ID:

dsi_6387

 Coordinate:

3l:984416-984565 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.5 -4.8 -4.5

Flybase annnotation

three_prime_UTR [3l_984309_984377_+]; exon [3l_984125_984377_+]

No Repeatable elements found

Sense Strand Reads

############----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AAGCCAAAACGCAATCCAAATCAAGAATCAAGATTCAAGACAATGGCTTGGTAAGCAATGAGAAGACTTTCAGGTTGGGATTACTTTTCAATGTTTTTATAAAATACTTTTGTTCGTTTCGGTTTTCGGTTTTCCGTTTTTAGGTTTTTGTTTTCTTGGATTAATTAGAACATTCATTTCGACATTTAAAGTTAATTTGAACATAAAGTTTGCACTAAAGTTTATAGAAAATGTTGAGTTTTGGACGTGG
***************************************************************************************************......................(((((.((((.((((....................))))..))))))))).****************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 SRR902009
testis
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 M053
female body
...................................................................................................TAAAATACTTTTGTTCGTTTCGGT............................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0 0 0 0 0
...........................................................................................................TTTTGTTCGTTTCGGTTTTCGGTTT...................................................................................................................... 25 0 1 2.00 2 0 0 2 0 0 0 0 0 0
.......................................................................................................ATACTTTTGTTCGTTTCGGTTT............................................................................................................................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0
...........................................TGGCTTGGTAAGCAATGAGAAGACTT..................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................................................TAAAGTTTGCACTAAAGTTTATAGA...................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................TGTTTTCTTGGATTAATTAGAACA.............................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.................................................................................................TATAAAATACTTTTGTTCGTTTCGGTT.............................................................................................................................. 27 0 1 1.00 1 0 0 0 0 0 1 0 0 0
.................................................................................................................................................................TAATTAGAACATTCATTTCGACATT................................................................ 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................TGGCTTGGTAAGCAATGAGAAGAC....................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................GGATTAATTAGAACATTCATTTCGACATT................................................................ 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0
........................................................................................................TACTTTTGTTCGTTTCGGTTTTCGGTT....................................................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.........................................................................GTTGGGATTTCTTTTAAA............................................................................................................................................................... 18 2 20 0.60 12 0 0 0 0 0 0 10 2 0
.....................................................................................................................................................GTTGTGTTGGATTATTTAGAA................................................................................ 21 3 5 0.20 1 0 0 0 0 0 0 1 0 0
.........................................................................................................................................................................................TTAAAGTTAATCTGAGCA............................................... 18 2 11 0.18 2 0 0 0 0 0 0 0 2 0
...................................................................................................................................TTGCGTTTTTAGGTTTT...................................................................................................... 17 1 7 0.14 1 0 1 0 0 0 0 0 0 0
............................................................................................................TTTGTTCGTTTTGGTTTAAGGT........................................................................................................................ 22 3 10 0.10 1 0 0 0 0 0 0 0 0 1
................................................................GACTTTCTGATTGGGATT........................................................................................................................................................................ 18 2 17 0.06 1 0 0 0 0 0 0 0 1 0
.................................................................ACTTTCTGGTTGGGA.......................................................................................................................................................................... 15 1 17 0.06 1 0 0 0 0 0 0 0 1 0
..........................................................................................................................................................CTTGGAATAATTAGA................................................................................. 15 1 17 0.06 1 1 0 0 0 0 0 0 0 0
...............CTAAATCAAGAATCA............................................................................................................................................................................................................................ 15 1 20 0.05 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................AAGTTAATTTGAGCA............................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 1 0
................................................................................................................................................ATTTTGTTTTCTTGGACT........................................................................................ 18 2 20 0.05 1 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

TTCGGTTTTGCGTTAGGTTTAGTTCTTAGTTCTAAGTTCTGTTACCGAACCATTCGTTACTCTTCTGAAAGTCCAACCCTAATGAAAAGTTACAAAAATATTTTATGAAAACAAGCAAAGCCAAAAGCCAAAAGGCAAAAATCCAAAAACAAAAGAACCTAATTAATCTTGTAAGTAAAGCTGTAAATTTCAATTAAACTTGTATTTCAAACGTGATTTCAAATATCTTTTACAACTCAAAACCTGCACC
******************************************************************************......................(((((.((((.((((....................))))..))))))))).*************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR902009
testis
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
.................................................................................................................AGCAAAGCCAAAAGCCAAAAGG................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0
