dsi_6265

Antisense to exon [3l_4389125_4390589_+]; Antisense to CDS [3l_4389125_4390476_+]

TGGAGGTGGTGGTGGAGGAGGGCCGTATCCTGGAGTAGGCTGTGGCTTAGGCGGAGGTGGGCCNGACCCGGTGGTGGAGGAGGGCCGTATCCTGGAGTAGGCTGTGGCTTAGGCGGAGGTGGTGGCGGTGGTGGTCCGTAGCCTGGAGTTGTCTGGGGCCTAGGTGGT ************************************************((..((((.((((..((((((.((((..((....)).)))))))).)).))))...))))..))....************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553487 NRT_0-2 hours eggs	SRR553488 RT_0-2 hours eggs	SRR902009 testis	SRR618934 dsim w501 ovaries	SRR553486 Makindu_3 day-old ovaries	SRR902008 ovaries	SRR1275487 Male larvae
..............................................................................................................................GGTGGAGGTCCGTAGCG.........................	17	2	10	38.50	385	273	110	0	1	1	0	0
..............................................................................................................................GGTGGAGGTCCGTAGC..........................	16	1	4	28.50	114	80	31	3	0	0	0	0
...............................................................................................................................GTGGAGGTCCGTAGC..........................	15	1	5	17.00	85	58	27	0	0	0	0	0
...............................................................................................................................GTGGAGGTCCGTAGCG.........................	16	2	18	4.22	76	55	21	0	0	0	0	0
..............................................................................................................................GGTGGAGGTCCGTAGCGG........................	18	3	20	3.55	71	40	30	0	0	1	0	0
..............................................................................................................................GGTGGAGGTCCGTAGCA.........................	17	2	13	3.38	44	0	0	43	0	0	1	0
.......GGTGGTGGAGGAGGGCC................................................................................................................................................	17	0	2	0.50	1	0	0	0	1	0	0	0
.....................................................................GGTGGTGGAGGAGGGCC..................................................................................	17	0	2	0.50	1	0	0	0	1	0	0	0
............................................................................................................................CCGGTGGAGGTCCGTAGCG.........................	19	3	4	0.25	1	1	0	0	0	0	0	0
..............................................................................................................................GGTGGAGGTCCGTAGCGGG.......................	19	3	9	0.11	1	0	1	0	0	0	0	0
........................................................................................................TGGCTTAGTCGGAGG.................................................	15	1	11	0.09	1	0	0	0	1	0	0	0
..........................................TGGCTTAGTCGGAGG...............................................................................................................	15	1	11	0.09	1	0	0	0	1	0	0	0
...........................................GGCTTAGCCGGAGGTAGG...........................................................................................................	18	2	18	0.06	1	0	0	0	0	1	0	0
............................................................................................................TTAGGCGGTGGTGGTGACA.........................................	19	3	20	0.05	1	0	0	0	0	0	0	1
............................................................................................................................................GCCTAGAGTTGTCTC.............	15	2	20	0.05	1	0	0	0	1	0	0	0

######################################################################################################################################################################## ACCTCCACCACCACCTCCTCCCGGCATAGGACCTCATCCGACACCGAATCCGCCTCCACCCGGNCTGGGCCACCACCTCCTCCCGGCATAGGACCTCATCCGACACCGAATCCGCCTCCACCACCGCCACCACCAGGCATCGGACCTCAACAGACCCCGGATCCACCA ************************************************((..((((.((((..((((((.((((..((....)).)))))))).)).))))...))))..))....************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M023 head	SRR553485 Chicharo_3 day-old ovaries	SRR553487 NRT_0-2 hours eggs	SRR553488 RT_0-2 hours eggs
.....................................................................................................................................CAGGCATCGGACCTCAACA................	19	0	1	1.00	1	1	0	0	0
......ACCACCAACTCCTCCC..................................................................................................................................................	16	1	11	0.09	1	0	1	0	0
.................................................................TGGGCCACCACTTCCG.......................................................................................	16	2	20	0.05	1	0	0	0	1
..................................................................GGGCCCCCCCCTCCTGCC....................................................................................	18	3	20	0.05	1	0	0	1	0

