ID:

dsi_6218

 Coordinate:

3r:25594276-25594425 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.0 -16.8 -16.6

Flybase annnotation

exon [3r_25594113_25594275_-]; CDS [3r_25594113_25594275_-]; intron [3r_25594276_25594860_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CGGGGGCAGTTTCTTTTACGGCCCCTCGGTTTATCTGCCCATTAGAGAGTAACTACCGGTCTAATGTCCACTCGAAAGAGATTAACCTGTCACTGAAAGAAATACTATGGATGAAACGATAGCTTTCAGTGACTTTCTAGTTCCCCGTTCAAAGCAGCCCAAACAGTACATTTAATCAACCAACATTATATTCCGAATAGGAATCGGTGCGCCTGCTGGCCAACATTGCGGACACGAGCAAGGATGGACT
**************************************************************************.....(((((....(((((((((((.....((((..........)))))))))))))))....)))))..........................********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 M025
embryo
 O002
Head
 M053
female body
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 SRR553485
Chicharo_3 day-old ovaries
........................................................................................................................................................................................................................................CACGAGCAAGGATGGACT 18 0 1 9.00 9 5 0 4 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GGACACGAGCAAGGATGGACT 21 0 1 4.00 4 2 1 1 0 0 0 0 0 0
..........................................................................AAAGAGATTAACCTGTCACTG........................................................................................................................................................... 21 0 1 4.00 4 1 3 0 0 0 0 0 0 0
...........................................................................AAGAGATTAACCTGTCACTG........................................................................................................................................................... 20 0 1 3.00 3 1 2 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................CGGACACGAGCAAGGATGGACT 22 0 1 3.00 3 2 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................CGGACACGAGCAAGGATG.... 18 0 1 2.00 2 0 2 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................CGGACACGAGCAAGGATGGAC. 21 0 1 2.00 2 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TTGCGGACACGAGCAAGGATGGACT 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0
............................................................................AGAGATTAACCTGTCACTG........................................................................................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................TTGCGGACACGAGCAAGGATG.... 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0
.......................................................................TCGAAAGAGATTAACCTGTCACTG........................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.............................................................................GAGATTAACCTGTCACTG........................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................................TAGAGAGTAACTACCGGTCTA........................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................................................................ATTGCGGACACGAGCAAGGATGGACT 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.......................................................................TCGAAAGAGATTGACCTGTCACTG........................................................................................................................................................... 24 1 1 1.00 1 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................TTGCGGACACGAGCAAGGA...... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.................................................................................................................................................CGTTCAAAGCAGCCCAAACAGTA.................................................................................. 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................CAGTACATTTAATCAACCAAC.................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................................................GACACGAGCAAGGATGGACT 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................CGGACACGAGCAAGGATGGA.. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0
......................................................................................................................ATAGCTTTCAGTGACTTTCTAGTTC........................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................TATGCCGACTAGGGATCGGT.......................................... 20 3 1 1.00 1 0 0 0 0 0 0 1 0 0
........................................................................................................................................................................................................................................CACGAGCAAGGATGGACC 18 1 1 1.00 1 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GGACACGAGCAAGGATGGAC. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................CGAATAGGAATCGGTGCGCCT.................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................GTACACGAGCAAGGATGGACT 21 1 1 1.00 1 0 0 1 0 0 0 0 0 0
........................................................................................GTCACTGAAAGAAATACTATG............................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................GCACATTTGATCAACCAACATC............................................................... 22 3 1 1.00 1 0 0 0 0 0 1 0 0 0
