ID:

dsi_6190

 Coordinate:

2l:111973-112122 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [2l_111855_111972_-]; CDS [2l_111855_111972_-]; intron [2l_111973_114609_-]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCTATGTCTTTCGATTGTCAGACTTTGCAGATTTTGTTTATTTATCGGCTCTACACTTGCTCGTCCAAAATCCAATGCAATGTCTTTCTTGATAGCTGCGGCGACACTTAGGTATTGACGTAACACATATCAAAACGTGAACTATTTTTAGTCCCAACAAGAAATTGGCCCAAACACTAATTTCGTGTCTTTTATTACAGATGCCAAGACCATTCTAAAGGGCGTCAGTGGACGCCTCCGGTCTGGAGAG
**************************************************..........................(((.((((......))))..)))((.(((....(((((((.((((.............)))).)).)))))...))))).(((.((((((((........)))))))).)))............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M024
male body		 M053
female body
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
 SRR902008
ovaries
.................................................................................................................................................................................................................................CAGTGGACGCCTCCGGTCTGGAGAG 25 0 1 2.00 2 2 0 0 0 0 0 0 0
................................TTTGTTTATTTATCGGCTCTA..................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................CTAAAGGGCGTCAGTGGAC................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CATTCTAAAGGGCGTCAGTGGACG................ 24 0 1 1.00 1 0 0 1 0 0 0 0 0
......................................................................................................................................................................................................CAATGCCAAGACCATTCTAAAGGGC........................... 25 2 1 1.00 1 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GTCAGTGGACGCCTCCGGTCGG..... 22 1 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................................................................................................................................TCAGTGGACGCCTCCGGTCTGGA... 23 0 1 1.00 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................................AGACCATTCTAAAGGGCGTCAGTGGACGC............... 29 0 1 1.00 1 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................................GGACGCCTCCGGTCTGGAGAG 21 0 1 1.00 1 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................CAGTGGACGCCTCCGGTCTGGA... 22 0 1 1.00 1 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................GCAATGCCAAGACCATTCTAAAGGGC........................... 26 3 1 1.00 1 1 0 0 0 0 0 0 0
.....................................................................................TTCTTGATAGCTGAGGCGATC................................................................................................................................................ 21 3 4 0.25 1 0 0 0 1 0 0 0 0
..........TCGATCGTCAGACTTGGG.............................................................................................................................................................................................................................. 18 3 20 0.20 4 0 0 0 0 4 0 0 0
................GTCAGACTTTGAAGA........................................................................................................................................................................................................................... 15 1 5 0.20 1 0 0 0 0 0 1 0 0
................GTCAGACTTTGCGGA........................................................................................................................................................................................................................... 15 1 6 0.17 1 0 0 0 1 0 0 0 0
..........TCGATCGTCAGACTTGG............................................................................................................................................................................................................................... 17 2 8 0.13 1 0 0 0 0 1 0 0 0
..........................................................................................GATAGCTGTGGGGACAC............................................................................................................................................... 17 2 9 0.11 1 0 0 0 1 0 0 0 0
..........TCGATTGTCAGAATTGG............................................................................................................................................................................................................................... 17 2 20 0.10 2 0 0 0 2 0 0 0 0
.................................................................................................................................................................................................................CCAGTCTAAAGGGCGTCGA...................... 19 3 12 0.08 1 0 0 0 1 0 0 0 0
..............TGGTCAGACTTTGAAGA........................................................................................................................................................................................................................... 17 2 13 0.08 1 0 0 0 0 0 1 0 0
.................................................................................................GCGGCGACTCTTTGGTA........................................................................................................................................ 17 2 14 0.07 1 0 0 0 1 0 0 0 0
......................................................................TCCAGTTCAATGTCTTTC.................................................................................................................................................................. 18 2 15 0.07 1 0 0 0 1 0 0 0 0
.............ATTGTTACACTTTGAAGATTT........................................................................................................................................................................................................................ 21 3 16 0.06 1 0 1 0 0 0 0 0 0
.................................................................................................................ATTGACGGAACTCATATCC...................................................................................................................... 19 3 16 0.06 1 1 0 0 0 0 0 0 0
.....................................................................................TTCTTGATAGCTGGG...................................................................................................................................................... 15 1 20 0.05 1 0 0 0 1 0 0 0 0
...........................................TTCGACTCTACACTTG............................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 1 0 0 0
................................................................................................................................................................................................................ATAATTCTAAAGGGCGACA....................... 19 3 20 0.05 1 0 0 0 0 0 0 0 1
..........TCGATCGTCAGACTTG................................................................................................................................................................................................................................ 16 2 20 0.05 1 0 0 0 0 1 0 0 0