Species	Coordinate	ID	Alignment
droSim2	3l:4389745-4389912 -	dsi_6265	TGGAGGTG------------GTGGTGGA--------------------------------------------------------------------------------------------------------------GGAGGGCCGTATCCTGGAGTAG------GCTGTGGCTTAGGCGGAGGTGGGCCNGACCCGGTGGTGG------AGGAGGGCCGTA-TCCTGGAGTAG------GCTGT-----------------------------------------------------------------------------GGCTTAGGCGGAGGTGGTGGCGGTGGTG--------------------------------------------------------------------------GTCCGTAGCCTGGA------------------G---------------------------------------------------TTGT--------------CTGGGGCCT------------A---------GGTGGT
droSec2	scaffold_2:4426629-4426801 -		CTGTGGCC------------GTGGTGGCTGAGGACGTGGCGGCTGTGGGTCTTGGCGGGCTGTGGTG--------------------------------------------GCTGGCGGAGCGGGTCCAGGTCCTGGTGATGGTCCATATCCTGGAGTGA-----GGCTGGGGCCTTGGTGGAGGTGGT-----GGT---GGAGGAG-----------------------------------------------------------------------------------------------------------------------------------------------------GACCGTATCCTGGAGTAGGCTGTG--------------------------------------------------------------------------------------------------------------------------------------------------------GCTT------------A---------GGCGGA
dm3	chr3L:4437501-4437680 -		GG----TG------------GTGGTGTA--------------------------------------------------------------------------------------------------------------GGAGGGCCGTATCCTGGAGTAG------GCTGTGGCTTAGGCGGAGGTGGT-----GGC---GGTGGTG---------GTCCGTA-GCCAGGAGTTG------GCTGG-------------------------------------------------------------------------------------------------------------------------------------GGCCTAGGTGGTGGTGGTGGAGGCGGCTGAGGACGCGAGGGCGTTGGACGTGGCTTTGGCTGATCTGGAGGCAGGTACTCT-----------------------------------------------------------------------GGCCCA------------------------GGT
droEre2	scaffold_4784:7146294-7146447 -		CTGAGGGC------------GTGGTGGTTGTGGGCTTGGCGGCTG--------------------------------------------------------------TGGTGCTGGAGGGGCGGGTCCAGGTCCCGGTGGCGGTCCATATCCTGGAGTGG------GCTGTGGCCTTGGTGGAGGTGGT-----GGT---GGAGGAG-----------------------------------------------------------------------------------------------------------------------------------------------------GGGCGTATCCTGGAGTAGGTTGTG--------------------------------------------------------------------------------------------------------------------------------------------------------GCTT------------A---------GGCGGA
droYak3	3L:5014874-5015024 -		TGGAGGTG------------GTGGCGGT--------------------------------------------------------------------------------------------------------------GGTGGTCCGTAGCCTGGAGTGG------GCTGTGGCCTAGGTGGTGGTGGT-----GGT---GGAGGCGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCGGACGCGAGGGCGTTGGGCGTGGCTTCGGCTGATCTGGAGGCAGGTACTCC-----------------------------------------------------------------------GGGCCAGGCTGCGGCGAA---------GGTGGC
droEug1	scf7180000409466:2199950-2200112 -		TGGCTGTG------------GAGCTGGAGGA-----------------------------------------------------------------------------------------GCGGG---------CGGTGGTGGTCCGTATCCTGGAGTGG------GTTGCGGCCTTGGTGGAGCTGGA-----GGA---GGTGGTG------------CATA-TCCTGGAGTTG------GCTGT-----------------------------------------------------------------------------GGCCTTGATGGCGCTGGAGGCGGTGGAGCGTAT--------CCAGGAGTTGGCTGTG--------------------------------------------------------------------------------------------------------------------------------------------------------GCCT------------A---------GATGGT
droBia1	scf7180000302428:10031187-10031337 +		CGGAGGTG------------GTGGTGGT--------------------------------------------------------------------------------------------------------------GGAGGTCCATAGCCAGGCGTTG------GCTGGGGCCTTGGTGGCGGTGGT-----GGT---GGCGGCGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAGGACGCGAGGGTGTGGGACGTGGTTTGGGCTGATCTGGAGGCAGGTACTCC-----------------------------------------------------------------------GGTCCAGGCTGTGGGGCT---------GGTGGT
droTak1	scf7180000415941:313529-313691 -		CTGTGGGC------------GTGGTGGCTGAGGGCGGGGAGGCTGAG-GCCTTGG----------------------------------------------------TGGCGCAGGAGGAGCAGGTCCCGG---TGGTGGTGGTCCATAGCCAGGAGTGGGCTGTGGCTGAGGCCTTGGTGGCGGCGGT-----GGT---GGTG--------------------------------------------------------------------------------------------------------------------------------------------------------AATTGTAGCCTGGAGTGGGCTGTG--------------------------------------------------------------------------------------------------------------------------------------------------------GCTT------------T---------GGTGGA
droEle1	scf7180000491249:5327717-5327872 -		TGGAGGAG------------GTGGTGGCG-----------------------------------------------------------------------------------------------------------------------------GAGTGG------GTTGTGGCCTGGGTGCAGGAGGT-----GCA---GGGGGTGG---T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGCAGGTACTCCGGTCCAGGTTGCGGGGATGGAGGCTGTGGCGCCGGAGGCTGTGGTTGTGGTGGTCCATAGGAGGGAGCTGGAGCCG------------A---------GGGAGT
droRho1	scf7180000780120:16557-16726 +		TGGAGAAG------------GAGGTGGTGGT-----------------------------------------------------------------------------------------------------------GGTGGCCCGTATCCAGGAGTGG------GCTGTGGCCTTGGTGGAGATGGT-----GGT---GGTGGTGG------TGGGCCGTAGTCCAGGAGTGG------GCTGTGGCCTTGGTGGAGATGGAGGTGGTGGTGGTG-------------------------------------------------------------------------------GACCGTATCCAGGAGTGGGCTGCG--------------------------------------------------------------------------------------------------------------------------------------------------------GCCT---------CGAC---------GGTGGT
droFic1	scf7180000454065:1149124-1149289 +		TGGCGGTG------------CCGGCGGT--------------------------------------------------------------------------------------------------------------GGAGGTCCGTACTCTGGCGCCG------G------------------AGCT-----GTT---GGCTGCGG---------------------------------------------------------------------CTGAGGAGGCGTCACCTCGTTCTCTCCCGGA-----------------------------------------------------------------------------------------------------------------------------------------GGCGGCAGGTACTCAGCTCCTGGCTGTGGGCGTGGCGGCGGAGGAGGCGGTGGCTGTGGGCGGGTTGG--------------CTGGGGCCT------------T------------GGT
droKik1	scf7180000302486:470503-470658 +		G-CTGGTG------------GTGCCGGC--------------------------------------------------------------------------------------------------------------GGTGGTCCGTATCCAGGAGTGG------GCTGCGGCCTGGGAGGAGACGGC-----GGT---GGTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCGGACGGGAAGGCGTGGGACGCGGCTTGGGCTGATCCGGTGGCAGGTACTCC-----------------------------------------------------------------------GGTCCTGGCTGTGGCGATGGGGGCTGAGTCTGG
droAna3	scaffold_13337:2520745-2520895 -		TGCTGGGG------------GAGCAGGT--------------------------------------------------------------------------------------------------------------GGTGGTCCGTACCCGGGAGTAG------GCTGAGGCCTTGATGGTGGTGGT-----GGT---GGAGGAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGGGGACGCGAGGGAGTTGGTCGTGGCCTGGGCTGATCCGGGGGCAGATACTCC-----------------------------------------------------------------------TGCCCGGGCTGACCCGAA---------GGAGGC
droBip1	scf7180000396741:231839-231986 +		TGGACTAG------------GAGGCTGAGGA---CGTGGTGGCTGAG-GACTTGGTGG----TGAGGGCTGGCTAGGTGGGGGTCCGTACGAAGGAGTAGGCGCGGGTGGAGCTGGGGG---------AGA---AGGTGGAGGTCCGTATCCAGGAGTGG------GCTGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCT---------TGAT---------GGTGGC
dp5	XR_group8:2531428-2531594 -		TCCCGGCG------------GGGATGGT--------------------------------------------------------------------------------------------------------------GGCGGCCCGTATCCGGGAGTGG------GCTGTGGCTGAGGCTGAGGCTGT-----GGC---TGCGGCCTTGGTGGTGGTCCGTA-TCCGGGAGTGGGTTGCGGCTGAGGCTGTGGCTGCGGCTGCGGCCTTGGTGGTG-------------------------------------------------------------------------------GCCCGTATCCGGGAGTGGGCTGTG--------------------------------------------------------------------------------------------------------------------------------------------------------GCT-----------------------------
droPer2	scaffold_798:461-466 -		GA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGC
droWil2	scf2_1100000004515:3267895-3268027 +		TGGTGGTG------------GAGGTGGT--------------------------------------------------------------------------------------------------------------GGTGGGTTGTTGCATGGCGGAG------GCGGTGGTGGAGGAGGAGGTGGA-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAGGTGGTGGTGGTGGTGGAGGT------GGTGGTG---GTGTT-----------------------------------------------------------------------GTTCA---------TGGC---------GGAGGC
droVir3	scaffold_10324:348637-348784 -		TGGAGGTTACGGTGGAGGCGCAGGTGCTGG-----------------------------------------------------------------------------TGGAG------------------------------------------------------CTGGTGGATTTGG--------------------------------------------------------------------------------------------------TGGTGGACCAGGTCGTGGAGGCGCACCAGGAGGTGGCGGTGCTCCAGG--------------------------------------------------------------------------------CTTTGGTGGTGGTGCAGGTGCTGGCGGAGCTGGAGGATTCGGAGG--------------------------------------------------------------------------------------------------C---------GGCGCT
droMoj3	scaffold_6496:2157905-2158067 -		TGGAGCGG------------GTGGTGGTGGAGGCGCT-------------------------------------------------------------------------------------------------------------GGA-CGTGGA--------------------------------------------GGCAGTGC---T------GGAGC-TGGCGGATTTG------G-----------------------------------CGGTGGTGCTGGTGGAGC------------------------------------------CGGTGGTGCTGGAGGCTTT--------GGAGGAGGTG---------------------------CCGGTCGAGGAGGCGCAGGTGGTGCAGGCGGTGCTGGA------------------G---------------------------------------------------C-----------------------------TGGTGGCTTC---------GGTGGT
droGri2	scaffold_15245:15277117-15277267 +		TGGAGGCG------------CTGGTGGAGCTGGCG-----------------------------------------------------------------------------------------------------------------------------------CTGGAGGTTATGG--------------------------------------------------------------------------------------------------TGGTGGCGCAGGAGGTGCTGGAGCCGGAGGTCGTGGCGGTGCCCCCGG--------------------------------------------------------------------------------CTTCGGAGGCGCAGGAGGAGCAGGTGGAGCCGGAGGATTTGGAGGTCGG-----------------------------------------------------------------------------------GGTGGTGCCCCA---------GGAGGA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

