dsi_6170

exon [2r_5898979_5900218_+]; CDS [2r_5898979_5899667_+]; exon [2r_5898644_5898905_+]; CDS [2r_5898644_5898905_+]; intron [2r_5898906_5898978_+]

##################################################-------------------------------------------------------------------------################################################## GACCTTCGAGGACGCCGCCGATAGCCGGGAGGCCAGTCTGGAGTCACATGGTGGGTCAACATTAACGTACTACAAAGGCGTCAATAAAACACACTAACTTAACAATGATTTAACCCCATTTAGACGCCGCCATCGCCGCTATCAGCAAGCAGTTCGAGTGCAAGGTGGCTTAT ************************************************(((((.....((((((((.((....))))))........................)))).....)))))....************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	GSM343915 embryo	M053 female body	M025 embryo	SRR618934 dsim w501 ovaries	M024 male body	SRR553485 Chicharo_3 day-old ovaries	SRR553487 NRT_0-2 hours eggs
................................................................................................................................................GCAAGCAGTTCGAGTGCAAGGTG......	23	0	1	2.00	2	0	2	0	0	0	0	0
...CTTCGAGGACGCCGCCGATAGCCGGGA...............................................................................................................................................	27	0	1	2.00	2	1	0	0	0	1	0	0
......................................................................................................................................................AGTTCGAGTGCAAGGTGGC....	19	0	1	2.00	2	1	1	0	0	0	0	0
...............CGCCGATAGCCGGGAGGCCAGTCTG.....................................................................................................................................	25	0	1	2.00	2	0	0	2	0	0	0	0
..................................................................................................................................................AAGCAGTTCGAGTGCAAGGTG......	21	0	1	2.00	2	1	1	0	0	0	0	0
...............................................................................................................................................AGCAAGCAGTTCGAGTGCAAGGTG......	24	0	1	2.00	2	1	1	0	0	0	0	0
......................AGCCGTGAGGCCAGTCTGGAGTC................................................................................................................................	23	1	1	2.00	2	0	0	2	0	0	0	0
...............................................................................................................................................AGCAAGCAGTTCGAGTGCAAGGTGG.....	25	0	1	1.00	1	1	0	0	0	0	0	0
..............................................................................................................................................CAGCAAGCAGTTCGAGTGCAAGGT.......	24	0	1	1.00	1	0	1	0	0	0	0	0
.......................................................................................................................................................GTTCGAGTGCAAGGTGGCTT..	20	0	1	1.00	1	0	1	0	0	0	0	0
....................ATAGCCGTGAGGCCAGTCTGGAGTCA...............................................................................................................................	26	1	1	1.00	1	0	0	1	0	0	0	0
................................................................................................................................................GCAAGCAGTTCGAGTGCAAGG........	21	0	1	1.00	1	1	0	0	0	0	0	0
...............CGCCGATAGCCGGGAGGCCAGTCTGG....................................................................................................................................	26	0	1	1.00	1	0	1	0	0	0	0	0
..................CGATAGCCGGGAGGCCAGTCTGGAGT.................................................................................................................................	26	0	1	1.00	1	0	1	0	0	0	0	0
.....................................................................................................................................................CAGTTCGAGTGCAAGGTG......	18	0	1	1.00	1	0	1	0	0	0	0	0
...................................................................................................................................................AGCAGTTCGAGTGCAAGGGGGC....	22	1	1	1.00	1	1	0	0	0	0	0	0
..........GACGCCGCCGATAGCCGGGA...............................................................................................................................................	20	0	1	1.00	1	1	0	0	0	0	0	0
....................................................................................................................................TCGCCGCTATCAGCAAGCA......................	19	0	1	1.00	1	0	1	0	0	0	0	0
............CGCCGCCGATAGCCGGGAGGCCAGTCT......................................................................................................................................	27	0	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................................................................AGCAAGCCGTTCGAGTGCAAGGTG......	24	1	1	1.00	1	1	0	0	0	0	0	0
.........................................................................................................................................GCTATCAGCAAGCAGTTCGA................	20	0	1	1.00	1	0	1	0	0	0	0	0
....................................................................................................................................................GCAGTTCGAGTGCAAGGTGGC....	21	0	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................................................................AGCAAGAACTTCGATTGCAAGGTG......	24	3	1	1.00	1	1	0	0	0	0	0	0
......................AGCCGGGAGGCCAGTCTGGAGT.................................................................................................................................	22	0	1	1.00	1	1	0	0	0	0	0	0
...................................................................................................................................................AGCAGTTCGAGTGCAAGGTGGCT...	23	0	1	1.00	1	1	0	0	0	0	0	0
......................AGCCGGGAGGCCAGTCTGGAGTCACATGA..........................................................................................................................	29	1	1	1.00	1	0	1	0	0	0	0	0
.......GAGGACGCCGCCGATAGCC...................................................................................................................................................	19	0	1	1.00	1	1	0	0	0	0	0	0
...............................GCCAGTCTGGAGTCACATGACGC.......................................................................................................................	23	3	1	1.00	1	1	0	0	0	0	0	0
.......GAGGACGCCGCCGATAGCCGGGAGGCC...........................................................................................................................................	27	0	1	1.00	1	0	1	0	0	0	0	0
...........ACGCCGCCGATAGCCGGGA...............................................................................................................................................	19	0	1	1.00	1	1	0	0	0	0	0	0
..............................................................................................................................................CAGCAAGCAGTTCGAGTGCAAGGTG......	25	0	1	1.00	1	0	0	0	1	0	0	0
...........................................................................................................................................TATCAGCAAGCAGTTCGAGT..............	20	0	1	1.00	1	0	1	0	0	0	0	0
...............................................................................................................................................AGCAAGCAGTTCGAGTGCCAGGTG......	24	1	1	1.00	1	1	0	0	0	0	0	0
..................................................................................................................................CATCGCCGCTATCAGC...........................	16	0	1	1.00	1	0	0	0	0	0	1	0
......................................................................................................................................GCCGCTATCAGCAAGCAGTTCGA................	23	0	1	1.00	1	0	1	0	0	0	0	0
......................AGCCGGGAGGCCAGTCTGGAGTCACATG...........................................................................................................................	28	0	1	1.00	1	0	0	1	0	0	0	0
................GCCGATAGCCGGGAGGCC...........................................................................................................................................	18	0	1	1.00	1	0	0	0	1	0	0	0
...............................................................................................................................................AGCAAGCAGTTTGAGAGCAAGGTG......	24	2	1	1.00	1	1	0	0	0	0	0	0
......................................................................................................................................................AGTTCGAGTGCAAGGTGG.....	18	0	1	1.00	1	1	0	0	0	0	0	0
.................................CAGTCTGGAGTCACATGAC.........................................................................................................................	19	2	3	0.33	1	0	0	1	0	0	0	0
...CTTCGAGGACCCTGCCGAGA......................................................................................................................................................	20	3	9	0.22	2	0	0	0	0	0	0	2
............................................................................................................................CTCCGCCATCGCCGCT.................................	16	1	14	0.14	2	0	0	0	2	0	0	0
.........................................................................................................................AGACGGCGCGATCGTCGCT.................................	19	3	13	0.08	1	0	0	0	0	1	0	0
.............................................................................................................................TCCGCCATCGCCGCTTTC..............................	18	2	19	0.05	1	0	0	0	1	0	0	0
.........................................................AACATTAACGTAATA.....................................................................................................	15	1	20	0.05	1	0	0	0	0	0	1	0

CTGGAAGCTCCTGCGGCGGCTATCGGCCCTCCGGTCAGACCTCAGTGTACCACCCAGTTGTAATTGCATGATGTTTCCGCAGTTATTTTGTGTGATTGAATTGTTACTAAATTGGGGTAAATCTGCGGCGGTAGCGGCGATAGTCGTTCGTCAAGCTCACGTTCCACCGAATA ************************************************(((((.....((((((((.((....))))))........................)))).....)))))....************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553487 NRT_0-2 hours eggs	SRR618934 dsim w501 ovaries	SRR553488 RT_0-2 hours eggs	SRR553485 Chicharo_3 day-old ovaries
............GCGCCGGCTATCGGCC.................................................................................................................................................	16	1	1	2.00	2	2	0	0	0
........................................................................................................................ATCCGAGGCGGTAGCGGCGAA................................	21	3	3	0.33	1	0	1	0	0
........................................................................................................................ACCCGCGGCGGTAGCGGCGAA................................	21	3	4	0.25	1	0	1	0	0
........................................................................................................................ATCAGAGGCGGTAGCGGCGAA................................	21	3	7	0.14	1	0	1	0	0
....................................................................TCATGTTTCCGGAGTGATTT.....................................................................................	20	3	8	0.13	1	0	0	0	1
...........................................................................................................................TGAGGCGGTAGCGGCGAA................................	18	2	10	0.10	1	0	1	0	0
...............................................................................................................................................TGGTACGCCAAGCTCACGTT..........	20	3	13	0.08	1	0	0	1	0
............................................................................................................................GAGGCGGTAGCGGCGA.................................	16	1	14	0.07	1	0	1	0	0
.....................................................................GAGGTTTCTGCAGTTCTTTT....................................................................................	20	3	17	0.06	1	0	0	1	0
..............................................................ATTGCATGATGCGTC................................................................................................	15	2	20	0.05	1	0	1	0	0