........................CCGCCGATTTTGTTTATTTAT............................................................................................................................................................................................................. 21 3 20 0.05 1 0 0 0 0 0 0 1 0

Anti-sense strand reads

CGATACAGAAAGCTAACAGTCTGAAACGTCTAAAACAAATAAATAGCCGAGATGTGAACGAGCAGGTTTTAGGTTACGTTACAGAAAGAACTATCGACGCCGCTGTGAATCCATAACTGCATTGTGTATAGTTTTGCACTTGATAAAAATCAGGGTTGTTCTTTAACCGGGTTTGTGATTAAAGCACAGAAAATAATGTCTACGGTTCTGGTAAGATTTCCCGCAGTCACCTGCGGAGGCCAGACCTCTC
**************************************************..........................(((.((((......))))..)))((.(((....(((((((.((((.............)))).)).)))))...))))).(((.((((((((........)))))))).)))............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M023
head
 O001
Testis
 SRR553488
RT_0-2 hours eggs
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
..........................................................CGAGCAGGTTTTAGGTTACG............................................................................................................................................................................ 20 0 1 3.00 3 3 0 0 0 0 0 0
............................................................GGCAGGTTTTAGGTTACGTTA......................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0
..................................................................................................................................................................TTAACCGGGTTTGTGATT...................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0
..........................................................CGAGCAGGATTTAGATTA.............................................................................................................................................................................. 18 2 2 0.50 1 0 0 0 0 1 0 0
.........AAGCTAGCAGTCTGA.................................................................................................................................................................................................................................. 15 1 3 0.33 1 0 0 0 0 0 1 0
..............................................................CAAGTTTTAGGTTATGTT.......................................................................................................................................................................... 18 2 20 0.15 3 0 0 0 3 0 0 0
.............................................................GCAAGTTTTAGGTTATGTT.......................................................................................................................................................................... 19 2 8 0.13 1 0 0 0 1 0 0 0
..............................................................CAAGTTTCAGGTTACGTTTC........................................................................................................................................................................ 20 3 10 0.10 1 0 0 0 1 0 0 0
............................................................GGCAAGTTTTAGGTTATGTT.......................................................................................................................................................................... 20 3 20 0.10 2 0 0 0 2 0 0 0
.............................................................GCAAGTTTTAGGTTATG............................................................................................................................................................................ 17 2 20 0.10 2 0 0 0 2 0 0 0
.............................................................GCAAGTTTTAGGTTA.............................................................................................................................................................................. 15 1 20 0.05 1 0 0 0 1 0 0 0
......................................................TGAAAGTTCAGGTTTTAGGTT............................................................................................................................................................................... 21 3 20 0.05 1 1 0 0 0 0 0 0
...................................................................................................................................................AATCAGGGTTAGTCTTTC..................................................................................... 18 3 20 0.05 1 0 0 0 1 0 0 0
........................................................................................................................................................GGGTTATTCTTTCACCG................................................................................. 17 2 20 0.05 1 0 0 0 1 0 0 0
.................................................................GTTTCAGGTTACGTT.......................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 1 0
........................................................................................................................................................AGGTTGGTCTTTAACCGTG............................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:111923-112172 - dsi_6190 G-CTATGTCTTTCGATTGTCAGACTT--TGCAG--ATTTTGTTTATTTATCGGCT--CTAC---------------------------ACTTGCTCGTCCAA-------------------------------------AATCCAATGCAA-----T-GTCTTTCTTGATAGCT-----------------------------------------GCGGCGACACTT--------AGGT--ATTGACGTAACACAT----------------ATCAAAA-------------------CGTG-----AACTATTTTTAG------TCCCAACAAGAAATTGGCCCA--AACACTAATTT-----CGTGTC----TTTTATTACAGATGCCAAGACCATTCTAAAGGGCGTCAGTGGACGCCTCCGGTCTGGAGAG
droSec2 scaffold_14:125085-125334 - G-CTATGTCTTTCGATTGTCAGACTT--TGTAG--ATTTTGTTTATTTATCGGCT--CTAC---------------------------ACTTGCTCGTCCAA-------------------------------------AATCCAATGCAA-----T-GTCTTTCTTGATAGCT-----------------------------------------GCGGCGACACTT--------AGGT--ATTGACGTAACACAT----------------ATCAAAA-------------------CGCG-----AACTATTTTTAG------TCCCAACAAGAAATTGGCCCA--AACACTAATTT-----CGTGTC----TTTTATTACAGATGCCAAGACCATTCTAAAGGGCGTCAGTGGACGCCTCCGGTCTGGAGAG
dm3 chr2L:126178-126432 - G-CTATGTGTTTCGATTGTCAGACTT--TGCAG--ATTTTGTTTACCTATCGGCT--CTAC---------------------------ACTTGCTCGTCCAA-------------------------------------AAGCCAATGCAATC-AAT-ATCTTTCTTGATAGCT-----------------------------------------GCGGCGGCACTT--------AGAT--ATTGACGTAAGACAT----------------ATCAAAA-------------------CGCG-----AACTATTTTTAG------TCCCAACAAGAGATTGGCCCA--AACACTAATTT-----TGTGTG---TTTTTATTACAGATGCCAAGACCATTCTGAAGGGCGTCAGTGGACGCCTCCGGTCTGGAGAA
droEre2 scaffold_4929:155797-156044 - G-CTATGCCTTTTGATATTCAGACTT--TGCAG--ATTTTGTTTACCTATCGAAT--CTAC---------------------------ACTTGCTCGTCCAA-------------------------------------AAGCCAATGCAA-----T-GTCTTTCTTGATAGCT-----------------------------------------GTGGCGGCACTA--------G-GT--ATTGACGTAAGACCT----------------CTCAAAA-------------------CCCG-----AACTATTTTTAG------CCTTAACAAGAGATTGGC-CA--AACACTAATTT-----CGTGTC----TTTTATTACAGATGCCAAGACCATTCTGAAGGGCGTCAGTGGACGCCTCCGGTCTGGAGAG