TGGAGGTG------------GTGGTGGA--------------------------------------------------------------------------------------------------------------GGAGGGCCGTATCCTGGAGTAG------GCTGTGGCTTAGGCGGAGGTGGGCCNGACCCGGTGGTGG------AGGAGGGCCGTA-TCCTGGAGTAG------GCTGT-----------------------------------------------------------------------------GGCTTAGGCGGAGGTGGTGGCGGTGGTG--------------------------------------------------------------------------GTCCGTAGCCTGGA------------------G---------------------------------------------------TTGT--------------CTGGGGCCT------------A---------GGTGGT	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.......G------------GTGGTGGA--------------------------------------------------------------------------------------------------------------GGAGGGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................	17	2	0.50	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.....................................................................................................................................................................................................GGTGGTGG------AGGAGGGCC........................................................................................................................................................................................................................................................................................................................................................	17	2	0.50	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0

droSec2

CTGTGGCC------------GTGGTGGCTGAGGACGTGGCGGCTGTGGGTCTTGGCGGGCTGTGGTG--------------------------------------------GCTGGCGGAGCGGGTCCAGGTCCTGGTGATGGTCCATATCCTGGAGTGA-----GGCTGGGGCCTTGGTGGAGGTGGT-----GGT---GGAGGAG-----------------------------------------------------------------------------------------------------------------------------------------------------GACCGTATCCTGGAGTAGGCTGTG--------------------------------------------------------------------------------------------------------------------------------------------------------GCTT------------A---------GGCGGA	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
No Reads

dm3

GG----TG------------GTGGTGTA--------------------------------------------------------------------------------------------------------------GGAGGGCCGTATCCTGGAGTAG------GCTGTGGCTTAGGCGGAGGTGGT-----GGC---GGTGGTG---------GTCCGTA-GCCAGGAGTTG------GCTGG-------------------------------------------------------------------------------------------------------------------------------------GGCCTAGGTGGTGGTGGTGGAGGCGGCTGAGGACGCGAGGGCGTTGGACGTGGCTTTGGCTGATCTGGAGGCAGGTACTCT-----------------------------------------------------------------------GGCCCA------------------------GGT	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGGTGGAGGCGGCT.............................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGCTGATCTGGAGGCAGGTAC...........................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
..................................................................................................................................................................................GCGGAGGTGGT-----GGC---GGTGGG......................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGGTGGTGGAGGCGGC..............................................................................................................................................................	20	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGTGGTGGAGGC.................................................................................................................................................................	18	5	0.40	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGTGGTGGAGGCGGC..............................................................................................................................................................	19	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGTGGAGGCGGC..............................................................................................................................................................	18	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGTGGTGGAGGCGG...............................................................................................................................................................	20	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGTGGTGGAGGCGGC..............................................................................................................................................................	21	3	0.33	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGGTGGTGGAGGCG................................................................................................................................................................	18	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGAGGCGGCTGC...........................................................................................................................................................	18	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0

droEre2

CTGAGGGC------------GTGGTGGTTGTGGGCTTGGCGGCTG--------------------------------------------------------------TGGTGCTGGAGGGGCGGGTCCAGGTCCCGGTGGCGGTCCATATCCTGGAGTGG------GCTGTGGCCTTGGTGGAGGTGGT-----GGT---GGAGGAG-----------------------------------------------------------------------------------------------------------------------------------------------------GGGCGTATCCTGGAGTAGGTTGTG--------------------------------------------------------------------------------------------------------------------------------------------------------GCTT------------A---------GGCGGA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
No Reads

droYak3

TGGAGGTG------------GTGGCGGT--------------------------------------------------------------------------------------------------------------GGTGGTCCGTAGCCTGGAGTGG------GCTGTGGCCTAGGTGGTGGTGGT-----GGT---GGAGGCGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCGGACGCGAGGGCGTTGGGCGTGGCTTCGGCTGATCTGGAGGCAGGTACTCC-----------------------------------------------------------------------GGGCCAGGCTGCGGCGAA---------GGTGGC	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGTACTCC-----------------------------------------------------------------------GGGCCAGGCTG......................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0

droEug1

TGGCTGTG------------GAGCTGGAGGA-----------------------------------------------------------------------------------------GCGGG---------CGGTGGTGGTCCGTATCCTGGAGTGG------GTTGCGGCCTTGGTGGAGCTGGA-----GGA---GGTGGTG------------CATA-TCCTGGAGTTG------GCTGT-----------------------------------------------------------------------------GGCCTTGATGGCGCTGGAGGCGGTGGAGCGTAT--------CCAGGAGTTGGCTGTG--------------------------------------------------------------------------------------------------------------------------------------------------------GCCT------------A---------GATGGT	Size	Hit Count	Total Norm	Total
No Reads

droBia1

CGGAGGTG------------GTGGTGGT--------------------------------------------------------------------------------------------------------------GGAGGTCCATAGCCAGGCGTTG------GCTGGGGCCTTGGTGGCGGTGGT-----GGT---GGCGGCGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAGGACGCGAGGGTGTGGGACGTGGTTTGGGCTGATCTGGAGGCAGGTACTCC-----------------------------------------------------------------------GGTCCAGGCTGTGGGGCT---------GGTGGT	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CTGTGGGC------------GTGGTGGCTGAGGGCGGGGAGGCTGAG-GCCTTGG----------------------------------------------------TGGCGCAGGAGGAGCAGGTCCCGG---TGGTGGTGGTCCATAGCCAGGAGTGGGCTGTGGCTGAGGCCTTGGTGGCGGCGGT-----GGT---GGTG--------------------------------------------------------------------------------------------------------------------------------------------------------AATTGTAGCCTGGAGTGGGCTGTG--------------------------------------------------------------------------------------------------------------------------------------------------------GCTT------------T---------GGTGGA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