Species	Coordinate	ID	Alignment
droSim2	2r:5898856-5899028 +	dsi_6170	GACCTTCGAGGACGCCGC---------CGATAGCCGGGAGGCCAGTCTGGAGTCACATGGTGGGTCAACA--TTAACGTACTACA----------AAG---GCGTCAATAAAACACACT-----------AACT----TAACAATGATT--TAA-----------CCCCATTTAGACGCCGCCATCGCCGCTATCAGCAAGCAGTT---CGAGTGCAAGGTGGCTTAT
droSec2	scaffold_1:2728156-2728328 +		GACCTTCGAGGACGCCGC---------CGATAGCCGGGAGGCCAGTCTGGAGTCACATGGTGGGTCAACA--TTAACGTACTACA----------AAG---GCGTCAATAAGAAACACT-----------AATT----TAACAATGATT--TAA-----------CCCCATTTAGACGCCGCCATCGCCGCTATCAGCAAGCAGTT---CGAGTGCAAGGTGGCTTAT
dm3	chr2R:5095800-5095971 +		GACCTTCGAGGACGCCGC---------CGAGAGCCGGGAGGCCAGTCTGGAGTCACATGGTGGGTCAACA--ATAACGTACTACA----------AAG---GCGTCAATAAGACACACT-----------AATT----TAACAATGATT--TAA------------CACATTTAGACGCCGCCATAGCTGCTATCAGCAAGCAGTT---CGAGTGCAAGGTGGCTTAT
droEre2	scaffold_4929:17560932-17561093 -		GACCTTCGAGGATGCCGC---------CAAGAGCCGGGAGGACAGTCTAGAGTCACATGGTGGGTCAACA--TT----------A----------AAG---TACTCAATAAGACACACT-----------AATT----TAACCATGCTT--AAA------------CCCCCTTAGACGCCGCCATTGCCGCTATCAGCAAGCAGTT---CGAGTGCAAGGTGGCTTAT
droYak3	2L:17750647-17750819 +		GACCTTCGAAGACGCCGC---------CACAAGCCGCGAGGCCAGTCTGGAGTCACATGGTGGGTCAACA--TTAAATTACTACA----------AAA---GCGTCAATAAGACACACT-----------AACT----TAACCATAATT--GAA-----------CCCATTTCAGACGCCGCCATTGCCGCTATCAGCAAGCAGTT---CGAGTGCAAGGTGGCTTAT
droEug1	scf7180000409183:736153-736316 +		GAGCTTTGAGGATTCTGC---------AGAGAGCCGAGAGTCCAGCCTGGAGTCACATGGTGGGTAATACCA------------A----------AAA---CAGCAAATTTGACACACT-----------TAAG----TTACTATGTTT--AAA------A----TAATTTTCAGATGCCGCCATTGCCGCTATCAGCAAGCAGTT---CGATTGCAAGGTGGCTTAT
droBia1	scf7180000301506:1633996-1634156 -		GAGCTTCGAGGACGCCAC---------CGAGAGCCGCGAGTCCAGCCTGGAGTCACATGGTGGGTGATCA--TCAGC-----AGA----------AAG---CAGTCAATGTGACACACT-----------TAAT----TTACAA---------A-----------CCACTTTCAGACGCCGCCATCGCCGCTATCAGCAAGCAGTT---CGATTGCAAGGTGGCATAT
droTak1	scf7180000415274:41200-41370 +		GAGCTTCGAGGACGCCGC---------CGAGACCCGGGAGGCCAGCCTGGAGTCACATGGTGGGTCATCA-------------CA----------GAG---CGGCCAATGTGACACACT-----------TACT----TTACCATGTTTCACCTTAAAA-A---TCCCCCCTCAGACGCCGCCATCGCCGCTATCAGCAAGCAGTT---CGAGTGCAAGGTGGCTTAT
droEle1	scf7180000491201:915414-915584 +		GAGCTTCGAGGATGCCGT---------CGAGAGCAGGGAGGATGTTTTGGAGGCACATGGTGGGTCATGCGG----C-----AAACAGC------AAA---CAGGCAATGTGACACACT-----------TATT----TAACTATGCTA--TTA----------TCCACATTCAGACGCCGCCATCGCCGCTATCAGCAAGCAGTT---CGAGTGCAAGGTGGCTTAT
droRho1	scf7180000775249:15830-15992 +		GAGCTTCGAAGACGCCGC---------CGCTAGCCGTGAGGACAGTCTGGAGTCACATGGTGGGTCATACAG------------A----------AAT---CATACAATGTGACACACT-----------TATT----TTACTATACAA--TAT-----------CCACCTTCAGACGCCGCCATCGCCGCTATCAGCAAACAGTT---CGAGTGCAAGGTGGCTTAT
droFic1	scf7180000453851:1184936-1185099 -		GACCTTCGAGGACGCTGC---------TGAGAGCCGCCAGGCCAGCCTGGAGTCACATGGTGGGTGAACAC-----------ACA----------AAG---CAACTAATATCACACACT-----------TACT----TGACCATGTTT--ACA-----------CCACATTTAGACGCCGCCATTGCCGCTATCAGCAAGCAGTT---CGATTGCAAGGTGGCTTAT
droKik1	scf7180000302476:475478-475644 +		GAGCTTCGAGGATGCGGC---------CGAGAGCCGCGAGCAGACTTTGGAGTCACATGGTGCGTTAAACA-T-----------A----------TAT--ACAAACAATGTGACCCACA-----------TGCT----ATATAGTATAT--ACT------CT--TCCTCGCGCAGACGCCGCCATCGCCGCTATCAGCAAGCAGTT---TGAGTGCAAGGTGGCTTAT
droAna3	scaffold_13266:8478875-8479039 -	dan_1882	CAGCTTCGAGGATTCGAA---------GGAGAGTCGCGAGGCCACCCTGGAGTCACATGGTTAGTAAGCCAA-------------CAAACT-------------TCCAGGTGATCACCT-----------CACC----TCAATCTTCCA--CTTCC----A----ACTCCCGCAGACGCTGCCATCGCCGCTATCAGCAAGCAGTT---TGAGTGCAAGGTTGCTTAT
droBip1	scf7180000396759:327230-327394 +		CAGCTTCGAGGATTCGAA---------GGAGAGTCGCGAGGCCACCCTGGAGTCACATGGTTAGTAAGCAAA-------------CAATCT-------------TCCAGGTGATCACCT-----------CACC----TCAATCTTCCA--TTTCG----A----ACTCCCGTAGACGCTGCCATCGCCGCTATCAGCAAGCAGTT---TGAGTGCAAGGTGGCTTAT
dp5	3:9161853-9162014 +		CAGCTTCGAGGATGACGA---------AGATACCCGCGAGGCTGTCCTGGAGTCACATGGTTTGTACACAGA-------------TCAGTTTGCGAGTGA--------GAATGGGTGCT-----------AATT----TCGTTGTGCT------------------CTTCGACAGACTCTGCCATTGCCGCTATCAGCAAGCAGTT---TGAGTGCAAGGTAGCTTAT
droPer2	scaffold_4:4485560-4485721 +		CAGCTTCGAGGATGACGA---------AGATACCCGCGAGGCTGTCCTGGAGTCACATGGTTTGTACACAGA-------------TCAGTTTGCGAGTGA--------GAATGGGTGCT-----------AATT----TCATTGTGCT------------------CTTCGACAGACTCTGCCATTGCCGCTATCAGCAAGCAGTT---TGAGTGCAAGGTAGCTTAT
droWil2	scf2_1100000004822:1863884-1864047 -		AACCTTTGATGATGCCGATGCTGATGTGGAGACACGTGAAGCTAAATTGGAGTCACATGGTAAGTGTA------------TTACA----------AAG---GC-------AAATGCATTTCTTCAGTACTAA---------------CT--GA------------TTCATTGCAGACGCTGCTATTGCTGCCATCACCAAGCAATT---GGAGTGCAAAGTGGCTTAT
droVir3	scaffold_12875:14365146-14365314 +		TTCCTTTGAGGATGTGTC---------CGAGACACGTGCTGCTACGCTCCAGTCACATGGTACGCCCTGACA-------------GCCACTAACTCATGC------------ATATATG----TAG-GCTAATT--------GATA-TT--TAC-----CT----TATTGAACAGACTCCGCGATTGCCGCTATCAGCAAGCAATTGAACGGCTGCAAGGTGGCTTAT
droMoj3	scaffold_6496:9826259-9826428 +		TTCCTTTGAGAATGTGGA---------AGAGACACGTGCCGCAACGCTCCAGTCACATGGTGAGCTTCA----------------------------------CTCAATGAGAGTTGTC-----------CATTCAATTGATTAATTCTTATCGTGAAT-ATTACCTGTAAACAGACGCTGCCATTGCTGCCATCAGTCAGCAATT---GAAGTGCAAGGTTGCCTAT
droGri2	scaffold_15245:14348735-14348815 +		TAATTT-------------------------------------------------------------------------------------------------------------------------------------GATAAAAATG--TAT-----CT----TTTATAATAGATTCGGCTATTGCTGCTGTTAGCAAGCAGTT---GGACTGCAAGGTGGCTTAT