...........................................................................................................................................................................TATGTAAGGCTGTAAATTT............................................................ 19 2 5 0.20 1 0 0 1 0 0
..............AGGTTTACTTTTTAGTTCT......................................................................................................................................................................................................................... 19 2 5 0.20 1 0 0 0 1 0
..............................TCTAAGTTGTGTTACCCCA......................................................................................................................................................................................................... 19 3 20 0.15 3 0 3 0 0 0
..............................TCTAAGTTGTGTTACCCCAC........................................................................................................................................................................................................ 20 3 8 0.13 1 0 1 0 0 0
...........................................................................................................................................................................................TTTCAATTAAACCTGT............................................... 16 1 12 0.08 1 0 0 0 0 1
.........................................................................................................................................................AGAACCTGACTAATCTT................................................................................ 17 2 15 0.07 1 0 0 0 0 1
...........................................................................................................................................................................TATGTAAAGCTTTAAATTT............................................................ 19 2 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:984366-984615 + dsi_6387 AAGCC-------------AA-AACGCAATC--------CAA-ATCAAGAATCA--------------AGATTCA---AGACAATG---------------------------------------------------------------------------------------------------GC-----TTGGT---AA---GCA------ATGAGAAGACTT--TCA----G-G----TTGGGATTA--CTT-TTCAAT--GTTTTTATAAAATACTTTT-GTT-CG-TTTCGGTTTT--CG------GTTTTCCG-TTT------------------------TT--------AGG---T--TTTTGTTTTC-----TTGGATTAATTAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGT-TTGCACTAAAGTT-----TATAGAAAA--------TGTT-GAGT--T---TTGGACGTGG
droSec2 scaffold_2:1047782-1048024 + AAGCC-------------AA-AACGCAATC--------CAA-ATCAAGAATCA--------------AGATTCA---AGACAATG---------------------------------------------------------------------------------------------------GC-----TTGGT---AA---GCA------ATGAGAAGACTT--TCA----G-G----TTGGGATTA--CTT-TTCAAT--GTTTTTATAAAATACTTTT-GTT-CG-TTTCGGTTTT--CC------GTT--------T------------------------TT--------AGG---T--TTTTGTTTTC-----TTGGATTAATTAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGT-TTGCACTAAAGTT-----TATAGAAAA--------TGTT-GAGT--T---TTGGACGTGG
dm3 chr3L:1036287-1036539 + AAGCC-------------AA-ACCGCAATG--------CAAAATCAAGAATCA--------------AGATTCA---AGACAACG---------------------------------------------------------------------------------------------------GT-----TTGGT---AA---GCA------ATGAGAAGACTT--TCA----G-G----TT-GGGTTA--CTT-TTCAAT--GTTTTTATAAAATACTTTTTGTT-CG-TTTCGGTTTT--CC------GTTTTTAAGTTT------------------------TT--------ATGT--T--TTTTGTTTTC-----TTCGATTAATTAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGT-TTGCACTAAAGTT-----TATAGAAAA--------TGTT-GAGT--T---TTGGACGTGG
droEre2 scaffold_4784:1038649-1038882 + AAGCC-------------AA-ACCGCAATT-------GCA---------ATCA--------------AGATTCA---AGAAAACG---------------------------------------------------------------------------------------------------GC-------------AAGAAGCA------GTGAGAAGACTT--TCA----G-G----TT-GGGTTA--CTT-TTCAAT--GTTTTTATAAAATACTTTT-GTT-CG-TTTCGGTTTT--CC------ATT--------T------------------------TT--------AGGT--T--TTTTGTTTTC-----TTGGATTAATAAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGT-TTGCACTAAAGTT-----TATAGAAAA--------TGTT-GAGT--T---TTGGACGTGG
droYak3 3L:1012948-1013215 + AAGCC-------------AA-ACCGCAATT-------CCA---------ATCA--------------AGATTCA---AGACAA---GCAA-GAAATGCAA----GAAAATCAAGAAAATCAAG----------A------------------------------------------------AA------------AGCAAGAAGCA------ATGAGAAGACTT--TCA----G-G----TT-GGGTTA--CTT-TTCAAT--GTTTTTATAAAATACTTTT-GTT-CG-TTTCGGTTTT--CC------ATT--------T------------------------TT--------AGGT--T--TTTTGTTTTC-----TTGGATTAATAAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGT-TTGCACTAAAGTT-----TATAGAAAA--------TGTT-GAGT--T---TTGGACGTGG
droEug1 scf7180000409184:1061739-1062001 + AAGTC-------------AA-AAAGCAATT--------CAA-GAAAAGAGT--------GCCG----------A---AGAGAGCG----------------------------------------------------------------------------------------------GTGAAGG-----TTGGT---AA---GCA------ATAAGAAGACTT--TCG----GGG----TT-GGGTTA--CTT-TTCAAT--GTTTTTATAAAATACTTTT-GTT-CG-TTTCGGTTTT--CCATTTC-------CG-TTT----T--TCGTTTTTCGCTT----TT--------AGA---T--TTTTGTTTT------TTGGATTAATTAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGT-TTGCACTAAAGTT-----TATAGAAAA--------TGTT-GAGT--T---TTGGACTTGG
droBia1 scf7180000300910:1135655-1135939 + AAGAT-------------TA-ACCGCATTCCAAGGTG------------------------------CGATTCA---GG--AATGGGCTTGGGATTGCTACGGGGAAGATCCAAAAGTTCCTGTGCCCCCCACG------------------------------------------------TC------------AGCCCAAAGCA------AAGACAAGACTT--TCC----GGC----CT-GGGTTA--CTT-TTCAAT--GTTTTTATAAAATACTTTT-GTT-CG-TTTCGGTTT---CG-GTTTCATT--------T------------------------T---------C-G---C--TTTTGTTTTC-----TCGGATTAATTAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGT-TTGCACTAAAGTT-----TATAGAAAA--------TGTT-GAGT------TTGGACTCGG
droTak1 scf7180000415111:36498-36725 - C---CAA------GATAGAA-ACTGCATTT--------CAA----------------------GATGAGGTTC--------------------------------------------------------------------------------------------------------------------------C---AA---GCA------ATGAAAAGACTTTTTCG----G-G--C-TT-GGGTTA--CTT-TTCAAT--GTTTTTATAAAATACTTTT-GTT-CG-TTTCGGTTTT--CC------ATT--------T------------------------TT--------CCGC--T--TTTTGTTTTC-----TTGGATTAATTAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGT-TTGCACTAAAGTT-----TATAGAAAA--------TGTT-GAGT--T---TTGGACTTGG
droEle1 scf7180000491249:4623040-4623274 - AAGCC-------------AAAACTGCATTC--------CAA-AT----------------------------------G--CATA---------------------------------------------------------------------------------------------------TA-----TTGGT---AG---GCA------ATGAGAAGACTT--GCT----GGG----TT-GGGTTA--CTT-TTCAAT--GTTTTTATAAAATACTTTT-GTT-CG-TTTCGATTTT--CC------GTTTTCCA-TTT------------------------TT--------CGTTTTT--TTTTGTTTTC-----TTGGATTAATTAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGT-TTGCACTAAAGTT-----GATAGAAAA--------TGTT-GAGT--T---TTGGACCTGA
droRho1 scf7180000780079:163590-163818 - AAGCC-------------AA-ATCGCATTCAAA-GTT------------------------------GGGCTAA---TG--AATG---------------------------------------------------------------------------------------------------GG-----TTGAT---TG---GCAGTA---AAAAAAACGCTT--T------GGG----TT-GGGTTA--CTT-TTCAAT--GTTTTTATAAAATACTTTT-GTT-CG-TTTCGATTTT--CC------ATT--------T------------------------TT--------CGAT--T--TTTTGTTTTC-----TTGGATTAATTAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGT-TTGCACTAAAGTT-----GATAGAAAA--------TGTT-GAGT--T---TTGG------
