ID:dsi_6436 |
Coordinate:3l:7568298-7568447 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -31.7 | -31.5 | -31.5 |
 |
 |
 |
Antisense to intron [3l_7567961_7569215_-]
No Repeatable elements found
|
ATCGACTCGACAATTTATCAAAATATTTACATAGACGAGAGAGACCCAAGGTGAGTGCCAATCAAAATTTTGCTATTCTACATCTGATGTGTATGATCTTGACTTTGGCATTTTGAAGTTTCAATATTGAGTAGGAGATGCGCCGAATTGCAATTAATGTAATTAAATAGTTGCGAAGCTGTCAGCAATACTGAGTAGCTGGTCAACTTACTTTGACACCATCGAAAATGCTGATCATGATGCCATGTAC
**************************************************..(((((((((((((.(((.(((...((.......))...))).))).))))..))))))))).............(((.(((.....)))..))).(((((((((...........)))))))))(((((((((.....)))).)))))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553486 Makindu_3 day-old ovaries |
M024 male body |
SRR553485 Chicharo_3 day-old ovaries |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................TGATGTGTATGATCTTGACTTTGGCA............................................................................................................................................ | 26 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ......................................................................................ATGGGTATAATCTTGACTTGGGC............................................................................................................................................. | 23 | 3 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 |
| ...................................................................................................................................................................TAAATAGTTGCGAGGCTGTCAGCAAA............................................................. | 26 | 2 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ...........................................................................................TATGATCTTGACTTTGGC............................................................................................................................................. | 18 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 |
| ...................................................................................................................................................................................................................TCTGACACCATCGAA........................ | 15 | 1 | 6 | 0.17 | 1 | 0 | 0 | 0 | 1 |
| ....................................GAGAGAATCCTAAGGTGAG................................................................................................................................................................................................... | 19 | 3 | 12 | 0.08 | 1 | 0 | 1 | 0 | 0 |
|
TAGCTGAGCTGTTAAATAGTTTTATAAATGTATCTGCTCTCTCTGGGTTCCACTCACGGTTAGTTTTAAAACGATAAGATGTAGACTACACATACTAGAACTGAAACCGTAAAACTTCAAAGTTATAACTCATCCTCTACGCGGCTTAACGTTAATTACATTAATTTATCAACGCTTCGACAGTCGTTATGACTCATCGACCAGTTGAATGAAACTGTGGTAGCTTTTACGACTAGTACTACGGTACATG
**************************************************..(((((((((((((.(((.(((...((.......))...))).))).))))..))))))))).............(((.(((.....)))..))).(((((((((...........)))))))))(((((((((.....)))).)))))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
SRR553486 Makindu_3 day-old ovaries |
SRR553487 NRT_0-2 hours eggs |
SRR553485 Chicharo_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................AGACTGCAGAGACTAGAACT.................................................................................................................................................... | 20 | 3 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 |
| ......AGCTGTTAAAAAGTTTTACA................................................................................................................................................................................................................................ | 20 | 2 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ....................................................................................TCTAGACATACTAGAACT.................................................................................................................................................... | 18 | 2 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 |
| .......................AAAAATGTATCTGGTCT.................................................................................................................................................................................................................. | 17 | 2 | 18 | 0.06 | 1 | 0 | 0 | 1 | 0 |
| ........................................................................GGTAAGATGAAGACTA.................................................................................................................................................................. | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 |
| .....................................................................................................................................................AGTTAATTATATTAACTTATC................................................................................ | 21 | 3 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 |
Generated: 04/24/2015 at 10:23 AM