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

GACCTTCGAGGACGCCGC---------CGATAGCCGGGAGGCCAGTCTGGAGTCACATGGTGGGTCAACA--TTAACGTACTACA----------AAG---GCGTCAATAAAACACACT-----------AACT----TAACAATGATT--TAA-----------CCCCATTTAGACGCCGCCATCGCCGCTATCAGCAAGCAGTT---CGAGTGCAAGGTGGCTTAT	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
....................................................................................................................................................................................................GCAAGCAGTT---CGAGTGCAAGGTG......	23	1	2.00	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0
...CTTCGAGGACGCCGC---------CGATAGCCGGGA.............................................................................................................................................................................................	27	1	2.00	2	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
..........................................................................................................................................................................................................AGTT---CGAGTGCAAGGTGGC....	19	1	2.00	2	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0
...............CGC---------CGATAGCCGGGAGGCCAGTCTG...................................................................................................................................................................................	25	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................AAGCAGTT---CGAGTGCAAGGTG......	21	1	2.00	2	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0
...................................................................................................................................................................................................AGCAAGCAGTT---CGAGTGCAAGGTG......	24	1	2.00	2	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0
...................................................................................................................................................................................................AGCAAGCAGTT---CGAGTGCAAGGTGG.....	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
..................................................................................................................................................................................................CAGCAAGCAGTT---CGAGTGCAAGGT.......	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................GTT---CGAGTGCAAGGTGGCTT..	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................GCAAGCAGTT---CGAGTGCAAGG........	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
...............CGC---------CGATAGCCGGGAGGCCAGTCTGG..................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................CGATAGCCGGGAGGCCAGTCTGGAGT...............................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................CAGTT---CGAGTGCAAGGTG......	18	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..........GACGCCGC---------CGATAGCCGGGA.............................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
........................................................................................................................................................................................TCGCCGCTATCAGCAAGCA.........................	19	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
............CGCCGC---------CGATAGCCGGGAGGCCAGTCT....................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.............................................................................................................................................................................................GCTATCAGCAAGCAGTT---CGA................	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................GCAGTT---CGAGTGCAAGGTGGC....	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
...............................AGCCGGGAGGCCAGTCTGGAGT...............................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.......................................................................................................................................................................................................AGCAGTT---CGAGTGCAAGGTGGCT...	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
...............................AGCCGGGAGGCCAGTCTGGAGTCACATGA........................................................................................................................................................................	29	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.......GAGGACGCCGC---------CGATAGCC.................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.......GAGGACGCCGC---------CGATAGCCGGGAGGCC.........................................................................................................................................................................................	27	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...........ACGCCGC---------CGATAGCCGGGA.............................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
..................................................................................................................................................................................................CAGCAAGCAGTT---CGAGTGCAAGGTG......	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...............................................................................................................................................................................................TATCAGCAAGCAGTT---CGAGT..............	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................CATCGCCGCTATCAGC..............................	16	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................GCCGCTATCAGCAAGCAGTT---CGA................	23	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................AGCCGGGAGGCCAGTCTGGAGTCACATG.........................................................................................................................................................................	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................GC---------CGATAGCCGGGAGGCC.........................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..........................................................................................................................................................................................................AGTT---CGAGTGCAAGGTGG.....	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
..........................................CAGTCTGGAGTCACATGAC.......................................................................................................................................................................	19	3	0.33	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

GACCTTCGAGGACGCCGC---------CGATAGCCGGGAGGCCAGTCTGGAGTCACATGGTGGGTCAACA--TTAACGTACTACA----------AAG---GCGTCAATAAGAAACACT-----------AATT----TAACAATGATT--TAA-----------CCCCATTTAGACGCCGCCATCGCCGCTATCAGCAAGCAGTT---CGAGTGCAAGGTGGCTTAT	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
...................................................................................................................................................................................................AGCAAGCAGTT---CGAGTGCAAGGTG......	24	1	10.00	10	0	2	7	1
..........................................................................................................................................................................................................AGTT---CGAGTGCAAGGTGGC....	19	1	7.00	7	0	2	5	0
...................................................................................................................................................................................................AGCAAGCAGTT---CGAGTGCAAGGTGGC....	26	1	7.00	7	0	1	6	0
...........................................................................................................................................................................................................GTT---CGAGTGCAAGGTGGC....	18	1	6.00	6	0	0	6	0
..........................................................................................................................................................................................................AGTT---CGAGTGCAAGGTGG.....	18	1	6.00	6	1	0	5	0
................................................................................................................................................................................................ATCAGCAAGCAGTT---CGAGTGCAAGGTG......	27	1	5.00	5	0	3	2	0
.......GAGGACGCCGC---------CGATAGCCGGGA.............................................................................................................................................................................................	23	1	4.00	4	0	0	4	0
......................................................................................................................................................................................................AAGCAGTT---CGAGTGCAAGGTGGC....	23	1	4.00	4	0	1	3	0
....................................................................................................................................................................................................GCAAGCAGTT---CGAGTGCAAGGTGGC....	25	1	3.00	3	0	0	3	0
......................................................................................................................................................................................................AAGCAGTT---CGAGTGCAAGGTGG.....	22	1	3.00	3	0	0	3	0
........................................................................................................................................................................................................GCAGTT---CGAGTGCAAGGTGGC....	21	1	3.00	3	0	1	2	0
....................................................................................................................................................................................................GCAAGCAGTT---CGAGTGCAAGGT.......	22	1	3.00	3	0	0	2	1
...................................................................................................................................................................................................AGCAAGCAGTT---CGAGTGCAAGGTGG.....	25	1	3.00	3	0	0	3	0
GACCTTCGAGGACGCCGC---------CG.......................................................................................................................................................................................................	20	1	3.00	3	0	0	3	0
..........GACGCCGC---------CGATAGCCGGGAGGCCAGT......................................................................................................................................................................................	27	1	2.00	2	0	0	2	0
..................................................................................................................................................................................................CAGCAAGCAGTT---CGAGTGCAAGGTG......	25	1	2.00	2	0	0	2	0
.....................................................................................................................................................................................................CAAGCAGTT---CGAGTGCAAGGTGGCTT..	26	1	2.00	2	1	0	1	0
............................GATAGCCGGGAGGCCAGTCTGGAGT...............................................................................................................................................................................	25	1	2.00	2	0	1	1	0
................................................................................................................................................................................................ATCAGCAAGCAGTT---CGAGTG.............	20	1	2.00	2	0	0	1	1
..................................................................................................................................................................................................CAGCAAGCAGTT---CGAGTGCAAGGTGG.....	26	1	2.00	2	0	1	1	0
....................................................................................................................................................................................................GCAAGCAGTT---CGAGTGCAAGGTGG.....	24	1	2.00	2	0	0	2	0
..............................TAGCCGGGAGGCCAGTCTGGA.................................................................................................................................................................................	21	1	2.00	2	0	1	1	0
..................................................................................................................................................................................................CAGCAAGCAGTT---CGAGTGCAAGGTGGC....	27	1	2.00	2	0	2	0	0
......................................................................................................................................................................................CATCGCCGCTATCAGCAAGC..........................	20	1	2.00	2	0	0	2	0
.........GGACGCCGC---------CGATAGCCGGGAGGCCAGT......................................................................................................................................................................................	28	1	2.00	2	0	1	1	0
GACCTTCGAGGACGCCGC---------C........................................................................................................................................................................................................	19	1	2.00	2	0	0	2	0
.............................ATAGCCGGGAGGCCAGTCTGGA.................................................................................................................................................................................	22	1	2.00	2	0	1	1	0
......................................................................................................................................................................................................AAGCAGTT---CGAGTGCAAGGT.......	20	1	2.00	2	0	0	1	1
........................................................................................................................................................................................................GCAGTT---CGAGTGCAAGGTGG.....	20	1	2.00	2	0	1	1	0
..........GACGCCGC---------CGATAGCCGGGA.............................................................................................................................................................................................	20	1	1.00	1	0	0	1	0
..................................................................................................................................................................................................CAGCAAGCAGTT---CGAGTG.............	18	1	1.00	1	0	0	1	0
...............................................................................................................................................................................................TATCAGCAAGCAGTT---CGAGTGC............	22	1	1.00	1	0	0	1	0
.......GAGGACGCCGC---------CGATAGCC.................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0
...........................................................................................................................................................................................................GTT---CGAGTGCAAGGTGGCT...	19	1	1.00	1	0	0	1	0
...........................CGATAGCCGGGAGGCCAGTCTGGAGT...............................................................................................................................................................................	26	1	1.00	1	0	0	1	0
.......................................GGCCAGTCTGGAGTCACATGA........................................................................................................................................................................	21	1	1.00	1	0	0	1	0
.......GAGGACGCCGC---------CGATAGCCGGGAGGC..........................................................................................................................................................................................	26	1	1.00	1	0	1	0	0
.................C---------CGATAGCCGGGAGGCCAGTCTGGA.................................................................................................................................................................................	25	1	1.00	1	0	0	1	0
......................................................................................................................................................................................................AAGCAGTT---CGAGTGCAAGGTG......	21	1	1.00	1	0	0	1	0
........................................................................................................................................................................................................GCAGTT---CGAGTGCAAGGTG......	19	1	1.00	1	0	0	1	0
..................................................................................................................................................................................................CAGCAAGCAGTT---CGAGTGCAAGGT.......	24	1	1.00	1	0	0	1	0
GACCTTCGAGGACGCCGC---------.........................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0
.......GAGGACGCCGC---------CGATAGCCGGGAGGCC.........................................................................................................................................................................................	27	1	1.00	1	0	0	1	0
.......................................................................................................................................................................................................AGCAGTT---CGAGTGCAAGGTGG.....	21	1	1.00	1	0	0	1	0
...............................................................................................................................................................................................TATCAGCAAGCAGTT---CGAGTGCAAG.........	25	1	1.00	1	0	0	1	0
GACCTTCGAGGACGCCGC---------CGATAGC..................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0
..........................................CAGTCTGGAGTCACATGA........................................................................................................................................................................	18	1	1.00	1	0	0	1	0
.........GGACGCCGC---------CGATAGCCGGGAGGCC.........................................................................................................................................................................................	25	1	1.00	1	0	0	1	0
................................................................................................................................................................................................ATCAGCAAGCAGTT---CGAGTGCAAG.........	24	1	1.00	1	0	0	1	0
..CCTTCGAGGACGCCGC---------CGAT.....................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0
.....................................................................................................................................................................................................CAAGCAGTT---CGAGTGCAAGGTGG.....	23	1	1.00	1	0	0	1	0
...............................................................................................................................................................................................TATCAGCAAGCAGTT---CGAGT..............	20	1	1.00	1	0	0	1	0
.............................................................................................................................................................................................GCTATCAGCAAGCAGTT---CGAGTGCAAGGT.......	29	1	1.00	1	0	1	0	0
...CTTCGAGGACGCCGC---------CGATAGCCGGGA.............................................................................................................................................................................................	27	1	1.00	1	0	0	1	0
.......................................................................................................................................................................................ATCGCCGCTATCAGCAAGCAGTT---CGA................	26	1	1.00	1	0	0	1	0
........................................................................................................................................................................................................GCAGTT---CGAGTGCAAGGT.......	18	1	1.00	1	0	0	1	0
...CTTCGAGGACGCCGC---------CGAT.....................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0
................GC---------CGATAGCCGGGAGGCCAGTCTGGA.................................................................................................................................................................................	26	1	1.00	1	0	0	1	0
.........................................................................................................................................................................................CGCCGCTATCAGCAAGCAGTT---CGAGTG.............	27	1	1.00	1	1	0	0	0
........................................................................................................................................................................................................GCAGTT---CGAGTGCAAGGTGGCTTA.	24	1	1.00	1	1	0	0	0
....................................................................................................................................................................................................GCAAGCAGTT---CGAGTGCAAGGTGGCT...	26	1	1.00	1	0	0	1	0
.........GGACGCCGC---------CGATAGCCGGGAGGC..........................................................................................................................................................................................	24	1	1.00	1	0	0	1	0
.................................................................................................................................................................................GCCGCCATCGCCGCTATC.................................	18	1	1.00	1	0	0	1	0
.............GCCGC---------CGATAGCCGGGAGGC..........................................................................................................................................................................................	20	1	1.00	1	0	0	0	1
.......................................................................................................................................................................................................AGCAGTT---CGAGTGCAAGGT.......	19	1	1.00	1	0	0	1	0
.............................................................................GTACTACA----------AAG---GCGTCAATAAGAA..................................................................................................................	24	1	1.00	1	0	0	1	0
.......GAGGACGCCGC---------CGATAGCCGGGAGGCCA........................................................................................................................................................................................	28	1	1.00	1	0	0	1	0
.ACCTTCGAGGACGCCGC---------CG.......................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0
................................................................................................................................................................................................ATCAGCAAGCAGTT---CGAGT..............	19	1	1.00	1	0	0	1	0
............CGCCGC---------CGATAGCCGGGAGGC..........................................................................................................................................................................................	21	1	1.00	1	0	0	0	1
......CGAGGACGCCGC---------CGATAGCCGGGA.............................................................................................................................................................................................	24	1	1.00	1	0	0	1	0
...............................AGCCGGGAGGCCAGTCTG...................................................................................................................................................................................	18	1	1.00	1	0	0	1	0
..............CCGC---------CGATAGCCGGGAGGCCAGT......................................................................................................................................................................................	23	1	1.00	1	0	0	1	0
............................................................................................................................................................................................................TT---CGAGTGCAAGGTGGCTT..	19	1	1.00	1	0	1	0	0
...............CGC---------CGATAGCCGGGAGGCCAGT......................................................................................................................................................................................	22	1	1.00	1	0	0	1	0
...............CGC---------CGATAGCCGGGAGGCCAGTCTGGA.................................................................................................................................................................................	27	1	1.00	1	0	0	1	0
...................................................................................................................................................................................................AGCAAGCAGTT---CGAGTGCAAG.........	21	1	1.00	1	0	1	0	0
...CTTCGAGGACGCCGC---------CGATA....................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0
............CGCCGC---------CGATAGCCGGGAGGCC.........................................................................................................................................................................................	22	1	1.00	1	0	0	1	0
.........................................................................................................................................................................................................CAGTT---CGAGTGCAAGGTGG.....	19	1	1.00	1	0	0	1	0
.................................................................................................................................................................................GCCGCCATCGCCGCTATCAGCAAGC..........................	25	1	1.00	1	0	0	1	0
......................................................................................................................................................................................................AAGCAGTT---CGAGTGCAAG.........	18	1	1.00	1	0	0	1	0
................................................................................................................................................................................CGCCGCCATCGCCGCTATC.................................	19	1	1.00	1	0	0	1	0
............CGCCGC---------CGATAGCCGGGAGGCCAGTCT....................................................................................................................................................................................	27	1	1.00	1	0	1	0	0
.............GCCGC---------CGATAGCCGGGAGGCCAGTCTGGA.................................................................................................................................................................................	29	1	1.00	1	0	1	0	0
...............................AGCCGGGAGGCCAGTCTGGA.................................................................................................................................................................................	20	1	1.00	1	0	0	1	0
..................................................................................................................................................................................................CAGCAAGCAGTT---CGAGTGCAAG.........	22	1	1.00	1	0	0	1	0
...CTTCGAGGACGCCGC---------CGATAGCC.................................................................................................................................................................................................	23	1	1.00	1	0	0	1	0
.............................ATAGCCGGGAGGCCAGTCTGGAGT...............................................................................................................................................................................	24	1	1.00	1	0	1	0	0
...............CGC---------CGATAGCCGGGAGGCCA........................................................................................................................................................................................	20	1	1.00	1	0	0	1	0

