAACATTCATATACTACAGAACGAACTAAGACGTAGTACTTAAGTAACCACAAGGGTGAGAGAATTACGATGGTTTCGTGTGTAACGTATTGGTAGGTCTCTTGAGTTGAACAAAGAAAATGAAGCATCGTAGGCTAGACCTCGGCCTAAGCCTCCTCGACGACCGGACCGGCACGAAA
***************************************************************(((.(((.((((((...............((((.....)))).............)).)))).))).))).........************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M023
head
 M053
female body
 O002
Head
 SRR553486
Makindu_3 day-old ovaries
 SRR902008
ovaries
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
...............................................................CAGAACGAACTAAGACGTAGT.............................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................................................CAAGGGTGAGAGAATTACGAT............................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...........TGGAAAACCGTTCTTCGTGC................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................GCTAGACCTCGGCCTAAGCCT......................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
..............................................................................................................................GTGTAACGTATTGGTAGGTCTCT............................................................................. 23 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................TTAAGCATCGTAGGCTAGACC...................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
...AAGGCGTATGGAAAACCGTTC.......................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TCGGCCTAAGCCTCCTCGACG................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....GGCGTATGGAAAACCGTTCTT........................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...............AAACCGTTCTTCGTGCGAC................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......CGTATGGAAAACCGTTCTTC....................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
.............................GCGACTTTAGCGCTCAAGGAA................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................CGGCCTAAGCCTCCTCGGCGG................ 21 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................GAAGGCTAGACCTCGGCC................................ 18 1 8 0.13 1 0 0 0 0 0 0 0 0 0 1 0
...................................................................................................AGGGTTAGAGAATTA................................................................................................................ 15 1 18 0.11 2 0 0 2 0 0 0 0 0 0 0 0
...................................................................................................AGGGTGAGAGAAGGACGA............................................................................................................. 18 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:14107651-14107876 - dsi_667 GCTTTCCGCATACCTTTTGGCAAGAAGCACGCTGAAATCGCGAGTTCCTTGTAAGTA---------------TATG--ATGTCTTGCTT--GATTCTGCATCATGAAT-----------TCATTGGTGTTCCCACTC-------TCTTAATGC--------------------T--------------------ACCAA--AGCACACATTGCATAACC--ATC-CAGAG----A----AC-T-------------CA----A---CTT-GT----T----TCTTTTACT-TCGTAGCATCCGATCTGGAGCCGGATTCGGAGGAGCTGCTGGCCTGGCCGTGCTTT
droSec2 scaffold_1:10959494-10959719 - GCTTTCCGCATACCTTTTGGCAAGAAGCACGCTGAAATTGCGAGTTCCTTGTAAGTA---------------TATG--ATGTCGTGCTT--GATTCTGCATCATGAAT-----------TCATTAGTGTTCCCACTC-------TCTTAACGC--------------------T--------------------ACCAA--AGCACACATTGCATAACC--ATC-CTGAG----A----AC-T-------------CA----A---CTT-GT----T----TCTTTTAAT-TCGTAGCATCCGATCTGGAGCCGGATTCGGAGGAGCTGCTGGCCTGGCCGTGCTTT
dm3 chr2R:13459979-13460206 - GCTTTCCGCATACCTTTTGGCAAGAAGCACGCTGAGATAGCGAGTTCCTTGTAAGTA---------------TATG--CTGTCGTGCTT--GATTCTGCATCATGAAT-----------TCATTAGTGTTCCCGCTC-------TTTTACTGC--------------------T--------------------ACCAA--AGCACACATTGCATAACCCCATC-CAGAG----A----AC-T-------------AA----A---CTA-GT----T----TCTTTTAAT-TCGTAGCATCCGATCTGGAGCCGGATTCGGAGGAGCTGCTGGCCTGGCCGTGCTTT
droEre2 scaffold_4845:7688081-7688306 - GCTTTCCGCATACCTTTTGGCAAGAAGCACGCTGAGATCGCAAGTTCCTTGTGAGTA---------------TATG--ATGTCGTGCTT--CATTCTGCATCAAGGAT-----------TCATAAGGATTCCCACAC-------TCTTACTGC--------------------T--------------------ACCAA--ACCACACATTGCATAACC--ATC-CAGAG----A----AC-T-------------TA----A---CTA-GT----T----TCCTTTGAT-TCTAAGCATCCGATCTGGTGCCGGATTCGGAGGAGCTGCTGGCCTGGCCGTGCTCT
droYak3 2R:15725796-15726021 + GCTTTCCGCATACCTTTTGGCAAGAAACACGCTGAGATCGCGAGTTCTTTGTGAGTA---------------TACG--ATGTAGTAGTT--GATTGTGCATCAAGAAT-----------TCATAAGGGTTACAACAC-------TCTTACTGC--------------------T--------------------ACCAA--ACCACACATTGCATAACC--ATC-CAGAG----A----AC-T-------------CA----A---CTA-GT----T----TCCTTTGAT-TCGTAGCATCCGATCTGGAGCCGGATTCGGAGGAGCTGCTGGCCTGGCCGTGCTCT
droEug1 scf7180000409672:1650374-1650592 + GCTTTCCGCATACCTTTTGGCAAAAAGCACGCTGAAATCGCGAGTTCCTTGTGAGTA---------------TGAC--A-----TGCTTCACATTTTGCTTCAGGGAA-----------CCGCTTGAACACAGTCAT-------CCTGG-----------------------------------CA---------GATAGCCTTACACATTGCATAACC--ATCA---AA----A----GC-A-------------GA----A---CTA-AT----T----TCCTTTGAT-TTATAGCATCCGTTCTGGAGCTGGATTTGGAGGAGCTGCTGGCCTGGCCGTGCTCT
droBia1 scf7180000301754:5710717-5710928 - GCTTTCCGCATCCCCTTTGGCAAGAAGCACGCTGAGATTGCGAGTTCCTTGTGAGTA---------------TAGG--ATGTTCTGATT--GGTCCAGCGTCAAGGAC-----------TTGCGTGGATTCAGAATC-------CCGGGCTGC--------------------A--------------------AAC----ACCACACATTGCATAACA--CAC-CA-----------------------------------------T-TC----C----TCTTTGTAT-TTGTAGCATCCGATCTGGAGCTGGATTTGGAGGAGCTGCGGGTCTGGCCGTGCTCT
droTak1 scf7180000415138:278083-278289 + GCTTTCCGCATACCTTTTGGCAAGAAGCACGCTGAAATCGCGACTTCCTTGTGAGTA---------------TTAG--TTGTCCTGCTT--GGTGCTGGATCAAGGAC-----------ATACGGGGATTCCGACCCCAAAGACCC---------------------------CG-------T--A---T-------AA--ACCACACATTGCATAACC--AAC-CA----------------------------------------------------------TTCCT-TTGTAGCATCCGCTCTGGAGCTGGATTCGGAGGAGCTGCTGGCCTGGCCGTGCTCT
droEle1 scf7180000491214:820966-821190 + GCTTTCCGCATACCTTTTGGCAAGAAGCACGCTGAGATCGCGACTTCCTTGTGAGTA---------------AAAG--ACATTGTTCTT--GATCCTACATCAAAGGT-----------TTGAAGGGATTTCGGCG--------------TGC--------------------TA-------C-CA---T----AATACACTCCACACATTGCATAACC--ATCA---AG----A----AC-T-------------CA----A---CCAGGT----T----TCTTTTGAT-TTCTAGCATCCGATCTGGAGCTGGATTCGGAGGAGCTGCTGGCCTGGCCGTGCTCT
droRho1 scf7180000778035:82527-82749 + GCTTTCCGTATACCTTTTGGCAAGAAGCACGCTGAAATCGCGAGTTCCTTGTGAGTA---------------TAAC--CCGTTGTGATT--CATCCCATATCAAGGAG-----------TTACAGGGGTTCCGGCGC-------TCTTC-----------------------------------CA---C----AATAC--ACCACACATTGCATAACC--ATCA---AA----A----AC-T-------------CA----A---GCA-GT----T----TCTTTCGATTTTGTAGCATCCGATCTGGAGCAGGATTCGGAGGAGCTGCTGGCCTGGCCGTGCTCT
droFic1 scf7180000453948:1994053-1994270 + GCTTTTCGCATACCTTTTGGCAAGAAGCACGCTGAGATCGCGAGTTCCTTGTAAGTA---------------TTGT--ATATTGTGCCC--TTTCCTCCAAAAATGAT-----------TTACGGGGTTTCCGGTT--------TCCTA--G--------------------------------CA--------TAC----AAAACACATTGCATAACC--AACA---AG----A----AC-T-------------TA----A---CCA-GT----C----TATTT-CAT-TTCTAGCATCCGATCTGGAGCTGGATTTGGTGGAGCTGCTGGCCTGGCGGTGCTTT
droKik1 scf7180000302476:3280996-3281223 - GCTTTCCGCATCCCTTTTGGCAAGAAGCACGCTGAAATCGCGTCGTCCTTGTGAGTA---------------TAAATAAGC---TACATCGCCTCGTGCATCCTGGAA-----------CCACAAGAATTCCTGT---------------------------------GAA----C-----GCGGA---C----CGCAG--AGCACACATTGCATAACC--GCCACATAG----A----AC-T-------------CCAA--A---ATA-AT----G----TCTCTCACT-TTGTAGCATCCGATCTGGAGCTGGATTCGGTGGAGCTGCTGGCCTGGCGGTGCTCT
droAna3 scaffold_13266:10787444-10787680 + GTTTTCCGAGTACCCTTTGGCAAGAAGCACGCTGAGATCGCATCTTCCTTGTAAGTT---------------TTAA--ATGTAACCATG--GATCCTGCAGAAAGG--------------------GATTCAACATTCAAGGGCAC---------------------------TT-------C--A---TA---AAACTG--CGACCCATTGCATAATC--ACAA---GG----A----ATATGA-------GAATGTAAA-A---ACA-ATTTATGTAT-TTTTAATAT-TTTCAGCGTGCGATCTGGCGCAGGATTCGGTGGAGCTGCTGGTCTGGCCCTGCTCT
droBip1 scf7180000396428:1214656-1214887 + GTTTTCCGCGTACCCTTTGGCAAGAAGCACGCTGAAATCGCATCTTCCTTGTAAGTT---------------TTGA--ATACATTCATA--GATCCTGCAGGAAAG--------------------GATTCACGATTCAAGGGCAC---------------------------TT-------C--A---TA---AAC-TG--CAACCCATTGCATAATC--ACAA---GG----A----AT-TCA-------GAATGTTAAAA---CAT-GT-TATA----TTTTAATAT-TTACAGCGTGCGATCTGGCGCAGGATTCGGTGCAGCTGCTGGTCTGGGCTTGCTCT
dp5 3:5361217-5361441 - GCTTTCCGCATCCCATTTGGCAAGAAACACGCTGAAATCGCGTCGTCCTTGTAAGTA---------------AATG--ATGACATCCTG--GTTGGATCATCATAAGA-----------CTACTCGAATTCGGCC---------------------------------CAA----T-----GTGCA--------CAC--AC-AGGCACATTGCATAATC--GTG-CAGA-----------T-T-------------CAAT--A---ACA-AT----GTTTTCCCAATTTC-TTTAAGCGCTCGCTCTGGAGCTGGATTCGGTGGGGCCGCTGGCCTGGCTCTGCTGT
droPer2 scaffold_2:5566410-5566637 - GCTTTCCGCATCCCATTTGGCAAGAAACACGCTGAAATCGCGTCGTCCTTGTAAGTA---------------AATG--ATGACATCCTG--GTCGGATCATCATAAGA-----------CTACTCGAATTCGGCC---------------------------------CAA----T-----GTGCA--------CAC--AC-AGGCACATTGCATAATC--GTG-CAGA-----------T-T-------------CAAT--A---ACA-ATGT-TGTTTTCCCAATTTC-TTTAAGCGCTCGCTCTGGAGCTGGATTCGGTGGGGCCGCTGGCCTGGCTCTGCTGT
droWil2 scf2_1100000004513:4798562-4798786 - GCTTTCCGTATCCCATTTGGCAAGAAGCACGCTGAAATAGCGACGTCCTTGTAAGTTGCCTGATTTGGCGCAAATA--ATAACT---------------ATCTGGGCATCATCAGAATATTATT-----TGCCTCTT-------T--------------------------------------------------------CTTACATATTGCATAATC--AAG-----GTTTTTTAT-GC-T---------GA--TC----G---CTA-AC----T----TCTTTCACC-TTTTAGCATCCGCTCTGGTGCTGGCTTTGGAGGAGCTGCTGGTCTGGGCCTGCTTT
droVir3 scaffold_12875:4553369-4553605 - dvi_5235 GCTTTCCGCATACCCTTTGGCAAGAAGCACGCTGAAATCGCGTCAGCCTTGTAAGTA---------------GAAATAAAA---T----------------------------------------------AAATCA-------TGT----TTATGGTGCTGCTACAT--GTCTGGCAAGAGT--ATA---GCACTT--GCAAAACACGTTGCATAATC--CAAA---GG----TAACAAT-TC-ACACAAA--T-TT-AATATTTATT------CA----TTCTTTGCG-TTTCAGCGTCAGCTCCGGCGCAGGATTCGGAGGTGCCGCTGGCCTGGCCCTGCTCT
droMoj3 scaffold_6496:25518140-25518378 + GCTTTCCGTATACCTTTTGGCAAGAAACACGCTGAAATCGCATCATCCTTGTAAGTA---------------TCAATAAT-----------------------------------------------GTTTAAACAA-------TGTTAATGCATTT-------ATATTAAACAGGAAAGAGAGAA--------CAT--GC-AACCACATTGCATAACC--AATA---AT----CATCAAA-TC-AGACAAT--T-CT-AACATTAATA-AT----GTTACCATTTATAT-TTTTAGCGTACGGTCTGGCGCAGGTTTCGGTGGTGCCGCTGGCTTGGCCTTGCTCT
droGri2 scaffold_15245:397876-398115 + GCTTTTCGCATACCTTTTGGCAAGAAGCACGCGGAAATCGCGACATCCTTGTTAGTA---------------ATATTAAAG---T----------------------------------------------GGCACT-------TGT----GCATATAAGAACTACTG--TTTTGATAGAAAT--GGAAG-CCACTC--GC-ATATCCATTGCATAATC--AAAA---CT----TGATGAA-TA-TTGCAAA--TTTT-AACT---TTT-CT-TCCA----TTTTGTTTG-TTGTAGCGTGCGCTCTGGTGCAGGATTCGGTGGCGCCGCTGGCCTGGCTCTGCTCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GCTTTCCGCATACCTTTTGGCAAGAAGCACGCTGAAATCGCGAGTTCCTTGTAAGTA---------------TATG--ATGTCTTGCTT--GATTCTGCATCATGAAT-----------TCATTGGTGTTCCCACTC-------TCTTAATGC--------------------T--------------------ACCAA--AGCACACATTGCATAACC--ATC-CAGAG----A----AC-T-------------CA----A---CTT-GT----T----TCTTTTACT-TCGTAGCATCCGATCTGGAGCCGGATTCGGAGGAGCTGCTGGCCTGGCCGTGCTTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................TGGCAAGAAGCACGCTGAAATCGCGAGT..............................................................................................................................................................................................................................................................................................................28133.00330000001215330000000
................TTGGCAAGAAGCACGCTGAAATCGCGAGT..............................................................................................................................................................................................................................................................................................................2918.00800000044000000000
................................................................................................................................................................................................................................................................................................................TCTGGAGCCGGATTCGGAGGAGCTGC.................2618.00800000001000070000
.................TGGCAAGAAGCACGCTGAAATCGCGA................................................................................................................................................................................................................................................................................................................2613.00300000021000000000
..........TACCTTTTGGCAAGAAGCACGCTGAA.......................................................................................................................................................................................................................................................................................................................2613.00300000002100000000
.....................................................................................................................................................................................................................................................................................................................AGCCGGATTCGGAGGAGCTGCTGGC.............2512.00202000000000000000
.....................................................................................................................................................................................................................................................................................................................AGCCGGATTCGGAGGAGC....................1812.00201000000001000000
............................................................................................................................................................................................................................................................................................................CCGATCTGGAGCCGGATTCGGAGGA......................2512.00200020000000000000
...................GCAAGAAGCACGCTGAAATCGCGAGT..............................................................................................................................................................................................................................................................................................................2612.00200000011000000000
...............TTTGGCAAGAAGCACGCTGAAATCGCGA................................................................................................................................................................................................................................................................................................................2812.00200000000000020000
.................TGGCAAGAAGCACGCTGAAAT.....................................................................................................................................................................................................................................................................................................................2112.00200000000000002000
........................................................................................................................................................................................................................................................................................................................CGGATTCGGAGGAGCTGCTGGCC............2312.00202000000000000000
.................................................................................................................................................................................................................................CAGAG----A----AC-T-------------CA----A---CTT-GT----T----TC................................................................2012.00220000000000000000
...........................................GTTCCTTGTAAGTA---------------TATG--A............................................................................................................................................................................................................................................................................1912.00220000000000000000
................................................................................................................................................................................................................................................................................................................TCTGGAGCCGGATTCGGAGGAGCTG..................2511.00100000001000000000
...............................................................................................................................................................................................................................................................................................................................GGAGGAGCTGCTGGCCTGGCCGTG....2411.00100000000000010000
.......................................................................................................TGAAT-----------TCATTGGTGTTCCCAC....................................................................................................................................................................................................................2111.00100000100000000000
...............................................................................................................................................................................................................................................................................................................................GGAGGAGCTGCTGGCCTGGCC.......2111.00110000000000000000
......................................................................................................................................................................................................................................................................................................................GCCGGATTCGGAGGAGCTGC.................2011.00110000000000000000
.........................................................................................................................................................................................................................................................................................................CATCCGATCTGGAGCCGGATTC............................2211.00100010000000000000
.............CTTTTGGCAAGAAGCACGCT..........................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
......................................................................................................................................................................................................................................................................................................................GCCGGATTCGGAGGAGCT...................1811.00100100000000000000
..............................................................................................................................................................................................................................................................................................................GATCTGGAGCCGGATTCGGAG........................2111.00101000000000000000
..............TTTTGGCAAGAAGCACGCTGAAA......................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
.....................................................................................................................................................................................................................................................................................................................................GCTGCTGGCCTGGCCGTGCT..2011.00100001000000000000
....TCCGCATACCTTTTGGCAAGAAGCA..............................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
............................................................................................................................................................................................................................................................................................................................TTCGGAGGAGCTGCTGGCCTGGCCGTGC...2811.00101000000000000000
.....CCGCATACCTTTTGGCAAGAA.................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
.............................................................................................................................................................................................................................................................................................................................TCGGAGGAGCTGCTGGCCT...........1911.00101000000000000000
..........................................................................................................................................................................................................................................................................................................................GATTCGGAGGAGCTGCTGGCCTGGCC.......2611.00101000000000000000
..................GGCAAGAAGCACGCTGAAATCGCGAGT..............................................................................................................................................................................................................................................................................................................2711.00100000010000000000
...........................CACGCTGAAATCGCGAGTTCC...........................................................................................................................................................................................................................................................................................................2111.00100000000010000000
..............TTTTGGCAAGAAGCACGC...........................................................................................................................................................................................................................................................................................................................1811.00100010000000000000
....TCCGCATACCTTTTGGCAAGA..................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
.....................AAGAAGCACGCTGAAATCGCGAGT..............................................................................................................................................................................................................................................................................................................2411.00100000001000000000
.........................................................................................................................................................................................................................................................................................................CATCCGATCTGGAGCCGGATTCGGA.........................2511.00100000010000000000
...........................................................................................................................................................................................................................................................................................................................ATTCGGAGGAGCTGCTGGCCTGGCCG......2611.00100100000000000000
.................TGGCAAGAAGCACGCTGAAATCGC..................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
.........................................................................................................................................................................................................................................................................................................................GGATTCGGAGGAGCTGCT................1811.00101000000000000000
.................................................................................................................................................................................................................................................................................................T-TCGTAGCATCCGATCTGGAG....................................2111.00100000001000000000
...............................................................................................................................................................................................................................................................................................................ATCTGGAGCCGGATTCGG..........................1811.00110000000000000000
.................................................................................................................................................................................................................................................................................................................CTGGAGCCGGATTCGGAGGAGCTGC.................2511.00100000001000000000
................TTGGCAAGAAGCACGCTGAA.......................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
.............................................................................................................................................................................................................................................................................................................CGATCTGGAGCCGGATTCGGA.........................2111.00110000000000000000
