ID:

dsi_6264

 Coordinate:

2r:10529434-10529583 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.8 -12.8 -12.8

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CGGATAACCGTGCAGTTCGATCCATTCGCGGAAAACGTCAAGTCCACACGGTGAGTCGGAAAAGCGCTTTTCACCGATACCGATAGCGGGGCATGCGCACAACATCCCCTATTCACCACTCGAATTGGATAGAATTTTCACGAAACCGAAAGGAAAAAGAAAACCATACGAAGTAGAAACTGAGGAAAACCAAAAAGGGTGCAGTGAAGTATTCACACCAGAAAAACCGATCCTTCGAGGGCTAAAAAGG
************************************************************************.(((((..(((....((((.(((.......)))))))..........))).)))))......(((((......((....)).....)))))..................********************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 M025
embryo
 O001
Testis
 M023
head
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
..............GTTCGATCCATTCGCGGG.......................................................................................................................................................................................................................... 18 1 1 1.00 1 0 0 0 0 1 0 0 0 0 0
........................................................................ACCGATACCGATAGCGGGGCA............................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................CGCACAACATCCCCTATT......................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.................CGATCCATTCGCGGAAAACGTC................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................GAGGAAAACCAAAAAGGGTGC................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........................GCGGAAAACGTCAAGTCCACACGGGA..................................................................................................................................................................................................... 26 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..........................................................GAAAAGCGCTTTTCACCGATA........................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................AAAAACCCAGCCTTCGTGGGCT....... 22 3 1 1.00 1 0 0 0 0 0 0 0 1 0 0
....................TCCATTCGCGGAAAACGTCAAGTC.............................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............GTTCGATCCATTCGCGGAA......................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.................................................................................................................................................................AACCATACGAAGTAGAAACT..................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.........GTGCAGTTCGATCCATTCGCGG........................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................GCCGATAGCGGGGCATGCGCA....................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................GTAGAAACTGAGGAAAACCAA......................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................GAAAACCATACGAAGTAGAAACTGAGG................................................................. 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
............CAGTTCGATCCATTCGCGGAA......................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...............................................ACGGTGAGTCGGAAAAGCGCT...................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...................................................TGAGTCGGAAAAGCGCTTTTC.................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................TAAGAAGTAGAATTTGAGGAA............................................................... 21 3 9 0.11 1 0 0 0 0 0 0 0 0 1 0
.................................................................................................................................................................CACCATACGAAGTGGAAACG..................................................................... 20 3 10 0.10 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AGTAGAACCTGCGGAA............................................................... 16 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................AGGGGTGCAGTGGAGTTTT..................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

GCCTATTGGCACGTCAAGCTAGGTAAGCGCCTTTTGCAGTTCAGGTGTGCCACTCAGCCTTTTCGCGAAAAGTGGCTATGGCTATCGCCCCGTACGCGTGTTGTAGGGGATAAGTGGTGAGCTTAACCTATCTTAAAAGTGCTTTGGCTTTCCTTTTTCTTTTGGTATGCTTCATCTTTGACTCCTTTTGGTTTTTCCCACGTCACTTCATAAGTGTGGTCTTTTTGGCTAGGAAGCTCCCGATTTTTCC
*********************************************************************.(((((..(((....((((.(((.......)))))))..........))).)))))......(((((......((....)).....)))))..................************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M023
head
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 O001
Testis
 M024
male body		 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 M053
female body
 SRR902008
ovaries
 GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
.......GGCACGTCAAGCTAGGTAAGCGC............................................................................................................................................................................................................................ 23 0 1 3.00 3 0 2 0 0 0 0 1 0 0 0 0 0 0
......TGGCACGTCAAGCTAGGTAAG............................................................................................................................................................................................................................... 21 0 1 2.00 2 1 0 0 0 0 0 0 0 0 0 1 0 0
............................................ATTTGCCACTCAGCCTTTTCGCGA...................................................................................................................................................................................... 24 2 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0 0
........................................TCAGGTGTGCCACTCAGCCTT............................................................................................................................................................................................. 21 0 1 2.00 2 0 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................ATAAGTGTGGTCTTTTTGGCT.................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................CCCACGTCACTTCATAAGT................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.................GCTAGGTAAGCGCCTTTT....................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
....................AGGTAAGCGCCTTTTGCAGTT................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...TGTTGGCACGTCAAGCTAGGTA................................................................................................................................................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................TCAGGTGTGCCACTCAGCC............................................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................TTTGGCTAGGAAGCTCCCG........ 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...TATTGGCACGTCAAGCTAGGT.................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................AGCGCCTTTTGCAGTTCAGGT............................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.......GGCACGTCAAGCTAGGTAAGC.............................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.......GGCACGTCGAGCTAGGTAAGC.............................................................................................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................CCAGGTGTGCCACTCAGCCTT............................................................................................................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................TGGTTTTTCCCACGTCACTTC......................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................TGGTATGCTTCATCTTTGACTCCTTT.............................................................. 26 0 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0
...TGTTGGCACGTCGAGCTAGGTAA................................................................................................................................................................................................................................ 23 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................ATGCTTCTTCTTTGACTCCTTT.............................................................. 22 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.....TTGGCACGTCAAGCTAGGTAA................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..................................................................GGAAAGTGGCTATGGCTATC.................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................CGCGAAAAGTGGCTATGGCTA...................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................ATGCCACTCAGCCTTTTCGCGA...................................................................................................................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
......AGGCACGTCAAGCTAGGTAAG............................................................................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