droFic1 scf7180000454113:1041010-1041249 - AAGCC-------------AA-ACCGCATTCCGA-GTG------------------------------AGGGTGA---TG--AATG---------------------------------------------------------------------------------------------------GG-----TTGGT---AA---GCA------ATGAAAAGACTT--TCT----GGG----TT-GGGTTA--CTT-TTCAAT--GTTTTTATAAAATACTTTT-GTT-CG-TTTCGGTTTT--TC------ATTTTTCG-CAT------------------------TT--------C-GC--T--TTTTGTTTTC-----TTGGATTAATTAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGT-TTGCACTAAAGTT-----GATAGAAAA--------TGTT-GAGT--T---TTGGACTTGG
droKik1 scf7180000302329:541584-541800 - AAGCC-------------AA-G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAATTAAAAGTCTTTTTCA----A-G----TT-GGGTTA--CTTTTTCAAT--GTTTTTATAAAATACTTTT-GTT-CGCTTTCAGTTTT--CC------ATTTTCCG------------CATTTTT-GCA-----TTC-------AT-T--T--TTTTGTTTTC-----TTGGATTAATTAGA-ACATTCATTTCAT-----------------TTCGACATTTAA-AGTTAATTTGAACATAAAGTTTTGCACTAAAGTT-----GACAGAAAA--------TGTTCGAGT--T---GTGGA-----
droAna3 scaffold_13337:6873467-6873729 - AAATG-------------AT-ACTGCATTCCA--GTA------------------------------GAACTGT---GG--AATG-------------------------------------------------------------------------------------------------ATGG-----TTGTT---AA---A-----AAAATGAAACTACAA--TCC----GAG----TT-GGGTTA--CTT-TTCAAT--GTTTTTATAAAATACTTTT-GTT-CG-TTTCGGGTTTTTCC------ATG--------TT--TT--GCGTTTTTCACGTTTTTTTGT-------TTTTGT--TTTTGTTTTC-----TTGGATTAATTAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGT-TTGCACTAAAGTT-----GATAGAAAA--------TGTT-GAGTTTT---TTGGACTTGG
droBip1 scf7180000396709:602066-602309 - AAATG-------------AT-ACTGCATTC--------CAA---------G------------------------------CATG----------------------------------------------------------------------------------------------------G-----TTGTT---AA---ACA------ATGAAACTACAA--TCC----CAG----TT-GGGTTA--CTT-TTCAAT--GTTTTTATAAAATACTTTT-GTT-CG-TTTTGGGTTTTTCC------ATG--------TT--TT--GCGTTTTTCACGT----TT--------C--TTGT--TTTTGTTTTC-----TTGGATTAATTAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGTTTTGCACTAAAGTT-----GATAGAAAA--------TGTT-GAGT--TTTTTTGGACTTGG
dp5 Unknown_group_537:14951-15220 - AAGCA-------------AT-AAAGCAGC---------------------------GTCGCCGAATCGCATTCGTGTGG--AATG---------------------------------------------------------------------------------------------------CGTTCTGTTGGC---AA---GCA---AAAATGAGAAGACGA--TTCCATCGGGTTTTTC-GGGTTATCTTT-TTCAAT--GTTTTTATAAAATACTTTTT-----------------------------------------------------------------AATTTTGT-CGTTCG--T--TTCGTTT-----TTCGGTTAATTAGA-ACATTCATTTTTTTGTTTGTTTGTTTGTTTGTCGATATTTAA-GATTAATTTGAACATAAAGTTTTGCACTAAAGTT---TTGATAGAAAA---AA---AATT-GAAACAT---TTCGAC---G
droPer2 scaffold_150:13610-13879 - AAGCA-------------AT-AAAGCAGC---------------------------GTCGCCGAATCGCATTCGTGTGG--AATG---------------------------------------------------------------------------------------------------CGTTCTGTTGGC---AA---GCA---AAAATGAGAAGACGA--TTCCATCGGGTTTTTC-GGGTTATCTTT-TTCAAT--GTTTTTATAAAATACTTTTT-----------------------------------------------------------------AATTTTGT-CGTTCG--T--TTCGTTT-----TTCGGTTAATTAGA-ACATTCATTTTTTTGTTTGTTTGTTTGTTTGTCGATATTTAA-GATTAATTTGAACATAAAGTTTTGCACTAAAGTT---TTGATAGAAAA---AA---AATT-GAAACAT---TTCGAC---G
droWil2 scf2_1100000004511:4643550-4643707 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----TT-AGGTTA--TTT-TTCAAT-TGTTTTTATAAAATACTTTATGTT----TTTCT--TTT--TGGTTTCTGTA--------TTTCTT------TTGTTG-------TT------GT-TGTTGT--T--TTTGTTG-----TTGGGTTAATTAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGTTTTGCACTAAAGT------------------------------------------------
droVir3 scaffold_13049:296049-296219 + AC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--TTT-TTCAGTTCGTTTTTATAAAATATTTTA--TT-TA-TTTTT--TTT--TTATTTT-ATTTTTATTTTT------------------------TTAA-------TTT--TTTT--TTTGTTA-----TTAGATTAATAAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGTTTTGCACTAAAGTT-----GATAGAAAACTGAAAAACGT----------------------
droMoj3 scaffold_6680:882394-882705 - AAAAT--ACTGTAAATA-C-------------------TA---------AACAAATACCAAATAATTATAT-------G--AA--------------------------------------------CCTAACATTTATTTAGATAGATAATATAATATGTAGTAGATATTCCTGATCAACAAATC-----TTGCT---GG---GC-GTA---AAAAAAAAACTC--GTA----T-T--C-TT-CCATTT--TTT-TT--TT--GTTTTTATAAAATATTTTTTATTTCA-TT-----TTT--TTGTTGATATTTTCC--------TTCTGTTTTTTTTT-T-----TT--------TTTT--T--TTTTTTGTTA-----TTTGATTAATAAGAAACATTCAT----------------------TTCGACATTTAAAAGTTAATTTTAACATAAAGTTTTGCACTAAAGTTGTTTTGATAAAAAA--------CGT----------------------
droGri2 scaffold_15110:1598062-1598227 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT--TTG----T-T--T-TT-CGGTTA--CTT-TTCAAT-TGTTTTTATAAAATATTTTT--TT-TG-TTTCTTTTTT--T--TTGC-------CA-TTT------------------------TT--------------T--GTTTGTTTTCTGTTATACGATTAATAAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGT-TTGCACTAAAGTT-----GATAGAAAA--------CG-----------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AAGCC-------------AA-AACGCAATC--------CAA-ATCAAGAATCA--------------AGATTCA---AGACAATG---------------------------------------------------------------------------------------------------GC-----TTGGT---AA---GCA------ATGAGAAGACTT--TCA----G-G----TTGGGATTA--CTT-TTCAAT--GTTTTTATAAAATACTTTT-GTT-CG-TTTCGGTTTT--CG------GTTTTCCG-TTT------------------------TT--------AGG---T--TTTTGTTTTC-----TTGGATTAATTAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGT-TTGCACTAAAGTT-----TATAGAAAA--------TGTT-GAGT--T---TTGGACGTGGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............................................................................................................................................................................................................................................................................TAAAATACTTTT-GTT-CG-TTTCGGT..............................................................................................................................................................................................................................2412.00200000020000000000
.......................................................................................................................................................................................................................................................................................TTTT-GTT-CG-TTTCGGTTTT--CG------GTTT.............................................................................................................................................................................................................2512.00200000000000020000
...................................................................................................................................................................................................................................................................................ATACTTTT-GTT-CG-TTTCGGTTT............................................................................................................................................................................................................................2211.00100000000000001000