..................................................................................................................................................................................................................................................................................................................................GGAGCTGCTGGCCTGGCCGTGC...2211.00100100000000000000
............................................................................................................................................................................................................................................................................................................................TTCGGAGGAGCTGCTGGCCTGGCC.......2411.00100000001000000000
........................................CGAGTTCCTTGTAAGTA---------------TAT................................................................................................................................................................................................................................................................................2011.00100001000000000000
...............................................................................................................................GTTCCCACTC-------TCTTAATGC--------------------T--------------------.........................................................................................................................................................2011.00100000100000000000
............................................................................................................................................................................................................................................................................................................................TTCGGAGGAGCTGCTGGCCTGGCCG......2511.00100000000100000000
.........................................................................................................................................................................................................................................................................................................................GGATTCGGAGGAGCTGCTGGCCTGGCC.......2711.00101000000000000000
...............TTTGGCAAGAAGCACGCTGAA.......................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
......................AGAAGCACGCTGAAATCGCG.................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
.................TGGCAAGAAGCACGCTGAAATCGCGAA...............................................................................................................................................................................................................................................................................................................2711.00100000010000000000
..................................................................................................................................................................................................................................................................................................................TGGAGCCGGATTCGGAGGAGCTGC.................2411.00100000010000000000
........................AAGCACGCTGAAATCGCGAGT..............................................................................................................................................................................................................................................................................................................2111.00100001000000000000
...................GCAAGAAGCACGCTGAAATC....................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
...........ACCTTTTGGCAAGAAGCAC.............................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
...............TTTGGCAAGAAGCACGCTGAAATCGCGAGT..............................................................................................................................................................................................................................................................................................................3011.00100000001000000000
......................AGAAGCACGCTGAAATCGCGAGT..............................................................................................................................................................................................................................................................................................................2311.00100010000000000000
................................................................................................................................................................................................................................................................................................................................GAGGAGCTGCTGGCCTGGCCG......2111.00100010000000000000
............................................................................................................................................................................................................................................................................................................................TTCGGAGGAGCTGCTGGCCTGGCCGTA....2711.00100000000000010000
droSec2
GCTTTCCGCATACCTTTTGGCAAGAAGCACGCTGAAATTGCGAGTTCCTTGTAAGTA---------------TATG--ATGTCGTGCTT--GATTCTGCATCATGAAT-----------TCATTAGTGTTCCCACTC-------TCTTAACGC--------------------T--------------------ACCAA--AGCACACATTGCATAACC--ATC-CTGAG----A----AC-T-------------CA----A---CTT-GT----T----TCTTTTAAT-TCGTAGCATCCGATCTGGAGCCGGATTCGGAGGAGCTGCTGGCCTGGCCGTGCTTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................................................................................................................................................................................GCTGCTGGCCTGGCCGTGCT..2013.0030030
.......GCATACCTTTTGGCAAGAAGC...............................................................................................................................................................................................................................................................................................................................2112.0020101
..................................................GTAAGTA---------------TATG--ATGTCGTGCT...................................................................................................................................................................................................................................................................2112.0020002
..........................................................................................................................................................................................................................................................................................................................GATTCGGAGGAGCTGCTGGCC............2112.0022000
.........ATACCTTTTGGCAAGAAGCACGCTGA........................................................................................................................................................................................................................................................................................................................2611.0011000
...................................................................................................................................................................................................................................................................................................................................GAGCTGCTGGCCTGGCCGTGC...2111.0010010
.....................................................................................................................................................................................................................................................................................................................................GCTGCTGGCCTGGCCGTGCTT.2111.0010100
.......GCATACCTTTTGGCAAGAAGCACGCT..........................................................................................................................................................................................................................................................................................................................2611.0010010
.............................CGCTGAAATTGCGAGTTCCTT.........................................................................................................................................................................................................................................................................................................2111.0010001
.....................................................................................................................................................................................................................................................................................................GTAGCATCCGATCTGGAGC...................................1911.0010001
..........TACCTTTTGGCAAGAAGCA..............................................................................................................................................................................................................................................................................................................................1911.0010001
....................................................................................................................................................................................................................................................................................................................GAGCCGGATTCGGAGGAGC....................1911.0010010
................................................................................................................................................................................................................................................................................................................TCTGGAGCCGGATTCGGAGGA......................2111.0010010
.....................................................................................................................................................................................................................................................................................................................AGCCGGATTCGGAGGAGC....................1811.0010010
.....................................................................................................................................................................................................................................................................................................................AGCCGGATTCGGAGGAGCTGCT................2211.0010100
.........ATACCTTTTGGCAAGAAG................................................................................................................................................................................................................................................................................................................................1811.0010010
...TTCCGCATACCTTTTGGCAAGAAGC...............................................................................................................................................................................................................................................................................................................................2511.0010010
........................................................................................................................................................................................................................................................................................................................CGGATTCGGAGGAGCTGCT................1911.0011000
..........................................................................................................................................................................................................................................................................................................ATCCGATCTGGAGCCGGATTCGGAGG.......................2611.0011000
......................AGAAGCACGCTGAAATTGC..................................................................................................................................................................................................................................................................................................................1911.0011000
..........TACCTTTTGGCAAGAAGCACG............................................................................................................................................................................................................................................................................................................................2111.0011000
.....................AAGAAGCACGCTGAAATTGCGAGTT.............................................................................................................................................................................................................................................................................................................2511.0010100
................................................................................................................................................................................................................................................................................................................TCTGGAGCCGGATTCGGAGGAGCTGCT................2711.0010100
......................AGAAGCACGCTGAAATTG...................................................................................................................................................................................................................................................................................................................1811.0010010
........................................................................................................................................................................................................................................................................................................GCATCCGATCTGGAGCCGGA...............................2011.0011000
.........................................................................................................................................................................................................................CC--ATC-CTGAG----A----AC-T-------------CA----A---CTT-G............................................................................2111.0011000
.......GCATACCTTTTGGCAAGAAG................................................................................................................................................................................................................................................................................................................................2011.0011000
.................................................................................................................................................................................................................TTGCATAACC--ATC-CTGAG----A----............................................................................................................1911.0011000
................................................................................................................................................................................................................................................................................................................................GAGGAGCTGCTGGCCTGGCC.......2011.0010010
......................................................................................................................................................................................................................................................................................................................GCCGGATTCGGAGGAGCTGCT................2111.0011000
.................................................................................................................................................................................................................................................................................................................CTGGAGCCGGATTCGGAGGAGCTGCT................2611.0011000
................................TGAAATTGCGAGTTCCTTC........................................................................................................................................................................................................................................................................................................1911.0010010
................TTGGCAAGAAGCACGCTGAAATTG...................................................................................................................................................................................................................................................................................................................2411.0011000
............CCTTTTGGCAAGAAGCACGCT..........................................................................................................................................................................................................................................................................................................................2111.0011000
........CATACCTTTTGGCAAGAAGCACGCTGAAA......................................................................................................................................................................................................................................................................................................................2911.0010100
.................................................................................................................................................................................................................................CTGAG----A----AC-T-------------CA----A---CTT-GT----T----TCT...............................................................2111.0010001
.......................................................TA---------------TATG--ATGTCGTGCTT--GATT............................................................................................................................................................................................................................................................2111.0010100
....................................................................................................................................................................................................................CATAACC--ATC-CTGAG----A----AC-T-------------CA----.....................................................................................2111.0010100
........CATACCTTTTGGCAAGAAGCA..............................................................................................................................................................................................................................................................................................................................2111.0011000
.........ATACCTTTTGGCAAGAAGC...............................................................................................................................................................................................................................................................................................................................1911.0010010
.................................................TGTAAGTA---------------TATG--ATGTCGTGC....................................................................................................................................................................................................................................................................2111.0010001
.........ATACCTTTTGGCAAGAAGCACGCTGAA.......................................................................................................................................................................................................................................................................................................................2711.0010010
...............................................................................................................................................................................................................................................................................................................ATCTGGAGCCGGATTCGGAGG.......................2111.0010010
......................AGAAGCACGCTGAAATTGCGA................................................................................................................................................................................................................................................................................................................2111.0011000
..........TACCTTTTGGCAAGAAGCACGCTGA........................................................................................................................................................................................................................................................................................................................2511.0011000
dm3
GCTTTCCGCATACCTTTTGGCAAGAAGCACGCTGAGATAGCGAGTTCCTTGTAAGTA---------------TATG--CTGTCGTGCTT--GATTCTGCATCATGAAT-----------TCATTAGTGTTCCCGCTC-------TTTTACTGC--------------------T--------------------ACCAA--AGCACACATTGCATAACCCCATC-CAGAG----A----AC-T-------------AA----A---CTA-GT----T----TCTTTTAAT-TCGTAGCATCCGATCTGGAGCCGGATTCGGAGGAGCTGCTGGCCTGGCCGTGCTTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............TTTGGCAAGAAGCACGCTGAGATAGCGAG...............................................................................................................................................................................................................................................................................................................29117.00170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000002000000000000000000000000000100000001000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000001710000
..........TACCTTTTGGCAAGAAGCACGCTGA........................................................................................................................................................................................................................................................................................................................25115.00150000000000000000000000000000000000001010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000100000000000000100000000000001010000000001000000000000000000100000000000000000000000000000000000000101020000000000000000000000000000000
....................CAAGAAGCACGCTGAGATAGC..................................................................................................................................................................................................................................................................................................................21112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000020010000000000000000000000000
.............................................TCCTTGTAAGTA---------------TATG--CTGTC........................................................................................................................................................................................................................................................................21110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
...............TTTGGCAAGAAGCACGCTGAGATAGC..................................................................................................................................................................................................................................................................................................................26110.00100000000000000000000000000000000000000010010010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000100000010000100000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001100000
..........TACCTTTTGGCAAGAAGCACGCTGAGA......................................................................................................................................................................................................................................................................................................................2717.0070000000000000000000001000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TGGAGCCGGATTCGGAGGAGC....................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000010000000000000000000000000000000000000000000000000000000000000000000010000000000000001000000000000100
............................................................................................................................................................................................................................................................................................................................TTCGGAGGAGCTGCTGGCCTGGCCGTGC...2817.0070000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005