dm3

GACCTTCGAGGACGCCGC---------CGAGAGCCGGGAGGCCAGTCTGGAGTCACATGGTGGGTCAACA--ATAACGTACTACA----------AAG---GCGTCAATAAGACACACT-----------AATT----TAACAATGATT--TAA------------CACATTTAGACGCCGCCATAGCTGCTATCAGCAAGCAGTT---CGAGTGCAAGGTGGCTTAT	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
...........................................................................................................................................................................................................GTT---CGAGTGCAAGGTGGC....	18	1	12.00	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................GTT---CGAGTGCAAGGTGGCT...	19	1	11.00	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................GCAAGCAGTT---CGAGTGCAAGGTGG.....	24	1	9.00	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................AGCTGCTATCAGCAAGCAGTT---CGAGT..............	26	1	8.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8
............................GAGAGCCGGGAGGCCAGTCTGGA.................................................................................................................................................................................	23	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................AGTT---CGAGTGCAAGGTGGC....	19	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................AGTT---CGAGTGCAAGGTGG.....	18	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0
...............................AGCCGGGAGGCCAGTCTGGAGT...............................................................................................................................................................................	22	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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...................................................................................................................................................................................................AGCAAGCAGTT---CGAGTGCAAGGTGG.....	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................AGTT---CGAGTGCAAGGTGGCT...	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................GTT---CGAGTGCAAGGTGGCTTAT	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................CAAGCAGTT---CGAGTGCAAGGTGGC....	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0
..................................................................................................................................................................................................................GAGTGCAAGGTGGCTTAT	18	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................CAGTT---CGAGTGCAAGGTGGC....	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
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...........................CGAGAGCCGGGAGGCCAGTCTGGA.................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........GGACGCCGC---------CGAGAGCC.................................................................................................................................................................................................	17	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................CAGTT---CGAGTGCAAGGTGGCT...	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................C---------CGAGAGCCGGGAGGCCAGTCTGGAGT...............................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................AGTCTGGAGTCACATGAC.......................................................................................................................................................................	18	4	0.25	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..CCTTCGAGGACGCCGC---------CAGA.....................................................................................................................................................................................................	20	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