droYak3 2L:115186-115429 - G-CTATGCCTTTTGACTGTCAGACTT--TGCAG--ATTTTGTTTACCTAT------------------------------------------GCTCGTCCAA-------------------------------------TAGCCAATGCAA-----T-GTCTTACTCGATAGCT-----------------------------------------GCTGCGGCACTTAGGTCT-TAGGT--ATTGACGTAAGACCT----------------ATCAAAA-------------------CCCG-----AACTATTTTTAG------CCTCAACAAGAGATTGGCCCA--AACACTAATTT-----CGTGTC----TTTTATTACAGATGCCAAGACCATTCTGAAGGGCGTCAGCGGACGCCTCCGGTCTGGAGAG
droEug1 scf7180000409154:117079-117297 - A-ATATGTCTTTTGATTGTCACATTT--TCCAA--AG------------------------------------------------------TGCTCATCTGA-------------------------------------ATGCCAATGCAA-----C-GCCTTCTTTGACAGCG--------------CCGC------------------TTTAAGTGGCGGCTCTT--------GCGTTTAATGACGTAAGGCCA----------------ATCAAAA-------------------AGTC-----AACTATTTATAG------TCTCAA-------------------TTTTAATTT-----TGTGCC----TTTTGTTACAGATGCCAAGACAATTCTGAAGGGCGTCAGTGGACGCCTCCGGTCGGGAGAG
droBia1 scf7180000301547:148714-148981 + G-TTATGCCTTTTGATTGTCAGTCTT--CGCAA--ATTTTGTTTACCTATCGGCT--ATAC---------------------------ACTTGCTCGTCTGA-------------------------------------TGACCAGTGCAG-----C-GTCTTATTTGATAGTTTTAGCGGAT------CGCA-----------------GCCGACTG-CCGCACTT--------G-GCTCAATGACGTACAACCA----------------ATCAAGC-------------------CGCC-----AACTATTTTTAG------TCTCAAAAAGAGATTGGCCCA--AACACTAATTT-----CGTGCC----TTTTATTACAGATGCCAAGACCATTCTGAAGGGCGTCAGTGGACGCCTCCGGTCGGGAGAG
droTak1 scf7180000413017:435112-435394 + G-TTATGCCTTTTGATTGTCAGACTT--TGCAA--ATTTTGTTTACCTATCGGCT--CTAC---------------------------ACTTGCTCGTCCGA-------------------------------------TGACCGATGCAG-----C-GCCTTGTTTGATAGTTTG-------GTACT-----TCCAGCGGTACCTCATCGTCGAGTGGCGGCACTT--------GGGTTCAATGACGTAAGACCA----------------ATCAAAC----------C-A------AGCC-----AACTATTTTTAG------CCCCAACGAGAGATTGTTGCA--AACACTAATTT-----CGTGCC----TTTTATTACAGATGCCAAGACCATTCTGAAGGGCGTCAGTGGGCGCCTCCGGTCGGGAGAG
droEle1 scf7180000490216:42908-43181 - G-TTATGCCTTTTGATTGTCAGACTT--TGCAA--A-TTTGTTTATCTATCGGCT--CTAC---------------------------ACTTGCTCGTCCGA-------------------------------------TGACCAATGCAACT-AGC-GTTTTATTTGTAAGTTTGTACGGAG-----CCGCA-----------------GTCGAGTGGAGGCACTT--------GGGTTCAATGATGTAAGACCA----------------ATCAAAC-------------------TGCC-----AACTATTTGTAG------TTTTAACGAGAGACTGGCCCA--AGCACTAATTT-----CTTGTC----TCTTGTTACAGATGCCAAGACCATTCTAAAGGGTGTGAGTGGACGCCTCCGGTCGGGAGAG
droRho1 scf7180000779252:134088-134360 - G-CTATGCCGTTGGATTGAGAGACTT--TGCAA--A-TTTGTTTATCTATCGGCT--CTAC---------------------------ACTTGCTCGTCCAA-------------------------------------AGACCAATGCAGCC-ACC-GCTTTTTTTGATAGTTTCTACGGAG-----CCGCA-----------------GTGAAGTGGAGGCACTT--------GGGTTCAATGACGTAAGACAC----------------ATTAAAA-------------------CGCC-----AACTATTTTTAG------CTTTAACGAGAGATTGGCCCA--ATCACTAATTT-----CATGTC----T-TTATAACAGATGCCAAGACCATTCTGAAGGGTGTCAGTGGACGCCTCCGGTCGGGAGAG
droFic1 scf7180000453904:1425334-1425618 - G-CTATGCCTTTTGATTGTCAGACTT--TTCAT--A-TTTGTTTACCTATCGGCT--CTTC---------------------------ACTGGCTCGTCTGA-------------------------------------TGACCAATGCAG-----C-G-CTTATTTGCTAGTTTATTCGGAG-----CCGCA-----------------TTCAAGTAGCAGCACTT--------GGGTTCAATGACGTAAGATCTAACTCAACCCAAACCAAACCAAA-------------------CGCC-----GACTATTTTTAG------TCTCAATGAGAGATTGGCCCA--AACACTAATTT-----CGTGGC----TTTTATTACAGATGCCAAGACCATTCTGAAGGGCGTCAGCGGACGCCTCCGGTCGGGAGAG
droKik1 scf7180000302570:989379-989657 - GGCTCTGTTGTTCGATTGTCAAATAT--TTCGCGATTTTTGTTTACCTCTCAAGC-TCTTG-------------CCT-------CC--ACCTCC----------------------------------GCCTCCACCAATGACCCATGCAGCTGAGCCG-CTTCTTTGATAGTTTT-TCGATG-----TC---TTCAGGGG-G----T--TTCAAGTGCTGGGTACT------CTAGGCTCAATGACGTAAGC------------------------------------------------T-----TCCTATTTTTAG------TAATAACATATAAT---AACA--AGTTATATTTT-----TGTGA-----TTTTATTACAGATGCCAAGACCATTCTGAAGGGCGTCAGTGGACGCCTGCGGTCGGGAGAG
droAna3 scaffold_12916:1982787-1983094 + G-TTATGCCTTTTGATTGTCAGAGTT--TGC-G--ATTTTGTTTACCTATCGACT--CTCCACCTATGCACCCACTTCCACC------TCTCC-TTCTACCTCCACTACCACCTCCACTTCCACCTCCACTTCCATC-----------------TCC-ACTTCCACCGATAGTTTG-------G----------------G-C----T--TTCGAGTGGCCCCTCTT--------GGGTTCAACGACGCGGCGTCA---------------------GAAGGCCCATCGAAGAGCCAACGCATATCATACTATTTTTAG------TT------------------------ATTAATTT-----GGCGTCTTCGTCTCGTTACAGATGCGAAAACCATTCTGAAGGGCGTCAGCGGACGCCTCCGCTCCGGAGAG
droBip1 scf7180000396728:636630-636889 + G-TTATGCCTTTTGATTGTCAGAGTT--TGC-G--ATTTTGTTTACCTATCGACT--CTCCACCTATGCACCCACTT-------------------------------CCACCTC------------CACTTCCACC-----------------TCC-ACGTCCCCCGATAGTTTC-------G----------------G-C----T--CTTGAGTGGCCCCTCTT--------GGGTTCAACGACGTCAGAAGC----------------CCCATCA----------CAG-GCCAGCGGA-----GACTATTTTTAG------TT------------------------ATTAATTT-----GGTGCT-TCGTTTCGTTACAGATGCCAAAACCATTCTGAAGGGCGTCAGCGGCCGCCTCCGCTCCGGAGAA
dp5 4_group2:149868-150129 - G-TTATGCTGTTTGATTGCCAGTCTTTTTTTTT--ATTTTTTTTACCTATTGACT--TCA----------------------CTTCACACTTGATCGTCCGA-------------------------------------TGAC--ATTTAA-----T-AGCT-TCGC----------------------CATA-----------------GTTAAGTGGCGGCGCTT--------G-GTTCAATAACGTTAGATTA----------------ATCATGA-------------------AGGC-----GACTATTTTTAG------GCCTGATAAAAGATTTCCCCAAAAACACTAATTT-----CATACA-TCTTGTCATTTCAGATGCCAAAACAATTCTGAAGGGCGTCAGCGGGCGCCTGCGGTCAGGAGAG
droPer2 scaffold_8:3739171-3739432 + G-TTATGCTGTTTGATTGCCAGTCTTT-TTTTT--ATTTTTTTTACCTATTGACT--TCA----------------------CTTCACACTTGATCGTCCGA-------------------------------------TGAC--ATTTAA-----T-AGCT-TCGC----------------------CATA-----------------GTTAAGTGGCGGCGCTT--------GGGTTCAATAACCGTAGATTA----------------ATCATGA-------------------AGGC-----GACTATTTTTAG------GCCTGATAAAAGATTTCCCCAAAAACACTAATTT-----CATACA-TCTTGTCATTTCAGATGCCAAAACAATTCTGAAGGGCGTCAGCGGGCGCCTGCGGTCAGGAGAG
droWil2 scf2_1100000004585:1849210-1849458 - G-GCATGTTGTTTTGTTTGTTTACTT--TATTG--ACTTT-TTGATTTAACTGTCT-TGGT---------------------------TTTGGATCGTCCAATGACCACCACCAA------------CACTTCCAGC--ACTCCAATGCAG-----C-ACTTCCCTCTATTGTCTG-------T------------------C----TATGACGAGTGTTAGCACTT--------TAGTT--------------------------------------------------------------------------TTTATTTTTAAAC---AAAAGTAATTGA--------------TTTGCTTCTTTTTT----TTTGTTTACAGATGCCAAGACCATTTTAAAGGGAGTCAGCGGTCGCCTGAGATCGGGCGAA
droVir3 scaffold_12963:17576774-17576859 + A-AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACTTA--ATTCC-CA-TT-----TGATTT----TTTTTTTCCAGAAAACAAAGACATACTGAAAGGACTCTCGGGCTACTTTCGTTCCGGCGAG
droMoj3 scaffold_6500:246918-246979 - C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCTTTCTAGCTGCCAAAACCATTTTGAAGGGTGTCAGCGGGCGCTTGCGGTCAGGAGAG
droGri2 scaffold_15252:17034793-17034851 + T-TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACAGATGCCAAAACTATTCTCAAAGGAGTCAGCGGGCGCTTGCGTTCTGGAGAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
G-CTATGTCTTTCGATTGTCAGACTT--TGCAG--ATTTTGTTTATTTATCGGCT--CTAC---------------------------ACTTGCTCGTCCAA-------------------------------------AATCCAATGCAA-----T-GTCTTTCTTGATAGCT-----------------------------------------GCGGCGACACTT--------AGGT--ATTGACGTAACACAT----------------ATCAAAA-------------------CGTG-----AACTATTTTTAG------TCCCAACAAGAAATTGGCCCA--AACACTAATTT-----CGTGTC----TTTTATTACAGATGCCAAGACCATTCTAAAGGGCGTCAGTGGACGCCTCCGGTCTGGAGAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGGACGCCTCCGGTCTGGAGAG2512.00200200000000000000