...................................................................................TG---------------------------------------------------------------------------------------------------GC-----TTGGT---AA---GCA------ATGAGAAGACTT--.....................................................................................................................................................................................................................................................................................................2611.00100000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGT-TTGCACTAAAGTT-----TATAGA....................................2511.00100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................................TGTTTTC-----TTGGATTAATTAGA-ACA.........................................................................................................................2411.00100000000001000000
.............................................................................................................................................................................................................................................................................TATAAAATACTTTT-GTT-CG-TTTCGGTT.............................................................................................................................................................................................................................2711.00100000001000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TAATTAGA-ACATTCAT----------------------TTCGACATT.....................................................................................2511.00100000010000000000
...................................................................................TG---------------------------------------------------------------------------------------------------GC-----TTGGT---AA---GCA------ATGAGAAGAC.........................................................................................................................................................................................................................................................................................................2411.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................GGATTAATTAGA-ACATTCAT----------------------TTCGACATT.....................................................................................2911.00100000010000000000
....................................................................................................................................................................................................................................................................................TACTTTT-GTT-CG-TTTCGGTTTT--CG------GTT..............................................................................................................................................................................................................2711.00101000000000000000
droSec2
AAGCC-------------AA-AACGCAATC--------CAA-ATCAAGAATCA--------------AGATTCA---AGACAATG---------------------------------------------------------------------------------------------------GC-----TTGGT---AA---GCA------ATGAGAAGACTT--TCA----G-G----TTGGGATTA--CTT-TTCAAT--GTTTTTATAAAATACTTTT-GTT-CG-TTTCGGTTTT--CC------GTT--------T------------------------TT--------AGG---T--TTTTGTTTTC-----TTGGATTAATTAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGT-TTGCACTAAAGTT-----TATAGAAAA--------TGTT-GAGT--T---TTGGACGTGGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................................................GGTTTT--CC------GTT--------T------------------------TT--------AGG---T--TTTTGT....................................................................................................................................................2411.0011000
................................................................................................................................................................................................................................................................................................................................................................................TTGTTTTC-----TTGGATTAATTAGA-AC..........................................................................................................................2411.0010010
dm3
AAGCC-------------AA-ACCGCAATG--------CAAAATCAAGAATCA--------------AGATTCA---AGACAACG---------------------------------------------------------------------------------------------------GT-----TTGGT---AA---GCA------ATGAGAAGACTT--TCA----G-G----TT-GGGTTA--CTT-TTCAAT--GTTTTTATAAAATACTTTTTGTT-CG-TTTCGGTTTT--CC------GTTTTTAAGTTT------------------------TT--------ATGT--T--TTTTGTTTTC-----TTCGATTAATTAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGT-TTGCACTAAAGTT-----TATAGAAAA--------TGTT-GAGT--T---TTGGACGTGGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................CGATTAATTAGA-ACATTCAT----------------------T.............................................................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................A------ATGAGAAGACTT--TCA----G-G----TT-GGGTT...............................................................................................................................................................................................................................................................................2514.0040000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................GATTCA---AGACAACG---------------------------------------------------------------------------------------------------GT-----TTGGT---AA---GCA------...................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TCAAGAATCA--------------AGATTCA---AGACAACG---------------------------------------------------------------------------------------------------GT-----.........................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TCAAGAATCA--------------AGATTCA---AGACAACG---------------------------------------------------------------------------------------------------GT-----T........................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................ATAAAATACTTTTTGTT-CG-TTTCGGT..............................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
......................................................................TTCA---AGACAACG---------------------------------------------------------------------------------------------------GT-----TTGGT---AA---GCA------AT.................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--------TGTT-GAGT--T---TTGGACGTGG2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................CA--------------AGATTCA---AGACAACG---------------------------------------------------------------------------------------------------GT-----TTGGT---AA---G...........................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................TGAGAAGACTT--TCA----G-G----TT-GGGTTA--CT..........................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................GAGAAGACTT--TCA----G-G----TT-GGGT................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................A---AGACAACG---------------------------------------------------------------------------------------------------GT-----TTGGT---AA---GC..........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