GACCTTCGAGGATGCCGC---------CAAGAGCCGGGAGGACAGTCTAGAGTCACATGGTGGGTCAACA--TT----------A----------AAG---TACTCAATAAGACACACT-----------AATT----TAACCATGCTT--AAA------------CCCCCTTAGACGCCGCCATTGCCGCTATCAGCAAGCAGTT---CGAGTGCAAGGTGGCTTAT	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
................GC---------CAAGAGCCGGGAGGACA........................................................................................................................................................................................	19	1	6.00	6	2	0	1	0	3	0	0
................................................................................................................................................................................................ATCAGCAAGCAGTT---CGAGTGCAAGGT.......	26	1	5.00	5	0	0	1	0	3	1	0
GACCTTCGAGGATGCCGC---------CAAGAGC..................................................................................................................................................................................................	25	1	4.00	4	0	0	0	0	3	1	0
..........................................................................................................................................................................................................AGTT---CGAGTGCAAGGTGGC....	19	1	4.00	4	0	0	0	0	2	2	0
......................................................................................................................................................................................................AAGCAGTT---CGAGTGCAAGGT.......	20	1	3.00	3	0	1	0	0	1	1	0
...........ATGCCGC---------CAAGAGCCGGGAGGACA........................................................................................................................................................................................	24	1	3.00	3	1	0	0	0	2	0	0
..........GATGCCGC---------CAAGAGCCGGGAGGACA........................................................................................................................................................................................	25	1	3.00	3	1	0	0	0	2	0	0
.........GGATGCCGC---------CAAGAGCCGGGAGGACA........................................................................................................................................................................................	26	1	3.00	3	1	0	0	0	1	1	0
......................................................................................................................................................................................................AAGCAGTT---CGAGTGCAAG.........	18	1	3.00	3	0	0	0	0	2	1	0
...........................CAAGAGCCGGGAGGACAGTC.....................................................................................................................................................................................	20	1	2.00	2	1	0	0	0	1	0	0
...........................................................................................................................................................................................................GTT---CGAGTGCAAGGTGGC....	18	1	2.00	2	2	0	0	0	0	0	0
...........ATGCCGC---------CAAGAGCCGGGAGGAC.........................................................................................................................................................................................	23	1	2.00	2	2	0	0	0	0	0	0
......................................................................................................................................................................................................AAGCAGTT---CGAGTGCAAGGTGGC....	23	1	2.00	2	0	0	0	1	0	1	0
......................................................................................................................................................................................................AAGCAGTT---CGAGTGCAAGGTG......	21	1	2.00	2	0	0	0	0	1	1	0
........................................................................................................................................................................................................GCAGTT---CGAGTGCAAGGTGGCT...	22	1	2.00	2	0	0	0	0	1	1	0
....TTCGAGGATGCCGC---------CAAG.....................................................................................................................................................................................................	18	1	2.00	2	1	0	0	0	0	1	0
....................................................................................................................................................................................................GCAAGCAGTT---CGAGTGCAAGGTGGC....	25	1	2.00	2	1	0	0	0	1	0	0
GACCTTCGAGGATGCCGC---------CAAG.....................................................................................................................................................................................................	22	1	2.00	2	0	0	0	0	2	0	0
..........GATGCCGC---------CAAGAGCCGGGA.............................................................................................................................................................................................	20	1	2.00	2	0	0	0	2	0	0	0
................................................................................................................................................................................................ATCAGCAAGCAGTT---CGAGTGCAAGGTG......	27	1	2.00	2	1	0	0	0	1	0	0
........................................................................................................................................................................................................GCAGTT---CGAGTGCAAGGT.......	18	1	2.00	2	0	0	0	0	2	0	0
................................................................................................................................................................................................ATCAGCAAGCAGTT---CGAGTGCA...........	22	1	2.00	2	0	1	0	0	1	0	0
...........................................................................................................................................................................................................GTT---CGAGTGCAAGGTGGCTTAT	22	1	2.00	2	0	0	0	0	2	0	0
........................................................................................................................................................................................................GCAGTT---CGAGTGCAAGGTGG.....	20	1	2.00	2	0	0	0	0	0	2	0
........................................................................................................................................................................................................GCAGTT---CGAGTGCAAGGTGGC....	21	1	2.00	2	0	0	0	0	0	2	0
...............CGC---------CAAGAGCCGGGAGGACA........................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	1	1	0
.......................................................................................................................................................................................................AGCAGTT---CGAGTGCAAGGTGGCT...	23	1	2.00	2	1	0	0	0	1	0	0
...........................CAAGAGCCGGGAGGACAGTCTAGAGT...............................................................................................................................................................................	26	1	2.00	2	2	0	0	0	0	0	0
...............CGC---------CAAGAGCCGGGAGGACAGT......................................................................................................................................................................................	22	1	2.00	2	0	0	0	1	1	0	0
...........................................................................................................................................................................................CCGCTATCAGCAAGCAGTT---CG.................	21	1	1.00	1	0	0	0	0	1	0	0
......CGAGGATGCCGC---------CAAGAG...................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0	0	0
.....................................................................................................................................................................................................CAAGCAGTT---CGAGTGCAAGGTGGC....	24	1	1.00	1	0	0	0	0	1	0	0
......................................................................................................................................................................................CATTGCCGCTATCAGCAAGCA.........................	21	1	1.00	1	0	0	0	0	0	1	0
....................................................................................................................................................................................GCCATTGCCGCTATCAGCAA............................	20	1	1.00	1	1	0	0	0	0	0	0
...........................................................................................................................................................................................................GTT---CGAGTGCAAGGTGGCT...	19	1	1.00	1	0	0	0	0	0	1	0
.................................CCGGGAGGACAGTCTAGAGTCACATGAC.......................................................................................................................................................................	28	1	1.00	1	0	0	0	0	1	0	0
..............................GAGCCGGGAGGACAGTCTAGAGTCACAT..........................................................................................................................................................................	28	1	1.00	1	0	0	0	0	1	0	0
......CGAGGATGCCGC---------CAAGAGC..................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0
................................GCCGGGAGGACAGTCTAGAGTCA.............................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0	0
...................................................................................................................................................................................................AGCAAGCAGTT---CGAGTGCAAGGTGGCT...	27	1	1.00	1	0	0	0	1	0	0	0
.ACCTTCGAGGATGCCGC---------CAAGA....................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0	0
GACCTTCGAGGATGCCGC---------CAAGAG...................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0	0
..........................................................................................................................................................................................................AGTT---CGAGTGCAAGGTGGCTT..	21	1	1.00	1	0	0	0	0	0	1	0
......CGAGGATGCCGC---------CAAGAGCCGGGAG............................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	1	0	0
................................GCCGGGAGGACAGTCTAGAGT...............................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0
...................................GGGAGGACAGTCTAGAGTCACA...........................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
.ACCTTCGAGGATGCCGC---------CAAG.....................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
.............................................................................................................................................................................................GCTATCAGCAAGCAGTT---CGA................	20	1	1.00	1	1	0	0	0	0	0	0
.................................................................................................................................................................................................TCAGCAAGCAGTT---CGAGT..............	18	1	1.00	1	0	0	0	0	1	0	0
...............................................................................................................................................................................................TATCAGCAAGCAGTT---CGAGTGCAAGGT.......	27	1	1.00	1	0	1	0	0	0	0	0
.................................CCGGGAGGACAGTCTAGA.................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	1	0	0
GACCTTCGAGGATGCCGC---------C........................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0
....TTCGAGGATGCCGC---------CAAGAGCCGGGA.............................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
............................AAGAGCCGGGAGGACAGTC.....................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0
..................................................................................................................................................................................................CAGCAAGCAGTT---CGAGTG.............	18	1	1.00	1	1	0	0	0	0	0	0
............................AAGAGCCGGGAGGACAGTCT....................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
.........GGATGCCGC---------CAAGAGCCG................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0
.......................................................................................................................................................................................................AGCAGTT---CGAGTGCAAGGTGG.....	21	1	1.00	1	0	0	0	0	0	1	0
................................................................................................................................................................................................ATCAGCAAGCAGTT---CGAGT..............	19	1	1.00	1	0	0	0	0	1	0	0
...............CGC---------CAAGAGCCGGGAGGACAGTCTA...................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
..................................................................................................................................................................................................CAGCAAGCAGTT---CGAGTGCAAGGT.......	24	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................................................................................................................TATCAGCAAGCAGTT---CGAGTGCAAT.........	25	1	1.00	1	0	0	0	1	0	0	0
..........................................................................................................................................................................................................AGTT---CGAGTGCAAGGTGG.....	18	1	1.00	1	0	0	0	0	0	1	0
..........................................................................................................................................................................................GCCGCTATCAGCAAGCAGTT---...................	20	1	1.00	1	0	0	0	0	1	0	0
..................................CGGGAGGACAGTCTAGAGTCACATGAC.......................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0
....TTCGAGGATGCCGC---------CAAGAGCC.................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0	0
.......................................................................................................................................................................................................AGCAGTT---CGAGTGCAAGGT.......	19	1	1.00	1	0	0	0	0	0	1	0
......................................................................................................................................................................................................AAGCAGTT---CGAGTGCAAGGTGG.....	22	1	1.00	1	0	0	0	0	1	0	0
..................................CGGGAGGACAGTCTAGAGTCACAT..........................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1	0
...............................................................................................................................................................................................TATCAGCAAGCAGTT---CGAGTGCAAG.........	25	1	1.00	1	0	0	0	0	0	1	0
................GC---------CAAGAGCCGGGAGGACAGT......................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0
....................................................................................................................................................................................................GCAAGCAGTT---CGAGTGCAAGGT.......	22	1	1.00	1	0	0	0	0	1	0	0
.......GAGGATGCCGC---------CAAGAGCCGGGAGGAC.........................................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0	0	0
..................................................................................................................................................................................CCGCCATTGCCGCTATCAGCAAGC..........................	24	1	1.00	1	0	1	0	0	0	0	0
...CTTCGAGGATGCCGC---------CAAGAGC..................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
..........................................................................................................................................................................................................AGTT---CGAGTGCAAGGTGGCT...	20	1	1.00	1	0	0	0	0	1	0	0
................................................................................................................................................................................................ATCAGCAAGCAGTT---CGAGTGCAAGGG.......	26	1	1.00	1	0	0	0	0	1	0	0
............................................................................................................................................................................................CGCTATCAGCAAGCAGTT---CGA................	21	1	1.00	1	1	0	0	0	0	0	0
...................................GGGAGGACAGTCTAGAGT...............................................................................................................................................................................	18	1	1.00	1	0	0	0	0	1	0	0
.......................................GGACAGTCTAGAGTCACATGAC.......................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
....TTCGAGGATGCCGC---------CAAGAGC..................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0
.........................................................................................................................................................................................TGCCGCTATCAGCAAGCA.........................	18	1	1.00	1	0	0	0	0	0	1	0
.......................................................................................................................................................................................................AGCAGTT---CGAGTGCAAGGTG......	20	1	1.00	1	0	0	0	0	0	1	0
................GC---------CAAGAGCCGGGAGGAC.........................................................................................................................................................................................	18	2	0.50	1	0	1	0	0	0	0	0