.....................................TTTGTTTATTTATCGGCT--CTA.......................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................CTAAAGGGCGTCAGTGGAC.................1911.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CATTCTAAAGGGCGTCAGTGGACG................2411.00100010000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTGGACGCCTCCGGTCTGGA...2311.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGACCATTCTAAAGGGCGTCAGTGGACGC...............2911.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GGACGCCTCCGGTCTGGAGAG2111.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGGACGCCTCCGGTCTGGA...2211.00101000000000000000
droSec2
G-CTATGTCTTTCGATTGTCAGACTT--TGTAG--ATTTTGTTTATTTATCGGCT--CTAC---------------------------ACTTGCTCGTCCAA-------------------------------------AATCCAATGCAA-----T-GTCTTTCTTGATAGCT-----------------------------------------GCGGCGACACTT--------AGGT--ATTGACGTAACACAT----------------ATCAAAA-------------------CGCG-----AACTATTTTTAG------TCCCAACAAGAAATTGGCCCA--AACACTAATTT-----CGTGTC----TTTTATTACAGATGCCAAGACCATTCTAAAGGGCGTCAGTGGACGCCTCCGGTCTGGAGAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................................................................................................................................................................ATGCCAAGACCATTCTAAAGGGCGT.........................2511.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................CCAAGACCATTCTAAAGGGCGT.........................2211.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGGACGCCTCCGGTCTGGA...2211.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................TTCTAAAGGGCGTCAGTGGACGC...............2311.0010010
.............................................................................................................................................................................................................................................................................................................................................................................................................TTCTAAAGGGCGTCAGTGGA..................2011.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGGACGCCTCCGGTCTGGAGAG2511.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................ATGCCAAGACCATTCTAAAGGG............................2211.0010010
........................................................................................................................................................................................................................................................................................................................................................................................................GACCATTCTAAAGGGCGTCAGTGGA..................2511.0010001
..........................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGGACGCCTCCGGTCT......1911.0010010
dm3
G-CTATGTGTTTCGATTGTCAGACTT--TGCAG--ATTTTGTTTACCTATCGGCT--CTAC---------------------------ACTTGCTCGTCCAA-------------------------------------AAGCCAATGCAATC-AAT-ATCTTTCTTGATAGCT-----------------------------------------GCGGCGGCACTT--------AGAT--ATTGACGTAAGACAT----------------ATCAAAA-------------------CGCG-----AACTATTTTTAG------TCCCAACAAGAGATTGGCCCA--AACACTAATTT-----TGTGTG---TTTTTATTACAGATGCCAAGACCATTCTGAAGGGCGTCAGTGGACGCCTCCGGTCTGGAGAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................TTCTGAAGGGCGTCAGTGGACGC...............23112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000010000040000000000000001000211000
.................................................................................................................................................................................................................................................................................................................................................................................................ATGCCAAGACCATTCTGAAGGGCGT.........................2514.0040000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GACCATTCTGAAGGGCGTCA.......................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TTCTGAAGGGCGTCAGTGGACGCC..............2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000300000
............................................................................................................................................................................................................................................................................................................................................................................................................ATTCTGAAGGGCGTCAGTGGACGC...............2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGACCATTCTGAAGGG............................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000010000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGTGGACGCCTCCGGT........1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGGGCGTCAGTGGAC.................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................ACCATTCTGAAGGGCGTCAGTGGA..................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGGACGCCTCCGGTCTGGA...2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TTCTGAAGGGCGTCAGTG....................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CCATTCTGAAGGGCGTCAGTGGA..................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................TACCTATCGGCT--CTAC---------------------------ACTTGCTCGTC................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................ATTCTGAAGGGCGTCAGTGGAC.................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TGGACGCCTCCGGTCTGGAGA.2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
........................................................................................................................................................................................................................................................................................................................................................................................................GACCATTCTGAAGGGCGT.........................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TGCCAAGACCATTCTGAAGGGCGTCAGT.....................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................CATTCTGAAGGGCGTCAGTGGAC.................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................ATTTTTAG------TCCCAACAAGAGA.................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGGACGCCTCCGGTCTGG....2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGTGGACGCCTCCGGTCT......2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGACCATTCTGAAGGGCGT.........................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TTCTGAAGGGCGTCAGTGGAC.................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TTTCGATTGTCAGACTT--TGCAG--ATT.............................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CTT--TGCAG--ATTTTGTTTACCTATCGGC.............................