............................................................................................................................................................................................TATGCCGACTAGGGATCGG........................................... 19 3 7 0.71 5 3 1 0 0 1 0 0 0 0
.....................CCGGTCGGTTTATCTGCC................................................................................................................................................................................................................... 18 2 7 0.14 1 0 1 0 0 0 0 0 0 0
..........................................TAGAGCGCCACTACCGGT.............................................................................................................................................................................................. 18 3 16 0.13 2 0 0 0 0 0 0 2 0 0
.....................................CCCATTAGAGACTGACT.................................................................................................................................................................................................... 17 2 10 0.10 1 0 0 0 0 0 0 0 0 1
..............................................................................................................................................................................................TGCCGACTAGGGATCGGTG......................................... 19 3 11 0.09 1 0 0 0 0 0 1 0 0 0
.....................................................................................................................................TTACTTGTTCCCCGTTC.................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

GCCCCCGTCAAAGAAAATGCCGGGGAGCCAAATAGACGGGTAATCTCTCATTGATGGCCAGATTACAGGTGAGCTTTCTCTAATTGGACAGTGACTTTCTTTATGATACCTACTTTGCTATCGAAAGTCACTGAAAGATCAAGGGGCAAGTTTCGTCGGGTTTGTCATGTAAATTAGTTGGTTGTAATATAAGGCTTATCCTTAGCCACGCGGACGACCGGTTGTAACGCCTGTGCTCGTTCCTACCTGA
**********************************************************************************.....(((((....(((((((((((.....((((..........)))))))))))))))....)))))..........................************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M024
male body		 SRR902009
testis
 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 M053
female body
 O002
Head
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
........................................................................................................................TCGAAAGTCACTGAAAGATC.............................................................................................................. 20 0 1 2.00 2 1 0 0 0 0 0 0 1 0 0
............................................CTCTCATTGATGGCCAGATTA......................................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..............................................CTCATTGATGGCCAGATTAC........................................................................................................................................................................................ 20 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
....................................................................................GGGACAGTGACTTTCTTTATG................................................................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................CTCTAATTGGACAGTGACTT......................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................GGGTAATCTCTCATTGATGGCC............................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................TCGAAAGTCACTGAAAGATCA............................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TCGGGTTTGTCATGTAAATTA.......................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................AGGGGCAAGTTTCGTCGGGTT........................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................................CGGGTTTGTCATGTAAATTAG......................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................GTCATGTAAATTAGTTGGTTG.................................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................GTTTCGTCGGGTTTGTCATGT................................................................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
...............................................TCATTGATGGCCAGATTACAG...................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................GGGTAATCTCTCATTGATGGC................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................CTCATTGATGGCCAGATTACA....................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
....................CGGGGAGCCAAATAGACGG................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................CTCGGGTTTGTCATATAAGTTA.......................................................................... 22 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...................................................................................................................TGCTATCGAAAGTCACTGAAA.................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................................CACTGAAAGATCAAGGGGCAA..................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
......................................GGTAATCTCTCATTGATGGCC............................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