TGGAGGAG------------GTGGTGGCG-----------------------------------------------------------------------------------------------------------------------------GAGTGG------GTTGTGGCCTGGGTGCAGGAGGT-----GCA---GGGGGTGG---T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGGCAGGTACTCCGGTCCAGGTTGCGGGGATGGAGGCTGTGGCGCCGGAGGCTGTGGTTGTGGTGGTCCATAGGAGGGAGCTGGAGCCG------------A---------GGGAGT	Size	Hit Count	Total Norm	Total
No Reads

droRho1

TGGAGAAG------------GAGGTGGTGGT-----------------------------------------------------------------------------------------------------------GGTGGCCCGTATCCAGGAGTGG------GCTGTGGCCTTGGTGGAGATGGT-----GGT---GGTGGTGG------TGGGCCGTAGTCCAGGAGTGG------GCTGTGGCCTTGGTGGAGATGGAGGTGGTGGTGGTG-------------------------------------------------------------------------------GACCGTATCCAGGAGTGGGCTGCG--------------------------------------------------------------------------------------------------------------------------------------------------------GCCT---------CGAC---------GGTGGT	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TGGCGGTG------------CCGGCGGT--------------------------------------------------------------------------------------------------------------GGAGGTCCGTACTCTGGCGCCG------G------------------AGCT-----GTT---GGCTGCGG---------------------------------------------------------------------CTGAGGAGGCGTCACCTCGTTCTCTCCCGGA-----------------------------------------------------------------------------------------------------------------------------------------GGCGGCAGGTACTCAGCTCCTGGCTGTGGGCGTGGCGGCGGAGGAGGCGGTGGCTGTGGGCGGGTTGG--------------CTGGGGCCT------------T------------GGT	Size	Hit Count	Total Norm	Total
No Reads

droKik1

G-CTGGTG------------GTGCCGGC--------------------------------------------------------------------------------------------------------------GGTGGTCCGTATCCAGGAGTGG------GCTGCGGCCTGGGAGGAGACGGC-----GGT---GGTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCGGACGGGAAGGCGTGGGACGCGGCTTGGGCTGATCCGGTGGCAGGTACTCC-----------------------------------------------------------------------GGTCCTGGCTGTGGCGATGGGGGCTGAGTCTGG	Size	Hit Count	Total Norm	Total
No Reads

droAna3

TGCTGGGG------------GAGCAGGT--------------------------------------------------------------------------------------------------------------GGTGGTCCGTACCCGGGAGTAG------GCTGAGGCCTTGATGGTGGTGGT-----GGT---GGAGGAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGGGGACGCGAGGGAGTTGGTCGTGGCCTGGGCTGATCCGGGGGCAGATACTCC-----------------------------------------------------------------------TGCCCGGGCTGACCCGAA---------GGAGGC	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.......................................................................................................................................................................................GGTGGT-----GGT---GGAGGAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C..............................................................................................................................................................	18	6	0.17	1	1	0	0	0	0	0

droBip1

TGGACTAG------------GAGGCTGAGGA---CGTGGTGGCTGAG-GACTTGGTGG----TGAGGGCTGGCTAGGTGGGGGTCCGTACGAAGGAGTAGGCGCGGGTGGAGCTGGGGG---------AGA---AGGTGGAGGTCCGTATCCAGGAGTGG------GCTGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCT---------TGAT---------GGTGGC	Size	Hit Count	Total Norm	Total
No Reads

dp5

TCCCGGCG------------GGGATGGT--------------------------------------------------------------------------------------------------------------GGCGGCCCGTATCCGGGAGTGG------GCTGTGGCTGAGGCTGAGGCTGT-----GGC---TGCGGCCTTGGTGGTGGTCCGTA-TCCGGGAGTGGGTTGCGGCTGAGGCTGTGGCTGCGGCTGCGGCCTTGGTGGTG-------------------------------------------------------------------------------GCCCGTATCCGGGAGTGGGCTGTG--------------------------------------------------------------------------------------------------------------------------------------------------------GCT-----------------------------

Size

Hit Count

Total Norm

Total

M022
Male-body

M040
Female-body

M059
Embryo

M062
Head

V043
Embryo

V051
Head

V112
Male-body

SRR902010
Ovary

SRR902011
Testis

SRR902012
CNS imaginal disc

No Reads

droPer2

GA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGC	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
No Reads