.................................................................................................................................................................................................................................................................................................T-TCGTAGCATCCGATCTGGAG....................................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000010000000000000000000000000000000000000000000010000000000000000000000000000
..............TTTTGGCAAGAAGCACGCTGAGATAGC..................................................................................................................................................................................................................................................................................................................2717.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000010000000001000001000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................AGCCGGATTCGGAGGAGCTGC.................2117.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000002100000000000000000000000000100000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TCTGGAGCCGGATTCGGAGGAGCTGC.................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000040000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....................AAGAAGCACGCTGAGATAGCGAGTT.............................................................................................................................................................................................................................................................................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................AGCCGGATTCGGAGGAGCTGCTGG..............2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000002000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000
..............................................CCTTGTAAGTA---------------TATG--CTGTCG.......................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TGTAAGTA---------------TATG--CTGTCGTGC....................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000020
................................................................................................................................................................................................................................................................................................................TCTGGAGCCGGATTCGGAGGAGC....................2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000100000000000000000000000000000000000000000000000000000000000000000010000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................AGGAGCTGCTGGCCTGGCCGT.....2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
................................................................................................................................................................................................................................................................................................................................GAGGAGCTGCTGGCCTGGCCG......2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000010000000000000000000000010000
......................AGAAGCACGCTGAGATAG...................................................................................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010000000000000000000000001000000000000000000000000000002000000000
..............TTTTGGCAAGAAGCACGCTGAGATAG...................................................................................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
......................AGAAGCACGCTGAGATAGC..................................................................................................................................................................................................................................................................................................................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000
............CCTTTTGGCAAGAAGCACGCTGAGA......................................................................................................................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010102000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................TGTCGTGCTT--GATTCTGCATC.....................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CTTTTGGCAAGAAGCACGCTGAGATAGC..................................................................................................................................................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................GCATAACCCCATC-CAGAG----.................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GATCTGGAGCCGGATTCGGAGGAGC....................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................GGATTCGGAGGAGCTGCTGGCC............2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AAGAAGCACGCTGAGATAGC..................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000100000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TCTGGAGCCGGATTCGGAGGAGCT...................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000000000
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.......................................................................................................................................................................................................................................................................................................................................TGCTGGCCTGGCCGTGCT..1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CATACCTTTTGGCAAGAAG................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
...............TTTGGCAAGAAGCACGCTGAGATAGCGA................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CGCATACCTTTTGGCAAGAAGCACGC...........................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.....................................................................................................................................................................................................................................................................................................................AGCCGGATTCGGAGGAGCTGCTGGCC............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................CGAGTTCCTTGTAAGTA---------------TATG--CTG..........................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................CATAACCCCATC-CAGAG----A----AC-T-------------...........................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ACCTTTTGGCAAGAAGCACGC...........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................GTAGCATCCGATCTGGAGCCGGAT..............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...................................................TAAGTA---------------TATG--CTGTCGTGCTT--G...............................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..TTTCCGCATACCTTTTGGCAAGA..................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................AT-TCGTAGCATCCGATCTGGAA....................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................CGGAGGAGCTGCTGGCCTGG.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................ACGCTGAGATAGCGAGTT.............................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TTTGGCAAGAAGCACGCT..........................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TTGGCAAGAAGCACGCTGAGATAGCGAGT..............................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GCTTTCCGCATACCTTTTGGCAAGAAGCACGCTGAGATCGCAAGTTCCTTGTGAGTA---------------TATG--ATGTCGTGCTT--CATTCTGCATCAAGGAT-----------TCATAAGGATTCCCACAC-------TCTTACTGC--------------------T--------------------ACCAA--ACCACACATTGCATAACC--ATC-CAGAG----A----AC-T-------------TA----A---CTA-GT----T----TCCTTTGAT-TCTAAGCATCCGATCTGGTGCCGGATTCGGAGGAGCTGCTGGCCTGGCCGTGCTCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................AGAAGCACGCTGAGATCGCA.................................................................................................................................................................................................................................................................................................................2013.0033000000
...................................................................................................................................................................................................................................................................................................................GGTGCCGGATTCGGAGGAGCT...................2112.0022000000
..............TTTTGGCAAGAAGCACGCTGAGATCGC..................................................................................................................................................................................................................................................................................................................2712.0021100000
.....................AAGAAGCACGCTGAGATCGCA.................................................................................................................................................................................................................................................................................................................2112.0022000000
.........ATACCTTTTGGCAAGAAGCACGC...........................................................................................................................................................................................................................................................................................................................2312.0020000200
.........................................................................................................................................................................................................................................................................................................................GGATTCGGAGGAGCTGCTGGCCTGGCCG......2811.0011000000
.............................................................................................................................................................................................................................................................................................................................TCGGAGGAGCTGCTGGCCTGGCCGT.....2511.0011000000
..........................GCACGCTGAGATCGCAAGTTCC...........................................................................................................................................................................................................................................................................................................2211.0010100000
................................................................................................................................................................................................................................................................................................................TCTGGTGCCGGATTCGGAGGA......................2111.0011000000
...................................................................................................................................................................................................................................................................................................................GGTGCCGGATTCGGAGGAGCTGCT................2411.0011000000
.....................................................................................................................................................................................................................................................................................................................................GCTGCTGGCCTGGCCGTGCT..2011.0011000000
..........................GCACGCTGAGATCGCAAGTTCCTTC........................................................................................................................................................................................................................................................................................................2511.0010000100
.....................................................................................................................................................................................................................................................................................................................TGCCGGATTCGGAGGAGCTGCTGG..............2411.0011000000
................................................................................................................................................................................................................................................................................................................................GAGGAGCTGCTGGCCTGGC........1911.0010100000
.............................................................................................................................................................................................................................................................................................................CGATCTGGTGCCGGATTCGGA.........................2111.0011000000
.....................................................................................................................................................................................................................................................................................................................TGCCGGATTCGGAGGAGCTGCTGGC.............2511.0011000000
............CCTTTTGGCAAGAAGCACGCT..........................................................................................................................................................................................................................................................................................................................2111.0011000000
..............................................................................................................................................................................................................................................................................................................GATCTGGTGCCGGATTCGGAGGAGCT...................2611.0010000100
.................................................................................................................................................................................................................................................................................................................................AGGAGCTGCTGGCCTGGCCGTGCTC.2511.0010100000
..............................................................................................................................................................................................................................................................................................................GATCTGGTGCCGGATTCGGAGGA......................2311.0010100000
.........ATACCTTTTGGCAAGAAGCACGCTGA........................................................................................................................................................................................................................................................................................................................2611.0011000000
.CTTTCCGCATACCTTTTG........................................................................................................................................................................................................................................................................................................................................1811.0010001000
.....CCGCATACCTTTTGGCAAGA..................................................................................................................................................................................................................................................................................................................................2011.0010001000
................TTGGCAAGAAGCACGCTGAG.......................................................................................................................................................................................................................................................................................................................2011.0010000100
........................AAGCACGCTGAGATCGCA.................................................................................................................................................................................................................................................................................................................1811.0010000010
...........ACCTTTTGGCAAGAAGCACGC...........................................................................................................................................................................................................................................................................................................................2111.0010000100
..............................................................................................................................................................................................................................................................................................................GATCTGGTGCCGGATTCGGAGGAGCTAA.................2811.0010000100
.........ATACCTTTTGGCAAGAAGC...............................................................................................................................................................................................................................................................................................................................1911.0010000010
............................ACGCTGAGATCGCAAGTTCCT..........................................................................................................................................................................................................................................................................................................2111.0010001000
.........................................................................................................................................................................................................................................................................................................................GGATTCGGAGGAGCTGCTGGCCT...........2311.0011000000
...............TTTGGCAAGAAGCACGCTGAGATCGCA.................................................................................................................................................................................................................................................................................................................2711.0010000100
..............................................................................................................................................................................................................................................................................................................GATCTGGTGCCGGATTCGGAGGAGC....................2511.0010000100
.........................................................................................................................................................................................................................................................................................................................GGATTCGGAGGAGCTGCTG...............1911.0011000000
.......GCATACCTTTTGGCAAGAAGC...............................................................................................................................................................................................................................................................................................................................2111.0010000100
...............TTTGGCAAGAAGCACGCTGAGATC....................................................................................................................................................................................................................................................................................................................2411.0011000000
...................................................................................................................................................................................................................................................................................................................GGTGCCGGATTCGGAGGAGC....................2011.0011000000
..............TTTTGGCAAGAAGCACGCTGAGATCGCA.................................................................................................................................................................................................................................................................................................................2811.0011000000
...........................................................................................................................................................................................................................................................................................................................ATTCGGAGGAGCTGCTGGC.............1911.0010100000
.....................AAGAAGCACGCTGAGATCG...................................................................................................................................................................................................................................................................................................................1911.0011000000
........................................................................................................................................................................................................................................................................................................................................GCTGGCCTGGCCGTGCTCT1911.0011000000
........................................................................................................................................................................................................................................................................................................................CGGATTCGGAGGAGCTGCT................1911.0011000000
........................AAGCACGCTGAGATCGCAAGT..............................................................................................................................................................................................................................................................................................................2111.0010000100
.........................AGCACGCTGAGATCGCAAGTT.............................................................................................................................................................................................................................................................................................................2111.0010000010
droYak3
GCTTTCCGCATACCTTTTGGCAAGAAACACGCTGAGATCGCGAGTTCTTTGTGAGTA---------------TACG--ATGTAGTAGTT--GATTGTGCATCAAGAAT-----------TCATAAGGGTTACAACAC-------TCTTACTGC--------------------T--------------------ACCAA--ACCACACATTGCATAACC--ATC-CAGAG----A----AC-T-------------CA----A---CTA-GT----T----TCCTTTGAT-TCGTAGCATCCGATCTGGAGCCGGATTCGGAGGAGCTGCTGGCCTGGCCGTGCTCTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................................................................................................................TCGGAGGAGCTGCTGGCCTGGCCGTGCTC.29120.0020000000000020
................TTGGCAAGAAACACGCTGAGATCGCGAG...............................................................................................................................................................................................................................................................................................................28118.0018000000000018
...............TTTGGCAAGAAACACGCTGAGATCGCGAG...............................................................................................................................................................................................................................................................................................................29116.0016000000000016
................TTGGCAAGAAACACGCTGAGATCGCG.................................................................................................................................................................................................................................................................................................................26114.0014000000000014
...........................................................................................................................................................................................................................................................................................................................ATTCGGAGGAGCTGCTGGCCTGGC........2414.00440000000000
