ID:

dsi_6468

 Coordinate:

node_72290:7099-7248 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.2 -13.1 -13.0

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

ACTCCGGAAGTTATATGTGCCAAGTAAATACAGATCCTATGAAGAGCCTTGTAAGTGCATCTTAGCATACCGTTATAAAAATTAACAAAAACATTACTCAATCAAACAAACGCACTTCTGAAAGATACATTCAGCAGGTTAATTCAAATAATTAGTCTGCTAAAGTATTTAAGATTGTGATGTCATTAGGGTTTTGTGATTATGCTGACCTACGTGATTTCCTTCAAACTCTTGTTTTAAACAGATTTGA
*************************************************************************************************...................(((...((((((.((.((((((((((((.....)))))))))))).)))))))).)))**************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 M053
female body
...............TGTGCCAAGTAAATACAGATCCTATGA................................................................................................................................................................................................................ 27 0 1 20.00 20 14 2 0 4 0 0 0
..........................................................................................................................................................................................................................TTCCTTCAAACTCTTGTTTTAAACAGA..... 27 0 1 19.00 19 3 0 7 9 0 0 0
....................................................................................................................................................TAATTAGTCTGCTAAAGTATTTAAGA............................................................................ 26 0 1 14.00 14 1 8 4 1 0 0 0
................................................................................................................................................................TAAAGTATTTAAGATTGTGATGTCATT............................................................... 27 0 1 10.00 10 4 5 0 1 0 0 0
.................................................................................................TCAATCAAACAAACGCACTTCTGAAAGA............................................................................................................................. 28 0 1 10.00 10 5 5 0 0 0 0 0
.................................................TGTAAGTGCATCTTAGCATACCGTTATA............................................................................................................................................................................. 28 0 1 8.00 8 1 3 4 0 0 0 0
.........................................................................................................................................................................................................................TTTCCTTCAAACTCTTGTTTTAAACAGA..... 28 0 1 8.00 8 2 2 2 1 0 0 1
................................................................................................................................................................TAAAGTATTTAAGATTGTGATGTCAT................................................................ 26 0 1 6.00 6 1 4 0 1 0 0 0
..............................................................................................TACTCAATCAAACAAACGCACTTCTGA................................................................................................................................. 27 0 1 6.00 6 1 5 0 0 0 0 0
...........................................................................................................................................................................................................................TCCTTCAAACTCTTGTTTTAAACAGA..... 26 0 1 5.00 5 2 1 0 2 0 0 0
..TCCGGAAGTTATATGTGCCAAGTAAA.............................................................................................................................................................................................................................. 26 0 1 5.00 5 2 0 1 2 0 0 0
...............................................................................................ACTCAATCAAACAAACGCACTTCTGA................................................................................................................................. 26 0 1 5.00 5 3 0 1 1 0 0 0
........................................................................................................................................................TAGTCTGCTAAAGTATTTAAGATTGTGA...................................................................... 28 0 1 4.00 4 3 1 0 0 0 0 0
.................................................TGTAAGTGCATCTTAGCATACCGTTA............................................................................................................................................................................... 26 0 1 4.00 4 0 2 1 0 1 0 0
.....................................................................................................TCAAACAAACGCACTTCTGAAAGATACA......................................................................................................................... 28 0 1 4.00 4 1 1 1 1 0 0 0
.............................................................................................................................................................TGCTAAAGTATTTAAGATTGTGATGTCA................................................................. 28 0 1 4.00 4 1 1 2 0 0 0 0
.......................................TGAAGAGCCTTGTAAGTGCATCTTAGCA....................................................................................................................................................................................... 28 0 1 3.00 3 0 0 0 0 3 0 0
.......................................................................................................................................................................TTTAAGATTGTGATGTCATTAGGGT.......................................................... 25 0 1 3.00 3 2 0 0 1 0 0 0
.....................................TATGAAGAGCCTTGTAAGTGCATCTT........................................................................................................................................................................................... 26 0 1 3.00 3 0 0 0 0 3 0 0
.............................................................................................................................................................TGCTAAAGTATTTAAGATTGTGATGTCATT............................................................... 30 0 1 3.00 3 3 0 0 0 0 0 0
................................................................................................................................................................................................TTTGTGATTATGCTGACCTACGTGAT................................ 26 0 1 3.00 3 3 0 0 0 0 0 0
.............................................................................................TTACTCAATCAAACAAACGCACTTCTGA................................................................................................................................. 28 0 1 3.00 3 2 1 0 0 0 0 0
..................................TCCTATGAAGAGCCTTGTAAGTGCA............................................................................................................................................................................................... 25 0 1 3.00 3 1 0 0 0 2 0 0
.............................................................................................................................................................TGCTAAAGTATTTAAGATTGTGA...................................................................... 23 0 1 3.00 3 2 1 0 0 0 0 0
............................TACAGATCCTATGAAGAGCCTTGTAAG................................................................................................................................................................................................... 27 0 1 3.00 3 0 0 1 0 2 0 0
...................................................................................................AATCAAACAAACGCACTTCTGAAAGA............................................................................................................................. 26 0 1 2.00 2 0 1 0 1 0 0 0
..................................................................................................................................................................AAGTATTTAAGATTGTGATGTCATT............................................................... 25 0 1 2.00 2 0 2 0 0 0 0 0
.......................................TGAAGAGCCTTGTAAGTGCATCTTA.......................................................................................................................................................................................... 25 0 1 2.00 2 0 0 0 0 2 0 0
........................TAAATACAGATCCTATGAAGAGCCT......................................................................................................................................................................................................... 25 0 1 2.00 2 1 0 0 0 1 0 0
.......................................................TGCATCTTAGCATACCGTTATAAAAATT....................................................................................................................................................................... 28 0 1 2.00 2 0 0 2 0 0 0 0
................................................................................................................................................................................................TTTGTGATTATGCTGACCTACGTGA................................. 25 0 1 2.00 2 0 2 0 0 0 0 0
...................................................TAAGTGCATCTTAGCATACCGTTATA............................................................................................................................................................................. 26 0 1 2.00 2 2 0 0 0 0 0 0
........AGTTATATGTGCCAAGTAAATACAGA........................................................................................................................................................................................................................ 26 0 1 2.00 2 0 0 0 0 2 0 0
................................................TTGTAAGTGCATCTTAGCATACCGTTA............................................................................................................................................................................... 27 0 1 2.00 2 1 1 0 0 0 0 0
...............................................................................................................................................................................TGTGATGTCATTAGGGTTTTGTGATTA................................................ 27 0 1 2.00 2 1 1 0 0 0 0 0
..................................................................................................................................................................................................TGTGATTATGCTGACCTACGTGATT............................... 25 0 1 2.00 2 0 1 0 1 0 0 0
.........................................................................................................................................................................TAAGATTGTGATGTCATTAGGGT.......................................................... 23 0 1 2.00 2 1 0 0 0 1 0 0
.......................................................................................................................................................................TTTAAGATTGTGATGTCATTAGGGTTTTG...................................................... 29 0 1 2.00 2 2 0 0 0 0 0 0
.........................................................................................................................................................................TAAGATTGTGATGTCATTAGGGTTT........................................................ 25 0 1 2.00 2 0 0 2 0 0 0 0
..............................................................................................TACTCAATCAAACAAACGCACTTCTGAAAGA............................................................................................................................. 31 0 1 2.00 2 1 0 0 1 0 0 0
....................CAAGTAAATACAGATCCTATGA................................................................................................................................................................................................................ 22 0 1 2.00 2 1 1 0 0 0 0 0
..............................................................................................................................................................................TTGTGATGTCATTAGGGTTTTGTGA................................................... 25 0 1 2.00 2 1 0 1 0 0 0 0