droWil2

TGGTGGTG------------GAGGTGGT--------------------------------------------------------------------------------------------------------------GGTGGGTTGTTGCATGGCGGAG------GCGGTGGTGGAGGAGGAGGTGGA-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAGGTGGTGGTGGTGGTGGAGGT------GGTGGTG---GTGTT-----------------------------------------------------------------------GTTCA---------TGGC---------GGAGGC	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGGTGGTGGTGGAGGT------GGTGG..................................................................................................................	25	4	5.25	21	0	1	5	1	14
.............................................................................................................................................................GAG------GCGGTGGTGGAGGAGGAGGTGGA-----G.................................................................................................................................................................................................................................................................................................................................................................................	27	1	4.00	4	0	0	4	0	0
..................................................................................................................................................................................GAGGAGGTGGA-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGA...........................................................................................................................................................	26	1	3.00	3	0	1	2	0	0
.............................................................................................................................................................GAG------GCGGTGGTGGAGGAGGAGGTGGA-----..................................................................................................................................................................................................................................................................................................................................................................................	26	1	3.00	3	0	1	2	0	0
...........................................................................................................................................................................................GA-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGG...................................................................................................................................................	25	2	2.50	5	0	2	1	0	2
......................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGGTGGTGGAGGT------GGTGGTG---G............................................................................................................	25	4	2.25	9	0	0	3	1	5
.........................................................................................................................................................................GTGGTGGAGGAGGAGGTGGA-----GGT---G...........................................................................................................................................................................................................................................................................................................................................................................	24	3	2.00	6	0	1	0	0	5
..................................................................................................................................................................................GAGGAGGTGGA-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGG............................................................................................................................................................	25	1	2.00	2	0	0	1	0	1
.........................................................................................................................................................................................................GTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAGGTG..............................................................................................................................................	24	3	2.00	6	0	1	0	0	5
..........................................................................................................................................................GCGGAG------GCGGTGGTGGAGGAGGAGGTG.........................................................................................................................................................................................................................................................................................................................................................................................	27	1	2.00	2	0	0	2	0	0
...........................................................................................................................................................................................................GGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAGGTGGTG...........................................................................................................................................	25	3	1.67	5	0	1	2	0	2
.........................................................................................................................................................................................................GTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAGGTGGTG...........................................................................................................................................	27	3	1.67	5	0	0	5	0	0
...........................................................................................................................................................................GGTGGAGGAGGAGGTGGA-----GGT---GGTG........................................................................................................................................................................................................................................................................................................................................................................	25	3	1.67	5	0	1	2	0	2
.........................................................................................................................................................................GTGGTGGAGGAGGAGGTGGA-----GGT---GGTG........................................................................................................................................................................................................................................................................................................................................................................	27	3	1.67	5	0	0	5	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGTGGAGGTGGTGGTGGTGGT...................................................................................................................................	26	2	1.50	3	0	1	2	0	0
...........................................................................................................................................................................................GA-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGA..................................................................................................................................................	26	2	1.50	3	0	0	3	0	0
...........................................................................................................................................................................GGTGGAGGAGGAGGTGGA-----GGT---GGT.........................................................................................................................................................................................................................................................................................................................................................................	24	3	1.33	4	0	0	3	0	1
............................................................................................................................................................................GTGGAGGAGGAGGTGGA-----GGT---GGTGGT......................................................................................................................................................................................................................................................................................................................................................................	26	3	1.33	4	0	0	4	0	0
............................................................................................................................................................................................................GTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAGGTGGTGGT.........................................................................................................................................	26	3	1.33	4	0	0	4	0	0
.........................................................................................................................................................................................................GTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAGGTGG.............................................................................................................................................	25	3	1.33	4	0	0	3	0	1
...........................................................................................................................................................................................................GGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAGGTGGT............................................................................................................................................	24	3	1.33	4	0	0	3	0	1
.........................................................................................................................................................................GTGGTGGAGGAGGAGGTGGA-----GGT---GGT.........................................................................................................................................................................................................................................................................................................................................................................	26	3	1.33	4	0	1	2	0	1
................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTGGTGGTGGTGGTGGAGGT------GG.....................................................................................................................	25	3	1.33	4	0	2	1	0	1
.........................................................................................................................................................................GTGGTGGAGGAGGAGGTGGA-----GGT---GG..........................................................................................................................................................................................................................................................................................................................................................................	25	3	1.33	4	0	0	3	0	1
.........................................................................................................................................................................................................GTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAGGTGGT............................................................................................................................................	26	3	1.33	4	0	1	2	0	1
...............................................................................................................................................................................GAGGAGGAGGTGGA-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A..............................................................................................................................................................	26	1	1.00	1	0	0	1	0	0
......TG------------GAGGTGGT--------------------------------------------------------------------------------------------------------------GGTGGGTTG.................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1
.............................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTGGTGGTGGTGGTGGAGG..............................................................................................................................	25	3	1.00	3	0	0	1	0	2
..........................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTGGAGGTGGTGGTGGTGGTGG.................................................................................................................................	25	2	1.00	2	0	0	1	0	1
......................GGTGGT--------------------------------------------------------------------------------------------------------------GGTGGGTTGTTGCATGG.........................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0
.GGTGGTG------------GAGGTGGT--------------------------------------------------------------------------------------------------------------GGTGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0
.............................................................................................................................................................GAG------GCGGTGGTGGAGGAGGAGGTGG........................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0
........................................................................................................................................................TGGCGGAG------GCGGTGGTGGAGGAGGAG............................................................................................................................................................................................................................................................................................................................................................................................	26	2	1.00	2	0	1	1	0	0
.........................................................................................................................................................GGCGGAG------GCGGTGGTGGAGGAGGA.............................................................................................................................................................................................................................................................................................................................................................................................	24	2	1.00	2	0	2	0	0	0
.......................................................................................................................................................................CGGTGGTGGAGGAGGAGGTGGA-----GGT---G...........................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	1
..GTGGTG------------GAGGTGGT--------------------------------------------------------------------------------------------------------------GGTGGGTTG.................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1
...............................................................................................................................................................G------GCGGTGGTGGAGGAGGAGGTGGA-----..................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGTGGAGGTGGTGGTGGTGGT...................................................................................................................................	25	2	1.00	2	0	0	2	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTGGAGGTGGTGGTGGTGGTGGA................................................................................................................................	26	2	1.00	2	0	0	1	0	1
..............................................................................................................................................................AG------GCGGTGGTGGAGGAGGAGGTGG........................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1
...................................................................................................................................................................................................GT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAGGTGG.............................................................................................................................................	28	2	1.00	2	0	0	2	0	0
...................................................................................................................................................................................................GT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAGG................................................................................................................................................	25	2	1.00	2	0	0	2	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTGGTGGTGGTGGTGGAGGT------G......................................................................................................................	24	3	1.00	3	0	0	0	0	3
............................................................................................................................................................................................A-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAG.................................................................................................................................................	26	2	1.00	2	0	0	2	0	0
..................................................................................................................................................................................GAGGAGGTGGA-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A..............................................................................................................................................................	23	1	1.00	1	0	0	0	1	0
....................................................................................................................................................TGCATGGCGGAG------GCGGTGGTGG....................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1
................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTGGTGGTGGTGGTGGAGGT------GGT....................................................................................................................	26	2	1.00	2	0	1	1	0	0
...................................................................................................................................................................................AGGAGGTGGA-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAG..........................................................................................................................................................	26	1	1.00	1	0	0	1	0	0
......................................................................................................................................................................GCGGTGGTGGAGGAGGAGGTGGA-----GGT---GG..........................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	1	0	0
....................................................................................................................................................TGCATGGCGGAG------GCGGTGGT......................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1
.......................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGTGGAGGTGGTGGTGGTGG....................................................................................................................................	25	2	1.00	2	0	0	2	0	0
......................................................................................................................................................................GCGGTGGTGGAGGAGGAGGTGGA-----GG................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0
..................................................................................................................................................................................GAGGAGGTGGA-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAG..........................................................................................................................................................	27	1	1.00	1	0	0	1	0	0
..............................................................................................................................................................AG------GCGGTGGTGGAGGAGGAGGTGA........................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1
..........................................................................................................................................................................................GGA-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTG....................................................................................................................................................	25	2	1.00	2	0	1	0	0	1
.GGTGGTG------------GAGGTGGT--------------------------------------------------------------------------------------------------------------GGTGGGTTG.................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGTGGTGGAGGT------GGTGGT.................................................................................................................	24	4	1.00	4	0	0	0	0	4
.......................................................................................................................................................................CGGTGGTGGAGGAGGAGGTGGA-----GGT---GG..........................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGGTGGTGGTGGAGGT------GGTGGT.................................................................................................................	26	3	0.67	2	0	0	1	0	1
............................................................................................................................................................................................................GTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAGGTGGT............................................................................................................................................	23	3	0.67	2	0	1	0	0	1
........................................................................................................................................................................................................GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAGGTG..............................................................................................................................................	25	3	0.67	2	0	0	2	0	0