.........................AACACGCTGAGATCGCGAGTT.............................................................................................................................................................................................................................................................................................................2113.00302100000000
..........TACCTTTTGGCAAGAAACACGCTGAGAT.....................................................................................................................................................................................................................................................................................................................2812.00202000000000
.................................................................................................................................................................................................................................................................................................................................AGGAGCTGCTGGCCTGGCCGTGCT..2412.00220000000000
.....................................................................................................................................................................................................................................................................................................................................GCTGCTGGCCTGGCCGTGCT..2012.00202000000000
.........ATACCTTTTGGCAAGAAACACGCTGA........................................................................................................................................................................................................................................................................................................................2611.00101000000000
............................................................................................................................................................................................................................................................................................................................TTCGGAGGAGCTGCTGGCCTGGCCG......2511.00101000000000
..................................................................................................................................................................................................................................................................................................................TGGAGCCGGATTCGGAGGAGC....................2111.00100000010000
.................TGGCAAGAAACACGCTGAGATCGCGAG...............................................................................................................................................................................................................................................................................................................2711.00101000000000
.................................................................................................................................................................................................................................................................................................................CTGGAGCCGGATTCGGAGG.......................1911.00101000000000
.................................................................................................................................................................................................................................................................................................................CTGGAGCCGGATTCGGAGGAG.....................2111.00101000000000
.....................AAGAAACACGCTGAGATCGCGAGT..............................................................................................................................................................................................................................................................................................................2411.00100000010000
........................................................A---------------TACG--ATGTAGTAGTT--GATTGTGCAT......................................................................................................................................................................................................................................................2611.00100000010000
.................................................................................................................................................................................................................................................................................................................................AGGAGCTGCTGGCCTGGCCG......2011.00110000000000
..............................................................................................................................................................................................................................................................................................................GATCTGGAGCCGGATTCGGAGGA......................2311.00101000000000
....................................................................................................................................................................................................................................................................................................................................AGCTGCTGGCCTGGCCGTGCT..2111.00101000000000
....TCCGCATACCTTTTGGCAAGAAACAA.............................................................................................................................................................................................................................................................................................................................2611.00101000000000
...............TTTGGCAAGAAACACGCTGAGATCGCGA................................................................................................................................................................................................................................................................................................................2811.00101000000000
.............................................................................................................................................................................................................................................................................................................................TCGGAGGAGCTGCTGGCCT...........1911.00101000000000
.....................................................................................................................................................................................................................................................................................................................................GCTGCTGGCCTGGCCGTG....1811.00101000000000
..........TACCTTTTGGCAAGAAACACGCTGAG.......................................................................................................................................................................................................................................................................................................................2611.00101000000000
.................................................................................................................................................................................................................................................................................................................CTGGAGCCGGATTCGGAGGAGCT...................2311.00100000010000
...............TTTGGCAAGAAACACGCTGAGATC....................................................................................................................................................................................................................................................................................................................2411.00100000010000
....................CAAGAAACACGCTGAGATCGC..................................................................................................................................................................................................................................................................................................................2111.00100000010000
........................AAACACGCTGAGATCGCGAGTT.............................................................................................................................................................................................................................................................................................................2211.00100000010000
..............................GCTGAGATCGCGAGTTCT...........................................................................................................................................................................................................................................................................................................1811.00101000000000
............................ACGCTGAGATCGCGAGTTCT...........................................................................................................................................................................................................................................................................................................2011.00100000010000
...TTCCGCATACCTTTTGGCAAGA..................................................................................................................................................................................................................................................................................................................................2211.00100000100000
..........TACCTTTTGGCAAGAAACACGCTGAGA......................................................................................................................................................................................................................................................................................................................2711.00101000000000
..............................................................................................................................................................................................................................................................................................................................CGGAGGAGCTGCTGGCCTGGCCGTGC...2611.00101000000000
...............................................................................................................................................................................................................................................................................................................................GGAGGAGCTGCTGGCCTGGCCGTGC...2511.00101000000000
...............TTTGGCAAGAAACACGCTGAGAT.....................................................................................................................................................................................................................................................................................................................2311.00100000010000
................................................................................................................................................................................................................................................................................................................................GAGGAGCTGCTGGCCTGGCCGT.....2211.00100000010000
..............TTTTGGCAAGAAACACGC...........................................................................................................................................................................................................................................................................................................................1811.00101000000000
.......................GAAACACGCTGAGATCGCGAGTTC............................................................................................................................................................................................................................................................................................................2411.00100000100000
.................................................................................................................................................................................................................................................................................................................CTGGAGCCGGATTCGGAGGT......................2011.00100100000000
.................................................................................................................................................................................................................................................................................................................CTGGAGCCGGATTCGGAGGAGCTGC.................2511.00110000000000
.........................................................................................................................................................................................................................................................................................................................GGATTCGGAGGAGCTGCTGGCC............2211.00100000010000
...................................................................................................................................................................................................................................................................................................................GGAGCCGGATTCGGAGGAGC....................2011.00100000010000
.........................AACACGCTGAGATCGCGAGT..............................................................................................................................................................................................................................................................................................................2011.00100000010000
.....................................................................................AGTT--GATTGTGCATCAAGAAT-----------TCATAAG.............................................................................................................................................................................................................................2811.00100000010000
.........................AACACGCTGAGATCGCGAGTTCTTTC........................................................................................................................................................................................................................................................................................................2611.00101000000000
............................................................................................................................................................................................................................................................................................................CCGATCTGGAGCCGGATTCGGA.........................2211.00101000000000
................................................................................................................................................................................................................................................................................................................TCTGGAGCCGGATTCGGAGGAGC....................2311.00100000010000
............................................................................................................................................................................................................................................................................................................................TTCGGAGGAGCTGCTGGCCTGGCCGTGCT..2911.00110000000000
.........ATACCTTTTGGCAAGAAACACGCTGAG.......................................................................................................................................................................................................................................................................................................................2711.00100000010000
..............................................................................................................................................................................................................................................................................................................GATCTGGAGCCGGATTCGGAGGAGCT...................2611.00110000000000
.........ATACCTTTTGGCAAGAAACAC.............................................................................................................................................................................................................................................................................................................................2111.00100000010000
.............................CGCTGAGATCGCGAGTTCT...........................................................................................................................................................................................................................................................................................................1911.00110000000000
..TTTCCGCATACCTTTTGGCAAGA..................................................................................................................................................................................................................................................................................................................................2311.00100000010000
........................AAACACGCTGAGATCGCGAGT..............................................................................................................................................................................................................................................................................................................2111.00100000010000
..........TACCTTTTGGCAAGAAAC...............................................................................................................................................................................................................................................................................................................................1811.00100000100000
..........................................................................................................AT-----------TCATAAGGGTTACAACAC-------TC.........................................................................................................................................................................................................2211.00101000000000
..............TTTTGGCAAGAAACACGCTGAGATCGCG.................................................................................................................................................................................................................................................................................................................2811.00100000010000
droEug1
GCTTTCCGCATACCTTTTGGCAAAAAGCACGCTGAAATCGCGAGTTCCTTGTGAGTA---------------TGAC--A-----TGCTTCACATTTTGCTTCAGGGAA-----------CCGCTTGAACACAGTCAT-------CCTGG-----------------------------------CA---------GATAGCCTTACACATTGCATAACC--ATCA---AA----A----GC-A-------------GA----A---CTA-AT----T----TCCTTTGAT-TTATAGCATCCGTTCTGGAGCTGGATTTGGAGGAGCTGCTGGCCTGGCCGTGCTCTSizeHit CountTotal NormTotal
No Reads
droBia1
GCTTTCCGCATCCCCTTTGGCAAGAAGCACGCTGAGATTGCGAGTTCCTTGTGAGTA---------------TAGG--ATGTTCTGATT--GGTCCAGCGTCAAGGAC-----------TTGCGTGGATTCAGAATC-------CCGGGCTGC--------------------A--------------------AAC----ACCACACATTGCATAACA--CAC-CA-----------------------------------------T-TC----C----TCTTTGTAT-TTGTAGCATCCGATCTGGAGCTGGATTTGGAGGAGCTGCGGGTCTGGCCGTGCTCTSizeHit CountTotal NormTotal
No Reads
droTak1
GCTTTCCGCATACCTTTTGGCAAGAAGCACGCTGAAATCGCGACTTCCTTGTGAGTA---------------TTAG--TTGTCCTGCTT--GGTGCTGGATCAAGGAC-----------ATACGGGGATTCCGACCCCAAAGACCC---------------------------CG-------T--A---T-------AA--ACCACACATTGCATAACC--AAC-CA----------------------------------------------------------TTCCT-TTGTAGCATCCGCTCTGGAGCTGGATTCGGAGGAGCTGCTGGCCTGGCCGTGCTCTSizeHit CountTotal NormTotal
No Reads
droEle1
GCTTTCCGCATACCTTTTGGCAAGAAGCACGCTGAGATCGCGACTTCCTTGTGAGTA---------------AAAG--ACATTGTTCTT--GATCCTACATCAAAGGT-----------TTGAAGGGATTTCGGCG--------------TGC--------------------TA-------C-CA---T----AATACACTCCACACATTGCATAACC--ATCA---AG----A----AC-T-------------CA----A---CCAGGT----T----TCTTTTGAT-TTCTAGCATCCGATCTGGAGCTGGATTCGGAGGAGCTGCTGGCCTGGCCGTGCTCTSizeHit CountTotal NormTotal
No Reads
droRho1
GCTTTCCGTATACCTTTTGGCAAGAAGCACGCTGAAATCGCGAGTTCCTTGTGAGTA---------------TAAC--CCGTTGTGATT--CATCCCATATCAAGGAG-----------TTACAGGGGTTCCGGCGC-------TCTTC-----------------------------------CA---C----AATAC--ACCACACATTGCATAACC--ATCA---AA----A----AC-T-------------CA----A---GCA-GT----T----TCTTTCGATTTTGTAGCATCCGATCTGGAGCAGGATTCGGAGGAGCTGCTGGCCTGGCCGTGCTCTSizeHit CountTotal NormTotal
No Reads
droFic1
GCTTTTCGCATACCTTTTGGCAAGAAGCACGCTGAGATCGCGAGTTCCTTGTAAGTA---------------TTGT--ATATTGTGCCC--TTTCCTCCAAAAATGAT-----------TTACGGGGTTTCCGGTT--------TCCTA--G--------------------------------CA--------TAC----AAAACACATTGCATAACC--AACA---AG----A----AC-T-------------TA----A---CCA-GT----C----TATTT-CAT-TTCTAGCATCCGATCTGGAGCTGGATTTGGTGGAGCTGCTGGCCTGGCGGTGCTTTSizeHit CountTotal NormTotal
No Reads
droKik1
GCTTTCCGCATCCCTTTTGGCAAGAAGCACGCTGAAATCGCGTCGTCCTTGTGAGTA---------------TAAATAAGC---TACATCGCCTCGTGCATCCTGGAA-----------CCACAAGAATTCCTGT---------------------------------GAA----C-----GCGGA---C----CGCAG--AGCACACATTGCATAACC--GCCACATAG----A----AC-T-------------CCAA--A---ATA-AT----G----TCTCTCACT-TTGTAGCATCCGATCTGGAGCTGGATTCGGTGGAGCTGCTGGCCTGGCGGTGCTCTSizeHit CountTotal NormTotal
No Reads
droAna3
GTTTTCCGAGTACCCTTTGGCAAGAAGCACGCTGAGATCGCATCTTCCTTGTAAGTT---------------TTAA--ATGTAACCATG--GATCCTGCAGAAAGG--------------------GATTCAACATTCAAGGGCAC---------------------------TT-------C--A---TA---AAACTG--CGACCCATTGCATAATC--ACAA---GG----A----ATATGA-------GAATGTAAA-A---ACA-ATTTATGTAT-TTTTAATAT-TTTCAGCGTGCGATCTGGCGCAGGATTCGGTGGAGCTGCTGGTCTGGCCCTGCTCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................AGCACGCTGAGATCGCATC...............................................................................................................................................................................................................................................................................................................1914.004300010
...............TTTGGCAAGAAGCACGCTGAGATCGCA.................................................................................................................................................................................................................................................................................................................2713.003200010
............................................................................................................................................................................................................................................................................................................................TTCGGTGGAGCTGCTGGTCTGGCCC......2513.003120000
......................AGAAGCACGCTGAGATCGCA.................................................................................................................................................................................................................................................................................................................2013.003200010
.......................................................................................................................................................................................................................................................................................................................................TGCTGGTCTGGCCCTGCTC.1912.002200000
..........................GCACGCTGAGATCGCATC...............................................................................................................................................................................................................................................................................................................1812.002200000
......................................................................................................................................................................................................................................................................................................................GCAGGATTCGGTGGAGCT...................1812.002100010
...........ACCCTTTGGCAAGAAGCACGCTGAGAT.....................................................................................................................................................................................................................................................................................................................2712.002010010
..TTTCCGAGTACCCTTTGGCAA....................................................................................................................................................................................................................................................................................................................................2112.002200000