................................TTTGCAGTTCAGGTGTGCCAC..................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................AGTGCTTTGGCTTTCCTTTTT............................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.......GGCACGTCAAGCTAGGTAAG............................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................GTGTGCCACTCAGCCTTTTC.......................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................GGATAAGTGGTGAGCTTA............................................................................................................................. 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.................................................................................................GTGTTGTCGCGGATGAGTGGT.................................................................................................................................... 21 3 4 0.75 3 0 0 0 0 0 0 0 0 3 0 0 0 0
....................................................................................................ATGTAGGGGACAAGTGGT.................................................................................................................................... 18 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TTTCATTTGGTATGCTT.............................................................................. 17 1 2 0.50 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................TTGGTATGCTTCAGGTTAGA..................................................................... 20 3 4 0.25 1 0 0 0 0 0 0 0 0 0 0 0 1 0
..............................................................................................................................................................................TCTTTGACTACTTTAGGTT......................................................... 19 2 4 0.25 1 0 0 0 0 0 0 0 0 1 0 0 0 0
...............................................................CGCGTAAAGTGGCGATG.......................................................................................................................................................................... 17 2 6 0.17 1 0 0 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................TAGGGGCTAAGTGGT.................................................................................................................................... 15 1 8 0.13 1 0 0 0 0 0 0 0 0 0 0 0 0 1
.......................................................AGCCTTTTGGCGAAAA................................................................................................................................................................................... 16 1 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 0 1
..................................................................................................................................................................TGGTATGCTTCAGCTGAGA..................................................................... 19 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 1 0
................................................................................................................................................................................TTTGACTGCTTTTGGT.......................................................... 16 1 12 0.08 1 0 0 0 0 0 0 0 0 0 0 0 0 1
.................................................................................................GCGTTGTGGGGGATAGGTGG..................................................................................................................................... 20 3 16 0.06 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................GCTGTATGTTTGACTCCTT............................................................... 19 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:10529384-10529633 + dsi_6264 CGGATAACCGTGCAGTTCGATCCATTCGCGGAAAACGTCAAGTCCACACGGTGAGTC--------------------------------------------------------------------------------------------------GGAAAAGCGCTTTTC-----------------ACCGATACCGATAGCGGGGCATGCGCACAA-CAT--------CCCCTATTCACCACTCGAATTGGATA-GAATTTTCACGAAACC------GAA--------------------AGGAA--------------AAAGAAAACCATAC-------------GA---------AGT------------AGAAACTGA---GG---AAAACCAAAAAGGGTGCAGTGAAGTATTCAC-------------------------------------------------ACCAGAAAAACCGATC----CTTC------------------GAGGGCTAAAAAGG----
droSec2 scaffold_239:12243-12492 + CGGATAACCGTGCAGTTCGATCCATTCGCGGAAAACGTCAAGTCCACACGGTGAGTC--------------------------------------------------------------------------------------------------GGAAAAGCGCTTTTC-----------------ACCGATACCGATAGCGGGGCATGCGCACAA-CAC--------CCCATATTCACCACTCGAATTGGATA-GAATTTTCACGAAACC------GAA--------------------AGGAA--------------AAAGAAAATCATAC-------------GA---------AGA------------AGAAACTGA---GG---AAAACCAAAAAGGGTGCAGTGAAGTATTCAC-------------------------------------------------ATCAGAAAAACCGATC----CTTC------------------GAGGGCTAAAAAGG----
dm3 chr2R:9841901-9842150 + CGGATAACCGTGCAGTTCGATCCATTCGCGGAAAATGTCAAGTCCACACGGTGAGTC--------------------------------------------------------------------------------------------------GGAAAAGCGCTTTTC-----------------ACCGATATCGATAGCGGGACATGCGCACTA-CAC--------CCCCTATTCACCACTCAAATTGGATA-GAATTTTCACGAAACC------GAA--------------------AGGAA--------------AAAGAAAATCATAC-------------TA---------AGA------------AGAAACTGA---GA---AAAACCAAAAAGGGTGCAGTGAAGTATTCAC-------------------------------------------------ACCAGAAAAACCGATC----CTTC------------------GAGGGCTAAAAAGG----
droEre2 scaffold_4845:15979986-15980233 - CGGATAACCGTGCAGTTCGATCCATTCGCGGAAAACGTCAAGTCCACACGGTGAGTC--------------------------------------------------------------------------------------------------GGAAAAGCGCTTTCC-----------------ACCGATACCGATAGCGGGACATGCGCAGTA-CCG--------CCC-CACTCCCCAC-TCAGTTGGATA-GAATTTTCACGAAATC------GAA--------------------AGGAA-A------------AAAGAAAATCATAG-------------CA---------A-------------GAGGAACTCA---GG---AAAACCAAAAAGGGTGCAGCGAAGTATTCAC-------------------------------------------------ACCATAAAAACCGATC----CTTT------------------GAGGGCTTAAAAGG----
droYak3 2R:7111905-7112151 - CGGATAACCGTGCAGTTCGATCCATTCGCGGAAAACGTCAAGTCCACACGGTGAGTC--------------------------------------------------------------------------------------------------GGAAAAGCGCTTTCC-----------------ACCGATACCGATAGCGGGACATGCGCAGTA-CAC--------CCC-CATTCCCCAC-TCCATTGGATA-GAATTTTCACGAAACC------GAA--------------------AGGAA-A------------AAAGAAAATCATAG-------------CA---------A-------------GAGGAACTCA---GG---AAAACCAAA-AGGGTGCAGCGAAGTATTCAC-------------------------------------------------ACCATAAAAACCGATC----CTTC------------------GGGGGCTAAAAAGG----
droEug1 scf7180000409462:3004008-3004250 - CGGATAACCGTGCAGTTCGATCCATTTGCGGAAAACGTCAAGTCCACACGGTAAGTC--------------------------------------------------------------------------------------------------GGAAAAGCGCTTTCC-C---------------ATC--TATCGATAGCGGGACATGCGCAGATGC-----------CCAC---CCCCAC-AGAATTGG--A-AAATTTTCACGGAACC------AAAGTG-----------------ACGAAAAA--------TCAAAAGAAA-----------GAGA---------------------------------AAACCCAAAAGG----AAACCAAA-GAGGTGCAGTGAAGTATTCAC-------------------------------------------------ACCATA-AAACCGATCCATCCTTT------------------GATTGC----GAGA-TGT
droBia1 scf7180000302291:286061-286310 - CGGGTAACCGTGCAGTTTGATCCGTTTGCGGAAAACGTCAAGTCCACTCGGTGAGTT-------------------------------------------------------------------------------------------------GGGAAAACCGCTTTCC-----------------ACC--TATCGATAGCGGGACATGCGCAGTT-GC---------CC--------CCAA-T-GATTGG--A-AAATTTTGACCGAACG------AAAGTA-----------------AGGAA-AC--------GCAAAAGGAGGTCGTA--------------CG---------A-------------GAAAAACTGA---AG----AAACCAAA-GAGGTGCAGTGAAGTGTTCAC-------------------------------------------------TTT---TTCACCAGAGC---CGCT--CTTGAGGCCGTTT---TC--CCTGGGCAGC---C
droTak1 scf7180000415401:785355-785596 - CGGATAACCGTGCAGTTCGATCCGTTTGCGGAAAACGTCAAGTCCACACGGTGAGTT-------------------------------------------------------------------------------------------------GGGAAAACCGCTTTTC-C---------------ACC--TATCGATAGCG-GACATGCGCAGTC-TC-----------------CCCCAG-TGAGTTGG--A-AAATTTTCACGGAACC------AAAGTG-----------------AGGAA-AATCAG------AAAAGGAAATCATA--------------CG---------C-------------GAAGAACTCA---GG----AAAGCAAA-AAGGTGCAGTGAAGTATTCAC-------------------------------------------------ACCATA-AAACCGATT-------TAC----C--------ATGGAG-ATTGG--GGA----
droEle1 scf7180000491271:185306-185540 + CGAATCACCGTGCAGTTTGATCCGTTTGCGGAAAACGTCAAGTCCACACGGTAAGTC--------------------------------------------------------------------------------------------------GGAAAAGTGCTTTCC-----------------TCC--TATCGATAGCGAGACCTGCGCATTG-T--------------------CCAC-TTATTGGG--A-AAATTTTCTCGGAACC------AAAGTGCGTAAG----------------------------------CCAAACGG----AAAGAAAAACGCA---------A-------------GAAAAACTCA---GG---AAAA-CAAA-GAGGTGCTGTAAAGTGTCCAC-------------------------------------------------ACT---TAAACCGATC----CTTT------------------GAG-GTTGTTTTCG----
droRho1 scf7180000779260:15862-16098 + CGGATCACCGTGCAGTTCGATCCGTTTGCGGAAAACGTCAAGTCCACACGGTAAGTC--------------------------------------------------------------------------------------------------GGAAAAGCGCTTTCC-----------------ACA--TATCGATAGCGGGACCTGCGCACTG-T--------------------CTAC-TGAATAAG--A-AAATTTTCACGGAACC------AAAGTGCGTAAG----------------------------------CCAAACGA----AAAAAAGAACGCA---------A-------------GAAAAACTCA---A-----AAACCCAA-GAGGTGCAGTGAAGTATTCAC-------------------------------------------------ACG---AAAACCAATA----ATTT-----GAGGTT-----------GTTTTCGAGT----
droFic1 scf7180000454066:1768176-1768415 - CGGATAACTGTGCAGTTTGATCCATTTGCGGAGAACGTCAAATCCACACGGTGAGTC-------------------------------------------------------------------------------------------------CGGAAAAGCGCTTTTC-----------------TTT--TATCGATAGCGGGACATGCGCAGTC-TT-----------------CTGCAC-CGAATGGG--A-AAATTTTCACAGAACC------AAAGTG--------------------AA-AA--------GCAAAAGAAAA-----------ATAGGA--CA---------C-------------GAAAAACTGA---GA----TAACCGAAAAAGGTGCAGTGAAGTATTCAC-------------------------------------------------ACT---AAAACCGGGCC---TTTC------A-----------ATGAGTTGTATGCG---T