........................................................................................................................................................................................GTGGA-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGG......................................................................................................................................................	25	3	0.67	2	0	0	2	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGGTGGTGGTGGAGGT------GGTGGTG---.............................................................................................................	27	3	0.67	2	0	0	2	0	0
........................................................................................................................................................................GGTGGTGGAGGAGGAGGTGGA-----GGT---G...........................................................................................................................................................................................................................................................................................................................................................................	25	3	0.67	2	0	0	2	0	0
............................................................................................................................................................................GTGGAGGAGGAGGTGGA-----GGT---GGT.........................................................................................................................................................................................................................................................................................................................................................................	23	3	0.67	2	0	1	0	0	1
........................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGTGGAGGT------GGTGGTG---G............................................................................................................	23	5	0.60	3	0	1	1	0	1
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGTGGTGGAGGT------GGTGG..................................................................................................................	23	7	0.57	4	0	0	0	0	4
..........................................................................................................................................................GCGGAG------GCGGTGGTGGAGGAGGAG............................................................................................................................................................................................................................................................................................................................................................................................	24	2	0.50	1	0	1	0	0	0
.........................................................................................................................................................................................TGGA-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTG....................................................................................................................................................	26	2	0.50	1	0	0	1	0	0
.........................................................................................................................................................................................TGGA-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGT.....................................................................................................................................................	25	2	0.50	1	0	0	1	0	0
........................................................................................................................................................................................GTGGA-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTG....................................................................................................................................................	27	2	0.50	1	0	0	1	0	0
...........................................................................................................................................................................................................GGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAGGTGG.............................................................................................................................................	23	4	0.50	2	0	0	2	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGTGGAGGTGGTGGTGGT......................................................................................................................................	21	2	0.50	1	0	0	0	0	1
....................................................................................................................................................................................GGAGGTGGA-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGA...........................................................................................................................................................	24	2	0.50	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGGAGGTGGTGGTGGTGGTGGAG...............................................................................................................................	26	2	0.50	1	0	0	1	0	0
....................................................................................................................................................................................................T---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAGG................................................................................................................................................	24	2	0.50	1	0	0	0	0	1
.......................................................................................................................................................ATGGCGGAG------GCGGTGGTGGAGGAGGA.............................................................................................................................................................................................................................................................................................................................................................................................	26	2	0.50	1	0	0	1	0	0
.......................................................................................................................................................ATGGCGGAG------GCGGTGGTGGAGGAGGAG............................................................................................................................................................................................................................................................................................................................................................................................	27	2	0.50	1	0	0	1	0	0
......................................................................................................................................................................GCGGTGGTGGAGGAGGAGGTGGA-----GGT---A...........................................................................................................................................................................................................................................................................................................................................................................	27	2	0.50	1	0	0	1	0	0
...........................................................................................................................................................................................GA-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAG.................................................................................................................................................	27	2	0.50	1	0	0	1	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGTGGTGGTGGTGGTGGAGG..............................................................................................................................	23	4	0.50	2	0	2	0	0	0
...........................................................................................................................................................CGGAG------GCGGTGGTGGAGGAGGAGG...........................................................................................................................................................................................................................................................................................................................................................................................	24	2	0.50	1	0	1	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGGTGGTGGTGGTGGAGGT------GGTG...................................................................................................................	26	2	0.50	1	0	0	1	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGGTGGTGGAGGT------GGTGGTG---.............................................................................................................	24	4	0.50	2	0	0	0	0	2
.......................................................................................................................................................ATGGCGGAG------GCGGTGGTGGAGGAGG..............................................................................................................................................................................................................................................................................................................................................................................................	25	2	0.50	1	0	0	1	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTGGAGGTGGTGGTGGTGGT...................................................................................................................................	23	2	0.50	1	0	1	0	0	0
..........................................................................................................................................................GCGGAG------GCGGTGGTGGAGGAGGAGG...........................................................................................................................................................................................................................................................................................................................................................................................	25	2	0.50	1	0	0	0	0	1
...........................................................................................................................................................................................GA-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTG....................................................................................................................................................	24	2	0.50	1	0	0	1	0	0
.....................................................................................................................................................................................GAGGTGGA-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGA........................................................................................................................................................	26	2	0.50	1	0	1	0	0	0
...........................................................................................................................................................................GGTGGAGGAGGAGGTGGA-----GGT---GG..........................................................................................................................................................................................................................................................................................................................................................................	23	4	0.50	2	0	0	2	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGTGGAGGTGGTGGTGGT......................................................................................................................................	22	2	0.50	1	0	0	1	0	0
.....................................................................................................................................................................................GAGGTGGA-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------...............................................................................................................................................................	19	5	0.40	2	0	0	1	0	1
..........................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTGGAGGTGGTGGTGG.......................................................................................................................................	19	5	0.40	2	0	0	1	0	1
.................................................................................................................................................................................GGAGGAGGTGGA-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------...............................................................................................................................................................	23	3	0.33	1	0	1	0	0	0
........................................................................................................................................................................GGTGGTGGAGGAGGAGGTGGA-----GGT---GGT.........................................................................................................................................................................................................................................................................................................................................................................	27	3	0.33	1	0	0	1	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTGGTGGTGGTGGTGGAG...............................................................................................................................	24	3	0.33	1	0	1	0	0	0
...............................................................................................................................................................................GAGGAGGAGGTGGA-----GGT---GGTGGTG.....................................................................................................................................................................................................................................................................................................................................................................	24	3	0.33	1	0	1	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGTGGAGGTGGTGGTGG.......................................................................................................................................	22	3	0.33	1	0	1	0	0	0
..........................................................................................................................................................................TGGTGGAGGAGGAGGTGGA-----GGT---GGT.........................................................................................................................................................................................................................................................................................................................................................................	25	3	0.33	1	0	1	0	0	0
..................................................................................................................................................................................................GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGA..................................................................................................................................................	24	3	0.33	1	0	1	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGTGGTGGTGGAGGT------GGTGGT.................................................................................................................	25	3	0.33	1	0	0	0	0	1
..............................................................................................................................................................................................................GG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAGGTGGTGGT.........................................................................................................................................	24	3	0.33	1	0	1	0	0	0
...............................................................................................................................................................................GAGGAGGAGGTGGA-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------...............................................................................................................................................................	25	3	0.33	1	0	1	0	0	0
............................................................................................................................................................................GTGGAGGAGGAGGTGGA-----GGT---GGTGGTG.....................................................................................................................................................................................................................................................................................................................................................................	27	3	0.33	1	0	0	1	0	0
...........................................................................................................................................................CGGAG------GCGGTGGTGGAGGA................................................................................................................................................................................................................................................................................................................................................................................................	19	3	0.33	1	0	1	0	0	0
.........................................................................................................................................................GGCGGAG------GCGGTGGTGGAGGAGG..............................................................................................................................................................................................................................................................................................................................................................................................	23	3	0.33	1	0	0	0	0	1
..........................................................................................................................................................................TGGTGGAGGAGGAGGTGGA-----GGT---GGTG........................................................................................................................................................................................................................................................................................................................................................................	26	3	0.33	1	0	0	0	1	0
............................................................................................................................................................................................................GTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAGGTGGTGGTG........................................................................................................................................	27	3	0.33	1	0	0	1	0	0
............................................................................................................................................................................................A-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGG...................................................................................................................................................	24	3	0.33	1	0	0	1	0	0
..........................................................................................................................................................................................................TGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAGGTGGT............................................................................................................................................	25	3	0.33	1	0	1	0	0	0
........................................................................................................................................................................................GTGGA-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAG.......................................................................................................................................................	24	3	0.33	1	0	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAGGTGGTGGTGGTGGTGGA................................................................................................................................	24	3	0.33	1	0	0	1	0	0
.......................................................................................................................................................................................GGTGGA-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGA........................................................................................................................................................	24	3	0.33	1	0	1	0	0	0
...................................................................................................................................................................................................GT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGA..................................................................................................................................................	23	3	0.33	1	0	1	0	0	0
..........................................................................................................................................................................................................TGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAGGTGG.............................................................................................................................................	24	3	0.33	1	0	0	0	0	1