..............CTTTGGCAAGAAGCACGCTGAGA......................................................................................................................................................................................................................................................................................................................2312.002200000
..............CTTTGGCAAGAAGCACGCTGAGATCGCA.................................................................................................................................................................................................................................................................................................................2812.002200000
.................TGGCAAGAAGCACGCTGAGATCGCA.................................................................................................................................................................................................................................................................................................................2512.002200000
..........................................................................................................................................................................................................................................................................................................................GATTCGGTGGAGCTGCTGGTCTGGCCC......2712.002200000
.....................................................................................................................................................................................................................................................................................................................................GCTGCTGGTCTGGCCCTGCTCT2212.002200000
........................AAGCACGCTGAGATCGCATC...............................................................................................................................................................................................................................................................................................................2012.002200000
..................................................................................................................................................................................................................................................................................................................................GGAGCTGCTGGTCTGGCCCTGCT..2312.002200000
....................................................................................................................................................................................................................................................................................................................GCGCAGGATTCGGTGGAG.....................1812.002010001
...................................................................................................................................................................................................................................................................................................................GGCGCAGGATTCGGTGGAGCT...................2112.002110000
...TTCCGAGTACCCTTTGGCAAGA..................................................................................................................................................................................................................................................................................................................................2212.002011000
.TTTTCCGAGTACCCTTTGGCAAGA..................................................................................................................................................................................................................................................................................................................................2411.001100000
...............TTTGGCAAGAAGCACGCTGAG.......................................................................................................................................................................................................................................................................................................................2111.001100000
..............................................................................................................................................................................................................................................................................................................................CGGTGGAGCTGCTGGTCTGGCC.......2211.001100000
.......................GAAGCACGCTGAGATCGCA.................................................................................................................................................................................................................................................................................................................1911.001100000
.............CCTTTGGCAAGAAGCACGCTGA........................................................................................................................................................................................................................................................................................................................2211.001010000
................TTGGCAAGAAGCACGCTGAGA......................................................................................................................................................................................................................................................................................................................2111.001100000
....................................................................................................................................................................................................................................................................................................................GCGCAGGATTCGGTGGAGCTGCT................2311.001100000
..........................GCACGCTGAGATCGCATCTTCC...........................................................................................................................................................................................................................................................................................................2211.001000010
...................................................................................................................................................................................................................................................................................................................GGCGCAGGATTCGGTGGA......................1811.001001000
................TTGGCAAGAAGCACGCTGA........................................................................................................................................................................................................................................................................................................................1911.001100000
..............................................................................................................................................................................................................................................................................................................GATCTGGCGCAGGATTCGGTGGA......................2311.001100000
..............................................................................................................................................................................................................................................................................................................GATCTGGCGCAGGATTCGGTGG.......................2211.001010000
.........................................................................................................................................................................................................................................................................................................................GGATTCGGTGGAGCTGCT................1811.001100000
.................................................................................................................................................................................................................................................................................................................CTGGCGCAGGATTCGGTGGAGCT...................2311.001100000
..............CTTTGGCAAGAAGCACGCTGAGATC....................................................................................................................................................................................................................................................................................................................2511.001100000
.................................................................................................................................................................................................................................................................................................................CTGGCGCAGGATTCGGTGGA......................2011.001100000
..................................................................................................................................................................................................................................................................................................................TGGCGCAGGATTCGGTGGAG.....................2011.001100000
....................................................................................................................................................................................................................................................................................................................GCGCAGGATTCGGTGGAGC....................1911.001100000
.....................................................................................................................................................................................................................................................................................................................................GCTGCTGGTCTGGCCCTG....1811.001000001
....................................................................................................................................................................................................................................................................................................................................AGCTGCTGGTCTGGCCCTGCT..2111.001100000
...........................................................................................................................................................................................................................................................................................................TGCGATCTGGCGCAGGATTCGGTGGAGC....................2811.001100000
.........................................................................................................................................................................................................................................................................................................................GGATTCGGTGGAGCTGCTGGTCTGGCC.......2711.001100000
........................AAGCACGCTGAGATCGCAT................................................................................................................................................................................................................................................................................................................1911.001000010
..........................GCACGCTGAGATCGCATCTTCCTTCGT......................................................................................................................................................................................................................................................................................................2711.001000010
............................................................................................................................................................................................................................................................................................................GCGATCTGGCGCAGGATTCGGTGGAGC....................2711.001100000
.......GAGTACCCTTTGGCAAGAAGC...............................................................................................................................................................................................................................................................................................................................2111.001000010
............................................................................................................................................................................................................................................................................................................GCGATCTGGCGCAGGATTCGGTGGA......................2511.001100000
........................AAGCACGCTGAGATCGCATCTTCCTTC........................................................................................................................................................................................................................................................................................................2711.001100000
.....................AAGAAGCACGCTGAGATCGCA.................................................................................................................................................................................................................................................................................................................2111.001100000
................TTGGCAAGAAGCACGCTGAGATCG...................................................................................................................................................................................................................................................................................................................2411.001010000
...........................................................................................................................................................................................................................................................................................TTAATAT-TTTCAGCGTGCGAT..........................................2111.001100000
..................GGCAAGAAGCACGCTGAGAT.....................................................................................................................................................................................................................................................................................................................2011.001010000
.....................................................................................................................................................................................................................................................................................................................CGCAGGATTCGGTGGAGCTGCTGGTCT...........2711.001100000
...........................................................................................................................................................................................................................................................................................................................ATTCGGTGGAGCTGCTGGT.............1911.001100000
.......................................................................................................................................................................................................................................................................................................................................TGCTGGTCTGGCCCTGCT..1811.001100000
..................................................................................................................................................................................................................................................................................................................TGGCGCAGGATTCGGTGGAGCT...................2211.001100000
...........................................................................................................................................................................................................................................................................................................................ATTCGGTGGAGCTGCTGGTCTGGCCC......2611.001100000
..........................................................................................................................................................................................................................................................................................................................GATTCGGTGGAGCTGCTGGTCTGGCCCT.....2811.001100000
............................................................................................................................................................................................................................................................................................................................TTCGGTGGAGCTGCTGGT.............1811.001100000
.....................................................................................................................................................................................................................................................................................................................CGCAGGATTCGGTGGAGCT...................1911.001100000
............CCCTTTGGCAAGAAGCACGCTGAGAT.....................................................................................................................................................................................................................................................................................................................2611.001010000
....................................................................................................................................................................................................................................................................................................................GCGCAGGATTCGGTGGAGCTT..................2111.001100000
.......................GAAGCACGCTGAGATCGC..................................................................................................................................................................................................................................................................................................................1811.001010000
................................................................................................................................................................................................................................................................................................................TCTGGCGCAGGATTCGGTGGAGCTGCT................2711.001100000
.......................GAAGCACGCTGAGATCGCATCT..............................................................................................................................................................................................................................................................................................................2211.001100000
.................TGGCAAGAAGCACGCTGAGATCGCATC...............................................................................................................................................................................................................................................................................................................2711.001100000
.........................AGCACGCTGAGATCGCATCTTCCT..........................................................................................................................................................................................................................................................................................................2411.001000001
...................................................................................................................................................................................................................................................................................................................................GAGCTGCTGGTCTGGCCCTGCT..2211.001100000
...................................................................................................................................................................................................................................................................................................................GGCGCAGGATTCGGTGGAG.....................1911.001100000
...................................................................................................................................................................................................................................................................................................................GGCGCAGGATTCGGTGGAGCTGCTG...............2511.001000010
.............................................................................................................................................................................................................................................................................................................................TCGGTGGAGCTGCTGGTCTGGCCCTG....2611.001100000
...........ACCCTTTGGCAAGAAGCACGCTG.........................................................................................................................................................................................................................................................................................................................2311.001100000
............................................................................................................................................................................................................................................................................................................GCGATCTGGCGCAGGATTCGGTGG.......................2411.001100000
GTTTTCCGAGTACCCTTTGGCAAGAAGC...............................................................................................................................................................................................................................................................................................................................2811.001010000
..........................................................................................................................................................................................................................................................................................................GTGCGATCTGGCGCAGGATTCGGT.........................2411.001000010
...........................................................................................................................................................................................................................................................................................................................ATTCGGTGGAGCTGCTGGTC............2011.001100000
...........................................................................................................................................................................................................................................................................................................TGCGATCTGGCGCAGGATTCGGTGGAG.....................2711.001100000
.............................................................................................................................................................................................................................................................................................................................TCGGTGGAGCTGCTGGTCT...........1911.001100000
..................................................................................................................................................................................................................................................................................................................................GGAGCTGCTGGTCTGGCCC......1911.001100000
...........................................................................................................................................................................................................................................................................................................TGCGATCTGGCGCAGGATTC............................2011.001100000
..TTTCCGAGTACCCTTTGGCA.....................................................................................................................................................................................................................................................................................................................................2011.001100000