droKik1 scf7180000302817:292622-292904 + CGGATAACCGTGCAGTTCGATCCGTTTGCGGAAAATGTCAAGTCGACACGGTGAGTC--------------------------------------------------------------------------------------------------GGAAAAGCGCTTTTC-CTGG------------CCCGATATCGATAGCGGGGCATGCGCACTG-CCC--------ACC-GCCTCCCCCTTAGAATTGG--A-AAATTTTCTCGGAACC-----AAAAGTGCGTAAG----------------------------------AGAAACGGAGGAAAAGG--AAA-GGCGAACAAAA---ACGAAAACAAAAGACAACTGA---GGTGAAAAATCGAA-AAGGTGCATGGATGTGATGT---------------------------------------------ATGACACA---AAGAATGTCC----CTTT------------------TCGGGATGGCAGGA----
droAna3 scaffold_13266:17152263-17152513 + CGCATCACCGTTCAATTCGATCCGTTCGCGGAAAACGTCAAGTCCACTCGGTAAGTT-----------------------------------------------------------------------------------------------ATTGGAAAAGCGCTTTTC-T---------------TTT--TATCGATTCAGGGACATGCGCAGTT-GA----------------------C-GCGATGGG--A-AAATTTTCTCGAAACTGAACCAAAAGTGCGTAAGCGTA-------AG---------------------CAAATTGGAGGAAAGGTAATATGTACGAA--AAA---CTAAAAACA---------------AC----AAACCGAA-AAGGTGCAGTGAAATATTGTC-------------------------------------------------TCA-TGAGAAGCTAT-------TT------------------GAGATT-------T----
droBip1 scf7180000396735:410988-411229 + CGTATCACCGTCCAGTTCGACCCGTTCGCGGAAAACGTCAAGTCCACTCGGTAAGTT-----------------------------------------------------------------------------------------------ATTGGAAAAGCGCTTTTC-----------------TTT--TATCGATTCAGGGACATGCGCAGTT-C----------------------AC-TCGATGGG--A-AAATTTTCTCGAAACTGAACCAAAAGTGCGTAAGCGT------------A--------------AAAGCAAATCGGAGGGAAGGT--AATGTACGAA--AAA---CGAAAAACA---------------AC----AAACCGAA-AAGGTGCAGTGAAGTATTGTC-------------------------------------------------TC-ATGAGGATCTATC--------------------------------------------
dp5 3:8155275-8155520 + CGCATCACAGTCCAATTTGATCCGTTTGCGGAAAATGTCAAGTCTACCCGGTGAGTG-----G-----------------------------------------------GAGG-----------G-AAATC----TG----------------GGGAAAAGCGCTTTTC-----------------ATT--TATCGATTATGAAACATGCGCAGTT-CGTGGTGTGGTCTCATTTTGGTCAG-TAAATGGA--A-AAATTTTCTCGAAACA------AAAGTGCATGAG----------------------------------G--------------------------------------------------AATCAAA---AG---TAAACCAA--AAATTGCAGTGAACTATT-AC-------------------------------------------------ACG---AGAATCGATT---ACTTT------------------A----CTACCAAGGGTGA
droPer2 scaffold_4:2032781-2033022 + CGCATCACACTCCAATTTGATCCGTTTGCGGAAAATGTCAAGTCTACCCGGTGAGTG-----G-----------------------------------------------GAGG-----------G-AAATC----TG----------------GGGAAAAGCGCTTTTC-----------------ATT--TATCGATTATGAAACATGCGCAGTT-CGTGGTGTGGTCTCATTTCGGTCAG-TAAATGGA--A-AAATTTTCTCGAAACA------AAAGTGCATGAG----------------------------------G--------------------------------------------------AAACAAA---AG---TAAACCAA--AAAGTGCAGTGAACTATT-AC-------------------------------------------------ACG---CAAACCGATT---ACTTT------------------A----CTACCAAGG----
droWil2 scf2_1100000004822:1335937-1336280 + AGGATAACAGTACAGTTTGATCCGTTTGCGGAAAATGTTAAATCCACAAGGTAAATCTATTGAATGATATG------------------GTTGTGTTGTGCGGGCGGGGT-----G--GAGGAGGGGAATTACGTA--G------TGGCGTAATTGGAAAAGCGCTTTCC-CAGAT-----------TTCATTATCGATTACAAAGCATGCGCAGTT-CAG--------CTT--TTTGGC----CAAATAAAG-AAGATTTTTCTCGAGACA----TAAAAGTAGGTAAAAATG-----CAATAAA-AT--------ACAAAAGAAT-----------AAAGGAACACA--------------------------AGACCAA---CG---AAAACCAGAAAA---------------T--CATGAAAAACCATTTGGAATAAAGTGCATGATATGTAGGTGACGTT---------------TGATT----TTTA------------------AAAAGTTA----------
droVir3 scaffold_12875:6219035-6219335 - dvi_5458 CGCATTACAGTGCAGTTCGATCCGTTTGCGGAAAATGTAAAGTCCACACGGTTAGTATGTT-A-------------GGATGGAGGAGGGGGTGAGCGGTGCAGCTGAGAT-----G--TGGGTGGA-TATGA----CA-G-----CAATAGGGTTGGAAAAGCGCTTTCC-CAGCGCGCC----A--GTT--TATCGATTATGAAACATGCGCATTG-CGA--------CGCATAT----------G--GTA--A-AGATTTTCACGAAACA------AAAGTGCGTTGTCGA------------A--------------A------AATGT----AAA------------AATAAAA---ATAAAAACA---------------------ATATTGAC-AAAGTGCATCAAGATATT-AC-------------------------------------------------ACG-TACAAATTGATA----CGA--------------------------AAATAAA----
droMoj3 scaffold_6496:23812842-23813145 + CGCATTACAGTGCAGTTCGATCCTTTTGCCGAAAATGTAAAAGCCACACGGTAAGCG-----A-------------GAAGGAAAGAAACAGTGAGTGG-----------------G--TGGGAGGA-AAAGA----TG-GAGGGTTGATAGGGTTGGAAAAGCGCTTTCC-CAGCACCC---ACA--ATT--TATCGATTATGAAACATGCGCATTG-CAT--------CGCATAT----------G-GTAA--A-AGATTTTCACGAAACA------AAAGTGCGTTCTTGACAATTGTAAT-----------------AAAGAAAAATATTT-------------AA------------CTA---AT-----------AA---AG-------TAGAC-AAAGTGCACCAAATTAGG-AC-------------------------------------------------ACA-TGA-AATTGA-A----CGAA------------------ACAAAATATAAATG----
droGri2 scaffold_15112:1108159-1108480 - CGCATTACAGTGCAGTTCGATCCGTTTGCGGAAAACGTAAAATCCACACGGTAAATG-----AAGAAGATGGGGAAGGGTG-----------------------------GAGGGGAATGGGAGGGGCTTTAGGTAT-GTAG----GGTAGGGTTGGAAAAGCGCTTTTCCCAGCGCCCCATACAATATT--TATCGATTATGAAACATGCGCAATG-CGA--------CGCATAT----------GGTAAA-AA-AGATTTTCACGAAACC------AA-GTGCGTTCTCGA---------GAAA-TATGACAAATACAAAAGAAA--------------------TACGAA--AAA---ATGAAAACA---------------AA----TAATTTGT-AAAGTGCAGAAAAGTATTACA-------------------------------------------------ACCAAA----TTGGCA----ATT-----------------------GATAAAAAGG----

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CGGATAACCGTGCAGTTCGATCCATTCGCGGAAAACGTCAAGTCCACACGGTGAGTC--------------------------------------------------------------------------------------------------GGAAAAGCGCTTTTC-----------------ACCGATACCGATAGCGGGGCATGCGCACAA-CAT--------CCCCTATTCACCACTCGAATTGGATA-GAATTTTCACGAAACC------GAA--------------------AGGAA--------------AAAGAAAACCATAC-------------GA---------AGT------------AGAAACTGA---GG---AAAACCAAAAAGGGTGCAGTGAAGTATTCAC-------------------------------------------------ACCAGAAAAACCGATC----CTTC------------------GAGGGCTAAAAAGG----SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............GTTCGATCCATTCGCGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
...........................................................................................................................................................................................ACCGATACCGATAGCGGGGCA..................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
..................................................................................................................................................................................................................CGCACAA-CAT--------CCCCTATT.....................................................................................................................................................................................................................................................................................................1811.00100001000000000000
.................CGATCCATTCGCGGAAAACGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100001000000000000
............................................................................................................................................................................................................................................................................................................................................................................................GA---GG---AAAACCAAAAAGGGTGC...........................................................................................................................2111.00100000000001000000
...........................GCGGAAAACGTCAAGTCCACACGGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
............................................................................................................................................................GAAAAGCGCTTTTC-----------------ACCGATA................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
....................TCCATTCGCGGAAAACGTCAAGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
..............GTTCGATCCATTCGCGGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
......................................................................................................................................................................................................................................................................................................................................AACCATAC-------------GA---------AGT------------AGAAACT......................................................................................................................................................2011.00100100000000000000
.........GTGCAGTTCGATCCATTCGCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
.......................................................................................................................................................................................................................................................................................................................................................................GT------------AGAAACTGA---GG---AAAACCAA....................................................................................................................................2111.00100010000000000000