................................................................................................................................................................................................................................................................................AAAATACTTTTTGTT-CG-TTTCGG...............................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................ACAACG---------------------------------------------------------------------------------------------------GT-----TTGGT---AA---GCA------A..................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TTTTC-----TTCGATTAATTAGA-ACATTCAT----------------------T.............................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CAAAATCAAGAATCA--------------AGATTCA---AGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TTAGA-ACATTCAT----------------------TTCGACATTTAA-AGT..............................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TCAAGAATCA--------------AGATTCA---AGACAACG---------------------------------------------------------------------------------------------------G...............................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................TTGTT-CG-TTTCGGTTTT--CC------GC...............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................A---GCA------ATGAGAAGACTT--TCA----G-G----TT-GGG.................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................TGTTTTC-----TTCGATTAATTAGA-............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................ATTCA---AGACAACG---------------------------------------------------------------------------------------------------GT-----TTGGT---.................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTT-----TATAGAAAA--------TGTT-GAGT--..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----TATAGAAAA--------TGTT-GAGT--T---TTGGACGTG.2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................ATCAAGAATCA--------------AGATTCA---AGACAACG---------------------------------------------------------------------------------------------------GT-----.........................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTT-GAGT--T---TTGGACGTG.1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTT-----TATAGAAAA--------TGTT-GAGT--T---T.........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................TCA---AGACAACG---------------------------------------------------------------------------------------------------GT-----TTGGT---AA---GT..........................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................T--TCA----G-G----TT-GGGTTA--CTT-TTCAAT--G...............................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................................................................AATACTTTTTGTT-CG-TTTCGGT..............................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TAGA-ACATTCAT----------------------TTCGACATTTAA-AGT..............................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCACTAAAGTT-----TATAGAAAA--------TGTT-GAG.................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................TTCA---AGACAACG---------------------------------------------------------------------------------------------------GT-----TTGGT---AT---............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................GAGAAGACTT--TCA----G-G----TT-GGGTTA--CT..........................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TCA--------------AGATTCA---AGACAACG---------------------------------------------------------------------------------------------------GT-----TTGGT---A................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................TTTTGTT-CG-TTTCGGTTTT--CC------GTT..............................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...................................................................................................................................................................................................T---AA---GCA------ATGAGAAGACTT--TCA----G-G----TT-G...................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................................ATCA--------------AGATTCA---AGACAACG---------------------------------------------------------------------------------------------------GT-----.........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.........................................................................................................................................................................................T-----TTGGT---AA---GCA------ATGAGAAGACTT--TCA----G-G----.......................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................CA--------------AGATTCA---AGACAACG---------------------------------------------------------------------------------------------------GT-----TTGGT---.................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......................................................................TTCA---AGACAACG---------------------------------------------------------------------------------------------------GT-----TTGGT---AA---GCA------A..................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................TAATTAGA-ACATTCAT----------------------TTCGACATT.....................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................ATTCA---AGACAACG---------------------------------------------------------------------------------------------------GT-----TTGGT---AA---............................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................T--TCA----G-G----TT-GGGTTA--CTT-TTC.....................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................TCA--------------AGATTCA---AGACAACG---------------------------------------------------------------------------------------------------GT-----TTGG.....................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TTGCACTAAAGTT-----TATAGAAAA--------TGT......................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AGTTAATTTGAACATAAAGT-............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AAGCC-------------AA-ACCGCAATT-------GCA---------ATCA--------------AGATTCA---AGAAAACG---------------------------------------------------------------------------------------------------GC-------------AAGAAGCA------GTGAGAAGACTT--TCA----G-G----TT-GGGTTA--CTT-TTCAAT--GTTTTTATAAAATACTTTT-GTT-CG-TTTCGGTTTT--CC------ATT--------T------------------------TT--------AGGT--T--TTTTGTTTTC-----TTGGATTAATAAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGT-TTGCACTAAAGTT-----TATAGAAAA--------TGTT-GAGT--T---TTGGACGTGGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................ATTCA---AGAAAACG---------------------------------------------------------------------------------------------------GC-------------AAGAAG...........................................................................................................................................................................................................................................................................................................................2111.0010000010