...................GCAAGAAGCACGCTGAGATCG...................................................................................................................................................................................................................................................................................................................2111.001100000
..............................................................................................................................................................................................................................................................................................................GATCTGGCGCAGGATTCGGTGGAGC....................2511.001010000
.............................................................................................................................................................................................................................................................................................................CGATCTGGCGCAGGATTCGGT.........................2111.001010000
.....................................................................................................................................................................................................................................................................................................................................GCTGCTGGTCTGGCCCTGCTC.2111.001100000
......................................................................................................................................................................................................................................................................................................................................CTGCTGGTCTGGCCCTGC...1811.001100000
.............................................................................................................................................................................................................................................................................................................................TCGGTGGAGCTGCTGGTCTGGCCCT.....2511.001100000
................................................................................................................................................................................................................................................................................................................................GTGGAGCTGCTGGTCTGGCCCTGCT..2511.001100000
.........................................................................................................................................................................................................................................................................................................CGTGCGATCTGGCGCAGGATTCGG..........................2411.001100000
................................TGAGATCGCATCTTCCTTCG.......................................................................................................................................................................................................................................................................................................2011.001100000
...............TTTGGCAAGAAGCACGCTGA........................................................................................................................................................................................................................................................................................................................2011.001100000
.......................GAAGCACGCTGAGATCGCATC...............................................................................................................................................................................................................................................................................................................2111.001100000
........................................................................................................................................................................................................................................................................................................................................GCTGGTCTGGCCCTGCTCT1911.001100000
................................................................................................................................................................................................................................................................................................................TCTGGCGCAGGATTCGGTG........................1911.001010000
...............................................................................................................................................................................................................................................................................................................................GGTGGAGCTGCTGGTCTGGCCC......2211.001100000
........................AAGCACGCTGAGATCGCATCT..............................................................................................................................................................................................................................................................................................................2111.001010000
.................................................................................................................................................................................................................................................................................................................................TGGAGCTGCTGGTCTGGCCC......2011.001100000
............................ACGCTGAGATCGCATCTTCCTT.........................................................................................................................................................................................................................................................................................................2211.001010000
................TTGGCAAGAAGCACGCTGAGATCGC..................................................................................................................................................................................................................................................................................................................2511.001100000
..................GGCAAGAAGCACGCTGAGATCGC..................................................................................................................................................................................................................................................................................................................2311.001010000
..............CTTTGGCAAGAAGCACGCTGAG.......................................................................................................................................................................................................................................................................................................................2211.001100000
..............................................................................................................................................................................................................................................................................................................GATCTGGCGCAGGATTCGGT.........................2011.001010000
........................AAGCACGCTGAGATCGCATCTTCC...........................................................................................................................................................................................................................................................................................................2411.001100000
.........................................................................................................................................................................................................................................................................................................CGTGCGATCTGGCGCAGGATTCG...........................2311.001100000
..................................................................................................................................................................................................................................................................................................................TGGCGCAGGATTCGGTGGAGCTGCT................2511.001100000
...................................................................................................................................................................................................................................................................................................................GGCGCAGGATTCGGTGGAGCTGCT................2411.001000010
......................AGAAGCACGCTGAGATCGC..................................................................................................................................................................................................................................................................................................................1911.001100000
droBip1
GTTTTCCGCGTACCCTTTGGCAAGAAGCACGCTGAAATCGCATCTTCCTTGTAAGTT---------------TTGA--ATACATTCATA--GATCCTGCAGGAAAG--------------------GATTCACGATTCAAGGGCAC---------------------------TT-------C--A---TA---AAC-TG--CAACCCATTGCATAATC--ACAA---GG----A----AT-TCA-------GAATGTTAAAA---CAT-GT-TATA----TTTTAATAT-TTACAGCGTGCGATCTGGCGCAGGATTCGGTGCAGCTGCTGGTCTGGGCTTGCTCTSizeHit CountTotal NormTotal
No Reads
dp5
GCTTTCCGCATCCCATTTGGCAAGAAACACGCTGAAATCGCGTCGTCCTTGTAAGTA---------------AATG--ATGACATCCTG--GTTGGATCATCATAAGA-----------CTACTCGAATTCGGCC---------------------------------CAA----T-----GTGCA--------CAC--AC-AGGCACATTGCATAATC--GTG-CAGA-----------T-T-------------CAAT--A---ACA-AT----GTTTTCCCAATTTC-TTTAAGCGCTCGCTCTGGAGCTGGATTCGGTGGGGCCGCTGGCCTGGCTCTGCTGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................GGCAAGAAACACGCTGAAATCGC..................................................................................................................................................................................................................................................................................................................2314.0040000000400
....................................................................................................................................................................................................................................................................................................................................GGCCGCTGGCCTGGCTCTGCT..2113.0030300000000
.............................................................................................................................................................................................................................................................................................................................TCGGTGGGGCCGCTGGCCTGG.........2112.0020200000000
............................ACGCTGAAATCGCGTCGTCC...........................................................................................................................................................................................................................................................................................................2012.0020200000000
.....................................................................................................................................................................................................................................................................................................................AGCTGGATTCGGTGGGGC....................1812.0020110000000
.......................................................................................................................................................................................................................................................................................................................................CGCTGGCCTGGCTCTGCTG.1911.0010100000000
...............................CTGAAATCGCGTCGTCCTTG........................................................................................................................................................................................................................................................................................................2011.0010100000000
.....................AAGAAACACGCTGAAATCGCG.................................................................................................................................................................................................................................................................................................................2111.0010100000000
..........................................................................................................................................................................................................................................................................................................................GATTCGGTGGGGCCGCTGGCCTGGCTC......2711.0011000000000
.............................................................................................................................................................................................................................................................................................................................TCGGTGGGGCCGCTGGCCTGGCT.......2311.0010100000000
............................ACGCTGAAATCGCGTCGTCCTT.........................................................................................................................................................................................................................................................................................................2211.0010010000000
.......................................................................................................................................................................................................................................................................................................................................CGCTGGCCTGGCTCTGCT..1811.0010100000000
..................GGCAAGAAACACGCTGAAATCGCGTA...............................................................................................................................................................................................................................................................................................................2611.0010100000000
................................................................................................................................................................................................................................................................................................................TCTGGAGCTGGATTCGGTG........................1911.0010000000010
..............................................................................................................................................................................................................................................................................................................................CGGTGGGGCCGCTGGCCTGGCTCTG....2511.0010100000000
........................AAACACGCTGAAATCGCGTCGTCC...........................................................................................................................................................................................................................................................................................................2411.0010001000000
.......................................................................................................TAAGA-----------CTACTCGAATTCGGC.....................................................................................................................................................................................................................2011.0010000000001
......................................................................................................................................................................................................................................................................................................................GCTGGATTCGGTGGGGCCGCTG...............2211.0010100000000
......................................................................................................................................................................................................................................................................................................................GCTGGATTCGGTGGGGCCGCTGGCCT...........2611.0010001000000
.............................CGCTGAAATCGCGTCGTCCT..........................................................................................................................................................................................................................................................................................................2011.0010000001000
.............................CGCTGAAATCGCGTCGTCCTTC........................................................................................................................................................................................................................................................................................................2211.0010000010000
.......................................................................................................................................................................................................................................................................................................................CTGGATTCGGTGGGGCCGCTGGCCT...........2511.0010000001000
..................................................................................................................................................................................................................................................................................................................TGGAGCTGGATTCGGTGGGG.....................2011.0010100000000
..TTTCCGCATCCCATTTGGCAAGAAACA..............................................................................................................................................................................................................................................................................................................................2711.0010001000000
........................................................................................................................................................................................................................................................................................................................TGGATTCGGTGGGGCCGCTG...............2011.0010000000100
.............................................................................................................................................................................................................................................................................................................CGCTCTGGAGCTGGATTCGGTGGGG.....................2511.0011000000000
.......GCATCCCATTTGGCAAGAAACA..............................................................................................................................................................................................................................................................................................................................2211.0010100000000
...TTCCGCATCCCATTTGGCAA....................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.............................................................................................................................................................................................................................................................................................................................TCGGTGGGGCCGCTGGCCTGGCTCTGCC..2811.0010001000000
.................................................................................................................................................................................................................................................................................................................CTGGAGCTGGATTCGGTGGGGCC...................2311.0010000010000
...................................................................................................................................................................................................................................................................................................................................GGGCCGCTGGCCTGGCTCTGCT..2211.0010100000000
..TTTCCGCATCCCATTTGGCAAGAAACACG............................................................................................................................................................................................................................................................................................................................2911.0010010000000
..........TCCCATTTGGCAAGAAACA..............................................................................................................................................................................................................................................................................................................................1911.0010100000000
.......................GAAACACGCTGAAATCGCGTCGTCC...........................................................................................................................................................................................................................................................................................................2511.0010100000000
.......GCATCCCATTTGGCAAGAA.................................................................................................................................................................................................................................................................................................................................1911.0010100000000
............................................................................................................................................................................................................................................................................................................................TTCGGTGGGGCCGCTGGCCTGGCT.......2411.0010100000000
.....................................................................................................................................................................................................................................................................................................................................GCCGCTGGCCTGGCTCTGCTGT2211.0010100000000
..........................ACACGCTGAAATCGCGTCGTC............................................................................................................................................................................................................................................................................................................2111.0010100000000
.CTTTCCGCATCCCATTTGGCAAGAAA................................................................................................................................................................................................................................................................................................................................2611.0010100000000
GCTTTCCGCATCCCATTTGGCA.....................................................................................................................................................................................................................................................................................................................................2211.0010010000000
.........................................................................................................................................................................................................................................................................................................................GGATTCGGTGGGGCCGCTGGCC............2211.0010100000000
........................................................................................................................................................................................................................................................................................................................TGGATTCGGTGGGGCCGCTGGCCT...........2411.0010100000000