....................................................................................................ATCAAACAAACGCACTTCTGAAAGA............................................................................................................................. 25 0 1 2.00 2 1 0 1 0 0 0 0
.............................................................................................................................................................................................................TGACCTACGTGATTTCCTTCAAACTCT.................. 27 0 1 2.00 2 0 0 0 0 0 1 1
.............................................................................................................................................................TGCTAAAGTATTTAAGATTGTGATGTCAT................................................................ 29 0 1 2.00 2 1 1 0 0 0 0 0
.......................................................TGCATCTTAGCATACCGTTATAAAAA......................................................................................................................................................................... 26 0 1 2.00 2 0 2 0 0 0 0 0
.....................................................................................................TCAAACAAACGCACTTCTGAAAGAT............................................................................................................................ 25 0 1 2.00 2 0 0 0 1 0 1 0
........................TAAATACAGATCCTATGAAGAGCC.......................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0
...............................................................................................................................................................................TGTGATGTCATTAGGGTTTTGTGA................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................................................................................TATTTAAGATTGTGATGTCATTAGGGT.......................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0
..........................................................................................................................................................................................TAGGGTTTTGTGATTATGCTGA.......................................... 22 0 1 1.00 1 0 0 0 0 1 0 0
...............................................................................................................................................................................TGTGATGTTATTAGGGTTTTGTGATTA................................................ 27 1 1 1.00 1 0 1 0 0 0 0 0
..................................................................................................................................................AATAATTAGTCTGCTAAAGTATTTAAGA............................................................................ 28 0 1 1.00 1 0 1 0 0 0 0 0
.........................................................................................................................................................................................................................GTTCCTTCAAACTCTTGTTTTAAACAGA..... 28 1 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................................................................TTAGTCTGCTAAAGTA................................................................................... 16 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................................................................TCTGCTAAAGTATTTAAGATTGTGA...................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0
.......................................................TGCATCTTAGCATACCGTTATAAAA.......................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................................................................................TGCTAAAGTATATAAGATTGTGATGTCATT............................................................... 30 1 1 1.00 1 1 0 0 0 0 0 0
........................TAAATACAGATCCTATGAAAA............................................................................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0
..............................CAGATCCTATGAAGAGCCTTGTAAGTGC................................................................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0
....CGGAAGTTATATGTGCCAAGTAAATACA.......................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0
.................TGCCAAGTAAATACAGATCCTATG................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0
............................................................................................................................................................CTGCTAAAGTATTTAAGATTGTGAT..................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0
................................................TTGTAAGTGCATCTTAGCATACCGTTAA.............................................................................................................................................................................. 28 1 1 1.00 1 0 1 0 0 0 0 0
...............................................................................................................................................................................TGTGATGTCATTAGGGTTTTGTGAT.................................................. 25 0 1 1.00 1 0 0 0 0 1 0 0
.......................................................................................................................................................TTAGTCTGCTAAAGTATTTAAGATTGTGA...................................................................... 29 0 1 1.00 1 0 0 1 0 0 0 0
..................................................................................................................................................................................................TGTGATTATGCTGACCTACGTGAT................................ 24 0 1 1.00 1 0 1 0 0 0 0 0
.......................................TGAAGAGCCTTGTAAGTGCATCTTAGC........................................................................................................................................................................................ 27 0 1 1.00 1 0 0 0 0 1 0 0
................................................................................................................................................................TAAAGTATTTAAGATTGTGA...................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0
.................................................TGTAAGTGCATCTTAGCATACCGTT................................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0
................................................................................................................................................................................................TTTGTGATTATGCTGACCTACGTG.................................. 24 0 1 1.00 1 0 1 0 0 0 0 0
..............................................................................................................................................................................TTGTGATGTCATTAGGGTTTTGT..................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0
..................................................................................................................................................................................................TGTGATTATGCTGAC......................................... 15 0 1 1.00 1 0 0 0 0 1 0 0
.............................................................................................................................TACATTCAGCAGGTTAATTCAAATAA................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0
.....................................TATGAAGAGCCTTGTAAGTGCATCT............................................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0
...............................................................................................................................................................CTAAAGTATTTAAGATTGTGA...................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0
.................................................TGTAAGTGCATCTTAGCATACCGTTT............................................................................................................................................................................... 26 1 1 1.00 1 0 0 0 1 0 0 0
.................TGCCAAGTAAATACAGATCCTATGAA............................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................................................................................TTGTGATGTCATTAGGGTTTTGTGAA.................................................. 26 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................................................TGTCATTAGGGTTTTGTGATTATGC............................................. 25 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................................................................................TGCTAAAGTATTTAAGATTGTGATG.................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0
.............TATGTGCCAAGTAAATACAGATCCTATGA................................................................................................................................................................................................................ 29 0 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................................................................................................................................TGACCTACGTGATTTCCTTCAAACTC................... 26 0 1 1.00 1 0 0 0 0 0 1 0
.................................................................................................................................................AAATAATTAGTCTGCTAAAGTATT................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0
........................................................................................................................................................................TTAAGATTGTGATGTCATTAGGGTTT........................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0
........................TAAATACAGATCCTATGAAGAGA........................................................................................................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0 0
................................................TTGTAAGTGCATCTTAGCATACCGTT................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0
.......................................................................................................................................................................TTTAAGATTGTGATGTC.................................................................. 17 0 1 1.00 1 0 0 0 0 1 0 0
...............................................................................................................................................................................................TTTTGTGATTATGCTGACCTACGTGAT................................ 27 0 1 1.00 1 1 0 0 0 0 0 0
......................................................................................................................................................................ATTTAAGATTGTGATGTCATTAGGG........................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0
........................................................................................................................................................................TTAAGATTATGATGTCATTAGGGTTT........................................................ 26 1 1 1.00 1 0 0 0 0 1 0 0
.....................................................................................................TCAAACAAACGCACTTCTGAAAG.............................................................................................................................. 23 0 1 1.00 1 0 0 1 0 0 0 0
................................................................................................................................................................TAAAGTATTTAAGATTGTGATGTCATA............................................................... 27 1 1 1.00 1 0 0 0 0 0 1 0
.....................................................................................................................................................................TATTTAAGATTGTGATGTCATTAGGG........................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0
.........................................................................................................................................................AGTCTGCTAAAGTATTTAAGATTGTGA...................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