..................................................................................................................................................................................GAGGAGGTGGA-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------...............................................................................................................................................................	22	3	0.33	1	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGGTGGTGGTGGAGGT------GGTG...................................................................................................................	24	6	0.33	2	0	0	0	0	2
......................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGAGGTGGAGGTGGTGGTGG.......................................................................................................................................	23	3	0.33	1	0	1	0	0	0
............................................................................................................................................................................GTGGAGGAGGAGGTGGA-----GGT---GGTGG.......................................................................................................................................................................................................................................................................................................................................................................	25	3	0.33	1	0	0	1	0	0
...............................................................................................................................................................................................................G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAGGTGGTGGTGG.......................................................................................................................................	25	3	0.33	1	0	1	0	0	0
..............................................................................................................................................................................GGAGGAGGAGGTGGA-----GGT---GGTGGT......................................................................................................................................................................................................................................................................................................................................................................	24	3	0.33	1	0	1	0	0	0
...............................................................................................................................................................................................................G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAGGTGGTGGTG........................................................................................................................................	24	3	0.33	1	0	1	0	0	0
............................................................................................................................................................................................................GTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAGGTGGTGG..........................................................................................................................................	25	3	0.33	1	0	0	1	0	0
........................................................................................................................................................................................................GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAGGTGGT............................................................................................................................................	27	3	0.33	1	0	0	1	0	0
........................................................................................................................................................................................................GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAGGTGA.............................................................................................................................................	26	3	0.33	1	0	0	1	0	0
.......................................................................................................................................................................................GGTGGA-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGA...........................................................................................................................................................	21	3	0.33	1	0	1	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGTGGAGGTGGTGGTGGTGGTA..................................................................................................................................	27	3	0.33	1	0	0	1	0	0
..........................................................................................................................................................................................................TGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAGGTGGTG...........................................................................................................................................	26	3	0.33	1	0	0	0	1	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTGGTGGTGGTGGTGGAGGT------G......................................................................................................................	27	3	0.33	1	0	0	1	0	0
..........................................................................................................................................................................TGGTGGAGGAGGAGGTGGA-----GGT---GG..........................................................................................................................................................................................................................................................................................................................................................................	24	3	0.33	1	0	0	0	0	1
.............................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTGGTGGTGGTGGTGGAGGT------.......................................................................................................................	26	3	0.33	1	0	0	1	0	0
........................................................................................................................................................................GGTGGTGGAGGAGGAGGTGGA-----GGT---GA..........................................................................................................................................................................................................................................................................................................................................................................	26	3	0.33	1	0	0	1	0	0
.........................................................................................................................................................................GTGGTGGAGGAGGAGGTGGA-----..................................................................................................................................................................................................................................................................................................................................................................................	20	4	0.25	1	0	0	1	0	0
........................................................................................................................................................................GGTGGTGGAGGAGGAGGT..........................................................................................................................................................................................................................................................................................................................................................................................	18	8	0.25	2	0	0	2	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGTGGTGGTGGAGGT------GGTGG..................................................................................................................	26	4	0.25	1	0	0	0	1	0
...........................................................................................................................................................................................................GGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAGGTGGTA...........................................................................................................................................	25	4	0.25	1	0	0	1	0	0
............................................................................................................................................................................................................GTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAGGTGG.............................................................................................................................................	22	4	0.25	1	0	1	0	0	0
........................................................................................................................................................................................................GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGT.....................................................................................................................................................	18	8	0.25	2	0	0	2	0	0
.........................................................................................................................................................................................................GTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGA..................................................................................................................................................	20	4	0.25	1	0	0	1	0	0
...........................................................................................................................................................................GGTGGAGGAGGAGGTGGA-----GGT---GGTA........................................................................................................................................................................................................................................................................................................................................................................	25	4	0.25	1	0	0	1	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGTGGTGGAGGT------GGTGGTG---.............................................................................................................	23	4	0.25	1	0	0	0	0	1
............................................................................................................................................................................GTGGAGGAGGAGGTGGA-----GGT---GG..........................................................................................................................................................................................................................................................................................................................................................................	22	4	0.25	1	0	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGTGGTGGAGGT------GGTGGTG---.............................................................................................................	25	4	0.25	1	0	0	0	0	1
.GGTGGTG------------GAGGTGGT--------------------------------------------------------------------------------------------------------------GGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................	18	15	0.20	3	0	1	1	0	1
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGAGGT------GGTGGT.................................................................................................................	18	15	0.20	3	0	1	1	0	1
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGTGGAGGT------GGTGGTG---G............................................................................................................	21	6	0.17	1	0	0	0	0	1
........................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGTGGAGGT------GGTGGT.................................................................................................................	21	6	0.17	1	0	0	0	0	1
TGGTGGTG------------GAGGTGGT--------------------------------------------------------------------------------------------------------------GGTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................	21	6	0.17	1	0	0	0	0	1
........................................................................................................................................................................................GTGGA-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG.............................................................................................................................................................	18	6	0.17	1	0	1	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGTGGTGGTGGAGGT------GGTG...................................................................................................................	23	6	0.17	1	0	1	0	0	0
..................................................................................................................................................................................................GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGG...................................................................................................................................................	23	6	0.17	1	0	0	0	0	1
...................................................................................................................................................................................................GT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGG...................................................................................................................................................	22	6	0.17	1	0	0	1	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGTGGTGGAGGT------GGTGGTA---.............................................................................................................	25	14	0.14	2	0	0	0	0	2
............................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAGGTGGTGGTGGTGGTGG.................................................................................................................................	23	7	0.14	1	0	0	0	0	1
...................................................................................................................................................................................................GT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGG......................................................................................................................................................	19	16	0.13	2	0	0	0	0	2
..................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGTGGTGGTGGAGGT------GGT....................................................................................................................	24	8	0.13	1	0	0	1	0	0
...........................................................................................................................................................................................GA-----GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGA........................................................................................................................................................	20	8	0.13	1	0	0	1	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTGGTGGTGGTGGTGG.................................................................................................................................	22	8	0.13	1	0	1	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGTGGAGGT------GGTGGTG---.............................................................................................................	20	9	0.11	1	0	1	0	0	0
TGGTGGTG------------GAGGTGGT--------------------------------------------------------------------------------------------------------------GGTG......................................................................................................................................................................................................................................................................................................................................................................................................................................	20	9	0.11	1	0	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAGGTGGTGGTGGTGGTG..................................................................................................................................	22	10	0.10	1	0	0	0	0	1
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGTGGAGGT------GGTGGT.................................................................................................................	19	10	0.10	1	0	0	0	0	1
TGGTGGTG------------GAGGTGGT--------------------------------------------------------------------------------------------------------------GGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................	19	10	0.10	1	0	0	0	0	1
..................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGTGGTGGTGGAGGT------GG.....................................................................................................................	23	11	0.09	1	0	0	0	0	1
......................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGGTGGTGGAGGT------GGTGGTG---GA...........................................................................................................	26	11	0.09	1	0	0	1	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGGTGGTGGTGGAGGT------GG.....................................................................................................................	22	11	0.09	1	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGTGGAGGT------GGTGGTG---GTT..........................................................................................................	25	12	0.08	1	0	0	0	0	1
........................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGTGGAGGT------GGTGG..................................................................................................................	20	12	0.08	1	0	0	0	0	1
...................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGGTGGTGGTGGAGGT------GGTGA..................................................................................................................	25	12	0.08	1	0	0	0	0	1
...........................................................................................................................................................................GGTGGAGGAGGAGGTGGA-----..................................................................................................................................................................................................................................................................................................................................................................................	18	14	0.07	1	0	0	1	0	0
...........................................................................................................................................................................................................GGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGA..................................................................................................................................................	18	14	0.07	1	0	0	1	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGTGGTGGTGGAGGT------G......................................................................................................................	20	17	0.06	1	0	0	0	0	1
............................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAGGTGGTGGTGGT......................................................................................................................................	18	18	0.06	1	0	0	1	0	0
..............................................................................................................................................................................................................GG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAGGTGGAGGT...............................................................................................................................................	18	18	0.06	1	0	1	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAGGT------GGTGGTG---GT...........................................................................................................	18	18	0.06	1	0	0	1	0	0
..............................................................................................................................................................................GGAGGAGGAGGTGGA-----GGT---............................................................................................................................................................................................................................................................................................................................................................................	18	18	0.06	1	0	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGTGGTGGAGGT------G......................................................................................................................	19	20	0.05	1	0	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGTGGTGGAGGT------.......................................................................................................................	18	20	0.05	1	0	0	0	0	1
..................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGTGGTGGTGGAG...............................................................................................................................	19	20	0.05	1	0	1	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGTGGTGGTGGTGGT...................................................................................................................................	18	20	0.05	1	0	1	0	0	0
..................................................................................................................................................................................................GGT---GGTGGTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAGGAG.......................................................................................................................................................	19	20	0.05	1	0	0	0	0	1