...TTCCGCATCCCATTTGGCAAGA..................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.................TGGCAAGAAACACGCTGAAATC....................................................................................................................................................................................................................................................................................................................2211.0010100000000
...........................CACGCTGAAATCGCGTCGTCCT..........................................................................................................................................................................................................................................................................................................2211.0010100000000
....................................................................................................................................................................................................................................................................................................................GAGCTGGATTCGGTGGGGC....................1911.0010100000000
...............TTTGGCAAGAAACACGCTGAAAT.....................................................................................................................................................................................................................................................................................................................2311.0010100000000
..................................................................................................................................................................................................................................................................................................................TGGAGCTGGATTCGGTGGG......................1911.0010000000010
............................................................................................................................................................................................................................................................................................................................TTCGGTGGGGCCGCTGGCCTGG.........2211.0010100000000
............................................................................................................................................................................................................................................................................................................................TTCGGTGGGGCCGCTGGCCTG..........2111.0010100000000
.CTTTCCGCATCCCATTTGGC......................................................................................................................................................................................................................................................................................................................................2011.0010100000000
........................................................................................................................................................................................................................................................................................................................TGGATTCGGTGGGGCCGCTGGCCTA..........2511.0010100000000
...............TTTGGCAAGAAACACGCTGAAATCGCGT................................................................................................................................................................................................................................................................................................................2811.0010001000000
......................................................................................................ATAAGA-----------CTACTCGAATTCGGC.....................................................................................................................................................................................................................2111.0010000000001
........................................................................................................................................................................................................................................................................................................................TGGATTCGGTGGGGCCGCTGGCCTGGC........2711.0010100000000
...............TTTGGCAAGAAACACGCT..........................................................................................................................................................................................................................................................................................................................1811.0010000010000
.................TGGCAAGAAACACGCTGAAATCGCGT................................................................................................................................................................................................................................................................................................................2611.0010100000000
................................TGAAATCGCGTCGTCCTTCGC......................................................................................................................................................................................................................................................................................................2120.5010100000000
droPer2
GCTTTCCGCATCCCATTTGGCAAGAAACACGCTGAAATCGCGTCGTCCTTGTAAGTA---------------AATG--ATGACATCCTG--GTCGGATCATCATAAGA-----------CTACTCGAATTCGGCC---------------------------------CAA----T-----GTGCA--------CAC--AC-AGGCACATTGCATAATC--GTG-CAGA-----------T-T-------------CAAT--A---ACA-ATGT-TGTTTTCCCAATTTC-TTTAAGCGCTCGCTCTGGAGCTGGATTCGGTGGGGCCGCTGGCCTGGCTCTGCTGTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................................................................................................................CCGCTGGCCTGGCTCTGC...1814.004400000
.............................................................................................................................................................................................................................................................................................................CGCTCTGGAGCTGGATTCGGTGGGGC....................2613.003300000
..............ATTTGGCAAGAAACACGCTG.........................................................................................................................................................................................................................................................................................................................2012.002200000
..........................................................................................................................................................................................................................................................................................................................GATTCGGTGGGGCCGCTGGCCTGGCTCT.....2812.002200000
....................................................................................................................................................................................................................................................................................................................................GGCCGCTGGCCTGGCTCTGCT..2112.002200000
......................................................................................................................................................................................................................................................................................................................GCTGGATTCGGTGGGGCC...................1812.002000002
...................................................................................................................................................................................................................................................................................................................GGAGCTGGATTCGGTGGG......................1812.002000002
.................................................................................................................................................................................................................................................................................................................................TGGGGCCGCTGGCCTGGCTCTG....2211.001010000
.........................AACACGCTGAAATCGCGTCGTCC...........................................................................................................................................................................................................................................................................................................2311.001010000
......................................................................................................................................................................................................................................................................................................................GCTGGATTCGGTGGGGCCGCTGGCCTG..........2711.001000001
........................................................................................................................................................................................................................................................................................................................TGGATTCGGTGGGGCCGCTGGCC............2311.001000001
.............................................................................................................................................................................................................................................................................................................................TCGGTGGGGCCGCTGGCCTGGCTCT.....2511.001100000
........................................................................................................................................................................................................................................................................................................................TGGATTCGGTGGGGCCGCTGGCCTGG.........2611.001000001
.............................CGCTGAAATCGCGTCGTCC...........................................................................................................................................................................................................................................................................................................1911.001010000
...........................................................................................................................................................................................................................................................................................................................ATTCGGTGGGGCCGCTGGCCTGGCTCT.....2711.001100000
.........................................................................................................................................................................................................................................................................................................................GGATTCGGTGGGGCCGCTG...............1911.001010000
.......................................................................................................................................................................................................................................................................................................................................CGCTGGCCTGGCTCTGCT..1811.001100000
......................................................................................................................................................................................................................................................................................................................................CCGCTGGCCTGGCTCTGCTG.2011.001100000
..........................................................................................................................................................................................................................................................................................................................GATTCGGTGGGGCCGCTG...............1811.001010000
.............................................................................................................................................................................................................................................................................................................CGCTCTGGAGCTGGATTCGGTGG.......................2311.001001000
........................................................................................................................................................................................................................................................................................................................TGGATTCGGTGGGGCCGCTGGCCTG..........2511.001010000
..............ATTTGGCAAGAAACACGCTGAA.......................................................................................................................................................................................................................................................................................................................2211.001010000
.................TGGCAAGAAACACGCTGAAATCGCGT................................................................................................................................................................................................................................................................................................................2611.001010000
......................................................................................................................................................................................................................................................................................................................GCTGGATTCGGTGGGGCCGCT................2111.001010000
..TTTCCGCATCCCATTTGGCAA....................................................................................................................................................................................................................................................................................................................................2111.001010000
droWil2
GCTTTCCGTATCCCATTTGGCAAGAAGCACGCTGAAATAGCGACGTCCTTGTAAGTTGCCTGATTTGGCGCAAATA--ATAACT---------------ATCTGGGCATCATCAGAATATTATT-----TGCCTCTT-------T--------------------------------------------------------CTTACATATTGCATAATC--AAG-----GTTTTTTAT-GC-T---------GA--TC----G---CTA-AC----T----TCTTTCACC-TTTTAGCATCCGCTCTGGTGCTGGCTTTGGAGGAGCTGCTGGTCTGGGCCTGCTTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................................................................................................................................CTGGTGCTGGCTTTGGAGGAGC....................2218.00800530
....................................................................................................................................................................................................................................................................................................................GTGCTGGCTTTGGAGGAGC....................1914.00400220
.................................................................................................................................................................................................................................................................................................................CTGGTGCTGGCTTTGGAGGA......................2014.00401210
....TCCGTATCCCATTTGGCAAGAAGCACGC...........................................................................................................................................................................................................................................................................................................................2813.00301110
.................................................................................................................................................................................................................................................................................................................CTGGTGCTGGCTTTGGAGGAGCTGCT................2613.00310200
......................AGAAGCACGCTGAAATAGC..................................................................................................................................................................................................................................................................................................................1912.00200020
........TATCCCATTTGGCAAGAAGCACGCT..........................................................................................................................................................................................................................................................................................................................2512.00202000
..............ATTTGGCAAGAAGCACGCT..........................................................................................................................................................................................................................................................................................................................1912.00200020
.....................................................................................................................................................................................................................................................................................................................................GCTGCTGGTCTGGGCCTG....1812.00200011
................................................................................................................................................................................................................................................................................................................................GAGGAGCTGCTGGTCTGGGC.......2012.00210010
...................................................................................................................................................................................................................................................................................................................GGTGCTGGCTTTGGAGGAGC....................2012.00200110
...................................................................................................................................................................................................................................................................................................................................GAGCTGCTGGTCTGGGCC......1811.00110000
.............................................................................................................................................................................................................................................................................................................................TTGGAGGAGCTGCTGGTC............1811.00100100
............................................................................................................................................................................................................................................................................................................................TTTGGAGGAGCTGCTGGTCTGG.........2211.00100010
....................................................................................................................................................................................................................................................................................................................................AGCTGCTGGTCTGGGCCTG....1911.00110000
.........ATCCCATTTGGCAAGAAGCACGCTGAAAT.....................................................................................................................................................................................................................................................................................................................2911.00100100
...................................................................................................................................................................................................................................................................................................................GGTGCTGGCTTTGGAGGAGCTG..................2211.00100100
.................TGGCAAGAAGCACGCTGAAAT.....................................................................................................................................................................................................................................................................................................................2111.00100100
................................................................................................................................................................................................................................................................................................................................GAGGAGCTGCTGGTCTGGGCCC.....2211.00110000
...............................CTGAAATAGCGACGTCCT..........................................................................................................................................................................................................................................................................................................1811.00100010
..........................................................................................................................................................................................................................................................................................................ATCCGCTCTGGTGCTGGCTTTGGAG........................2511.00100010
...........................CACGCTGAAATAGCGACGTCCTT.........................................................................................................................................................................................................................................................................................................2311.00100010
.............................................................................................................................................................................................................................................................................................................................TTGGAGGAGCTGCTGGTCTGGGCC......2411.00110000
.................................................................................................................................................................................................................................................................................................................................AGGAGCTGCTGGTCTGGGCCTGC...2311.00100100
.......GTATCCCATTTGGCAAGAAGC...............................................................................................................................................................................................................................................................................................................................2111.00100100
..............................................................................................................................................................................................................................................................................................................GCTCTGGTGCTGGCTTTGGAGGA......................2311.00100100
...............................................................................................................................................................................................................................................................................................................CTCTGGTGCTGGCTTTGGAGGAGC....................2411.00100100
......................................................................................................................................................................................................................................................................................................................GCTGGCTTTGGAGGAGCTGCTGGT.............2411.00100100
.....................................................................................................................................................................................................................................................................................................................TGCTGGCTTTGGAGGAGCTGCTGG..............2411.00101000
........TATCCCATTTGGCAAGAAGCACGCTGAAA......................................................................................................................................................................................................................................................................................................................2911.00101000