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................T--CTAC---------------------------ACTTGCTCGTCCAA-------------------------------------AAGCCAA.................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................TATCGGCT--CTAC---------------------------ACTTGCTCGTCCAA-------------------------------------AA......................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTGGACGCCTCCGGTCTGGA...2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGGACGCCTCCGGTCTGGAG..2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGGGCGTCAGTGGAC.................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................................................................................................................................TCTTGATAGCT-----------------------------------------GCGGCGGCACC.................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................T--------AGAT--ATTGACGTAAGACAT----------------ATCAAA.............................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................CTTGATAGCT-----------------------------------------GCGGCGGCACT.................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGACCATTCTGAAGGGCGTCAGTGGA..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGACGCCTCCGGTCTGGAGAA2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................TAG------TCCCAACAAGAGATTGGC............................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGGACGCCTCCGGTCTGGAGAA2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................TTTCTTGATAGCT-----------------------------------------GCGGCGGCACT.................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GACGCCTCCGGTCTGGAG..1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................CCAAGACCATTCTGAAGGGCGT.........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................AAGACCATTCTGAAGGGCGTCAGT.....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................CAAGACCATTCTGAAGGG............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TGCCAAGACCATTCTGAAGGG............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TCTGAAGGGCGTCAGTGGACGCC..............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGACGCCTCCGGTCTG.....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................TCAGACTT--TGCAG--ATTTTGTT........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TATGTGTTTCGATTGTCAGACTT--T......................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TTCTGAAGGGCGTCAGTGGACGT...............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......TGTTTCGATTGTCAGACTT--TGCAG--AT..............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGGACGCCTCCGGTCT......1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....ATGTGTTTCGATTGTCAGACT..........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
.........TTTCGATTGTCAGACTT--TGCA...................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GACCATTCTGAAGGGCGTCAGTGGA..................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................TC-AAT-ATCTTTCTTGATAGCT-----------------------------------------GCGG........................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................................AA-------------------------------------AAGCCAATGCAATC-AAT-AT...................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TGTTTCGATTGTCAGACTT--TG.....................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CATTCTGAAGGGCGTCAGTGGACGC...............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGTGGACGCCTCCGGTCTG.....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........GTTTCGATTGTCAGACTT--TGCAG--ATTT............................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........TCGATTGTCAGACTT--TGCAG--A...............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................TGCCAAGACCATTCTGAAGGGC...........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGACCATTCTGAAGGGCGTCAGTG....................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................................................................ATCTTTCTTGATAGCT-----------------------------------------GCGG........................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................GTAAGACAT----------------ATCAAAA-------------------CGCG-----AA..............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.........................................................CTAC---------------------------ACTTGCTCGTCCAA-------------------------------------AA......................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..CTATGTGTTTCGATTGTCA..............................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................GTGGACGCCTCCGGTCTGGAGAA2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTGGACGCCTCCGGTCTGGAG..2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGTGGACGCCTCCGGTCTGG....2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............ATTGTCAGACTT--TGCAG--ATT.............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................CTGAAGGGCGTCAGTGGCGC................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
G-CTATGCCTTTTGATATTCAGACTT--TGCAG--ATTTTGTTTACCTATCGAAT--CTAC---------------------------ACTTGCTCGTCCAA-------------------------------------AAGCCAATGCAA-----T-GTCTTTCTTGATAGCT-----------------------------------------GTGGCGGCACTA--------G-GT--ATTGACGTAAGACCT----------------CTCAAAA-------------------CCCG-----AACTATTTTTAG------CCTTAACAAGAGATTGGC-CA--AACACTAATTT-----CGTGTC----TTTTATTACAGATGCCAAGACCATTCTGAAGGGCGTCAGTGGACGCCTCCGGTCTGGAGAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................AAGACCATTCTGAAGGGCGTCAGTGGA..................2713.0030000210
............................................................................................................................................................................................................................................................................................................................................................................................................ATTCTGAAGGGCGTCAGTGGAC.................2212.0020000200
............................................................................................................................................................................................................................................................................................................................................................................................................ATTCTGAAGGGCGTCAGTGGACG................2312.0020000110