.......................................................................................................................................................................................................................................................................................................................ATT--------T------------------------TT--------AGGT--T--TTTTGTTTTC-----TTGGATT....................................................................................................................................2811.0010000100
droYak3
AAGCC-------------AA-ACCGCAATT-------CCA---------ATCA--------------AGATTCA---AGACAA---GCAA-GAAATGCAA----GAAAATCAAGAAAATCAAG----------A------------------------------------------------AA------------AGCAAGAAGCA------ATGAGAAGACTT--TCA----G-G----TT-GGGTTA--CTT-TTCAAT--GTTTTTATAAAATACTTTT-GTT-CG-TTTCGGTTTT--CC------ATT--------T------------------------TT--------AGGT--T--TTTTGTTTTC-----TTGGATTAATAAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGT-TTGCACTAAAGTT-----TATAGAAAA--------TGTT-GAGT--T---TTGGACGTGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................TCAAGAAAATCAAG----------A------------------------------------------------AA------------AGCAAGAAGC..........................................................................................................................................................................................................................................................................................................................2711.00101000000000
............................................................................................................ATCAAGAAAATCAAG----------A------------------------------------------------AA------------AGC.................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................GT--T--TTTTGTTTTC-----TTGGATT....................................................................................................................................2011.00101000000000
droEug1
AAGTC-------------AA-AAAGCAATT--------CAA-GAAAAGAGT--------GCCG----------A---AGAGAGCG----------------------------------------------------------------------------------------------GTGAAGG-----TTGGT---AA---GCA------ATAAGAAGACTT--TCG----GGG----TT-GGGTTA--CTT-TTCAAT--GTTTTTATAAAATACTTTT-GTT-CG-TTTCGGTTTT--CCATTTC-------CG-TTT----T--TCGTTTTTCGCTT----TT--------AGA---T--TTTTGTTTT------TTGGATTAATTAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGT-TTGCACTAAAGTT-----TATAGAAAA--------TGTT-GAGT--T---TTGGACTTGGSizeHit CountTotal NormTotal
No Reads
droBia1
AAGAT-------------TA-ACCGCATTCCAAGGTG------------------------------CGATTCA---GG--AATGGGCTTGGGATTGCTACGGGGAAGATCCAAAAGTTCCTGTGCCCCCCACG------------------------------------------------TC------------AGCCCAAAGCA------AAGACAAGACTT--TCC----GGC----CT-GGGTTA--CTT-TTCAAT--GTTTTTATAAAATACTTTT-GTT-CG-TTTCGGTTT---CG-GTTTCATT--------T------------------------T---------C-G---C--TTTTGTTTTC-----TCGGATTAATTAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGT-TTGCACTAAAGTT-----TATAGAAAA--------TGTT-GAGT------TTGGACTCGGSizeHit CountTotal NormTotal
No Reads
droTak1
C---CAA------GATAGAA-ACTGCATTT--------CAA----------------------GATGAGGTTC--------------------------------------------------------------------------------------------------------------------------C---AA---GCA------ATGAAAAGACTTTTTCG----G-G--C-TT-GGGTTA--CTT-TTCAAT--GTTTTTATAAAATACTTTT-GTT-CG-TTTCGGTTTT--CC------ATT--------T------------------------TT--------CCGC--T--TTTTGTTTTC-----TTGGATTAATTAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGT-TTGCACTAAAGTT-----TATAGAAAA--------TGTT-GAGT--T---TTGGACTTGGSizeHit CountTotal NormTotal
No Reads
droEle1
AAGCC-------------AAAACTGCATTC--------CAA-AT----------------------------------G--CATA---------------------------------------------------------------------------------------------------TA-----TTGGT---AG---GCA------ATGAGAAGACTT--GCT----GGG----TT-GGGTTA--CTT-TTCAAT--GTTTTTATAAAATACTTTT-GTT-CG-TTTCGATTTT--CC------GTTTTCCA-TTT------------------------TT--------CGTTTTT--TTTTGTTTTC-----TTGGATTAATTAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGT-TTGCACTAAAGTT-----GATAGAAAA--------TGTT-GAGT--T---TTGGACCTGASizeHit CountTotal NormTotal
No Reads
droRho1
AAGCC-------------AA-ATCGCATTCAAA-GTT------------------------------GGGCTAA---TG--AATG---------------------------------------------------------------------------------------------------GG-----TTGAT---TG---GCAGTA---AAAAAAACGCTT--T------GGG----TT-GGGTTA--CTT-TTCAAT--GTTTTTATAAAATACTTTT-GTT-CG-TTTCGATTTT--CC------ATT--------T------------------------TT--------CGAT--T--TTTTGTTTTC-----TTGGATTAATTAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGT-TTGCACTAAAGTT-----GATAGAAAA--------TGTT-GAGT--T---TTGG------SizeHit CountTotal NormTotal
No Reads
droFic1
AAGCC-------------AA-ACCGCATTCCGA-GTG------------------------------AGGGTGA---TG--AATG---------------------------------------------------------------------------------------------------GG-----TTGGT---AA---GCA------ATGAAAAGACTT--TCT----GGG----TT-GGGTTA--CTT-TTCAAT--GTTTTTATAAAATACTTTT-GTT-CG-TTTCGGTTTT--TC------ATTTTTCG-CAT------------------------TT--------C-GC--T--TTTTGTTTTC-----TTGGATTAATTAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGT-TTGCACTAAAGTT-----GATAGAAAA--------TGTT-GAGT--T---TTGGACTTGGSizeHit CountTotal NormTotal
No Reads
droKik1
AAGCC-------------AA-G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAATTAAAAGTCTTTTTCA----A-G----TT-GGGTTA--CTTTTTCAAT--GTTTTTATAAAATACTTTT-GTT-CGCTTTCAGTTTT--CC------ATTTTCCG------------CATTTTT-GCA-----TTC-------AT-T--T--TTTTGTTTTC-----TTGGATTAATTAGA-ACATTCATTTCAT-----------------TTCGACATTTAA-AGTTAATTTGAACATAAAGTTTTGCACTAAAGTT-----GACAGAAAA--------TGTTCGAGT--T---GTGGA-----SizeHit CountTotal NormTotal
No Reads
droAna3
AAATG-------------AT-ACTGCATTCCA--GTA------------------------------GAACTGT---GG--AATG-------------------------------------------------------------------------------------------------ATGG-----TTGTT---AA---A-----AAAATGAAACTACAA--TCC----GAG----TT-GGGTTA--CTT-TTCAAT--GTTTTTATAAAATACTTTT-GTT-CG-TTTCGGGTTTTTCC------ATG--------TT--TT--GCGTTTTTCACGTTTTTTTGT-------TTTTGT--TTTTGTTTTC-----TTGGATTAATTAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGT-TTGCACTAAAGTT-----GATAGAAAA--------TGTT-GAGTTTT---TTGGACTTGGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................T-ACTGCATTCCA--GTA------------------------------GAACTGT---GG--AAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