...................................................................................................................................................................................................................................................................................................................................GAAAACCATAC-------------GA---------AGT------------AGAAACTGA---GG---............................................................................................................................................2711.00101000000000000000
............CAGTTCGATCCATTCGCGGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
...............................................ACGGTGAGTC--------------------------------------------------------------------------------------------------GGAAAAGCGCT............................................................................................................................................................................................................................................................................................................................................................................2111.00100000001000000000
...................................................TGAGTC--------------------------------------------------------------------------------------------------GGAAAAGCGCTTTTC-----------------.......................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
droSec2
CGGATAACCGTGCAGTTCGATCCATTCGCGGAAAACGTCAAGTCCACACGGTGAGTC--------------------------------------------------------------------------------------------------GGAAAAGCGCTTTTC-----------------ACCGATACCGATAGCGGGGCATGCGCACAA-CAC--------CCCATATTCACCACTCGAATTGGATA-GAATTTTCACGAAACC------GAA--------------------AGGAA--------------AAAGAAAATCATAC-------------GA---------AGA------------AGAAACTGA---GG---AAAACCAAAAAGGGTGCAGTGAAGTATTCAC-------------------------------------------------ATCAGAAAAACCGATC----CTTC------------------GAGGGCTAAAAAGG----SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................CAAGTCCACACGGTGAGTC--------------------------------------------------------------------------------------------------GG.....................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
....TAACCGTGCAGTTCGATCCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
................................AAACGTCAAGTCCACACGGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAACCGATC----CTTC------------------GAGGGC............2111.0010100
....................................GTCAAGTCCACACGGTGAGTC--------------------------------------------------------------------------------------------------.......................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
.............................................................................................................................................................AAAAGCGCTTTTC-----------------ACCGATAC...............................................................................................................................................................................................................................................................................................................................................2111.0010100
................................................CGGTGAGTC--------------------------------------------------------------------------------------------------GGAAAAGCGCTT...........................................................................................................................................................................................................................................................................................................................................................................2111.0010100
..........TGCAGTTCGATCCATTCGCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
...............................AAAACGTCAAGTCCACACGGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
...........GCAGTTCGATCCATTCGCGGAAAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
.....................................TCAAGTCCACACGGTGAGTC--------------------------------------------------------------------------------------------------G......................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
............................................................................................................................................................................................................................................................................................................................................................................................GA---GG---AAAACCAAAAAGGGTG............................................................................................................................2011.0010001
...............................................................................................................................................................AAGCGCTTTTC-----------------ACCGATACCG.............................................................................................................................................................................................................................................................................................................................................2111.0010100
.......................ATTCGCGGAAAACGTCAAGTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
...............................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAC-------------------------------------------------ATCAGAAAAACCGA..............................................2011.0010100
...........................................................................................................................................................................................................................................................................................................................................TAC-------------GA---------AGA------------AGAAACTGA---GG---............................................................................................................................................1911.0011000
........................................................C--------------------------------------------------------------------------------------------------GGAAAAGCGCTTTTC-----------------ACC....................................................................................................................................................................................................................................................................................................................................................1911.0011000
.........................................................................................................................................................................................................................................................................................................................................................................................................ACCAAAAAGGGTGCAGTGAA.....................................................................................................................2011.0010001
...........................................................................................................................................................................................ACCGATACCGATAGCGGGGCA..................................................................................................................................................................................................................................................................................................................................2111.0011000
........................................AGTCCACACGGTGAGTC--------------------------------------------------------------------------------------------------GGA....................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
dm3
CGGATAACCGTGCAGTTCGATCCATTCGCGGAAAATGTCAAGTCCACACGGTGAGTC--------------------------------------------------------------------------------------------------GGAAAAGCGCTTTTC-----------------ACCGATATCGATAGCGGGACATGCGCACTA-CAC--------CCCCTATTCACCACTCAAATTGGATA-GAATTTTCACGAAACC------GAA--------------------AGGAA--------------AAAGAAAATCATAC-------------TA---------AGA------------AGAAACTGA---GA---AAAACCAAAAAGGGTGCAGTGAAGTATTCAC-------------------------------------------------ACCAGAAAAACCGATC----CTTC------------------GAGGGCTAAAAAGG----SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............AGTTCGATCCATTCGCGGAAAATGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2618.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................ACCAAAAAGGGTGCAGTGAAGTATT................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................TATCGATAGCGGGACATGCGC.............................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...............TTCGATCCATTCGCGGAAAATGTCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGAGTC--------------------------------------------------------------------------------------------------GGAAAAGCGCTTTT.........................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................ATATCGATAGCGGGACATGCG..............................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................AGGGTGCAGTGAAGTATTCAC-------------------------------------------------C...........................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GTGCAGTTCGATCCATTCGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000020000000000000000000000000000
................TCGATCCATTCGCGGAAAATGTCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................AAGTCCACACGGTGAGTC--------------------------------------------------------------------------------------------------GGA....................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
.......................ATTCGCGGAAAATGTCAAGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
.............AGTTCGATCCATTCGCGGAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000
...............................................................................................................................................................AAGCGCTTTTC-----------------ACCGATATCG.............................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........TGCAGTTCGATCCATTCGCGGAAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GCAGTTCGATCCATTCGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CAAGTCCACACGGTGAGTC--------------------------------------------------------------------------------------------------GG.....................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..........TGCAGTTCGATCCATTCGCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000
............CAGTTCGATCCATTCGCGGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GTTCGATCCATTCGCGGAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
..................GATCCATTCGCGGAAAATGTCAAGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001000000000000
..............................................................................................................................................................................................GATATCGATAGCGGGACATGC...............................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000010000
............................................CACACGGTGAGTC--------------------------------------------------------------------------------------------------GGAAAAGC...............................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
..................GATCCATTCGCGGAAAATGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GATAACCGTGCAGTTCGATCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................CTTTTC-----------------ACCGATATCGATAGCG.......................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGTATTCAC-------------------------------------------------ACCAGAAGG...................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................ATAGCGGGACATGCGCACTA-C.......................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......ACCGTGCAGTTCGATCCATTCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
........................................................................................................................................................................................................................................................................ACGAAACC------GAA--------------------AGGAA--------------AAAGA.............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................GGTGAGTC--------------------------------------------------------------------------------------------------GGAAAAGCGCTTT..........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................TTCGCGGAAAATGTCAAGTCCACACGGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................GGGACATGCGCACTA-CAC--------CC...........................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TTCGCGGAAAATGTCAAGTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCGATC----CTTC------------------GAGGGCTAA.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................................CACGGTGAGTC--------------------------------------------------------------------------------------------------GGAAAAGCG..............................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................GCGCTTTTC-----------------ACCGATATCGAT...........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................TGTCAAGTCCACACGGTGAGTC--------------------------------------------------------------------------------------------------.......................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
................TCGATCCATTCGCGGAAAATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CATTCGCGGAAAATGTCAAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............GTTCGATCCATTCGCGGAAAATGTCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CGTGCAGTTCGATCCATTCGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TGA---GA---AAAACCAAAAAGGGTG............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................AAAGGGTGCAGTGAAGTAT.................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................AATTTTCACGAAACC------GAA--------------------AGC..................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................AAAACCAAAAAGGGTGCAGT........................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................CACGGTGAGTC--------------------------------------------------------------------------------------------------GGAAAAGC...............................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CAAAAAGGGTGCAGTGAAG....................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................................CCACACGGTGAGTC--------------------------------------------------------------------------------------------------GGAAAAGC...............................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TAGCGGGACATGCGCACTA-CAC--------CCC..........................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................CCGATATCGATAGCGGGACATGC...............................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TCCATTCGCGGAAAATGTCAAGTCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACCGATC----CTTC------------------GAGGGCT...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................AAAATCATAC-------------TA---------AGA------------AGAAAC.......................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
................................................................................................................................................................................................................................................................................................................................................................................................................AGGGTGCAGTGAAGTATTCA..............................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................CAC-------------------------------------------------ACCAGAAAAACCGATC----CT......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.............................................ACACGGTGAGTC--------------------------------------------------------------------------------------------------GGAAAAGCG..............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCGATC----CTTC------------------GAGGGCTA..........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..........................CGCGGAAAATGTCAAGTCCACACGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................CGGTGAGTC--------------------------------------------------------------------------------------------------GGAAAAGCGCTTT..........................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................ATA-GAATTTTCACGAAACC------GA..........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ATTCGCGGAAAATGTCAAGTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GCAGTTCGATCCATTCGCGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................ACCGATATCGATAGCGGGACATGCGC.............................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...................................................................................................................................................................................................................................................TCAAATTGGATA-GAATTTTC..........................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................TTTC-----------------ACCGATATCGATAGCGGT.....................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................TCGATAGCGGGACATGCGCAC...........................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................ACTCAAATTGGATA-GAATTTTC..........................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.........GTGCAGTTCGATCCATTCGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................GATCCATTCGCGGAAAATGTCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................ATCGATAGCGGGACATGCTT.............................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................TTC-----------------ACCGATATCGATAGCGGG.....................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..............................................CACGGTGAGTC--------------------------------------------------------------------------------------------------GGAAAAGCGC.............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................TCACGAAACC------GAA--------------------AGGAA--------------A.................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ATTCGCGGAAAATGTCAAGTCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................ATGTCAAGTCCACACGGTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...............................................................................................................................................................................................ATATCGATAGCGGGACATGCC..............