..................................TCCTATGAAGAGCCTTGTAAGTGC................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 1 0 0 0 0
.............................................................................................................................................................TGCTAAAGTATTTAAGATTGTGAAAA................................................................... 26 3 1 1.00 1 0 1 0 0 0 0 0
................................................TTGTAAGTGCATCTTAGCATACCGTTATA............................................................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................TACTCAATCAAACAAACGCACTTCTG.................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0
..............................CAGATCCTATGAAGAGCCTTGTAAGTGCA............................................................................................................................................................................................... 29 0 1 1.00 1 0 0 1 0 0 0 0
..............................................................................................TACTCAATCAAAAAAACGCACTTCTGA................................................................................................................................. 27 1 1 1.00 1 0 1 0 0 0 0 0
..............................................................................................................CGCACTTCTGAAAGATACATTCAGCAGG................................................................................................................ 28 0 1 1.00 1 0 0 0 1 0 0 0
.................................................................................................................................................................................TGATGTCATTAGGGTTTTGTGATTA................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0
.......................................................................................................................................................................TTTAAGATTGTGACGTCATTAGGGTTT........................................................ 27 1 1 1.00 1 0 0 1 0 0 0 0
.........................................................................................AACATTACTCAATCAAACAAA............................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0
..........................AATACAGATCCTATGAAGAGCCTTG....................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0
..............................................................................................TACTCAATCAAACAAACGCACTTCTGAA................................................................................................................................ 28 0 1 1.00 1 0 1 0 0 0 0 0
......................................................................................................CAAACAAACGCACTTCTGAAAGATA........................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0
.........................................................................................................................................................................TAAGATTGTGATGTCATTAGGGTTTTGTGA................................................... 30 0 1 1.00 1 0 0 0 1 0 0 0
..............................................................................................................................................................................TTGTGATGTCATTAGGGTTTTGTGAT.................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0
.........................................................................................................................................................................................................................TTTCCTTCAAACTCTTGTTTTAAACA....... 26 0 1 1.00 1 0 1 0 0 0 0 0
..................................................GTAAGTGCATCTTAGCATACCGTTATA............................................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0
................GTGCCAAGTAAATACAGATCCTATGA................................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................TCTGAAAGATACATTCAGCAGGTTAA............................................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0
.............................................................................................................................................................TGCTAAAGTATTTAAGATTGTGATGT................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................TTTCCTTCAAACTCTTGTTTTAAACAG...... 27 0 1 1.00 1 0 0 1 0 0 0 0
...........................................................................................................................................................................................................................TCCTTCAAACTCTTGTT.............. 17 0 1 1.00 1 1 0 0 0 0 0 0
......................AGTAAATACAGATCCTATGAA............................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0
...........................................................................................................................................TAATTCAAATAATTAGTCTGCTAAAGTA................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0
.........................................................................................................................................................................TAAGATTGTGATGTCATTAGGGTTTTG...................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0
......................................................................................................................................................................................TCATTAGGGTTTTGTGATTATGCTGAC......................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
.............................................................................................................................................................TGCTAAAGTATTTAAGATTGT........................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................TCAAACAAACGCACTTCTGAAAGATAC.......................................................................................................................... 27 0 1 1.00 1 0 0 0 0 0 1 0
......................................................................................................................................................................................TCATTAGGGTTTTGTGATTATGCT............................................ 24 0 1 1.00 1 0 1 0 0 0 0 0
..................................................................................................................................TCAGCAGGTTAATTCAAATAATTA................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0 0
............................TACAGATCCTATGAAGAGCCTTG....................................................................................................................................................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0
...................................................................................................................................................................AGTATTTAAGATTGTGATGTCATT............................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0
..............................CAGATCCTATGAAGAGCCTTGTAAGTG................................................................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0
......................................................................................................CAAACAAACGCACTTCTGAAAGATAC.......................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 1 0
........................................................................................................................................................................TGAAGATTGTGATGTCATTAGGGT.......................................................... 24 1 1 1.00 1 0 0 0 0 1 0 0
..........................................................................................................................................................................................................................TTCCTTCAAACTCTTGTTTTAAACAGATT... 29 0 1 1.00 1 0 0 0 0 0 0 1
....................................................................................................................................................................................TGTCATTAGGGTTTTGTGATTATGCTGA.......................................... 28 0 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................................................................TTAATTCAAATAATTAGTCTGCTAAAGTA................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................TCAAACAAACGCACTTCTGAAAGA............................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................................................................................TTTAAGATTGTGATGTCATTAGGGTT......................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0
.....................................TATGAAGAGCCTTGTAAGTGCA............................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................................................................................TTAAGATTGTGATGTCATTAGGGT.......................................................... 24 0 1 1.00 1 0 0 0 0 1 0 0
..................................................................................................................................................CCTAATTAGTCTGCTAAA...................................................................................... 18 2 10 0.10 1 0 0 0 0 1 0 0
...........................................................................................................................................................TCTGCTGAACTATTGAAGAT........................................................................... 20 3 12 0.08 1 0 0 1 0 0 0 0
.........................................AAGAGCCTTGTATGTCGAT.............................................................................................................................................................................................. 19 3 19 0.05 1 0 0 0 0 1 0 0

Anti-sense strand reads

TGAGGCCTTCAATATACACGGTTCATTTATGTCTAGGATACTTCTCGGAACATTCACGTAGAATCGTATGGCAATATTTTTAATTGTTTTTGTAATGAGTTAGTTTGTTTGCGTGAAGACTTTCTATGTAAGTCGTCCAATTAAGTTTATTAATCAGACGATTTCATAAATTCTAACACTACAGTAATCCCAAAACACTAATACGACTGGATGCACTAAAGGAAGTTTGAGAACAAAATTTGTCTAAACT
****************************************************************************...................(((...((((((.((.((((((((((((.....)))))))))))).)))))))).)))************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR902008
ovaries
 M025
embryo
 M053
female body
 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR902009
testis
........................................................................................................................................................................................................ATACGACTGGATGCACTAAAGGAAGT........................ 26 0 1 3.00 3 2 1 0 0 0 0 0 0 0
............................................................................................................TTGCGTGAAGACTTTCTATGTAAGTCGT.................................................................................................................. 28 0 1 2.00 2 1 0 0 0 0 1 0 0 0
...............ACACGGTTCATTTATGTCTAGGATACTT............................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.................ACGGTTCATTTATGTCTAGGATACTT............................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................................................ATACGACTGGATGCACTAAAGGAAGTT....................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0
........................................................................................................................................CCAATTAAGTTTATTAATCAGACGAT........................................................................................ 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0
...............................................................................TTAATTGTTTTTGTAATG......................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.......................CGTTTATGTCGAGGATACT................................................................................................................................................................................................................ 19 2 5 0.40 2 0 0 2 0 0 0 0 0 0