........................................................................................................................CCGAAAGTCACTGAAAGATC.............................................................................................................. 20 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................TCGGGTTTGTCATATAAGT............................................................................ 19 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............AATGCCGGGGAACCTAATAGG...................................................................................................................................................................................................................... 21 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0
...................CCGGCGAGCCCATTAGACGG................................................................................................................................................................................................................... 20 3 4 0.25 1 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................AGGTTTACTCGGGTTTGTCA................................................................................... 20 3 9 0.11 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................CTCGGGTTTGTCATATAAG............................................................................. 19 3 11 0.09 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................TGTTGAAAGTCACTGTAAGAT............................................................................................................... 21 3 13 0.08 1 0 0 0 0 0 0 0 0 1 0
..........................................................................................................................................................................GAATTAGTTGGTTGT................................................................. 15 1 19 0.05 1 0 0 0 0 0 0 0 0 0 1
..........................................................................................................................GAAATTCGCTGAAAGAACAA............................................................................................................ 20 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:25594226-25594475 - dsi_6218 CGGGGGCAGTTTCTTTTACGGC-CCCTCGGTTTATCTGCCC-ATTAGAGAGTAACTACCG----------GTCTAATGTCCACTCGAAAGAGATTAACCTGTCACTGAAAGAAATACTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGAT---G-----AAA----------------CGATAGCTTTCAGTGACTTTCTAGTTCCCCGT------------------------TCAAAGCAGCCCAAACAGTACATTTA------------------------------------------------------------------ATCAACCAACATT----------------------------------------------------------------------------ATATTCCGAATAGGAATCGGTGCGCCTGCTGGCCAACATTGCGGACACGAGCAAGGATGGACT
droSec2 scaffold_4:5099362-5099606 - dse_1309 CGG-GGCAGTTTCTTTTACGGC-CC--CCGTTTATCTGCCC-ATTAGAGAGTAACTACCG----------GTCTAATGTCCACTCGAAAGAGATTAACCTGTCACTGAAAGAAATACTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGAT---G-----AAA----------------CGATAGCTT--AGTGACTTTCTAGTTCCCCAT------------------------TTAAAACAGCACCAACAGTACATTTA------------------------------------------------------------------ATCAACCAACATT----------------------------------------------------------------------------ATATTCCGAATAGGAATCGGTGCGCCTGCTGGCCAACATTGCAGACACGAGCAAGGATGGACT
dm3 chr3R:26274881-26275143 - CGGGGGCAGTTTCTTTTACGGCTCC--CCGTTTATCACCCC-ACTAGAGAGTAACTACCTAATGTCTAATGTCTAATGTCCACTCGAAAGAGATTAACCTGTCACTCGAAGAAATACCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAT---G-----AA--------------------TTGCTTTTAGTGACTTTCTAGTTCCCCATCACATGTCTG-------AAGTTATTTAA---------AACAGTACATTTA------------------------------------------------------------------ATCAACCAACATT----------------------------------------------------------------------------ATATTTCGAATAGGAATCGGTGCGCCTGCTGGCCAACATTGCGGACACGAGCAAGGATGGACT
droEre2 scaffold_4820:1736503-1736723 + CGGGGGCAGTTC-----------AC--CCGTTTATCTGCCC-ATTAG-GGGTAACTACTG----------GTCTAATGTCCACTCGAAAGAGATTAACCTGCCACTGGAAGAAGTGCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC---------------------CT----------------------------TAGTTCCCCGTCACATGTTTGTTGTGCAAAGATTTACC------A---GGAG------CTA------------------------------------------------------------------ATCAACCAACGTT----------------------------------------------------------------------------ATATTTCGCATAGGAATCGGTGCGCCTACTGGCCAACATTGCGGACACCAGCAAGGATGGACT
droYak3 3R:27193306-27193543 - CGGGGGCAGTTTCTTTTACGGC-CC--CCGTTTATCTTCCC-ATTAGGGAGTAACTACCG----------GTCTAATGTCCACTCGAAAGAGATTAACCTGTCACTGAAAGAAATACTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG---------------------CT----------------------------AAGTTCCCCATCACATGTTTGTTCAGTAAAGATTTTCC------A---AGCACTACATTCA------------------------------------------------------------------ATCAACCAACATT----------------------------------------------------------------------------ATTTATCGCATAGGAATCGGTGCGCCTGCTGGCCAACATTGCGGACACGAGCAAGGATGGGCT
droEug1 scf7180000409555:773004-773335 - TGG-GGCAGTTTCTT-TACGGC-CC--TCGTTT------------AGAGAGTAACTACCG----------GTCTAATGTTCAATTAATAGAGATTAACTTGTCAGTGGCAAAAGTATCA----------------------------------CAAGTAATAACTTTCAAACAAATTCTAAAGGTTTTTACTTTCTCATATATAGTATTTTGTTATCTTATCACTACTTTCATATTGTTTGTTGA---------------------------------------------------------AAAT---A-----AA--------------------------------------------------------------TGTCATCATTCATC------T---GGAA------ATG------------------------------------------------------------------ATC-------ATTACATCTACCTTTGTTAAACCGA-GTATAAA--------------ACCAACTTTTATTTAAA-----------TTCGATTTTCTGATTAGGAATCGGTGCGCCTGCTGGCAAACATTGCGGACACGAGCAAGGATGGGCT