droVir3

TGGAGGTTACGGTGGAGGCGCAGGTGCTGG-----------------------------------------------------------------------------TGGAG------------------------------------------------------CTGGTGGATTTGG--------------------------------------------------------------------------------------------------TGGTGGACCAGGTCGTGGAGGCGCACCAGGAGGTGGCGGTGCTCCAGG--------------------------------------------------------------------------------CTTTGGTGGTGGTGCAGGTGCTGGCGGAGCTGGAGGATTCGGAGG--------------------------------------------------------------------------------------------------C---------GGCGCT	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
........................................................................................................................................................................................................................................................................................TGGACCAGGTCGTGGAGGCG........................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.................................................................................................................................................................................................................................................................................................................GGAGGTGGCGGTGCTCCA.................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................GG-----------------------------------------------------------------------------TGGAG------------------------------------------------------CTGGTGGATTTGG--------------------------------------------------------------------------------------------------TG.............................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......TTACGGTGGAGGCGCAGGTGCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGAGGATTCGGAGG--------------------------------------------------------------------------------------------------C---------......	18	2	0.50	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGAGGATTCGGAGG--------------------------------------------------------------------------------------------------C---------G.....	18	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0

droMoj3

TGGAGCGG------------GTGGTGGTGGAGGCGCT-------------------------------------------------------------------------------------------------------------GGA-CGTGGA--------------------------------------------GGCAGTGC---T------GGAGC-TGGCGGATTTG------G-----------------------------------CGGTGGTGCTGGTGGAGC------------------------------------------CGGTGGTGCTGGAGGCTTT--------GGAGGAGGTG---------------------------CCGGTCGAGGAGGCGCAGGTGGTGCAGGCGGTGCTGGA------------------G---------------------------------------------------C-----------------------------TGGTGGCTTC---------GGTGGT	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
...AGCGG------------GTGGTGGTGGAGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0
..............................................................................................................................................................................................................................C-TGGCGGATTTG------G-----------------------------------CGGTGGCAG......................................................................................................................................................................................................................................................................................	22	8	0.13	1	0	1	0	0	0	0

droGri2

TGGAGGCG------------CTGGTGGAGCTGGCG-----------------------------------------------------------------------------------------------------------------------------------CTGGAGGTTATGG--------------------------------------------------------------------------------------------------TGGTGGCGCAGGAGGTGCTGGAGCCGGAGGTCGTGGCGGTGCCCCCGG--------------------------------------------------------------------------------CTTCGGAGGCGCAGGAGGAGCAGGTGGAGCCGGAGGATTTGGAGGTCGG-----------------------------------------------------------------------------------GGTGGTGCCCCA---------GGAGGA	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
.............................................................................................................................................................................................................................................................................................................CGGAGGTCGTGGCGGTGCCCCCGG--------------------------------------------------------------------------------C..............................................................................................................................................................	25	1	1.00	1	0	1

dsi_6265

3l:4389795-4389862 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads