ID:dsi_6439 |
Coordinate:3r:4164473-4164532 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -3.1 | -2.8 | -2.8 |
 |
 |
 |
exon [3r_4164298_4164472_+]; CDS [3r_4164298_4164472_+]; CDS [3r_4164533_4164849_+]; exon [3r_4164533_4164849_+]; intron [3r_4164473_4164532_+]
No Repeatable elements found
| ##################################################------------------------------------------------------------################################################## GGACATCACCACCACGAGGGCGCTGACTCGGGAAATTTCGGACATAAAGGGTATGTGCTCTGTGTGTGCCGCCACCTCTGACTTTTCTCAATCTATTTCCATGGTTACAGACACAGTTCGTTGAGCTTCCGAAACGCGGAGCGCATGGAGCGCGGCTCCT **************************************************.........(((((...((((........((..........))........)))))))))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M025 embryo |
O002 Head |
SRR553488 RT_0-2 hours eggs |
SRR618934 dsim w501 ovaries |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|
| .....................GCTGACTCGGGAAATTTCGGAC..................................................................................................................... | 22 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 | 0 |
| ......................................................GTGCTCTGTGTGTGCCGCC....................................................................................... | 19 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| ....................................................................................................................................AACGCGGAGCGCATGGAGCGCGGCTC.. | 26 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...................GCCTTGACTCGGGAAATGTCG........................................................................................................................ | 21 | 3 | 2 | 0.50 | 1 | 0 | 0 | 0 | 1 | 0 |
| ...............................................................................................................................TCCGAAAGGCGTAGCGGATG............. | 20 | 3 | 2 | 0.50 | 1 | 0 | 0 | 1 | 0 | 0 |
| ................................................................................................................................CCGAAAGGCGTAGCGGATG............. | 19 | 3 | 10 | 0.10 | 1 | 0 | 0 | 1 | 0 | 0 |
| ........................................................................................................................................CGCAGCGGACGGAGCGCGG..... | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 |
|
CCTGTAGTGGTGGTGCTCCCGCGACTGAGCCCTTTAAAGCCTGTATTTCCCATACACGAGACACACACGGCGGTGGAGACTGAAAAGAGTTAGATAAAGGTACCAATGTCTGTGTCAAGCAACTCGAAGGCTTTGCGCCTCGCGTACCTCGCGCCGAGGA
**************************************************.........(((((...((((........((..........))........)))))))))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
GSM343915 embryo |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|
| .....................................................................GCGGTGGAGACTGATA........................................................................... | 16 | 1 | 2 | 0.50 | 1 | 1 | 0 | 0 |
| .........GGGGTGCTGCCGCAACTGA.................................................................................................................................... | 19 | 3 | 15 | 0.07 | 1 | 0 | 1 | 0 |
| ..................................................................................................................TCAAGCCAGTCGAAGGC............................. | 17 | 2 | 20 | 0.05 | 1 | 0 | 0 | 1 |
Generated: 04/23/2015 at 09:36 PM