droBia1 scf7180000302113:1103227-1103502 + --GGGGCAGTTTCTTTTACGGC-CC--CCGTTTATCTCCCC-GCTGGGGAGGCACTACCG----------GTCTAATGTCCAATTAAGGGGGATTAGCCTGTCACTGCGAATAACGTTATATACTGATTTTAGGAATAGTTGTAAGGCCATCTC-------------------------AAAGGT---------------------------------------------------GTGTCTTGATAGCTGATTGTACCTTATCAGCTCTTGGCTTTATAGTAAACAATCTTGAATCTCTATAAAT---G-----AA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCAATAGGAATCGGTGCGCCTGCTGGCAAACATTGCGGACACCAGCAAGGATGGACT
droTak1 scf7180000415367:560728-560836 + TGGGGGCAATTTCTTTTACGGCCCC--CCCTTTATCTCCTTTATTAAAGAGTGACTACCG----------GTCTAATGTCCAATTAACAAAGATTAACCTGTCACTGCCAAAA-A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491280:2583677-2583780 - TGGGGGCAATTTCTTTTCCGGC-C---GCGTTTATCTCAAT-ATTTGAGAGAGACTACTG----------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTAATGTTCAATTAAAAGCGATTAACCTTTCACT---GGGAAAAAA-ATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000780069:131961-132067 - TGGGGGCAGTTTCTTTTCCGGC-CC--GCATTTATCTCAAT-ATTAGGGGGAGACTACTG----------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTAATGTTCAATTAAAAGAGATTAACCTGTCACT---GGGAAAAAATATTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454106:207644-207837 + TGGGGGCAGTTTCTTTTACGGC-C---CCGTTTATCTGCCC-ATTA-AGGGTGACTACCG----------GAC-AATGTCCAATTAAAAGAGATTAGCCCGCCACTTCGGAAA-TG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTATAATT---G-----AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAACATT-----------------------------------------------------------------GCTCCTGTTCCATTTTCTGCATAGGAATCGGTGCGCCTGCTGGCCAACATTGCCGACACAAGCAAGGATGGACT
droKik1 scf7180000302390:221569-221693 - CGGGGGCAGTTTCTTTTACGGC-CC--CCGTTTATCTCCCC-ATTATAGGGTGACTACCG----------GTCTAATGTCCAATTAAATAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGATTAACCTTTTATTTAGGGGTAAAAATATCAAGAAAATAATAGC--------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_12911:4725255-4725561 + TGGGGGCAGTTTCTTTTATTGGCCT--CTGTTTATCTCATCAATTAAAAAGCGACTACCG----------GTCTAATGTCCAATAAACGATGATTAACCTTTCACTATTTAAA-CA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT-TATTATTGGGGATCAGAAATAATTGGATTAGGAATCAGT-----------------------------AGATCTTTGCT----------TTTCC------TACCAATACTTTATGTA------------------------------------------------------------------ATCGACCAAT---------------------CCAA-ATATAAACAACATTTATGCTTTTCAACCTTTTTTCAAACTTTCCATATTTTGTATTTTCTGGACAGGAATCGGTGCGCCTGTTCGCTGGCATTGCCGATACGAGCAAGGATGGACT
droBip1 scf7180000396640:1563168-1563460 + TGGGGGCAGTTTCTTTTATTGGCCT--TTGTTTATCTCACCAATTAAATAGCCACTACCG----------GTCTAATGTCCAATAAACGCCGATTAACCTTTCACTGGTAAAA-T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAATAATT---A------------TGGATTAGGAATCAGT-----------------------------ACATCTTTGCT----------TTTTC------TACCAATACTCTGTGTA------------------------------------------------------------------ATAGACTCAT---------------------CCAAAACACAAACAACATTTATGCTTTTCAACCTATTTCCAAACGTACCATATTTTGTATTTTCTGGACAGGAATCGGTGCGCCTCTTTGCCGGCATTGCCGATACGAGCAAGGATGGACT
dp5 2:1250763-1250814 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGATTCGGTACGCCTGCTGGCAGGCATCGCGGACACAAGCAAGGATGGACT
droPer2 scaffold_7:4051329-4051380 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGATTCGGTACGCCTGCTGGCAGGCATCGCGGACACAAGCAAGGATGGACT
droWil2 scf2_1100000004943:9775552-9775605 - ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGGAATCGGTACGTCTATTGGCTGGCATAGCCGATACTAGTAAGGATGGACT
droVir3 scaffold_13047:15828406-15828481 - TTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACATTGAACCTT----------------------------------------------------------------------------GTTTTTC---CAGGAATCGGTGCGTCTGCTTGCCGGCATTGCGGATACGAGCAAAGATGGCCT
droMoj3 scaffold_6540:19340646-19340697 - ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAATCGGTGCGCCTGCTCGCCGGCATTGCGGACACGAGCAAAGATGGCCT
droGri2 scaffold_14830:4181076-4181127 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAATCGGTGCGTCTGCTGGCCGGCATTGCGGACACTAGCAAAGATGGACT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CGGGGGCAGTTTCTTTTACGGC-CCCTCGGTTTATCTGCCC-ATTAGAGAGTAACTACCG----------GTCTAATGTCCACTCGAAAGAGATTAACCTGTCACTGAAAGAAATACTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGAT---G-----AAA----------------CGATAGCTTTCAGTGACTTTCTAGTTCCCCGT------------------------TCAAAGCAGCCCAAACAGTACATTTA------------------------------------------------------------------ATCAACCAACATT----------------------------------------------------------------------------ATATTCCGAATAGGAATCGGTGCGCCTGCTGGCCAACATTGCGGACACGAGCAAGGATGGACTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGAGCAAGGATGGACT1819.00905400000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACACGAGCAAGGATGGACT2114.00412100000000000000
......................................................................................AAAGAGATTAACCTGTCACTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.00431000000000000000
.......................................................................................AAGAGATTAACCTGTCACTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00321000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGACACGAGCAAGGATGGACT2213.00312000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGACACGAGCAAGGATG....1812.00220000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGACACGAGCAAGGATGGAC.2112.00211000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCGGACACGAGCAAGGATGGACT2512.00202000000000000000
........................................................................................AGAGATTAACCTGTCACTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00202000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCGGACACGAGCAAGGATG....2111.00100000000000001000