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACCGATC----CTTC------------------GAGGG.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................CTCAAATTGGATA-GAATTTTCA.........................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TTGGATA-GAATTTTCACGAAA....................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............AGTTCGATCCATTCGCGGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................CACGAAACC------GAA--------------------AGGAA--------------AAAG..............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................ACCAAAAAGGGTGCAGTG.......................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................AGCGCTTTTC-----------------ACCGATATCG.............................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................TTTTC-----------------ACCGATATCGATAGC........................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................AAAGGGTGCAGTGAAGTATTC...............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CCAAAAAGGGTGCAGTGAAG....................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................ATGCGCACTA-CAC--------CCCCTATT.....................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAACCGATC----CTTC------------------GAGGGCT...........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................TTTTC-----------------ACCGATATCGATAGCG.......................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......ACCGTGCAGTTCGATCCATTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................CACGGTGAGTC--------------------------------------------------------------------------------------------------GGAAAAGCGCTTTT.........................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GTGCAGTTCGATCCATTCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
....TAACCGTGCAGTTCGATCCAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACCGATC----CTTC------------------GAGGGCT...........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................AAAGCGCTTTTC-----------------ACCGATATC..............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAACCGATC----CTTC------------------GAGGGC............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CAGTTCGATCCATTCGCGGAAAATGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................C------GAA--------------------AGGAA--------------AAAGAAAATGC.......................................................................................................................................................................................................2070.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
droEre2
CGGATAACCGTGCAGTTCGATCCATTCGCGGAAAACGTCAAGTCCACACGGTGAGTC--------------------------------------------------------------------------------------------------GGAAAAGCGCTTTCC-----------------ACCGATACCGATAGCGGGACATGCGCAGTA-CCG--------CCC-CACTCCCCAC-TCAGTTGGATA-GAATTTTCACGAAATC------GAA--------------------AGGAA-A------------AAAGAAAATCATAG-------------CA---------A-------------GAGGAACTCA---GG---AAAACCAAAAAGGGTGCAGCGAAGTATTCAC-------------------------------------------------ACCATAAAAACCGATC----CTTT------------------GAGGGCTTAAAAGG----SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................ATCCATTCGCGGAAAACGTCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
.....................................................................................................................................................................................................................................................................................................................................AAATCATAG-------------CA---------A-------------GAGGAACT......................................................................................................................................................2011.0011000000
......................................CAAGTCCACACGGTGAGTC--------------------------------------------------------------------------------------------------GG.....................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
............................................................................................................................................................................................................................................................................................................................................................................................................AAAAAGGGTGCAGCGAAGT...................................................................................................................1911.0010001000
..GATAACCGTGCAGTTCGATCCAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
.........................TCGCGGAAAACGTCAAGTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
........................TTCGCGGAAAACGTCAAGTCCACACGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................ACCAAAAAGGGTGCAGCGAAGTA..................................................................................................................2311.0010000010
...........................................................................................................................................................................................................................................................................................................................................................................................................CAAAAAGGGTGCAGCGAAGT...................................................................................................................2011.0010000010
droYak3
CGGATAACCGTGCAGTTCGATCCATTCGCGGAAAACGTCAAGTCCACACGGTGAGTC--------------------------------------------------------------------------------------------------GGAAAAGCGCTTTCC-----------------ACCGATACCGATAGCGGGACATGCGCAGTA-CAC--------CCC-CATTCCCCAC-TCCATTGGATA-GAATTTTCACGAAACC------GAA--------------------AGGAA-A------------AAAGAAAATCATAG-------------CA---------A-------------GAGGAACTCA---GG---AAAACCAAA-AGGGTGCAGCGAAGTATTCAC-------------------------------------------------ACCATAAAAACCGATC----CTTC------------------GGGGGCTAAAAAGG----SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................................................................................................................................G-------------CA---------A-------------GAGGAACTCA---GG---AAAACC......................................................................................................................................2211.00100100000000
.................................................................................................................................................................................................................................................................................................................................AAGAAAATCATAG-------------CA---------A-------------GAGG..........................................................................................................................................................2011.00100000010000
droEug1
CGGATAACCGTGCAGTTCGATCCATTTGCGGAAAACGTCAAGTCCACACGGTAAGTC--------------------------------------------------------------------------------------------------GGAAAAGCGCTTTCC-C---------------ATC--TATCGATAGCGGGACATGCGCAGATGC-----------CCAC---CCCCAC-AGAATTGG--A-AAATTTTCACGGAACC------AAAGTG-----------------ACGAAAAA--------TCAAAAGAAA-----------GAGA---------------------------------AAACCCAAAAGG----AAACCAAA-GAGGTGCAGTGAAGTATTCAC-------------------------------------------------ACCATA-AAACCGATCCATCCTTT------------------GATTGC----GAGA-TGTSizeHit CountTotal NormTotal
No Reads
droBia1
CGGGTAACCGTGCAGTTTGATCCGTTTGCGGAAAACGTCAAGTCCACTCGGTGAGTT-------------------------------------------------------------------------------------------------GGGAAAACCGCTTTCC-----------------ACC--TATCGATAGCGGGACATGCGCAGTT-GC---------CC--------CCAA-T-GATTGG--A-AAATTTTGACCGAACG------AAAGTA-----------------AGGAA-AC--------GCAAAAGGAGGTCGTA--------------CG---------A-------------GAAAAACTGA---AG----AAACCAAA-GAGGTGCAGTGAAGTGTTCAC-------------------------------------------------TTT---TTCACCAGAGC---CGCT--CTTGAGGCCGTTT---TC--CCTGGGCAGC---CSizeHit CountTotal NormTotal
No Reads
droTak1
CGGATAACCGTGCAGTTCGATCCGTTTGCGGAAAACGTCAAGTCCACACGGTGAGTT-------------------------------------------------------------------------------------------------GGGAAAACCGCTTTTC-C---------------ACC--TATCGATAGCG-GACATGCGCAGTC-TC-----------------CCCCAG-TGAGTTGG--A-AAATTTTCACGGAACC------AAAGTG-----------------AGGAA-AATCAG------AAAAGGAAATCATA--------------CG---------C-------------GAAGAACTCA---GG----AAAGCAAA-AAGGTGCAGTGAAGTATTCAC-------------------------------------------------ACCATA-AAACCGATT-------TAC----C--------ATGGAG-ATTGG--GGA----SizeHit CountTotal NormTotal
No Reads
droEle1
CGAATCACCGTGCAGTTTGATCCGTTTGCGGAAAACGTCAAGTCCACACGGTAAGTC--------------------------------------------------------------------------------------------------GGAAAAGTGCTTTCC-----------------TCC--TATCGATAGCGAGACCTGCGCATTG-T--------------------CCAC-TTATTGGG--A-AAATTTTCTCGGAACC------AAAGTGCGTAAG----------------------------------CCAAACGG----AAAGAAAAACGCA---------A-------------GAAAAACTCA---GG---AAAA-CAAA-GAGGTGCTGTAAAGTGTCCAC-------------------------------------------------ACT---TAAACCGATC----CTTT------------------GAG-GTTGTTTTCG----SizeHit CountTotal NormTotal