...............................A--GTA------------------------------GAACTGT---GG--AATG-------------------------------------------------------------------------------------------------ATGG-----TTGTT---.................................................................................................................................................................................................................................................................................................................................2611.001000001
.......................................................................TGT---GG--AATG-------------------------------------------------------------------------------------------------ATGG-----TTGTT---AA---A-----AAAAT.................................................................................................................................................................................................................................................................................................................2611.001000001
....................................................................AACTGT---GG--AATG-------------------------------------------------------------------------------------------------ATGG-----TTGTT---AA---............................................................................................................................................................................................................................................................................................................................2311.001010000
..............................CA--GTA------------------------------GAACTGT---GG--AATG-------------------------------------------------------------------------------------------------ATGG-----TTGTT---.................................................................................................................................................................................................................................................................................................................................2711.001000010
............................TCCA--GTA------------------------------GAACTGT---GG--AATG-------------------------------------------------------------------------------------------------ATGG-----TTGC.....................................................................................................................................................................................................................................................................................................................................2811.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAGT-TTGCACTAAAGTT-----..........................................2011.001000010
.....................ACTGCATTCCA--GTA------------------------------GAACTGT---GG--AA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
..................................GTA------------------------------GAACTGT---GG--AATG-------------------------------------------------------------------------------------------------ATG...............................................................................................................................................................................................................................................................................................................................................1911.001000010
droBip1
AAATG-------------AT-ACTGCATTC--------CAA---------G------------------------------CATG----------------------------------------------------------------------------------------------------G-----TTGTT---AA---ACA------ATGAAACTACAA--TCC----CAG----TT-GGGTTA--CTT-TTCAAT--GTTTTTATAAAATACTTTT-GTT-CG-TTTTGGGTTTTTCC------ATG--------TT--TT--GCGTTTTTCACGT----TT--------C--TTGT--TTTTGTTTTC-----TTGGATTAATTAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGTTTTGCACTAAAGTT-----GATAGAAAA--------TGTT-GAGT--TTTTTTGGACTTGGSizeHit CountTotal NormTotal
No Reads
dp5
AAGCA-------------AT-AAAGCAGC---------------------------GTCGCCGAATCGCATTCGTGTGG--AATG---------------------------------------------------------------------------------------------------CGTTCTGTTGGC---AA---GCA---AAAATGAGAAGACGA--TTCCATCGGGTTTTTC-GGGTTATCTTT-TTCAAT--GTTTTTATAAAATACTTTTT-----------------------------------------------------------------AATTTTGT-CGTTCG--T--TTCGTTT-----TTCGGTTAATTAGA-ACATTCATTTTTTTGTTTGTTTGTTTGTTTGTCGATATTTAA-GATTAATTTGAACATAAAGTTTTGCACTAAAGTT---TTGATAGAAAA---AA---AATT-GAAACAT---TTCGAC---GSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................ATTCGTGTGG--AATG---------------------------------------------------------------------------------------------------CGTTCTGTTGGC---.................................................................................................................................................................................................................................................................................................................................2612.0020110000000
........................GCAGC---------------------------GTCGCCGAATCGCATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.........................................................TCGCCGAATCGCATTCGTGTGG--.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..............................................................GAATCGCATTCGTGTGG--AATG---------------------------------------------------------------------------------------------------................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...................T-AAAGCAGC---------------------------GTCGCCGAATCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100000
...................................................................GCATTCGTGTGG--AATG---------------------------------------------------------------------------------------------------CGTTCTGTTGG.....................................................................................................................................................................................................................................................................................................................................2711.0010100000000
........................................................................CGTGTGG--AATG---------------------------------------------------------------------------------------------------CGTTCTGTTGGC---.................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.........................................................................GTGTGG--AATG---------------------------------------------------------------------------------------------------CGTTCTGTTGGC---.................................................................................................................................................................................................................................................................................................................................2211.0010100000000