...................................................................................TCGAAAGAGATTAACCTGTCACTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
.........................................................................................GAGATTAACCTGTCACTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
............................................TAGAGAGTAACTACCG----------GTCTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCGGACACGAGCAAGGATGGACT2611.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCGGACACGAGCAAGGA......1911.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................................................................CGT------------------------TCAAAGCAGCCCAAACAGTA................................................................................................................................................................................................................................2311.00100000100000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................CAGTACATTTA------------------------------------------------------------------ATCAACCAAC..............................................................................................................................................2111.00100000100000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACACGAGCAAGGATGGACT2011.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGACACGAGCAAGGATGGA..2011.00110000000000000000
................................................................................................................................................................................................................................................................................................................................................ATAGCTTTCAGTGACTTTCTAGTTC.................................................................................................................................................................................................................................................................................2511.00110000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGAGCAAGGATGGACC1811.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACACGAGCAAGGATGGAC.2011.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAATAGGAATCGGTGCGCCT....................................2111.00101000000000000000
....................................................................................................GTCACTGAAAGAAATACTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG...........................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
droSec2
CGG-GGCAGTTTCTTTTACGGC-CC--CCGTTTATCTGCCC-ATTAGAGAGTAACTACCG----------GTCTAATGTCCACTCGAAAGAGATTAACCTGTCACTGAAAGAAATACTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGAT---G-----AAA----------------CGATAGCTT--AGTGACTTTCTAGTTCCCCAT------------------------TTAAAACAGCACCAACAGTACATTTA------------------------------------------------------------------ATCAACCAACATT----------------------------------------------------------------------------ATATTCCGAATAGGAATCGGTGCGCCTGCTGGCCAACATTGCAGACACGAGCAAGGATGGACTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................AAATACTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGAT---G-----AAA----------------CGAT........................................................................................................................................................................................................................................................................................................2114.0040400
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAACATTGCAGACACGAGCAAG........2512.0020110
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGACACGAGCAAGGATGGTT.2311.0010100
............................................................................................................................................................................................................................................................................................................................................................................AT------------------------TTAAAACAGCACCAACAGT.................................................................................................................................................................................................................................2111.0010100
.......................................................TACCG----------GTCTAATGTCCACTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T----------------------------------------------------------------------------ATATTCCGAATAGGAATCGGTGCG.......................................2511.0010001
......................................................................................AAAGAGATTAACCTGTCACTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
...................................CTGCCC-ATTAGAGAGTAACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001
...........................................TTAGAGAGTAACTACCG----------GTCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