............................................................................................................................................................................................................................................................................................................................................................................................................................GTGGACGCCTCCGGTCTGGA...2011.0010001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGGACGCCTCCGGTCTGGAGAG2511.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGGACGCCTCCGGTCTGGA...2211.0011000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGTGGACGCCTCCGGTCTGG....2311.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGGACGCCTCCGGTCTG.....2011.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGACCATTCTGAAGGGCGT.........................1911.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................................TGCCAAGACCATTCTGAAGGGC...........................2211.0010100000
..................................................................................................................................................................................................................................................................................................................................................................................................TGCCAAGACCATTCTGAAGGGCGTCA.......................2611.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGACCATTCTGAAGGGC...........................2111.0010100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GGACGCCTCCGGTCTGGAGAG2111.0010001000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGACCATTCTGAAGGGCGTCA.......................2111.0011000000
.....................GACTT--TGCAG--ATTTTGTTTAC.....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
....................................................................................................................................................................................................................................................................................................................................................................................................CCAAGACCATTCTGAAGGGCGT.........................2211.0011000000
.....................................................................................................................................................................................................................................................................................................................................................................................................CAAGACCATTCTGAAGGGCGTC........................2211.0010100000
droYak3
G-CTATGCCTTTTGACTGTCAGACTT--TGCAG--ATTTTGTTTACCTAT------------------------------------------GCTCGTCCAA-------------------------------------TAGCCAATGCAA-----T-GTCTTACTCGATAGCT-----------------------------------------GCTGCGGCACTTAGGTCT-TAGGT--ATTGACGTAAGACCT----------------ATCAAAA-------------------CCCG-----AACTATTTTTAG------CCTCAACAAGAGATTGGCCCA--AACACTAATTT-----CGTGTC----TTTTATTACAGATGCCAAGACCATTCTGAAGGGCGTCAGCGGACGCCTCCGGTCTGGAGAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGGACGCCTCCGGTCTGGA...2213.00302000100000
.................................................................................................................................................................................................................................................................................................................................................................................................ATGCCAAGACCATTCTGAAGGGC...........................2312.00200100010000
...................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGACCATTCTGAAGGGC...........................2111.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................CACTAATTT-----CGTGTC----TTTTATTACAG..................................................2611.00100010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGCGGACGCCTCCGGTCTG.....2211.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................CGTCAGCGGACGCCTCCGGTCTGGA...2511.00101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CCATTCTGAAGGGCGTCAGCGGAC.................2411.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................CAAGACCATTCTGAAGGGC...........................1911.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGCGGACGCCTCCGGT........1911.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................TAATTT-----CGTGTC----TTTTATTA.....................................................2011.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GACCATTCTGAAGGGCGTCA.......................2011.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGGGCGTCAGCGGAC.................1811.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CATTCTGAAGGGCGTCAGCGGAC.................2311.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCGGACGCCTCCGGTCT......2011.00110000000000
droEug1
A-ATATGTCTTTTGATTGTCACATTT--TCCAA--AG------------------------------------------------------TGCTCATCTGA-------------------------------------ATGCCAATGCAA-----C-GCCTTCTTTGACAGCG--------------CCGC------------------TTTAAGTGGCGGCTCTT--------GCGTTTAATGACGTAAGGCCA----------------ATCAAAA-------------------AGTC-----AACTATTTATAG------TCTCAA-------------------TTTTAATTT-----TGTGCC----TTTTGTTACAGATGCCAAGACAATTCTGAAGGGCGTCAGTGGACGCCTCCGGTCGGGAGAGSizeHit CountTotal NormTotal
No Reads
droBia1
G-TTATGCCTTTTGATTGTCAGTCTT--CGCAA--ATTTTGTTTACCTATCGGCT--ATAC---------------------------ACTTGCTCGTCTGA-------------------------------------TGACCAGTGCAG-----C-GTCTTATTTGATAGTTTTAGCGGAT------CGCA-----------------GCCGACTG-CCGCACTT--------G-GCTCAATGACGTACAACCA----------------ATCAAGC-------------------CGCC-----AACTATTTTTAG------TCTCAAAAAGAGATTGGCCCA--AACACTAATTT-----CGTGCC----TTTTATTACAGATGCCAAGACCATTCTGAAGGGCGTCAGTGGACGCCTCCGGTCGGGAGAGSizeHit CountTotal NormTotal
No Reads
droTak1
G-TTATGCCTTTTGATTGTCAGACTT--TGCAA--ATTTTGTTTACCTATCGGCT--CTAC---------------------------ACTTGCTCGTCCGA-------------------------------------TGACCGATGCAG-----C-GCCTTGTTTGATAGTTTG-------GTACT-----TCCAGCGGTACCTCATCGTCGAGTGGCGGCACTT--------GGGTTCAATGACGTAAGACCA----------------ATCAAAC----------C-A------AGCC-----AACTATTTTTAG------CCCCAACGAGAGATTGTTGCA--AACACTAATTT-----CGTGCC----TTTTATTACAGATGCCAAGACCATTCTGAAGGGCGTCAGTGGGCGCCTCCGGTCGGGAGAGSizeHit CountTotal NormTotal
No Reads
droEle1
G-TTATGCCTTTTGATTGTCAGACTT--TGCAA--A-TTTGTTTATCTATCGGCT--CTAC---------------------------ACTTGCTCGTCCGA-------------------------------------TGACCAATGCAACT-AGC-GTTTTATTTGTAAGTTTGTACGGAG-----CCGCA-----------------GTCGAGTGGAGGCACTT--------GGGTTCAATGATGTAAGACCA----------------ATCAAAC-------------------TGCC-----AACTATTTGTAG------TTTTAACGAGAGACTGGCCCA--AGCACTAATTT-----CTTGTC----TCTTGTTACAGATGCCAAGACCATTCTAAAGGGTGTGAGTGGACGCCTCCGGTCGGGAGAGSizeHit CountTotal NormTotal
No Reads
droRho1
G-CTATGCCGTTGGATTGAGAGACTT--TGCAA--A-TTTGTTTATCTATCGGCT--CTAC---------------------------ACTTGCTCGTCCAA-------------------------------------AGACCAATGCAGCC-ACC-GCTTTTTTTGATAGTTTCTACGGAG-----CCGCA-----------------GTGAAGTGGAGGCACTT--------GGGTTCAATGACGTAAGACAC----------------ATTAAAA-------------------CGCC-----AACTATTTTTAG------CTTTAACGAGAGATTGGCCCA--ATCACTAATTT-----CATGTC----T-TTATAACAGATGCCAAGACCATTCTGAAGGGTGTCAGTGGACGCCTCCGGTCGGGAGAGSizeHit CountTotal NormTotal
No Reads
droFic1
