ID:dsi_6389 |
Coordinate:3l:16214362-16214511 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -15.0 | -14.7 | -14.7 |
 |
 |
 |
intergenic
No Repeatable elements found
| mature | star |
|
TAAGAAATCGTCCTCCTGCAGTAGTTTTCTTTACGACATCCTATTTCGAGGTATTTTGTAACCGGAGTCCATAGCGAAAATCTCCTATTCAAAAATTATATTTTGGTTCCTGTGTTATTTGATTTGTGTTAATTGTTTATGTTTAATTGTAATTGGTTTGTTAGTACTTACATAATTTTCTGCATTTATTGGTTGTTCATTGTGGAAGTCCTTCATAGTTGATTTCTGCGTTGGTAATTTTCTAAATTTA
**************************************************........(((((((....(((((.(((..........((((((......))))))))))))))...........((((.......((((((.......((((......))))......))))))......))))...))))))).....************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553485 Chicharo_3 day-old ovaries |
SRR553488 RT_0-2 hours eggs |
M024 male body |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|---|
| .................................................................................................................................................................................................TGGTGATTGTGGAAGTCC....................................... | 18 | 2 | 6 | 0.33 | 2 | 2 | 0 | 0 | 0 |
| ................................................................................................................................................................................................................................TCTGCGTTGGTAATACTTTAAA.... | 22 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ........................................................................................................................................TTATGTTTAATTGTAA.................................................................................................. | 16 | 0 | 3 | 0.33 | 1 | 0 | 1 | 0 | 0 |
| ..................................................................................................................................................................................................GGTGATTGTGGAAGTCC....................................... | 17 | 2 | 18 | 0.22 | 4 | 4 | 0 | 0 | 0 |
| ...............................................................................................................................................................................................CTTGGTGATTGTGGAAGTCC....................................... | 20 | 3 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 |
| .................................................................................................................................TAGTTGTTTATGGTTAATTGTT................................................................................................... | 22 | 3 | 8 | 0.13 | 1 | 0 | 1 | 0 | 0 |
| ....................................................................................................................................................................................................TGATTGTGGAAGTCC....................................... | 15 | 1 | 11 | 0.09 | 1 | 1 | 0 | 0 | 0 |
| ............................................................................................ACATTATCTTCTGGTTCCTG.......................................................................................................................................... | 20 | 3 | 12 | 0.08 | 1 | 0 | 0 | 1 | 0 |
| ....AAATCGTCGTCGTGCAGT.................................................................................................................................................................................................................................... | 18 | 2 | 15 | 0.07 | 1 | 0 | 0 | 0 | 1 |
|
ATTCTTTAGCAGGAGGACGTCATCAAAAGAAATGCTGTAGGATAAAGCTCCATAAAACATTGGCCTCAGGTATCGCTTTTAGAGGATAAGTTTTTAATATAAAACCAAGGACACAATAAACTAAACACAATTAACAAATACAAATTAACATTAACCAAACAATCATGAATGTATTAAAAGACGTAAATAACCAACAAGTAACACCTTCAGGAAGTATCAACTAAAGACGCAACCATTAAAAGATTTAAAT
**************************************************........(((((((....(((((.(((..........((((((......))))))))))))))...........((((.......((((((.......((((......))))......))))))......))))...))))))).....************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553485 Chicharo_3 day-old ovaries |
SRR553487 NRT_0-2 hours eggs |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|
| ................................................................................AGAGGATAAGGTTTTTATGTAAA................................................................................................................................................... | 23 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| .........................AAAGAGACGCTGTAGCATA.............................................................................................................................................................................................................. | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 1 |
| .................................................................................................................TAGTAAACTAAACAAAATTAAC................................................................................................................... | 22 | 3 | 20 | 0.05 | 1 | 0 | 1 | 0 |
Generated: 04/24/2015 at 03:05 AM