droYak3

GACCTTCGAAGACGCCGC---------CACAAGCCGCGAGGCCAGTCTGGAGTCACATGGTGGGTCAACA--TTAAATTACTACA----------AAA---GCGTCAATAAGACACACT-----------AACT----TAACCATAATT--GAA-----------CCCATTTCAGACGCCGCCATTGCCGCTATCAGCAAGCAGTT---CGAGTGCAAGGTGGCTTAT	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.............................CAAGCCGCGAGGCCAGTCTGGAGT...............................................................................................................................................................................	24	1	3.00	3	0	0	0	0	0	0	2	0	0	0	1
..............................AAGCCGCGAGGCCAGTCTGGAGT...............................................................................................................................................................................	23	1	3.00	3	0	1	1	0	0	0	1	0	0	0	0
......................................................................................................................................................................................................AAGCAGTT---CGAGTGCAAGGTGGCT...	24	1	3.00	3	0	0	1	0	0	0	2	0	0	0	0
...........................CACAAGCCGCGAGGCCAGTCTGGAGT...............................................................................................................................................................................	26	1	3.00	3	0	1	0	0	0	0	2	0	0	0	0
..................................................................................................................................................................................................CAGCAAGCAGTT---CGAGTGCAAGGT.......	24	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
...........................CACAAGCCGCGAGGCCAGT......................................................................................................................................................................................	19	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................AGTT---CGAGTGCAAGGTGG.....	18	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................GCAGTT---CGAGTGCAAGGTGGCT...	22	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................GCAGTT---CGAGTGCAAGGTGGC....	21	1	2.00	2	0	1	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................AAGCAGTT---CGAGTGCAAGGTG......	21	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
............................ACAAGCCGCGAGGCCAGTCTGGAGTC..............................................................................................................................................................................	26	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................CAGCAAGCAGTT---CGAGTGCAAGGTGGC....	27	1	2.00	2	0	1	0	0	0	0	1	0	0	0	0
.......................................................................................................................................................................................................AGCAGTT---CGAGTGCAAGGT.......	19	1	2.00	2	0	1	0	0	0	0	1	0	0	0	0
..................................................................................................................................................................................................CAGCAAGCAGTT---CGAGTGCAAGGTG......	25	1	2.00	2	0	1	0	0	0	0	1	0	0	0	0
...........................................................................................................................................................................................................GTT---CGAGTGCAAGGTGGCT...	19	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
...........ACGCCGC---------CACAAGCCGCGAGGC..........................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................AAGCAGTT---CGAGTGCAAGGTGG.....	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...............................AGCCGCGAGGCCAGTCTGGAGT...............................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.............................CAAGCCGCGAGGCCAGTCTGGAGC...............................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
............................ACAAGCCGCGAGGCCAGTCTGGAGT...............................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...................................GCGAGGCCAGTCTGGAGT...............................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................AGCAAGCAGTT---CGAGTGCAAG.........	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........................CACAAGCCGCGAGGCCAGTCTGGA.................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................CTATCAGCAAGCAGTT---CGAGTGCAAGGT.......	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
GACCTTCGAAGACGCCGC---------CACAA....................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................AAGCAGTT---CGAGTGCAAGGT.......	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.......................................................................................................................................................................................ATTGCCGCTATCAGCAAGCAGTT---CG.................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..........................................................................................................................................................................................................AGTT---CGAGTGCAAGGTGGCC...	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................GCAAGCAGTT---CGAGTGCAAGGTGG.....	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................CGCCATTGCCGCTATCAGCA.............................	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
.............................CAAGCCGCGAGGCCAGTCTGGAGTC..............................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................AGCAGTT---CGAGTGCAAGG........	18	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.................C---------CACAAGCCGCGAGGCCAGTCTGGAGT...............................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................GCCGCCATTGCCGCTATCAGCAAGC..........................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........................CACAAGCCGCGAGGCCAGTCTGGAGTC..............................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
................................GCCGCGAGGCCAGTCTGGAGTCAC............................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
GACCTTCGAAGACGCCGC---------CAC......................................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...............................AGCCGCGAGGCCAGTCTGGAGTC..............................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................TATCAGCAAGCAGTT---CGAGT..............	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................GCCATTGCCGCTATCAGCAAGCAGTT---CGA................	29	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................GCCATTGCCGCTATCAGCAAGC..........................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................AGTT---CGAGTGCAAGGTGGCTTAT	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
....TTCGAAGACGCCGC---------CACA.....................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................TT---CGAGTGCAAGGTGGCTT..	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................AGCAAGCAGTT---CGAGTGCAAGGTGGC....	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...........................................................................................................................................................................................................GTT---CGAGTGCAAGGTGGC....	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................GCAAGCAGTT---CGAGTGCAAGGTGGCT...	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
....................................................................................................................................................................................GCCATTGCCGCTATCAGC..............................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...........................CACAAGCCGCGAGGCCAGTCTG...................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
GACCTTCGAAGACGCCGC---------CA.......................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................ATCAGCAAGCAGTT---CGAGTGCAAGGT.......	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
............................ACAAGCCGCGAGGCCAGTCTGGA.................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................ACGCCGCCATTGCCGCTATCAGCAAGC..........................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................ACGCCGCCATTGCCGCTATCAGC..............................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.............................CAAGCCGCGAGGCCAGTCTGGA.................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
........................................................................................................................................................................................................GCAGTT---CGAGTGCAAGGTG......	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................CGCTATCAGCAAGCAGTT---CGAGT..............	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................CTACA----------AAA---GCGTCAATAAGACACA...............................................................................................................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...............................................................................................................................................................................................TATCAGCAAGCAGTT---CGAGTGCAAGGTG......	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.............GCCGC---------CACAAGCCGCGAGGCC.........................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................CATTGCCGCTATCAGCAAGCAGTT---CGA................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
............CGCCGC---------CACAAGCCGCGAGG...........................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................CGAGTGCAAGGTGGCTTAT	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..........................................................................................................................................................................................GCCGCTATCAGCAAGCAGTT---CGA................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
GACCTTCGAAGACGCCGC---------.........................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................CCGCTATCAGCAAGCAGTT---CGAGTGC............	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................GCAAGCAGTT---CGAGTGCAAGGTGGC....	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................................CGCGAGGCCAGTCTGGAGTCAC............................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0

droEug1

GAGCTTTGAGGATTCTGC---------AGAGAGCCGAGAGTCCAGCCTGGAGTCACATGGTGGGTAATACCA------------A----------AAA---CAGCAAATTTGACACACT-----------TAAG----TTACTATGTTT--AAA------A----TAATTTTCAGATGCCGCCATTGCCGCTATCAGCAAGCAGTT---CGATTGCAAGGTGGCTTAT	Size	Hit Count	Total Norm	Total
No Reads

droBia1

GAGCTTCGAGGACGCCAC---------CGAGAGCCGCGAGTCCAGCCTGGAGTCACATGGTGGGTGATCA--TCAGC-----AGA----------AAG---CAGTCAATGTGACACACT-----------TAAT----TTACAA---------A-----------CCACTTTCAGACGCCGCCATCGCCGCTATCAGCAAGCAGTT---CGATTGCAAGGTGGCATAT	Size	Hit Count	Total Norm	Total
No Reads

droTak1

GAGCTTCGAGGACGCCGC---------CGAGACCCGGGAGGCCAGCCTGGAGTCACATGGTGGGTCATCA-------------CA----------GAG---CGGCCAATGTGACACACT-----------TACT----TTACCATGTTTCACCTTAAAA-A---TCCCCCCTCAGACGCCGCCATCGCCGCTATCAGCAAGCAGTT---CGAGTGCAAGGTGGCTTAT	Size	Hit Count	Total Norm	Total
No Reads

droEle1

GAGCTTCGAGGATGCCGT---------CGAGAGCAGGGAGGATGTTTTGGAGGCACATGGTGGGTCATGCGG----C-----AAACAGC------AAA---CAGGCAATGTGACACACT-----------TATT----TAACTATGCTA--TTA----------TCCACATTCAGACGCCGCCATCGCCGCTATCAGCAAGCAGTT---CGAGTGCAAGGTGGCTTAT	Size	Hit Count	Total Norm	Total
No Reads

droRho1

GAGCTTCGAAGACGCCGC---------CGCTAGCCGTGAGGACAGTCTGGAGTCACATGGTGGGTCATACAG------------A----------AAT---CATACAATGTGACACACT-----------TATT----TTACTATACAA--TAT-----------CCACCTTCAGACGCCGCCATCGCCGCTATCAGCAAACAGTT---CGAGTGCAAGGTGGCTTAT	Size	Hit Count	Total Norm	Total
No Reads