No Reads
droRho1
CGGATCACCGTGCAGTTCGATCCGTTTGCGGAAAACGTCAAGTCCACACGGTAAGTC--------------------------------------------------------------------------------------------------GGAAAAGCGCTTTCC-----------------ACA--TATCGATAGCGGGACCTGCGCACTG-T--------------------CTAC-TGAATAAG--A-AAATTTTCACGGAACC------AAAGTGCGTAAG----------------------------------CCAAACGA----AAAAAAGAACGCA---------A-------------GAAAAACTCA---A-----AAACCCAA-GAGGTGCAGTGAAGTATTCAC-------------------------------------------------ACG---AAAACCAATA----ATTT-----GAGGTT-----------GTTTTCGAGT----SizeHit CountTotal NormTotal
No Reads
droFic1
CGGATAACTGTGCAGTTTGATCCATTTGCGGAGAACGTCAAATCCACACGGTGAGTC-------------------------------------------------------------------------------------------------CGGAAAAGCGCTTTTC-----------------TTT--TATCGATAGCGGGACATGCGCAGTC-TT-----------------CTGCAC-CGAATGGG--A-AAATTTTCACAGAACC------AAAGTG--------------------AA-AA--------GCAAAAGAAAA-----------ATAGGA--CA---------C-------------GAAAAACTGA---GA----TAACCGAAAAAGGTGCAGTGAAGTATTCAC-------------------------------------------------ACT---AAAACCGGGCC---TTTC------A-----------ATGAGTTGTATGCG---TSizeHit CountTotal NormTotal
No Reads
droKik1
CGGATAACCGTGCAGTTCGATCCGTTTGCGGAAAATGTCAAGTCGACACGGTGAGTC--------------------------------------------------------------------------------------------------GGAAAAGCGCTTTTC-CTGG------------CCCGATATCGATAGCGGGGCATGCGCACTG-CCC--------ACC-GCCTCCCCCTTAGAATTGG--A-AAATTTTCTCGGAACC-----AAAAGTGCGTAAG----------------------------------AGAAACGGAGGAAAAGG--AAA-GGCGAACAAAA---ACGAAAACAAAAGACAACTGA---GGTGAAAAATCGAA-AAGGTGCATGGATGTGATGT---------------------------------------------ATGACACA---AAGAATGTCC----CTTT------------------TCGGGATGGCAGGA----SizeHit CountTotal NormTotal
No Reads
droAna3
CGCATCACCGTTCAATTCGATCCGTTCGCGGAAAACGTCAAGTCCACTCGGTAAGTT-----------------------------------------------------------------------------------------------ATTGGAAAAGCGCTTTTC-T---------------TTT--TATCGATTCAGGGACATGCGCAGTT-GA----------------------C-GCGATGGG--A-AAATTTTCTCGAAACTGAACCAAAAGTGCGTAAGCGTA-------AG---------------------CAAATTGGAGGAAAGGTAATATGTACGAA--AAA---CTAAAAACA---------------AC----AAACCGAA-AAGGTGCAGTGAAATATTGTC-------------------------------------------------TCA-TGAGAAGCTAT-------TT------------------GAGATT-------T----SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............AATTCGATCCGTTCGCGGAAAACGTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.....CACCGTTCAATTCGATCCGTTCGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000010
....TCACCGTTCAATTCGATCCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.........GTTCAATTCGATCCGTTCGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
droBip1
CGTATCACCGTCCAGTTCGACCCGTTCGCGGAAAACGTCAAGTCCACTCGGTAAGTT-----------------------------------------------------------------------------------------------ATTGGAAAAGCGCTTTTC-----------------TTT--TATCGATTCAGGGACATGCGCAGTT-C----------------------AC-TCGATGGG--A-AAATTTTCTCGAAACTGAACCAAAAGTGCGTAAGCGT------------A--------------AAAGCAAATCGGAGGGAAGGT--AATGTACGAA--AAA---CGAAAAACA---------------AC----AAACCGAA-AAGGTGCAGTGAAGTATTGTC-------------------------------------------------TC-ATGAGGATCTATC--------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
CGCATCACAGTCCAATTTGATCCGTTTGCGGAAAATGTCAAGTCTACCCGGTGAGTG-----G-----------------------------------------------GAGG-----------G-AAATC----TG----------------GGGAAAAGCGCTTTTC-----------------ATT--TATCGATTATGAAACATGCGCAGTT-CGTGGTGTGGTCTCATTTTGGTCAG-TAAATGGA--A-AAATTTTCTCGAAACA------AAAGTGCATGAG----------------------------------G--------------------------------------------------AATCAAA---AG---TAAACCAA--AAATTGCAGTGAACTATT-AC-------------------------------------------------ACG---AGAATCGATT---ACTTT------------------A----CTACCAAGGGTGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................GCAGTT-CGTGGTGTGGTC............................................................................................................................................................................................................................................................................................................1812.0020200000000
.....................................................................................................................................................................................................................................................................TTCTCGAAACA------AAAGTGC.....................................................................................................................................................................................................................................................1811.0010100000000
...................................................................................................................................................................................................................GCAGTT-CGTGGTGTGGTCTC..........................................................................................................................................................................................................................................................................................................2011.0010100000000
........................................AGTCTACCCGGTGAGTG-----G-----------------------------------------------....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
....................................................................................................................................................................................................................CAGTT-CGTGGTGTGGTCTCA.........................................................................................................................................................................................................................................................................................................2011.0010100000000
........................TTTGCGGAAAATGTCAAGTCTACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..........TCCAATTTGATCCGTTTGCGGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
....TCACAGTCCAATTTGATCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.....CACAGTCCAATTTGATCCGTTTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100000
..................................................................................................................................................................................................................................................................ATTTTCTCGAAACA------AAAGTGC.....................................................................................................................................................................................................................................................2111.0010100000000
..........................................................................................................................................................................................................................................................................GAAACA------AAAGTGCATGAG----------------------------------G--------------------------------------------------A..........................................................................................................................................................2011.0010100000000
....TCACAGTCCAATTTGATCCGTTTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..............................GAAAATGTCAAGTCTACCCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
................................................CGGTGAGTG-----G-----------------------------------------------GAGG-----------G-AAAAA----..........................................................................................................................................................................................................................................................................................................................................................................................................2050.2010100000000
droPer2
CGCATCACACTCCAATTTGATCCGTTTGCGGAAAATGTCAAGTCTACCCGGTGAGTG-----G-----------------------------------------------GAGG-----------G-AAATC----TG----------------GGGAAAAGCGCTTTTC-----------------ATT--TATCGATTATGAAACATGCGCAGTT-CGTGGTGTGGTCTCATTTCGGTCAG-TAAATGGA--A-AAATTTTCTCGAAACA------AAAGTGCATGAG----------------------------------G--------------------------------------------------AAACAAA---AG---TAAACCAA--AAAGTGCAGTGAACTATT-AC-------------------------------------------------ACG---CAAACCGATT---ACTTT------------------A----CTACCAAGG----SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....CACACTCCAATTTGATCCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.003201000
.........................TTGCGGAAAATGTCAAGTCTACCCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.003300000
...........................................CTACCCGGTGAGTG-----G-----------------------------------------------GAGG-----------C-...................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
..........................TGCGGAAAATGTCAAGTCTACCCGCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.....CACACTCCAATTTGATCCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
................................AAATGTCAAGTCTACCCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
.....CACACTCCAATTTGATCCGTTTGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
......ACACTCCAATTTGATCCGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
...ATCACACTCCAATTTGATCCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
droWil2
AGGATAACAGTACAGTTTGATCCGTTTGCGGAAAATGTTAAATCCACAAGGTAAATCTATTGAATGATATG------------------GTTGTGTTGTGCGGGCGGGGT-----G--GAGGAGGGGAATTACGTA--G------TGGCGTAATTGGAAAAGCGCTTTCC-CAGAT-----------TTCATTATCGATTACAAAGCATGCGCAGTT-CAG--------CTT--TTTGGC----CAAATAAAG-AAGATTTTTCTCGAGACA----TAAAAGTAGGTAAAAATG-----CAATAAA-AT--------ACAAAAGAAT-----------AAAGGAACACA--------------------------AGACCAA---CG---AAAACCAGAAAA---------------T--CATGAAAAACCATTTGGAATAAAGTGCATGATATGTAGGTGACGTT---------------TGATT----TTTA------------------AAAAGTTA----------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................GCGGGCGGGGT-----G--GAGGAGGGG...................................................................................................................................................................................................................................................................................................................................................................................................................2113.00301200
...................................................................................................GCGGGCGGGGT-----G--GAGGAGGG....................................................................................................................................................................................................................................................................................................................................................................................................................2012.00201100
.....AACAGTACAGTTTGATCCGTTTGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
......................................................................................................................................................................................................................................................................TCTCGAGACA----TAAAAGTAGA....................................................................................................................................................................................................................................................2011.00110000
...ATAACAGTACAGTTTGATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.................................................................................................................................................................................................................................................................................................................................AAGAAT-----------AAAGGAACACA--------------------------A..........................................................................................................................................................1811.00100010
.......................................................................................................................................................................................................................TT-CAG--------CTT--TTTGGC----CAAATAA.......................................................................................................................................................................................................................................................................................2111.00101000
.....................................................................................................................................................................................................................................................................................AAAAGTAGGTAAAAATG-----C......................................................................................................................................................................................................................................1811.00100010
................................................................................................TGTGCGGGCGGGGT-----G--GAGGAGGGGAA.................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
..........TACAGTTTGATCCGTTTGCGGAAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
droVir3
CGCATTACAGTGCAGTTCGATCCGTTTGCGGAAAATGTAAAGTCCACACGGTTAGTATGTT-A-------------GGATGGAGGAGGGGGTGAGCGGTGCAGCTGAGAT-----G--TGGGTGGA-TATGA----CA-G-----CAATAGGGTTGGAAAAGCGCTTTCC-CAGCGCGCC----A--GTT--TATCGATTATGAAACATGCGCATTG-CGA--------CGCATAT----------G--GTA--A-AGATTTTCACGAAACA------AAAGTGCGTTGTCGA------------A--------------A------AATGT----AAA------------AATAAAA---ATAAAAACA---------------------ATATTGAC-AAAGTGCATCAAGATATT-AC-------------------------------------------------ACG-TACAAATTGATA----CGA--------------------------AAATAAA----SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............AGTTCGATCCGTTTGCGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000000000020000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................TATCGATTATGAAACATGCGC.............................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
.......CAGTGCAGTTCGATCCGTTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000001
...........................................................................................................................................................................................................................GA--------CGCATAT----------G--GTA--A-AGATTTTCAC........................................................................................................................................................................................................................................................................2411.001000000000000000000100000000000000000000000000000000000000000000
..................................................................................................TGCAGCTGAGAT-----G--TGGGTGGA-...................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000001000000000000000000000000000000000000000
.............AGTTCGATCCGTTTGCGGAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
...ATTACAGTGCAGTTCGATCCGTTTGCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
..........................TGCGGAAAATGTAAAGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000001000
..............GTTCGATCCGTTTGCGGAAAATGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
................................AAATGTAAAGTCCACACGCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.251000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................GTA--A-AGATTTTCACGAACT...................................................................................................................................................................................................................................................................1950.201000000000000000000000000000000000001000000000000000000000000000
droMoj3
CGCATTACAGTGCAGTTCGATCCTTTTGCCGAAAATGTAAAAGCCACACGGTAAGCG-----A-------------GAAGGAAAGAAACAGTGAGTGG-----------------G--TGGGAGGA-AAAGA----TG-GAGGGTTGATAGGGTTGGAAAAGCGCTTTCC-CAGCACCC---ACA--ATT--TATCGATTATGAAACATGCGCATTG-CAT--------CGCATAT----------G-GTAA--A-AGATTTTCACGAAACA------AAAGTGCGTTCTTGACAATTGTAAT-----------------AAAGAAAAATATTT-------------AA------------CTA---AT-----------AA---AG-------TAGAC-AAAGTGCACCAAATTAGG-AC-------------------------------------------------ACA-TGA-AATTGA-A----CGAA------------------ACAAAATATAAATG----SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................TTGCCGAAAATGTAAAAGCCACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...............................................................................GGAAAGAAACAGTGAGTGG-----------------G--............................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...........................................................................................................................................................................................................................................................................................................................................................................A---AT-----------AA---AG-------TAGAC-AAAGTG............................................................................................................................1811.001100000
.......................................................................................ACAGTGAGTGG-----------------G--TGGGAG......................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
...............................AAAATGTAAAAGCCACACG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droGri2
CGCATTACAGTGCAGTTCGATCCGTTTGCGGAAAACGTAAAATCCACACGGTAAATG-----AAGAAGATGGGGAAGGGTG-----------------------------GAGGGGAATGGGAGGGGCTTTAGGTAT-GTAG----GGTAGGGTTGGAAAAGCGCTTTTCCCAGCGCCCCATACAATATT--TATCGATTATGAAACATGCGCAATG-CGA--------CGCATAT----------GGTAAA-AA-AGATTTTCACGAAACC------AA-GTGCGTTCTCGA---------GAAA-TATGACAAATACAAAAGAAA--------------------TACGAA--AAA---ATGAAAACA---------------AA----TAATTTGT-AAAGTGCAGAAAAGTATTACA-------------------------------------------------ACCAAA----TTGGCA----ATT-----------------------GATAAAAAGG----SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 12:49 PM