....................................................................................................................................TGGTCCAATTAAGTTT...................................................................................................... 16 1 4 0.25 1 1 0 0 0 0 0 0 0 0
..........................................................................................TGTAAGGAGTTAGTTTGTA............................................................................................................................................. 19 2 5 0.20 1 0 0 0 0 0 0 1 0 0
...........................................................................................................................................................................................................CGACAGGCTGCACTAAA.............................. 17 2 15 0.07 1 0 0 0 0 0 0 0 1 0
...................................................................................................................AAGACTTTCTCCGCAAGTC.................................................................................................................... 19 3 19 0.05 1 1 0 0 0 0 0 0 0 0
...........................CATGTCTAGGTTACTT............................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 node_72290:7049-7298 - dsi_6468 ACTCCGGAAGTTATATGTGCCAAGTAAATACAGATCCTATGAAGAGCCTTGTAAGTGCATCT------------------------T----AGCATACCGTTATAAAAATTAACAAAAACATTA--CTCAATCAAACAAACGCACTTCTGAAAGATACATTCAGCAGGTTAATTC------------------------------------------------------AAATAATTAGTCTGCTAAAGTATTTAAGATTGTGATGTCATTAGGGTTTTGTGATT---ATGCTGACCTACGTGATTTCCTTCAAACTCTTGT-TTTAAACA-GATT-----------------TGA
droSec2 scaffold_61:167844-168093 - ACTCCGGAAGTTATATGTGCCAAGTAAATACAGATCCTATGAAGAGCCTTGTAAGTGCATCT------------------------T----AGCATACCGTTATAAAAATTAACAAAAACATTA--CTCAATCAAACAAACGCACTTCTGAAAGATACATTCAGCAGGTTAATTC------------------------------------------------------AAATAATTAGTCTGCTAAAGTATTTAAGATTGTGATGTCATTAGGGTTTTGTGATT---ATGCTAACCTACGTGATTTCCTTCAAACTCTTGT-TTTAAACA-GATT-----------------TGT
dm3 chrU:72400-72524 + ACTCCGGAAGTTATATGTGCCAAGTAAATACAGATCCGATGAAGAGCCTTGTAAGTGCATCT------------------------T----AACATACCGTTATAAAAAGTGACAAAAACAACAAAACCAACAAAACCAATCCAATTTTACAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4845:1247843-1248084 - ATTCCGGGAGTTATATGTGCCAAGTAAATACAGATCCTATGAAGAGCCTTGTAAGTGCATCA------------------------A---------ACCATTATAAAACGTAACAAAAACAGTA--TTCAAGCAAATAAAATCACCTCTCAAAGACACATTCA-------AATTCAATTAT-------TTTTTTGTATTCAAAATATTTATTATTAA----------------------------------------TTTTTTATATAAAATGGTTTT--TGATTCATATGCTGACC----TGAAGTTCCCCAATGTCGGGT-ATTGAAAA-AGTC-----------------TTG
droYak3 v2_chrUn_001:549533-549785 + ACTCCGGAAGTTATATGTGCCAAGTAAATACAGATCCTATGAAGAGCCTTGTAAGTGCATCT------------------------ACATATGTATACCATTATTAAATGTAAGAAAAACAGTA--TTCAAGCAAACAA-----CATCTGAAACCCACATTC-----GTTAATTA------------------------------------------------------AAAACTTTTAT--------TTATTTAAGTTTCCTATATTAAATAGTTTTTATGCTTCTCAT----TCCGACCTGAAGTTCTCCTATATCTGGT-TTAGAAAAAAAACTTGCGAGCGAATCATTGTGA
droEug1 scf7180000409608:16593-16654 + ACTCCGGCAGCTACATGTGCCAGATTAATACAGATCCTATGAAGAGCATTGTAAGTGCATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000296993:13685-13746 - ACTCCGGCAGCTACATGTGCCAAGTTAATACTGATCCTATGAAGAGCCTCGTAAGTGAATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415786:97126-97255 - ATTATTTA--------------------------------------------------------------------------------------------------------------------------ATCAAATAAAAACACCTCTTAACGAGGTAAA---------AAACTAGTGACGACCGCAACTTCAACATACAAAAGTTCTGATATCAACATTTGTGACGAAAAAT----------------------------------------GATT--ACACT----------------------------------CGTCATTAAATA-GACT-----------------T-T
droEle1 scf7180000490205:17731-17792 + ACTCCGGCAGCTACATGTGCCAAGTTAATACAGATCCCATGAAGAGCCTTGTAAGTGCATCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000770763:26207-26279 + A-----------------------------CAGATCCTATGAAAAGCCATGTAATCCT-TCTTCGAAGGACCGGATAAAAATAGCCA---------A-----------------CTACCCATTA--CTCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454072:3393088-3393197 + ATCGCGGTGGCTACATGTGCCAGCTCAACACGGATCCCATGAAGAGCCAGGTGAGTCGATTG-----------AATAAG--T----T----GCCTTGCCGT-----------GCAGAAACA--------AATCACGCATACGCACTGTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000298510:3121-3180 + ACTCCGGCAGTTACATGTGCCAAGTTAATACAGATCCCATGAAGAGCCTTGTAAGTGCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13230:3178222-3178276 - ATTCTGGAAGCTACATGTGTCAAGTTAATACAGACCCAATGAAAAGTCAGGTAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000395050:6708-6763 - ATTCTGGTAGCTACATGTGTCAAGTGAATACAGACCCAATGAAAAGCCAAGTAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 Unknown_group_221:17044-17103 + ACTCCGGCAGCTACATGTGCCAAGTGAATACGGATCCCATGAAGAGCCTTGTAAGTGCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_16:67074-67133 + ACTCCGGCAGCTACATGTGCCAAGTGAATACGGATCCCATGAAGAGCCTTGTAAGTGCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004909:1502599-1502667 + ATGCCGGCAAATACATGTGTCAGGTCAACACAGATCCCATGAAAATGCAAGTAAGTACAATT------------------------T----ACTATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12963:14049497-14049563 - ATTCTGGCAGCTACATGTGTCAAGTGAATACAGATCCCATGAAAAGTCTGGTAAGTCAACCA------------------------C----AGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:29591408-29591473 - ATTCTGGTAGCTACATGTGTCAAGTGAATACAGATCCCATGAAAAGTCTGGTAAGTCAACCA------------------------C----AGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15126:1798446-1798501 + ATTCTGGCAGCTACATGTGTCAAGTGAATACGGATCCCATGAAGAGTCTGGTAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACTCCGGAAGTTATATGTGCCAAGTAAATACAGATCCTATGAAGAGCCTTGTAAGTGCATCT------------------------T----AGCATACCGTTATAAAAATTAACAAAAACATTA--CTCAATCAAACAAACGCACTTCTGAAAGATACATTCAGCAGGTTAATTC------------------------------------------------------AAATAATTAGTCTGCTAAAGTATTTAAGATTGTGATGTCATTAGGGTTTTGTGATT---ATGCTGACCTACGTGATTTCCTTCAAACTCTTGT-TTTAAACA-GATT-----------------TGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............TGTGCCAAGTAAATACAGATCCTATGA..........................................................................................................................................................................................................................................................................................................................27120.0020000000414020000000
.................................................................................................................................................................................................................................................................................................................TTCCTTCAAACTCTTGT-TTTAAACA-GA......................27119.001900000093700000000
........................................................................................................................................................................................................................................TAATTAGTCTGCTAAAGTATTTAAGA..................................................................................................26114.001400000011480000000
....................................................................................................................................................................................................................................................TAAAGTATTTAAGATTGTGATGTCATT.....................................................................................27110.001000000014050000000
...............................................................................................................................TCAATCAAACAAACGCACTTCTGAAAGA.........................................................................................................................................................................................................28110.001000000005050000000
.................................................TGTAAGTGCATCT------------------------T----AGCATACCGTTATA...........................................................................................................................................................................................................................................................2818.00800000001430000000
................................................................................................................................................................................................................................................................................................................TTTCCTTCAAACTCTTGT-TTTAAACA-GA......................2818.00800010012220000000
....................................................................................................................................................................................................................................................TAAAGTATTTAAGATTGTGATGTCAT......................................................................................2616.00600000011040000000
..........................................................................................................................TA--CTCAATCAAACAAACGCACTTCTGA.............................................................................................................................................................................................................2716.00600000001050000000
..................................................................................................................................................................................................................................................................................................................TCCTTCAAACTCTTGT-TTTAAACA-GA......................2615.00500000022010000000
..TCCGGAAGTTATATGTGCCAAGTAAA........................................................................................................................................................................................................................................................................................................................................2615.00500000022100000000
...........................................................................................................................A--CTCAATCAAACAAACGCACTTCTGA.............................................................................................................................................................................................................2615.00500000013100000000
............................................................................................................................................................................................................................................TAGTCTGCTAAAGTATTTAAGATTGTGA............................................................................................2814.00400000003010000000
.................................................TGTAAGTGCATCT------------------------T----AGCATACCGTTA.............................................................................................................................................................................................................................................................2614.00400000000121000000
...................................................................................................................................TCAAACAAACGCACTTCTGAAAGATACA.....................................................................................................................................................................................................2814.00400000011110000000
.................................................................................................................................................................................................................................................TGCTAAAGTATTTAAGATTGTGATGTCA.......................................................................................2814.00400000001210000000
.......................................TGAAGAGCCTTGTAAGTGCATCT------------------------T----AGCA.....................................................................................................................................................................................................................................................................2813.00300000000003000000
...........................................................................................................................................................................................................................................................TTTAAGATTGTGATGTCATTAGGGT................................................................................2513.00300000012000000000
.....................................TATGAAGAGCCTTGTAAGTGCATCT------------------------T----.........................................................................................................................................................................................................................................................................2613.00300000000003000000
.................................................................................................................................................................................................................................................TGCTAAAGTATTTAAGATTGTGATGTCATT.....................................................................................3013.00300000003000000000
....................................................................................................................................................................................................................................................................................TTTGTGATT---ATGCTGACCTACGTGAT...................................................2613.00300000003000000000
.........................................................................................................................TTA--CTCAATCAAACAAACGCACTTCTGA.............................................................................................................................................................................................................2813.00300000002010000000
..................................TCCTATGAAGAGCCTTGTAAGTGCA.........................................................................................................................................................................................................................................................................................................2513.00300000001002000000
.................................................................................................................................................................................................................................................TGCTAAAGTATTTAAGATTGTGA............................................................................................2313.00300000002010000000
............................TACAGATCCTATGAAGAGCCTTGTAAG.............................................................................................................................................................................................................................................................................................................2713.00300000000102000000
.................................................................................................................................AATCAAACAAACGCACTTCTGAAAGA.........................................................................................................................................................................................................2612.00200000010010000000
......................................................................................................................................................................................................................................................AAGTATTTAAGATTGTGATGTCATT.....................................................................................2512.00200000000020000000
.......................................TGAAGAGCCTTGTAAGTGCATCT------------------------T----A........................................................................................................................................................................................................................................................................2512.00200000000002000000
........................TAAATACAGATCCTATGAAGAGCCT...................................................................................................................................................................................................................................................................................................................2512.00200000001001000000
.......................................................TGCATCT------------------------T----AGCATACCGTTATAAAAATT.....................................................................................................................................................................................................................................................2812.00200000000200000000
....................................................................................................................................................................................................................................................................................TTTGTGATT---ATGCTGACCTACGTGA....................................................2512.00200000000020000000
...................................................TAAGTGCATCT------------------------T----AGCATACCGTTATA...........................................................................................................................................................................................................................................................2612.00200000002000000000
........AGTTATATGTGCCAAGTAAATACAGA..................................................................................................................................................................................................................................................................................................................................2612.00200000000002000000
................................................TTGTAAGTGCATCT------------------------T----AGCATACCGTTA.............................................................................................................................................................................................................................................................2712.00200000001010000000
...................................................................................................................................................................................................................................................................TGTGATGTCATTAGGGTTTTGTGATT---A...................................................................2712.00200000001010000000
......................................................................................................................................................................................................................................................................................TGTGATT---ATGCTGACCTACGTGATT..................................................2512.00200000010010000000
.............................................................................................................................................................................................................................................................TAAGATTGTGATGTCATTAGGGT................................................................................2312.00200000001001000000
...........................................................................................................................................................................................................................................................TTTAAGATTGTGATGTCATTAGGGTTTTG............................................................................2912.00200000002000000000
.............................................................................................................................................................................................................................................................TAAGATTGTGATGTCATTAGGGTTT..............................................................................2512.00200000000200000000
..........................................................................................................................TA--CTCAATCAAACAAACGCACTTCTGAAAGA.........................................................................................................................................................................................................3112.00200000011000000000
....................CAAGTAAATACAGATCCTATGA..........................................................................................................................................................................................................................................................................................................................2212.00200000001010000000
..................................................................................................................................................................................................................................................................TTGTGATGTCATTAGGGTTTTGTGA.........................................................................2512.00200000001100000000
..................................................................................................................................ATCAAACAAACGCACTTCTGAAAGA.........................................................................................................................................................................................................2512.00200000001100000000
....................................................................................................................................................................................................................................................................................................TGACCTACGTGATTTCCTTCAAACTCT.....................................2712.00200010000000010000
.................................................................................................................................................................................................................................................TGCTAAAGTATTTAAGATTGTGATGTCAT......................................................................................2912.00200000001010000000
.......................................................TGCATCT------------------------T----AGCATACCGTTATAAAAA.......................................................................................................................................................................................................................................................2612.00200000000020000000
...................................................................................................................................TCAAACAAACGCACTTCTGAAAGAT........................................................................................................................................................................................................2512.00200000010000010000
........................TAAATACAGATCCTATGAAGAGCC....................................................................................................................................................................................................................................................................................................................2411.00100000000010000000
...................................................................................................................................................................................................................................................................TGTGATGTCATTAGGGTTTTGTGA.........................................................................2411.00100000001000000000
.........................................................................................................................................................................................................................................................TATTTAAGATTGTGATGTCATTAGGGT................................................................................2711.00100000000010000000
..............................................................................................................................................................................................................................................................................TAGGGTTTTGTGATT---ATGCTGA.............................................................2211.00100000000001000000
......................................................................................................................................................................................................................................AATAATTAGTCTGCTAAAGTATTTAAGA..................................................................................................2811.00100000000010000000
...........................................................................................................................................................................................................................................TTAGTCTGCTAAAGTA.........................................................................................................1611.00100000001000000000
...............................................................................................................................................................................................................................................TCTGCTAAAGTATTTAAGATTGTGA............................................................................................2511.00100000000100000000
.......................................................TGCATCT------------------------T----AGCATACCGTTATAAAA........................................................................................................................................................................................................................................................2511.00100000000010000000
..............................CAGATCCTATGAAGAGCCTTGTAAGTGC..........................................................................................................................................................................................................................................................................................................2811.00100000001000000000
....CGGAAGTTATATGTGCCAAGTAAATACA....................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
.................TGCCAAGTAAATACAGATCCTATG...........................................................................................................................................................................................................................................................................................................................2411.00100000001000000000
................................................................................................................................................................................................................................................CTGCTAAAGTATTTAAGATTGTGAT...........................................................................................2511.00100000000100000000
................................................TTGTAAGTGCATCT------------------------T----AGCATACCGTTAA............................................................................................................................................................................................................................................................2811.00100000000010000000
...................................................................................................................................................................................................................................................................TGTGATGTCATTAGGGTTTTGTGAT........................................................................2511.00100000000001000000
...........................................................................................................................................................................................................................................TTAGTCTGCTAAAGTATTTAAGATTGTGA............................................................................................2911.00100000000100000000
......................................................................................................................................................................................................................................................................................TGTGATT---ATGCTGACCTACGTGAT...................................................2411.00100000000010000000
.......................................TGAAGAGCCTTGTAAGTGCATCT------------------------T----AGC......................................................................................................................................................................................................................................................................2711.00100000000001000000
....................................................................................................................................................................................................................................................TAAAGTATTTAAGATTGTGA............................................................................................2011.00100000010000000000
.................................................TGTAAGTGCATCT------------------------T----AGCATACCGTT..............................................................................................................................................................................................................................................................2511.00100000000010000000
....................................................................................................................................................................................................................................................................................TTTGTGATT---ATGCTGACCTACGTG.....................................................2411.00100000000010000000
..................................................................................................................................................................................................................................................................TTGTGATGTCATTAGGGTTTTGT...........................................................................2311.00100000000100000000
......................................................................................................................................................................................................................................................................................TGTGATT---ATGCTGAC............................................................1511.00100000000001000000
...........................................................................................................................................................TACATTCAGCAGGTTAATTC------------------------------------------------------AAATAA.........................................................................................................................2611.00100000000010000000
.....................................TATGAAGAGCCTTGTAAGTGCATCT------------------------..............................................................................................................................................................................................................................................................................2511.00100000000010000000
...................................................................................................................................................................................................................................................CTAAAGTATTTAAGATTGTGA............................................................................................2111.00100000000010000000
.................................................TGTAAGTGCATCT------------------------T----AGCATACCGTTT.............................................................................................................................................................................................................................................................2611.00100000010000000000
.................TGCCAAGTAAATACAGATCCTATGAA.........................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
..................................................................................................................................................................................................................................................................TTGTGATGTCATTAGGGTTTTGTGAA........................................................................2611.00100000001000000000
........................................................................................................................................................................................................................................................................TGTCATTAGGGTTTTGTGATT---ATGC................................................................2511.00100000001000000000
.................................................................................................................................................................................................................................................TGCTAAAGTATTTAAGATTGTGATG..........................................................................................2511.00100000001000000000
.............TATGTGCCAAGTAAATACAGATCCTATGA..........................................................................................................................................................................................................................................................................................................................2911.00100000000010000000
....................................................................................................................................................................................................................................................................................................TGACCTACGTGATTTCCTTCAAACTC......................................2611.00100000000000010000
.....................................................................................................................................................................................................................................AAATAATTAGTCTGCTAAAGTATT.......................................................................................................2411.00100000000010000000
............................................................................................................................................................................................................................................................TTAAGATTGTGATGTCATTAGGGTTT..............................................................................2611.00100000000010000000
........................TAAATACAGATCCTATGAAGAGA.....................................................................................................................................................................................................................................................................................................................2311.00100000001000000000
................................................TTGTAAGTGCATCT------------------------T----AGCATACCGTT..............................................................................................................................................................................................................................................................2611.00100000000010000000
...........................................................................................................................................................................................................................................................TTTAAGATTGTGATGTC........................................................................................1711.00100000000001000000
...................................................................................................................................................................................................................................................................................TTTTGTGATT---ATGCTGACCTACGTGAT...................................................2711.00100000001000000000
..........................................................................................................................................................................................................................................................ATTTAAGATTGTGATGTCATTAGGG.................................................................................2511.00100000000010000000
...................................................................................................................................TCAAACAAACGCACTTCTGAAAG..........................................................................................................................................................................................................2311.00100000000100000000
....................................................................................................................................................................................................................................................TAAAGTATTTAAGATTGTGATGTCATA.....................................................................................2711.00100000000000010000
.........................................................................................................................................................................................................................................................TATTTAAGATTGTGATGTCATTAGGG.................................................................................2611.00100000010000000000
.............................................................................................................................................................................................................................................AGTCTGCTAAAGTATTTAAGATTGTGA............................................................................................2711.00100000001000000000
..................................TCCTATGAAGAGCCTTGTAAGTGC..........................................................................................................................................................................................................................................................................................................2411.00100000000100000000
.................................................................................................................................................................................................................................................TGCTAAAGTATTTAAGATTGTGAAAA.........................................................................................2611.00100000000010000000
................................................TTGTAAGTGCATCT------------------------T----AGCATACCGTTATA...........................................................................................................................................................................................................................................................2911.00100000001000000000
..........................................................................................................................TA--CTCAATCAAACAAACGCACTTCTG..............................................................................................................................................................................................................2611.00100000000010000000
..............................CAGATCCTATGAAGAGCCTTGTAAGTGCA.........................................................................................................................................................................................................................................................................................................2911.00100000000100000000
............................................................................................................................................CGCACTTCTGAAAGATACATTCAGCAGG............................................................................................................................................................................................2811.00100000010000000000
.....................................................................................................................................................................................................................................................................TGATGTCATTAGGGTTTTGTGATT---A...................................................................2511.00100000000010000000
.....................................................................................................................AACATTA--CTCAATCAAACAAA........................................................................................................................................................................................................................2111.00100000001000000000
..........................AATACAGATCCTATGAAGAGCCTTG.................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
..........................................................................................................................TA--CTCAATCAAACAAACGCACTTCTGAA............................................................................................................................................................................................................2811.00100000000010000000
....................................................................................................................................CAAACAAACGCACTTCTGAAAGATA.......................................................................................................................................................................................................2511.00100000000000010000
.............................................................................................................................................................................................................................................................TAAGATTGTGATGTCATTAGGGTTTTGTGA.........................................................................3011.00100000010000000000
..................................................................................................................................................................................................................................................................TTGTGATGTCATTAGGGTTTTGTGAT........................................................................2611.00100000000010000000
................................................................................................................................................................................................................................................................................................................TTTCCTTCAAACTCTTGT-TTTAAACA-........................2611.00100000000010000000
..................................................GTAAGTGCATCT------------------------T----AGCATACCGTTATA...........................................................................................................................................................................................................................................................2711.00100000000010000000
................GTGCCAAGTAAATACAGATCCTATGA..........................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
..................................................................................................................................................TCTGAAAGATACATTCAGCAGGTTAA........................................................................................................................................................................................2611.00100000000010000000
.................................................................................................................................................................................................................................................TGCTAAAGTATTTAAGATTGTGATGT.........................................................................................2611.00100000001000000000
................................................................................................................................................................................................................................................................................................................TTTCCTTCAAACTCTTGT-TTTAAACA-G.......................2711.00100000000100000000
..................................................................................................................................................................................................................................................................................................................TCCTTCAAACTCTTGT-T................................1711.00100000001000000000
......................AGTAAATACAGATCCTATGAA.........................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
.........................................................................................................................................................................TAATTC------------------------------------------------------AAATAATTAGTCTGCTAAAGTA.........................................................................................................2811.00100000000010000000
.............................................................................................................................................................................................................................................................TAAGATTGTGATGTCATTAGGGTTTTG............................................................................2711.00100000000100000000
..........................................................................................................................................................................................................................................................................TCATTAGGGTTTTGTGATT---ATGCTGAC............................................................2711.00100000001000000000
.................................................................................................................................................................................................................................................TGCTAAAGTATTTAAGATTGT..............................................................................................2111.00100000001000000000
...................................................................................................................................TCAAACAAACGCACTTCTGAAAGATAC......................................................................................................................................................................................................2711.00100000000000010000
..........................................................................................................................................................................................................................................................................TCATTAGGGTTTTGTGATT---ATGCT...............................................................2411.00100000000010000000
................................................................................................................................................................TCAGCAGGTTAATTC------------------------------------------------------AAATAATTA......................................................................................................................2411.00100000000010000000
............................TACAGATCCTATGAAGAGCCTTG.................................................................................................................................................................................................................................................................................................................2311.00100000010000000000
.......................................................................................................................................................................................................................................................AGTATTTAAGATTGTGATGTCATT.....................................................................................2411.00100000001000000000
..............................CAGATCCTATGAAGAGCCTTGTAAGTG...........................................................................................................................................................................................................................................................................................................2711.00100000000010000000
....................................................................................................................................CAAACAAACGCACTTCTGAAAGATAC......................................................................................................................................................................................................2611.00100000000000010000
.................................................................................................................................................................................................................................................................................................................TTCCTTCAAACTCTTGT-TTTAAACA-GATT-----------------...2911.00100010000000000000
........................................................................................................................................................................................................................................................................TGTCATTAGGGTTTTGTGATT---ATGCTGA.............................................................2811.00100000001000000000
........................................................................................................................................................................TTAATTC------------------------------------------------------AAATAATTAGTCTGCTAAAGTA.........................................................................................................2911.00100000001000000000
...................................................................................................................................TCAAACAAACGCACTTCTGAAAGA.........................................................................................................................................................................................................2411.00100000001000000000
...........................................................................................................................................................................................................................................................TTTAAGATTGTGATGTCATTAGGGTT...............................................................................2611.00100000010000000000
.....................................TATGAAGAGCCTTGTAAGTGCA.........................................................................................................................................................................................................................................................................................................2211.00100000001000000000
............................................................................................................................................................................................................................................................TTAAGATTGTGATGTCATTAGGGT................................................................................2411.00100000000001000000
droSec2
ACTCCGGAAGTTATATGTGCCAAGTAAATACAGATCCTATGAAGAGCCTTGTAAGTGCATCT------------------------T----AGCATACCGTTATAAAAATTAACAAAAACATTA--CTCAATCAAACAAACGCACTTCTGAAAGATACATTCAGCAGGTTAATTC------------------------------------------------------AAATAATTAGTCTGCTAAAGTATTTAAGATTGTGATGTCATTAGGGTTTTGTGATT---ATGCTAACCTACGTGATTTCCTTCAAACTCTTGT-TTTAAACA-GATT-----------------TGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..TCCGGAAGTTATATGTGCCAAGTAAA........................................................................................................................................................................................................................................................................................................................................2611.0010100
dm3
ACTCCGGAAGTTATATGTGCCAAGTAAATACAGATCCGATGAAGAGCCTTGTAAGTGCATCT------------------------T----AACATACCGTTATAAAAAGTGACAAAAACAACAAAACCAACAAAACCAATCCAATTTTACAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................TCCGATGAAGAGCCTTGTAA..............................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000200000000000000000000000000000000000
..................................TCCGATGAAGAGCCTTGTAAGTGC..........................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TAAATACAGATCCGATGAAGAGCCTT..................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000002000000000
..TCCGGAAGTTATATGTGCCAAGTAAA........................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TACAGATCCGATGAAGAGCCTTGTAAG.............................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TGCCAAGTAAATACAGATCCGATGAAGA.......................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................ATGAAGAGCCTTGTAAGTGCA.........................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.................TGCCAAGTAAATACAGATCCGATGAA.........................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CAAGTAAATACAGATCCGATGAAGAGC.....................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AAATACAGATCCGATGAAGAG......................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................TGAAGAGCCTTGTAAGTGCAT........................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
.........................AAATACAGATCCGATGAAGAGCCT...................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................ATCCGATGAAGAGCCTTGTAA..............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................AGAGCCTTGTAAGTGCATCT------------------------T----.........................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TCT------------------------T----AACATACCGTTATAAAAAGTGA...................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CTCCGGAAGTTATATGTGCCAAGTAAA........................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................GATGAAGAGCCTTGTAAGTGCATCT------------------------..............................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................TAAATACAGATCCGATGAAGAGCCTTG.................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................ATCCGATGAAGAGCCTTA.................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
...................................................TAAGTGCATCT------------------------T----AACATACCG................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............TGTGCCAAGTAAATACAGATC................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TGCATCT------------------------T----AACATACCGTTA.............................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
........................TAAATACAGATCCGATGAAGAGCCTTGT................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................AGTGCATCT------------------------T----AACATACCGTT..............................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................TGTAAGTGCATCT------------------------T----AACATACCGTTA.............................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GATCCGATGAAGAGCCTT..................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TAAATACAGATCCGATGAAGAGCCT...................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................CT------------------------T----AACATACCGTTATAAAAAGTGA...................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CCGGAAGTTATATGTGCCAAGTAAATAC.....................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TACCGTTATAAAAAGTGACA.................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
...........................ATACAGATCCGATGAAGAGCCT...................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....................AAGTAAATACAGATCCGATGAAGAGCC....................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................AAGAGCCTTGTAAGTGCATCT------------------------..............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CAAGTAAATACAGATCCGATGAAGAG......................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............ATATGTGCCAAGTAAATACAG...................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................ACAACAAAACCAACAAAA............................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
ATTCCGGGAGTTATATGTGCCAAGTAAATACAGATCCTATGAAGAGCCTTGTAAGTGCATCA------------------------A---------ACCATTATAAAACGTAACAAAAACAGTA--TTCAAGCAAATAAAATCACCTCTCAAAGACACATTCA-------AATTCAATTAT-------TTTTTTGTATTCAAAATATTTATTATTAA----------------------------------------TTTTTTATATAAAATGGTTTT--TGATTCATATGCTGACC----TGAAGTTCCCCAATGTCGGGT-ATTGAAAA-AGTC-----------------TTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
ACTCCGGAAGTTATATGTGCCAAGTAAATACAGATCCTATGAAGAGCCTTGTAAGTGCATCT------------------------ACATATGTATACCATTATTAAATGTAAGAAAAACAGTA--TTCAAGCAAACAA-----CATCTGAAACCCACATTC-----GTTAATTA------------------------------------------------------AAAACTTTTAT--------TTATTTAAGTTTCCTATATTAAATAGTTTTTATGCTTCTCAT----TCCGACCTGAAGTTCTCCTATATCTGGT-TTAGAAAAAAAACTTGCGAGCGAATCATTGTGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
ACTCCGGCAGCTACATGTGCCAGATTAATACAGATCCTATGAAGAGCATTGTAAGTGCATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
ACTCCGGCAGCTACATGTGCCAAGTTAATACTGATCCTATGAAGAGCCTCGTAAGTGAATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ATTATTTA--------------------------------------------------------------------------------------------------------------------------ATCAAATAAAAACACCTCTTAACGAGGTAAA---------AAACTAGTGACGACCGCAACTTCAACATACAAAAGTTCTGATATCAACATTTGTGACGAAAAAT----------------------------------------GATT--ACACT----------------------------------CGTCATTAAATA-GACT-----------------T-TSizeHit CountTotal NormTotal
No Reads
droEle1
ACTCCGGCAGCTACATGTGCCAAGTTAATACAGATCCCATGAAGAGCCTTGTAAGTGCATCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
A-----------------------------CAGATCCTATGAAAAGCCATGTAATCCT-TCTTCGAAGGACCGGATAAAAATAGCCA---------A-----------------CTACCCATTA--CTCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
ATCGCGGTGGCTACATGTGCCAGCTCAACACGGATCCCATGAAGAGCCAGGTGAGTCGATTG-----------AATAAG--T----T----GCCTTGCCGT-----------GCAGAAACA--------AATCACGCATACGCACTGTTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
ACTCCGGCAGTTACATGTGCCAAGTTAATACAGATCCCATGAAGAGCCTTGTAAGTGCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
ATTCTGGAAGCTACATGTGTCAAGTTAATACAGACCCAATGAAAAGTCAGGTAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
ATTCTGGTAGCTACATGTGTCAAGTGAATACAGACCCAATGAAAAGCCAAGTAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
ACTCCGGCAGCTACATGTGCCAAGTGAATACGGATCCCATGAAGAGCCTTGTAAGTGCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
ACTCCGGCAGCTACATGTGCCAAGTGAATACGGATCCCATGAAGAGCCTTGTAAGTGCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
ATGCCGGCAAATACATGTGTCAGGTCAACACAGATCCCATGAAAATGCAAGTAAGTACAATT------------------------T----ACTATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
ATTCTGGCAGCTACATGTGTCAAGTGAATACAGATCCCATGAAAAGTCTGGTAAGTCAACCA------------------------C----AGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
ATTCTGGTAGCTACATGTGTCAAGTGAATACAGATCCCATGAAAAGTCTGGTAAGTCAACCA------------------------C----AGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
ATTCTGGCAGCTACATGTGTCAAGTGAATACGGATCCCATGAAGAGTCTGGTAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 05:53 AM