G-CTATGCCTTTTGATTGTCAGACTT--TTCAT--A-TTTGTTTACCTATCGGCT--CTTC---------------------------ACTGGCTCGTCTGA-------------------------------------TGACCAATGCAG-----C-G-CTTATTTGCTAGTTTATTCGGAG-----CCGCA-----------------TTCAAGTAGCAGCACTT--------GGGTTCAATGACGTAAGATCTAACTCAACCCAAACCAAACCAAA-------------------CGCC-----GACTATTTTTAG------TCTCAATGAGAGATTGGCCCA--AACACTAATTT-----CGTGGC----TTTTATTACAGATGCCAAGACCATTCTGAAGGGCGTCAGCGGACGCCTCCGGTCGGGAGAGSizeHit CountTotal NormTotal
No Reads
droKik1
GGCTCTGTTGTTCGATTGTCAAATAT--TTCGCGATTTTTGTTTACCTCTCAAGC-TCTTG-------------CCT-------CC--ACCTCC----------------------------------GCCTCCACCAATGACCCATGCAGCTGAGCCG-CTTCTTTGATAGTTTT-TCGATG-----TC---TTCAGGGG-G----T--TTCAAGTGCTGGGTACT------CTAGGCTCAATGACGTAAGC------------------------------------------------T-----TCCTATTTTTAG------TAATAACATATAAT---AACA--AGTTATATTTT-----TGTGA-----TTTTATTACAGATGCCAAGACCATTCTGAAGGGCGTCAGTGGACGCCTGCGGTCGGGAGAGSizeHit CountTotal NormTotal
No Reads
droAna3
G-TTATGCCTTTTGATTGTCAGAGTT--TGC-G--ATTTTGTTTACCTATCGACT--CTCCACCTATGCACCCACTTCCACC------TCTCC-TTCTACCTCCACTACCACCTCCACTTCCACCTCCACTTCCATC-----------------TCC-ACTTCCACCGATAGTTTG-------G----------------G-C----T--TTCGAGTGGCCCCTCTT--------GGGTTCAACGACGCGGCGTCA---------------------GAAGGCCCATCGAAGAGCCAACGCATATCATACTATTTTTAG------TT------------------------ATTAATTT-----GGCGTCTTCGTCTCGTTACAGATGCGAAAACCATTCTGAAGGGCGTCAGCGGACGCCTCCGCTCCGGAGAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................GAAAACCATTCTGAAGGGCGTCAGC.....................2514.004020020
.........................................................................................................................................................................................................................................................................................................................................................................................................ACCATTCTGAAGGGCGTCAGCGGACGCC..............2811.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................CGTCAGCGGACGCCTCCGCTCC......2211.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGCGGACGCCTCCGCTCCGGAG..2511.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................GAAAACCATTCTGAAGGGCGT.........................2111.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................TCTGAAGGGCGTCAGCGGAC.................2011.001000010
........................................................................................................................................C-----------------TCC-ACTTCCACCGATAGTTTG-------G----------------G-C----T--T................................................................................................................................................................................................................................2711.001100000
droBip1
G-TTATGCCTTTTGATTGTCAGAGTT--TGC-G--ATTTTGTTTACCTATCGACT--CTCCACCTATGCACCCACTT-------------------------------CCACCTC------------CACTTCCACC-----------------TCC-ACGTCCCCCGATAGTTTC-------G----------------G-C----T--CTTGAGTGGCCCCTCTT--------GGGTTCAACGACGTCAGAAGC----------------CCCATCA----------CAG-GCCAGCGGA-----GACTATTTTTAG------TT------------------------ATTAATTT-----GGTGCT-TCGTTTCGTTACAGATGCCAAAACCATTCTGAAGGGCGTCAGCGGCCGCCTCCGCTCCGGAGAASizeHit CountTotal NormTotal
No Reads
dp5
G-TTATGCTGTTTGATTGCCAGTCTTTTTTTTT--ATTTTTTTTACCTATTGACT--TCA----------------------CTTCACACTTGATCGTCCGA-------------------------------------TGAC--ATTTAA-----T-AGCT-TCGC----------------------CATA-----------------GTTAAGTGGCGGCGCTT--------G-GTTCAATAACGTTAGATTA----------------ATCATGA-------------------AGGC-----GACTATTTTTAG------GCCTGATAAAAGATTTCCCCAAAAACACTAATTT-----CATACA-TCTTGTCATTTCAGATGCCAAAACAATTCTGAAGGGCGTCAGCGGGCGCCTGCGGTCAGGAGAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................................................................................................................................................................................................ACAATTCTGAAGGGCGTCAGCGG...................2312.0020200000000
............................................................................................................................................................................................................................................................................................................................................................................................................ATTCTGAAGGGCGTCAGCGGGCGC...............2411.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CAATTCTGAAGGGCGTCAGCGGGCGC...............2611.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGCGGGCGCCTGCGGTCAGG....2311.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................CAAAACAATTCTGAAGGGCGT.........................2111.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................AAAACAATTCTGAAGGGC...........................1811.0010010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................CAAAACAATTCTGAAGGGC...........................1911.0010100000000
..........................................................................................................................................................................................................................................................AGATTA----------------ATCATGA-------------------AGGC-----GACT............................................................................................................................2111.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................AACAATTCTGAAGGGCGT.........................1811.0010000100000
....................................................................................................................................................................................................................TAAGTGGCGGCGCTT--------G-GTTCA.................................................................................................................................................................................................2111.0010000001000
........................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGCGGGCGCCTGCGGTCAGGAG..2511.0010100000000
droPer2
G-TTATGCTGTTTGATTGCCAGTCTTT-TTTTT--ATTTTTTTTACCTATTGACT--TCA----------------------CTTCACACTTGATCGTCCGA-------------------------------------TGAC--ATTTAA-----T-AGCT-TCGC----------------------CATA-----------------GTTAAGTGGCGGCGCTT--------GGGTTCAATAACCGTAGATTA----------------ATCATGA-------------------AGGC-----GACTATTTTTAG------GCCTGATAAAAGATTTCCCCAAAAACACTAATTT-----CATACA-TCTTGTCATTTCAGATGCCAAAACAATTCTGAAGGGCGTCAGCGGGCGCCTGCGGTCAGGAGAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................CAAAACAATTCTGAAGGGC...........................1917.007700000
.......................................................................................................................................................................................................................................................................................................................ATTTTTAG------GCCTGATAAAAG..................................................................................................2012.002200000
...........................................................................................................................................................................................................................................................................................................................................................................................................AATTCTGAAGGGCGTCAGCGGGC.................2312.002200000
.................................................................................................................................................................................................................................................................................................................................................................................................ATGCCAAAACAATTCTGAAGGGC...........................2311.001001000
........................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGCGGGCGCCTGCGGTCAGGAGA.2611.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................AATTCTGAAGGGCGTCAGCGGGCGC...............2511.001000001
...................................................................................................................................................................................................................................................................................................................................................................................................GCCAAAACAATTCTGAAG..............................1811.001001000
droWil2
G-GCATGTTGTTTTGTTTGTTTACTT--TATTG--ACTTT-TTGATTTAACTGTCT-TGGT---------------------------TTTGGATCGTCCAATGACCACCACCAA------------CACTTCCAGC--ACTCCAATGCAG-----C-ACTTCCCTCTATTGTCTG-------T------------------C----TATGACGAGTGTTAGCACTT--------TAGTT--------------------------------------------------------------------------TTTATTTTTAAAC---AAAAGTAATTGA--------------TTTGCTTCTTTTTT----TTTGTTTACAGATGCCAAGACCATTTTAAAGGGAGTCAGCGGTCGCCTGAGATCGGGCGAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................AGTCAGCGGTCGCCTGAGATCGGGC...2512.00200200
..........................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGGTCGCCTGAGATCGGGC...2212.00200200
.......................................................................................................................................................................................................................................................................................................................................................................................................................AGTCAGCGGTCGCCTGAGATCGGG....2412.00200110
............................................................T---------------------------TTTGGATCGTCCAATGACCACC.....................................................................................................................................................................................................................................................................................................................................2311.00110000
....................................................................................................................................................................................................................................................................................................................................................................................................CCAAGACCATTTTAAAGGGAGT.........................2211.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGTCGCCTGAGATCGGG....2011.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGTCGCCTGAGATCGGGC...2111.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................AGACCATTTTAAAGGGAG..........................1811.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................GACCATTTTAAAGGGAGTC........................1911.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................TTTAAAGGGAGTCAGCGGT..................1911.00101000
......................................................................................................................................................................................................................................................................................................................................................................................................................GAGTCAGCGGTCGCCTGAGATCGGGCG..2711.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGCGGTCGCCTGAGATCGGG....2311.00101000
droVir3
A-AT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACTTA--ATTCC-CA-TT-----TGATTT----TTTTTTTCCAGAAAACAAAGACATACTGAAAGGACTCTCGGGCTACTTTCGTTCCGGCGAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................GGACTCTCGGGCTACTTTCGTTCCGGC...2711.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................AACAAAGACATACTGAAAG.............................1911.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................TCGGGCTACTTTCGTTCC......1811.001100000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................AGACATACTGAAAGGACTC........................1911.001010000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTCGGGCTACTTTCGTTCCGGC...2511.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................CGGGCTACTTTCGTTCCGGCGT.2211.001000000000000000000000010000000000000000000000000000000000000000
droMoj3
C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCTTTCTAGCTGCCAAAACCATTTTGAAGGGTGTCAGCGGGCGCTTGCGGTCAGGAGAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
T-TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTACAGATGCCAAAACTATTCTCAAAGGAGTCAGCGGGCGCTTGCGTTCTGGAGAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................................CTATTCTCAAAGGAGTCAGCGGGCGCT..............2711.00101
............................................................................................................................................................................................................................................................................................................................................................................................................ATTCTCAAAGGAGTCAGCGGGCGCT..............2511.00101
..................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAGTCAGCGGGCGCT..............1911.00101
................................................................................................................................................................................................................................................................................................................................................................................................................TCAAAGGAGTCAGCGGGCGCTTGCG..........2511.00110
..................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAGTCAGCGGGCGCTTGCGTTCT......2711.00110

Generated: 05/18/2015 at 05:56 PM