droFic1

GACCTTCGAGGACGCTGC---------TGAGAGCCGCCAGGCCAGCCTGGAGTCACATGGTGGGTGAACAC-----------ACA----------AAG---CAACTAATATCACACACT-----------TACT----TGACCATGTTT--ACA-----------CCACATTTAGACGCCGCCATTGCCGCTATCAGCAAGCAGTT---CGATTGCAAGGTGGCTTAT	Size	Hit Count	Total Norm	Total
No Reads

droKik1

GAGCTTCGAGGATGCGGC---------CGAGAGCCGCGAGCAGACTTTGGAGTCACATGGTGCGTTAAACA-T-----------A----------TAT--ACAAACAATGTGACCCACA-----------TGCT----ATATAGTATAT--ACT------CT--TCCTCGCGCAGACGCCGCCATCGCCGCTATCAGCAAGCAGTT---TGAGTGCAAGGTGGCTTAT	Size	Hit Count	Total Norm	Total
No Reads

droAna3

CAGCTTCGAGGATTCGAA---------GGAGAGTCGCGAGGCCACCCTGGAGTCACATGGTTAGTAAGCCAA-------------CAAACT-------------TCCAGGTGATCACCT-----------CACC----TCAATCTTCCA--CTTCC----A----ACTCCCGCAGACGCTGCCATCGCCGCTATCAGCAAGCAGTT---TGAGTGCAAGGTTGCTTAT	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
...............................AGTCGCGAGGCCACCCTGGA.................................................................................................................................................................................	20	1	3.00	3	0	1	1	0	0	1
..............CGAA---------GGAGAGTCGCGAGGC..........................................................................................................................................................................................	19	1	3.00	3	0	3	0	0	0	0
.......GAGGATTCGAA---------GGAGAGTCGCGAGGC..........................................................................................................................................................................................	26	1	3.00	3	0	1	0	0	2	0
...........................................................................................................................................................................................................GTT---TGAGTGCAAGGTTGCT...	19	1	3.00	3	0	0	1	0	1	1
...................................GCGAGGCCACCCTGGAGT...............................................................................................................................................................................	18	1	2.00	2	2	0	0	0	0	0
..........................................................................................................................................................................................................AGTT---TGAGTGCAAGGTTGCTT..	21	1	2.00	2	0	2	0	0	0	0
..........GATTCGAA---------GGAGAGTCGCGA.............................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	2	0
.......................................................................................................................................................................................................AGCAGTT---TGAGTGCAAGGT.......	19	1	2.00	2	0	0	0	0	1	1
..............................GAGTCGCGAGGCCACCCTGGAGTC..............................................................................................................................................................................	24	1	2.00	2	1	1	0	0	0	0
......CGAGGATTCGAA---------GGAGAGT..................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0
.............................AGAGTCGCGAGGCCACCCTGGAG................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
...........................GGAGAGTCGCGAGGCCACCCTGGA.................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0
.................A---------GGAGAGTCGCGAGGCCACCCTGGA.................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................GCAAGCAGTT---TGAGTGCAAGGTTG.....	24	1	1.00	1	1	0	0	0	0	0
................................GTCGCGAGGCCACCCTGGAGTC..............................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
..............................................................................................................................................................................GACGCTGCCATCGCCGCTATCAGCAAGC..........................	28	1	1.00	1	0	1	0	0	0	0
....TTCGAGGATTCGAA---------GGAGA....................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0
.................................................................................................................................................................................GCTGCCATCGCCGCTATCAGCAA............................	23	1	1.00	1	0	0	1	0	0	0
.....................................................................................................................................................................................CCATCGCCGCTATCAGCAAGC..........................	21	1	1.00	1	0	1	0	0	0	0
......CGAGGATTCGAA---------GGAGAGTC.................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0
..................................CGCGAGGCCACCCTGGAGTCAC............................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0
...............................................................................................................................................................................................TATCAGCAAGCAGTT---TGAGTGCA...........	23	1	1.00	1	0	0	0	0	1	0
..............................GAGTCGCGAGGCCACCCTGG..................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
................................GTCGCGAGGCCACCCTGGA.................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0
....................................................................................................................................................................................GCCATCGCCGCTATCAGCAAGCA.........................	23	1	1.00	1	0	1	0	0	0	0
.........................................................................................................................................................................................................CAGTT---TGAGTGCAAGGTT......	18	1	1.00	1	0	0	1	0	0	0
..GCTTCGAGGATTCGAA---------GGAGAGTC.................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0
..GCTTCGAGGATTCGAA---------GGAGAGTCGCG..............................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	1	0
...................................................................................................................................................................................TGCCATCGCCGCTATCAGC..............................	19	1	1.00	1	0	1	0	0	0	0
...............GAA---------GGAGAGTCGCGAGGC..........................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0
............................GAGAGTCGCGAGGCCACCCT....................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................CTGCCATCGCCGCTATCAGCAA............................	22	1	1.00	1	0	1	0	0	0	0
.....................................GAGGCCACCCTGGAGTCA.............................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0
..................................................................................................................................................................................CTGCCATCGCCGCTATCAGCAAGC..........................	24	1	1.00	1	1	0	0	0	0	0
.......GAGGATTCGAA---------GGAGAGTCGCGAGG...........................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................................CGCCGCTATCAGCAAGCAGT.......................	20	1	1.00	1	0	1	0	0	0	0
............TTCGAA---------GGAGAGTCGCGAGGC..........................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
..................................CGCGAGGCCACCCTGGAGT...............................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0
..........................................................................................................................................................................................................AGTT---TGAGTGCAAGGTTG.....	18	1	1.00	1	0	1	0	0	0	0
............................GAGAGTCGCGAGGCCACCC.....................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0
.................................................................................................................................................................................GCTGCCATCGCCGCTATCAGCAAGC..........................	25	1	1.00	1	0	1	0	0	0	0
...........................GGAGAGTCGCGAGGCCACCCTGGAGT...............................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
...........................GGAGAGTCGCGAGGCCACCCTGGAGTCA.............................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................CATCGCCGCTATCAGCAAGCA.........................	21	1	1.00	1	0	1	0	0	0	0
.............................AGAGTCGCGAGGCCACCCT....................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0
...............GAA---------GGAGAGTCGCGAGGCCACCCTGGA.................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................CGCTGCCATCGCCGCTATCAGCAAGC..........................	26	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................................................................GCAGTT---TGAGTGCAAGGTTGC....	21	1	1.00	1	0	0	0	0	1	0
......CGAGGATTCGAA---------GGAGAGTCGCGAGG...........................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0
...............................AGTCGCGAGGCCACCCTGGAGT...............................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
..........GATTCGAA---------GGAGAGTCGC...............................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0
.............................AGAGTCGCGAGGCCACCCTT...................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
.................A---------GGAGAGTCGCGAGGCCACCCTGGAGT...............................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................AGTT---TGAGTGCAAGGTTGC....	19	1	1.00	1	0	0	1	0	0	0
...........................................................................................................................................................................................................GTT---TGAGTGCAAGGTTGCTTAT	22	1	1.00	1	0	0	0	0	1	0
.................A---------GGAGAGTCGCGAGGCCACCCT....................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0
....TTCGAGGATTCGAA---------GGAGAGT..................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
........AGGATTCGAA---------GGAGAGTCGCGAGGCCA........................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................CATCGCCGCTATCAGCAAGC..........................	20	1	1.00	1	0	1	0	0	0	0
.AGCTTCGAGGATTCGAA---------GGAGAGT..................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0
...................................................................................................................................................................................................AGCAAGCAGTT---TGAGTGC............	18	1	1.00	1	0	1	0	0	0	0
......CGAGGATTCGAA---------GGAGAGC..................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0
..........................................CACCCTGGAGTCACATGAC.......................................................................................................................................................................	19	3	0.33	1	0	1	0	0	0	0
...........................................ACCCTGGAGTCACATGAC.......................................................................................................................................................................	18	6	0.17	1	0	1	0	0	0	0

droBip1

CAGCTTCGAGGATTCGAA---------GGAGAGTCGCGAGGCCACCCTGGAGTCACATGGTTAGTAAGCAAA-------------CAATCT-------------TCCAGGTGATCACCT-----------CACC----TCAATCTTCCA--TTTCG----A----ACTCCCGTAGACGCTGCCATCGCCGCTATCAGCAAGCAGTT---TGAGTGCAAGGTGGCTTAT	Size	Hit Count	Total Norm	Total
No Reads