........................................................................CGTGTGG--AATG---------------------------------------------------------------------------------------------------CGTTCTGTTG......................................................................................................................................................................................................................................................................................................................................2111.0010000010000
........................................................................CGTGTGG--AATG---------------------------------------------------------------------------------------------------CGTTCTGTTGGC---AA---G...........................................................................................................................................................................................................................................................................................................................2611.0010100000000
...........................................................................GTGG--AATG---------------------------------------------------------------------------------------------------CGTTCTGTTGGC---AA---GC..........................................................................................................................................................................................................................................................................................................................2411.0010100000000
....A-------------AT-AAAGCAGC---------------------------GTCGCCGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...........................................................................................................................................................................................................................AGACGA--TTCCATCGGGTTTTTC-G...................................................................................................................................................................................................................................................................................2311.0010010000000
..................................................................................................................................................................................................................................................C-GGGTTATCTTT-TTCAAT--................................................................................................................................................................................................................................................................1820.5010000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTTTGTTTGTTTGTTT..............................................................................................20200.0510000100000
droPer2
AAGCA-------------AT-AAAGCAGC---------------------------GTCGCCGAATCGCATTCGTGTGG--AATG---------------------------------------------------------------------------------------------------CGTTCTGTTGGC---AA---GCA---AAAATGAGAAGACGA--TTCCATCGGGTTTTTC-GGGTTATCTTT-TTCAAT--GTTTTTATAAAATACTTTTT-----------------------------------------------------------------AATTTTGT-CGTTCG--T--TTCGTTT-----TTCGGTTAATTAGA-ACATTCATTTTTTTGTTTGTTTGTTTGTTTGTCGATATTTAA-GATTAATTTGAACATAAAGTTTTGCACTAAAGTT---TTGATAGAAAA---AA---AATT-GAAACAT---TTCGAC---GSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................TGTGG--AATG---------------------------------------------------------------------------------------------------CGTTCTGTTGGT---.................................................................................................................................................................................................................................................................................................................................2111.001000001
........................................................................CGTGTGG--AATG---------------------------------------------------------------------------------------------------CGTTCTGTTGGC---.................................................................................................................................................................................................................................................................................................................................2311.001010000
.....................................................................ATTCGTGTGG--AATG---------------------------------------------------------------------------------------------------CGTT............................................................................................................................................................................................................................................................................................................................................1811.001001000
droWil2
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----TT-AGGTTA--TTT-TTCAAT-TGTTTTTATAAAATACTTTATGTT----TTTCT--TTT--TGGTTTCTGTA--------TTTCTT------TTGTTG-------TT------GT-TGTTGT--T--TTTGTTG-----TTGGGTTAATTAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGTTTTGCACTAAAGT------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................................................................................................TTCTT------TTGTTG-------TT------GT-TGTTG.............................................................................................................................................................20200.05101000
droVir3
AC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC--TTT-TTCAGTTCGTTTTTATAAAATATTTTA--TT-TA-TTTTT--TTT--TTATTTT-ATTTTTATTTTT------------------------TTAA-------TTT--TTTT--TTTGTTA-----TTAGATTAATAAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGTTTTGCACTAAAGTT-----GATAGAAAACTGAAAAACGT----------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----GATAGAAAACTGAAAAACG.......................2011.001000000000000000000000000000000000000001000000000000000000000000
droMoj3
AAAAT--ACTGTAAATA-C-------------------TA---------AACAAATACCAAATAATTATAT-------G--AA--------------------------------------------CCTAACATTTATTTAGATAGATAATATAATATGTAGTAGATATTCCTGATCAACAAATC-----TTGCT---GG---GC-GTA---AAAAAAAAACTC--GTA----T-T--C-TT-CCATTT--TTT-TT--TT--GTTTTTATAAAATATTTTTTATTTCA-TT-----TTT--TTGTTGATATTTTCC--------TTCTGTTTTTTTTT-T-----TT--------TTTT--T--TTTTTTGTTA-----TTTGATTAATAAGAAACATTCAT----------------------TTCGACATTTAAAAGTTAATTTTAACATAAAGTTTTGCACTAAAGTTGTTTTGATAAAAAA--------CGT----------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT--TTG----T-T--T-TT-CGGTTA--CTT-TTCAAT-TGTTTTTATAAAATATTTTT--TT-TG-TTTCTTTTTT--T--TTGC-------CA-TTT------------------------TT--------------T--GTTTGTTTTCTGTTATACGATTAATAAGA-ACATTCAT----------------------TTCGACATTTAA-AGTTAATTTGAACATAAAGT-TTGCACTAAAGTT-----GATAGAAAA--------CG-----------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 10:23 AM