................................................................................................................AATACTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGAT---G-----AAA----------------CGATA.......................................................................................................................................................................................................................................................................................................2111.0010100
........................................C-ATTAGAGAGTAACTACCG----------G...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
...........................................................................................................................................................................................................................................................................................................................AAA----------------CGATAGCTT--AGTGACTTT........................................................................................................................................................................................................................................................................................2111.0010001
..............................TTTATCTGCCC-ATTAGAGAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
....................................................................................................................................................................................................................................................................................................................................................................................................................ACAGTACATTTA------------------------------------------------------------------ATCAACCA................................................................................................................................................2011.0011000
dm3
CGGGGGCAGTTTCTTTTACGGCTCC--CCGTTTATCACCCC-ACTAGAGAGTAACTACCTAATGTCTAATGTCTAATGTCCACTCGAAAGAGATTAACCTGTCACTCGAAGAAATACCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAT---G-----AA--------------------TTGCTTTTAGTGACTTTCTAGTTCCCCATCACATGTCTG-------AAGTTATTTAA---------AACAGTACATTTA------------------------------------------------------------------ATCAACCAACATT----------------------------------------------------------------------------ATATTTCGAATAGGAATCGGTGCGCCTGCTGGCCAACATTGCGGACACGAGCAAGGATGGACTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCGGACACGAGCAAGGATGG...2316.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000420000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCGGACACGAGCAAGGATG....2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGCCAACATTGCGGACACGAGCAAGG.......2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGAATAGGAATCGGTGCGC......................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCGGACACGAGCAAGGATGGAC.2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000001000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGGTGCGCCTGCTGGCCAACA.........................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTGCGGACACGAGCAAGG.......2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................CTAGAGAGTAACTACCTAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCGGACACGAGCAAGGATGGACT2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACATTGCGGACACGAGCAAGGATGG...2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCGGACACGAGCAAGGATGGAC.2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................................................................................GAAAGAGATTAACCTGTCACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAACATTGCGGACACGA.............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACCAACATT----------------------------------------------------------------------------ATATTTCGA......................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACACGAGCAAGGATGGACT2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGGACACGAGCAAGGATGGA..2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGACACGAGCAAGGATG....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGCGGACACGAGCAAGGATGGACT2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGGTGCGCCTGCTGGCCAACATTGC.....................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATTGCGGACACGAGCAAGGATGG...2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................AT---G-----AA--------------------TTGCTTTTAGTGAGG..........................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCAACATTGCGGACACGAG............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................CTAATGTCCACTCGAAAGAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCGGTGCGCCTGCTGGCCAA...........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAACATTGCGGACACGAGCAAG........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCAACATTGCGGACACGAGCAAG........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGACACGAGCAAGGATGGATC2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................GAGAGTAACTACCTAATGTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGGCCAACATTGCGGACACGAGCAA.........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTGCGGACACGAGCAAGGATGGAC.2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TTTATCACCCC-ACTAGAGAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCCTGCTGGCCAACATTGCGGA..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGGACACGAGCAAGGATG....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGGTGCGCCTGCTGGCCAAC..........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACATTGCGGACACGAGCA..........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCGGACACGAGCAAGGATGGA..2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTGCGGACACGAGCAAGGATG....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGGTGCGCCTGCTGGCCAA...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATTGCGGACACGAGCA..........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATCGGTGCGCCTGCTGGCC.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................G-----AA--------------------TTGCTTTTAGTGACT..........................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGACACGAGCAAGGATGG...1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAACATT----------------------------------------------------------------------------ATATTTCGAATAG..................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CGGGGGCAGTTC-----------AC--CCGTTTATCTGCCC-ATTAG-GGGTAACTACTG----------GTCTAATGTCCACTCGAAAGAGATTAACCTGCCACTGGAAGAAGTGCCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC---------------------CT----------------------------TAGTTCCCCGTCACATGTTTGTTGTGCAAAGATTTACC------A---GGAG------CTA------------------------------------------------------------------ATCAACCAACGTT----------------------------------------------------------------------------ATATTTCGCATAGGAATCGGTGCGCCTACTGGCCAACATTGCGGACACCAGCAAGGATGGACTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATTGCGGACACCAGCAAGGATG....2512.0020002000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGGACACCAGCAAGGATGG...2111.0010001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCGGACACCAGCAAGGATGGACT2511.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................TTGTTGTGCAAAGATTTACC------...........................................................................................................................................................................................................................................2011.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................TTTACC------A---GGAG------CTA------------------------------------------------------------------ATCAACC.................................................................................................................................................2111.0010000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCAACATTGCGGACACCAGC...........2311.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGACACCAGCAAGGATGGAC.2211.0010100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACATTGCGGACACCAGCAA.........2211.0010000100
droYak3
CGGGGGCAGTTTCTTTTACGGC-CC--CCGTTTATCTTCCC-ATTAGGGAGTAACTACCG----------GTCTAATGTCCACTCGAAAGAGATTAACCTGTCACTGAAAGAAATACTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGG---------------------CT----------------------------AAGTTCCCCATCACATGTTTGTTCAGTAAAGATTTTCC------A---AGCACTACATTCA------------------------------------------------------------------ATCAACCAACATT----------------------------------------------------------------------------ATTTATCGCATAGGAATCGGTGCGCCTGCTGGCCAACATTGCGGACACGAGCAAGGATGGGCTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................ATTAGGGAGTAACTACCG----------GTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACACGAGCAAGGATGGGCT2011.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCGGTGCGCCTGCTGGC..............................1911.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCAACATT----------------------------------------------------------------------------ATTTATCGCATAG..................................................2311.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACGAGCAAGGATGGGCT1911.00100000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATTGCGGACACGAGCAAG........2211.00100000010000
droEug1
TGG-GGCAGTTTCTT-TACGGC-CC--TCGTTT------------AGAGAGTAACTACCG----------GTCTAATGTTCAATTAATAGAGATTAACTTGTCAGTGGCAAAAGTATCA----------------------------------CAAGTAATAACTTTCAAACAAATTCTAAAGGTTTTTACTTTCTCATATATAGTATTTTGTTATCTTATCACTACTTTCATATTGTTTGTTGA---------------------------------------------------------AAAT---A-----AA--------------------------------------------------------------TGTCATCATTCATC------T---GGAA------ATG------------------------------------------------------------------ATC-------ATTACATCTACCTTTGTTAAACCGA-GTATAAA--------------ACCAACTTTTATTTAAA-----------TTCGATTTTCTGATTAGGAATCGGTGCGCCTGCTGGCAAACATTGCGGACACGAGCAAGGATGGGCTSizeHit CountTotal NormTotal
No Reads
droBia1
--GGGGCAGTTTCTTTTACGGC-CC--CCGTTTATCTCCCC-GCTGGGGAGGCACTACCG----------GTCTAATGTCCAATTAAGGGGGATTAGCCTGTCACTGCGAATAACGTTATATACTGATTTTAGGAATAGTTGTAAGGCCATCTC-------------------------AAAGGT---------------------------------------------------GTGTCTTGATAGCTGATTGTACCTTATCAGCTCTTGGCTTTATAGTAAACAATCTTGAATCTCTATAAAT---G-----AA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCAATAGGAATCGGTGCGCCTGCTGGCAAACATTGCGGACACCAGCAAGGATGGACTSizeHit CountTotal NormTotal
No Reads
droTak1
TGGGGGCAATTTCTTTTACGGCCCC--CCCTTTATCTCCTTTATTAAAGAGTGACTACCG----------GTCTAATGTCCAATTAACAAAGATTAACCTGTCACTGCCAAAA-A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA----------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TGGGGGCAATTTCTTTTCCGGC-C---GCGTTTATCTCAAT-ATTTGAGAGAGACTACTG----------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTAATGTTCAATTAAAAGCGATTAACCTTTCACT---GGGAAAAAA-ATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TGGGGGCAGTTTCTTTTCCGGC-CC--GCATTTATCTCAAT-ATTAGGGGGAGACTACTG----------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCTAATGTTCAATTAAAAGAGATTAACCTGTCACT---GGGAAAAAATATTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TGGGGGCAGTTTCTTTTACGGC-C---CCGTTTATCTGCCC-ATTA-AGGGTGACTACCG----------GAC-AATGTCCAATTAAAAGAGATTAGCCCGCCACTTCGGAAA-TG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTATAATT---G-----AA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTAACATT-----------------------------------------------------------------GCTCCTGTTCCATTTTCTGCATAGGAATCGGTGCGCCTGCTGGCCAACATTGCCGACACAAGCAAGGATGGACTSizeHit CountTotal NormTotal