....................................................................................................................................................................................................................................................................................................................................AGCTGCTGGTCTGGGCCTGCTT.2211.00110000
...........................................................................................................................................................................................................................................................................................................................CTTTGGAGGAGCTGCTGGTCTGGG........2411.00100001
...................................................................................................................................................................................................................................................................................................................GGTGCTGGCTTTGGAGGAGCTGCT................2411.00100100
............................................................................................................................................................................................................................................................................................................................TTTGGAGGAGCTGCTGGTA............1911.00100100
.....................AAGAAGCACGCTGAAATAGCGACGTCC...........................................................................................................................................................................................................................................................................................................2711.00100100
..........TCCCATTTGGCAAGAAGCACGCTGAAA......................................................................................................................................................................................................................................................................................................................2711.00101000
..............ATTTGGCAAGAAGCACGCTGAA.......................................................................................................................................................................................................................................................................................................................2211.00101000
............................................................................................................................................................................................................................................................................................................................TTTGGAGGAGCTGCTGGTCTGGGCC......2511.00100001
................TTGGCAAGAAGCACGCTGAAATAGCGAC...............................................................................................................................................................................................................................................................................................................2811.00101000
.................TGGCAAGAAGCACGCTGA........................................................................................................................................................................................................................................................................................................................1811.00100010
.................................................................................................................................................................................................................................................................................................................................AGGAGCTGCTGGTCTGGGCCT.....2111.00101000
.....CCGTATCCCATTTGGCAAGA..................................................................................................................................................................................................................................................................................................................................2011.00100100
...........................................CGTCCTTGTAAGTTGCCTGA............................................................................................................................................................................................................................................................................................2011.00100001
.........ATCCCATTTGGCAAGAAG................................................................................................................................................................................................................................................................................................................................1811.00100010
.................TGGCAAGAAGCACGCTGAAATAGCGACG..............................................................................................................................................................................................................................................................................................................2811.00101000
.................................................................................................................................................................................................................................................................................................................CTGGTGCTGGCTTTGGAGGAGCTGCTG...............2711.00100100
................................................................................................................................................................................................................................................................................................................................GAGGAGCTGCTGGTCTGGGCC......2111.00110000
..................................................................................................................................................................................................................................................................................................................................GGAGCTGCTGGTCTGGGC.......1811.00100010
..............................................................................................................................................................................................................................................................................................................................TGGAGGAGCTGCTGGTCTGGGC.......2211.00101000
.............................................................................................................................................................................................................................................................................................................CGCTCTGGTGCTGGCTTTGGAG........................2211.00100010
..............................................................................................................................................................................................................................................................................................................GCTCTGGTGCTGGCTTTGGAGGAGCTG..................2711.00100010
...TTCCGTATCCCATTTGGCAAGAAGC...............................................................................................................................................................................................................................................................................................................................2511.00100010
.........ATCCCATTTGGCAAGAAGC...............................................................................................................................................................................................................................................................................................................................1911.00100010
................................................................................................................................................................................................................................................................................................................................GAGGAGCTGCTGGTCTGGGCCTG....2311.00110000
................................................................................................................................................................................................................................................................................................................TCTGGTGCTGGCTTTGGAGGA......................2111.00100010
........................AAGCACGCTGAAATAGCGACGTCCT..........................................................................................................................................................................................................................................................................................................2511.00100100
droVir3
GCTTTCCGCATACCCTTTGGCAAGAAGCACGCTGAAATCGCGTCAGCCTTGTAAGTA---------------GAAATAAAA---T----------------------------------------------AAATCA-------TGT----TTATGGTGCTGCTACAT--GTCTGGCAAGAGT--ATA---GCACTT--GCAAAACACGTTGCATAATC--CAAA---GG----TAACAAT-TC-ACACAAA--T-TT-AATATTTATT------CA----TTCTTTGCG-TTTCAGCGTCAGCTCCGGCGCAGGATTCGGAGGTGCCGCTGGCCTGGCCCTGCTCTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........ATACCCTTTGGCAAGAAGC...............................................................................................................................................................................................................................................................................................................................1914.004000100000001001001000000000000000000000000000000000000000000000
...............TTTGGCAAGAAGCACGCTGAA.......................................................................................................................................................................................................................................................................................................................2113.003000000000000000001000100000000000000100000000000000000000000000
.................TGGCAAGAAGCACGCTGAAATCGCGTC...............................................................................................................................................................................................................................................................................................................2712.002000000000000000000000000001010000000000000000000000000000000000
.................TGGCAAGAAGCACGCTGAAATCGCGTCA..............................................................................................................................................................................................................................................................................................................2812.002000000000000000000000000001100000000000000000000000000000000000
..........................................................................................................................................................................................TA---GCACTT--GCAAAACACGTTG.......................................................................................................................................2112.002001000000000000000000000000001000000000000000000000000000000000
.........ATACCCTTTGGCAAGAAGCACGCT..........................................................................................................................................................................................................................................................................................................................2412.002001000000000000000100000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GCTCCGGCGCAGGATTCGGAGGTGCCGCT................2912.002000000000000000100000000000000000000000000000000000000000000001
.......GCATACCCTTTGGCAAGA..................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000001000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................GGCGCAGGATTCGGAGGTGC....................2011.001000000010000000000000000000000000000000000000000000000000000000
..........TACCCTTTGGCAAGAAGCA..............................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
.....CCGCATACCCTTTGGCAAG...................................................................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
....................CAAGAAGCACGCTGAAATCGCGT................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................GGATTCGGAGGTGCCGCTGGCC............2211.001010000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................ATTCGGAGGTGCCGCTGGCCTGGCCC......2611.001000100000000000000000000000000000000000000000000000000000000000
................TTGGCAAGAAGCACGCTGAAA......................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000100000000000000000000000000000000000000000
.........ATACCCTTTGGCAAGAAGCAC.............................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GATTCGGAGGTGCCGCTGGCCTGGC........2511.001000100000000000000000000000000000000000000000000000000000000000
..............CTTTGGCAAGAAGCACGCTG.........................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..............CTTTGGCAAGAAGCACGCTGA........................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................................................................CGTCAGCTCCGGCGCAGGA...............................1911.001000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................CTCCGGCGCAGGATTCGGA.........................1911.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................CCGGCGCAGGATTCGGAG........................1811.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................CTCCGGCGCAGGATTCGGAGGT......................2211.001000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TGCCGCTGGCCTGGCCCTGC...2011.001000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GCTCCGGCGCAGGATTCGGAGGTGCCGCTG...............3011.001000000000000000000000000000000000000000000000000000000000000010
.....CCGCATACCCTTTGGCAAGAAGC...............................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
...........ACCCTTTGGCAAGAAGCACGCTGAAATC....................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................TCGGAGGTGCCGCTGGCCTGGCCCTGCTC.2911.001000000000000000000000010000000000000000000000000000000000000000
...............TTTGGCAAGAAGCACGCTGAAATCGCG.................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000100000000000000000000000000000000000
..TTTCCGCATACCCTTTGGCAAG...................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
..............CTTTGGCAAGAAGCACGCTGAA.......................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...........ACCCTTTGGCAAGAAGCACGC...........................................................................................................................................................................................................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................CTGGCAAGAGT--ATA---GCACTT--G...................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000100
...........................................................................................................................................................................................................................................................................................................................ATTCGGAGGTGCCGCTGGCCTGGCCCT.....2711.001100000000000000000000000000000000000000000000000000000000000000
.........ATACCCTTTGGCAAGAAGCA..............................................................................................................................................................................................................................................................................................................................2011.001000000000100000000000000000000000000000000000000000000000000000
............................................................................................................................................................................CTGGCAAGAGT--ATA---GCACTT--....................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..TTTCCGCATACCCTTTGGC......................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
..TTTCCGCATACCCTTTGGCAAGA..................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000010000000000000000000000000000000000000000000
..........................GCACGCTGAAATCGCGTCAGCC...........................................................................................................................................................................................................................................................................................................2211.001000000000000000000000100000000000000000000000000000000000000000
.................TGGCAAGAAGCACGCTGAAATCGC..................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000010000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GCTCCGGCGCAGGATTCGGA.........................2011.001000000000000000100000000000000000000000000000000000000000000000
..............CTTTGGCAAGAAGCACGCT..........................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
......................AGAAGCACGCTGAAATCGC..................................................................................................................................................................................................................................................................................................................1911.001000000000000000000010000000000000000000000000000000000000000000
................TTGGCAAGAAGCACGCTGAA.......................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................GCGCAGGATTCGGAGGTGCC...................2011.001000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................GGTGCCGCTGGCCTGGCCCTGC...2211.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
GCTTTCCGTATACCTTTTGGCAAGAAACACGCTGAAATCGCATCATCCTTGTAAGTA---------------TCAATAAT-----------------------------------------------GTTTAAACAA-------TGTTAATGCATTT-------ATATTAAACAGGAAAGAGAGAA--------CAT--GC-AACCACATTGCATAACC--AATA---AT----CATCAAA-TC-AGACAAT--T-CT-AACATTAATA-AT----GTTACCATTTATAT-TTTTAGCGTACGGTCTGGCGCAGGTTTCGGTGGTGCCGCTGGCTTGGCCTTGCTCTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........ATACCTTTTGGCAAGAAACACGCTGAA.......................................................................................................................................................................................................................................................................................................................2712.002100001
.........................AACACGCTGAAATCGCATCATCCT..........................................................................................................................................................................................................................................................................................................2411.001100000
.......................GAAACACGCTGAAATCGCATCA..............................................................................................................................................................................................................................................................................................................2211.001100000
............................................................................................................................................................T-------ATATTAAACAGGAAAGAGAGA..................................................................................................................................................................2211.001100000
.............................................................................................................................................................................................................................................................................................................................TCGGTGGTGCCGCTGGCTTGGCCTT.....2511.001100000
.......................................................................................................................................................................................................................................................................................................................................CGCTGGCTTGGCCTTGCTC.1911.001100000
......................AGAAACACGCTGAAATCGCATC...............................................................................................................................................................................................................................................................................................................2211.001100000
...........................CACGCTGAAATCGCATCATCC...........................................................................................................................................................................................................................................................................................................2111.001100000
.................................................................................................................................................................................................................................................................................................................................TGGTGCCGCTGGCTTGGCCTTGCT..2411.001100000
....................CAAGAAACACGCTGAAATCGCATCA..............................................................................................................................................................................................................................................................................................................2511.001100000
.................TGGCAAGAAACACGCTGAAATCGCA.................................................................................................................................................................................................................................................................................................................2511.001100000
.......................................................................................................................................................GCATTT-------ATATTAAACAGGAAAGAGAG...................................................................................................................................................................2611.001010000
droGri2
GCTTTTCGCATACCTTTTGGCAAGAAGCACGCGGAAATCGCGACATCCTTGTTAGTA---------------ATATTAAAG---T----------------------------------------------GGCACT-------TGT----GCATATAAGAACTACTG--TTTTGATAGAAAT--GGAAG-CCACTC--GC-ATATCCATTGCATAATC--AAAA---CT----TGATGAA-TA-TTGCAAA--TTTT-AACT---TTT-CT-TCCA----TTTTGTTTG-TTGTAGCGTGCGCTCTGGTGCAGGATTCGGTGGCGCCGCTGGCCTGGCTCTGCTCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
GCTTTTCGCATACCTTTTG........................................................................................................................................................................................................................................................................................................................................1911.00110
..........................................................................................................................................................................................................................................................................................................................GATTCGGTGGCGCCGCTG...............1811.00110
...................................................................................................................................................................................................................................................................................................................GGTGCAGGATTCGGTGGCGCC...................2111.00101
................TTGGCAAGAAGCACGCGGAAATC....................................................................................................................................................................................................................................................................................................................2311.00110
.........ATACCTTTTGGCAAGAAGCAC.............................................................................................................................................................................................................................................................................................................................2111.00110

Generated: 05/18/2015 at 05:16 PM