No Reads
droKik1
CGGGGGCAGTTTCTTTTACGGC-CC--CCGTTTATCTCCCC-ATTATAGGGTGACTACCG----------GTCTAATGTCCAATTAAATAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGATTAACCTTTTATTTAGGGGTAAAAATATCAAGAAAATAATAGC--------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
TGGGGGCAGTTTCTTTTATTGGCCT--CTGTTTATCTCATCAATTAAAAAGCGACTACCG----------GTCTAATGTCCAATAAACGATGATTAACCTTTCACTATTTAAA-CA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT-TATTATTGGGGATCAGAAATAATTGGATTAGGAATCAGT-----------------------------AGATCTTTGCT----------TTTCC------TACCAATACTTTATGTA------------------------------------------------------------------ATCGACCAAT---------------------CCAA-ATATAAACAACATTTATGCTTTTCAACCTTTTTTCAAACTTTCCATATTTTGTATTTTCTGGACAGGAATCGGTGCGCCTGTTCGCTGGCATTGCCGATACGAGCAAGGATGGACTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGCATTGCCGATACGAGCA..........2212.002000002
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATTGCCGATACGAGCAAG........2111.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACGAGCAAGGATGGA..1811.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCGCTGGCATTGCCGATACGA.............2311.001100000
droBip1
TGGGGGCAGTTTCTTTTATTGGCCT--TTGTTTATCTCACCAATTAAATAGCCACTACCG----------GTCTAATGTCCAATAAACGCCGATTAACCTTTCACTGGTAAAA-T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAATAATT---A------------TGGATTAGGAATCAGT-----------------------------ACATCTTTGCT----------TTTTC------TACCAATACTCTGTGTA------------------------------------------------------------------ATAGACTCAT---------------------CCAAAACACAAACAACATTTATGCTTTTCAACCTATTTCCAAACGTACCATATTTTGTATTTTCTGGACAGGAATCGGTGCGCCTCTTTGCCGGCATTGCCGATACGAGCAAGGATGGACTSizeHit CountTotal NormTotal
No Reads
dp5
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGATTCGGTACGCCTGCTGGCAGGCATCGCGGACACAAGCAAGGATGGACTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTGCTGGCAGGCATCGCGGA..................2311.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCGGTACGCCTGCTGGCA.............................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCGGACACAAGCAAGGATGGA..2211.0010000000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATCGCGGACACAAGCAAGGAT.....2411.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCGGACACAAGCAAGGATGGACT2511.0010000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCGGACACAAGCAAGGATGGACT2611.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTACGCCTGCTGGCAGGCATCGCGGAC.................2911.0010000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCGGACACAAGCAAGGATGGAC.2411.0010000000100
droPer2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGATTCGGTACGCCTGCTGGCAGGCATCGCGGACACAAGCAAGGATGGACTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAAGCAAGGATGGACT1813.003300000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCATCGCGGACACAAGCAAG........2213.003300000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCGCGGACACAAGCAAGGATGGACT2712.002200000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTACGCCTGCTGGCAGGCATCGCGGG..................2811.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGACACAAGCAAGGATG....1811.001100000
droWil2
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGGAATCGGTACGTCTATTGGCTGGCATAGCCGATACTAGTAAGGATGGACTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCTATTGGCTGGCATAGCC....................2112.00200020
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGTCTATTGGCTGGCATAGCCGA..................2511.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTACGTCTATTGGCTGGCATAGCC....................2611.00101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCCGATACTAGTAAGGATGGA..2411.00100100
droVir3
TTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACATTGAACCTT----------------------------------------------------------------------------GTTTTTC---CAGGAATCGGTGCGTCTGCTTGCCGGCATTGCGGATACGAGCAAAGATGGCCTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGCGTCTGCTTGCCGGCATTGCGGATA................2912.002200000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCGGATACGAGCAAAGATGGC..2311.001000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGGTGCGTCTGCTTGCCGGC..........................2211.001000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCGTCTGCTTGCCGGCATTGCGGA..................2611.001000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTGCGGATACGAGCAAAGAT.....2311.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTGCCGGCATTGCGGATAC...............2111.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAATCGGTGCGCCTGCTCGCCGGCATTGCGGACACGAGCAAAGATGGCCTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATTGCGGACACGAGCA..........1911.001000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACGAGCAAAGATGGCCT1911.001000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATTGCGGACACGAGCAAAGAT.....2411.001100000
droGri2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGAATCGGTGCGTCTGCTGGCCGGCATTGCGGACACTAGCAAAGATGGACTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTGCGTCTGCTGGCCGGCA.........................2111.00110

Generated: 05/18/2015 at 09:59 AM