dp5

CAGCTTCGAGGATGACGA---------AGATACCCGCGAGGCTGTCCTGGAGTCACATGGTTTGTACACAGA-------------TCAGTTTGCGAGTGA--------GAATGGGTGCT-----------AATT----TCGTTGTGCT------------------CTTCGACAGACTCTGCCATTGCCGCTATCAGCAAGCAGTT---TGAGTGCAAGGTAGCTTAT	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
CAGCTTCGAGGATGACGA---------.........................................................................................................................................................................................................	18	1	5.00	5	0	5	0	0	0	0	0	0	0	0
...........................AGATACCCGCGAGGCTGTCCTGGAGT...............................................................................................................................................................................	26	1	5.00	5	0	4	1	0	0	0	0	0	0	0
.............................ATACCCGCGAGGCTGTCCTGGA.................................................................................................................................................................................	22	1	5.00	5	0	3	0	0	2	0	0	0	0	0
..................................................................................................................................................................................CTGCCATTGCCGCTATCAGCAAGC..........................	24	1	3.00	3	0	0	2	0	1	0	0	0	0	0
..............................TACCCGCGAGGCTGTCCTGGAGTCACAA..........................................................................................................................................................................	28	1	3.00	3	0	0	0	0	0	0	0	3	0	0
.............................ATACCCGCGAGGCTGTCCTGGAGT...............................................................................................................................................................................	24	1	3.00	3	0	3	0	0	0	0	0	0	0	0
..............................................................................................................................................................................GACTCTGCCATTGCCGCTATCAGCAAGC..........................	28	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................GCTATCAGCAAGCAGTT---TGAGTGC............	24	1	2.00	2	0	1	1	0	0	0	0	0	0	0
..............................TACCCGCGAGGCTGTCCTGG..................................................................................................................................................................................	20	1	2.00	2	0	2	0	0	0	0	0	0	0	0
...............CGA---------AGATACCCGCGAGGCT.........................................................................................................................................................................................	19	1	2.00	2	0	2	0	0	0	0	0	0	0	0
CAGCTTCGAGGATGACGA---------A........................................................................................................................................................................................................	19	1	2.00	2	0	1	0	0	1	0	0	0	0	0
..............................TACCCGCGAGGCTGTCCTGGAGT...............................................................................................................................................................................	23	1	2.00	2	0	2	0	0	0	0	0	0	0	0
................GA---------AGATACCCGCGAGGCT.........................................................................................................................................................................................	18	1	2.00	2	0	2	0	0	0	0	0	0	0	0
.............GACGA---------AGATACCCGCGAGGCT.........................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	2	0	0	0
................................................................................................................................................................................................ATCAGCAAGCAGTT---TGAGTGC............	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................ACCCGCGAGGCTGTCCTGGAGTCACAT..........................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................AGCAGTT---TGAGTGCAAGGTAGCT...	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0
.........GGATGACGA---------AGATACCCGCGAGGCT.........................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................GTT---TGAGTGCAAGGTAGCTTAT	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0
.................................CCGCGAGGCTGTCCTGGAGT...............................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................GATACCCGCGAGGCTGTCCT....................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................GACTCTGCCATTGCCGCTATCAGCA.............................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................ATACCCGCGAGGCTGTCCTGC..................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0
............................GATACCCGCGAGGCTGTCCTGGA.................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................GA---------AGATACCCGCGAGGCTGTCCTGGAGT...............................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................AGCAAGCAGTT---TGAGTGCAA..........	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........GGATGACGA---------AGATACCCGC...............................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................AAGCAGTT---TGAGTGCAAGGTAGCT...	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................CGCTATCAGCAAGCAGTT---TGAGTGCAAG.........	28	1	1.00	1	0	0	0	0	1	0	0	0	0	0
...............................ACCCGCGAGGCTGTCCTGGAGT...............................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0	0	0	0	0
............................GATACCCGCGAGGCTGTCCTGGAGT...............................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................GACTCTGCCATTGCCGCTATCAGC..............................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................ACCCGCGAGGCTGTCCTGGA.................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0	0	0	0
......CGAGGATGACGA---------AGATACCCGCGA.............................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................CTCTGCCATTGCCGCTATCAGCAAG...........................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................TGCCGCTATCAGCAAGCAGTT---TG.................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......CGAGGATGACGA---------AGATACCCG................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............CGA---------AGATACCCGCGAGGCTGTCCT....................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............CGA---------AGATACCCGCGAGGCTGTC......................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0
...............................................................................................................................................................................................TATCAGCAAGCAGTT---TGAGTG.............	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................GCTATCAGCAAGCAGTT---TG.................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......GAGGATGACGA---------AGATACCCGCGAGGCT.........................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0
............................................................................................................................................................................................................TT---TGAGTGCAAGGTAGCTTA.	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0
................................................................................................................................................................................................ATCAGCAAGCAGTT---TGAGTGCAAG.........	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........GATGACGA---------AGATACCCGCGAGGCTGTC......................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................GCAGTT---TGAGTGCAAGGTAGC....	21	1	1.00	1	0	0	0	0	1	0	0	0	0	0
...................................................................................................................................................................................................AGCAAGCAGTT---TGAGTGCAAG.........	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................AGATACCCGCGAGGCTGTC......................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0	0	0	0
......................................................................................................................................................................................................AAGCAGTT---TGAGTGCAAGGT.......	20	1	1.00	1	0	0	0	0	1	0	0	0	0	0
..................................................................................................................................................................................................CAGCAAGCAGTT---TGAGTGCAAG.........	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........AGGATGACGA---------AGATACCCGCGAGGCTG........................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................CTGCCATTGCCGCTATCAGCA.............................	21	1	1.00	1	0	0	0	0	1	0	0	0	0	0
...............CGA---------AGATACCCGCGAGGCTGTCCTGGA.................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................CTGCCATTGCCGCTATCAGCAAGCA.........................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................GTT---TGAGTGCAAGGTAGCTT..	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0
..........................................................................................................................................................................................................AGTT---TGAGTGCAAGGTAG.....	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......CGAGGATGACGA---------AGATACCCGCGAGGCT.........................................................................................................................................................................................	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0
...........ATGACGA---------AGATACCCGCGAGGC..........................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................ATTGCCGCTATCAGCAAGCAGTT---TGA................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0

droPer2

CAGCTTCGAGGATGACGA---------AGATACCCGCGAGGCTGTCCTGGAGTCACATGGTTTGTACACAGA-------------TCAGTTTGCGAGTGA--------GAATGGGTGCT-----------AATT----TCATTGTGCT------------------CTTCGACAGACTCTGCCATTGCCGCTATCAGCAAGCAGTT---TGAGTGCAAGGTAGCTTAT	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.............................ATACCCGCGAGGCTGTCCTGGAGT...............................................................................................................................................................................	24	1	5.00	5	4	1	0	0	0	0
......CGAGGATGACGA---------AGATACCCGCGA.............................................................................................................................................................................................	24	1	3.00	3	2	0	0	0	0	1
...........ATGACGA---------AGATACCCGCGAGGCT.........................................................................................................................................................................................	23	1	3.00	3	0	0	1	0	0	2
CAGCTTCGAGGATGACGA---------.........................................................................................................................................................................................................	18	1	3.00	3	2	0	1	0	0	0
.............................ATACCCGCGAGGCTGTCCTGGA.................................................................................................................................................................................	22	1	3.00	3	3	0	0	0	0	0
.........GGATGACGA---------AGATACCCGCGAGGCT.........................................................................................................................................................................................	25	1	3.00	3	0	0	0	0	0	3
.............GACGA---------AGATACCCGCGAGGCT.........................................................................................................................................................................................	21	1	3.00	3	0	0	1	0	0	2
.............GACGA---------AGATACCCGCGAGGCTGT.......................................................................................................................................................................................	23	1	2.00	2	2	0	0	0	0	0
........AGGATGACGA---------AGATACCCGCGAGGCT.........................................................................................................................................................................................	26	1	2.00	2	2	0	0	0	0	0
......CGAGGATGACGA---------AGATACCCGCGAGGCT.........................................................................................................................................................................................	28	1	2.00	2	0	0	0	0	0	2
................................................................................................................................................................................................ATCAGCAAGCAGTT---TGAGTGCA...........	22	1	2.00	2	0	0	0	0	0	2
.................................................................................................................................................................................................................TGAGTGCAAGGTAGCTTAT	19	1	1.00	1	0	0	0	0	0	1
......CGAGGATGACGA---------AGATACCCGCGAGG...........................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
CAGCTTCGAGGATGACGA---------A........................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1
..............................................................................................................................................................................GACTCTGCCATTGCCGCTATC.................................	21	1	1.00	1	0	0	1	0	0	0
................GA---------AGATACCCGCGAGGCTG........................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0
.................................................................................................................................................................................TCTGCCATTGCCGCTATCAGCAAGC..........................	25	1	1.00	1	1	0	0	0	0	0
............TGACGA---------AGATACCCGCGAGGCTGTC......................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................................................................................TATCAGCAAGCAGTT---TGAGT..............	20	1	1.00	1	0	1	0	0	0	0
..............ACGA---------AGATACCCGCGAGGCT.........................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................................................................ATCAGCAAGCAGTT---TGAGTG.............	20	1	1.00	1	0	0	1	0	0	0
...................................GCGAGGCTGTCCTGGAGT...............................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0
.........GGATGACGA---------AGATACCCGCGAGGG..........................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0
.............................ATACCCGCGAGGCTGTCCTGG..................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1
.......GAGGATGACGA---------AGATACCCGC...............................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
...........................AGATACCCGCGAGGCTGT.......................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
.............................ATACCCGCGAGGCTGTCCT....................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
.........GGATGACGA---------AGATACCCGCGAGGC..........................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0
....................................................................................................................................................................................................GCAAGCAGTT---TGAGTGCAAGGTAGC....	25	1	1.00	1	0	0	0	0	0	1
...........................AGATACCCGCGAGGCTGTCCTGGAGT...............................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	1
........................................................................................................................................................................................................GCAGTT---TGAGTGCAAGGT.......	18	1	1.00	1	0	1	0	0	0	0
...........................AGATACCCGCGAGGCTGG.......................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
................GA---------AGATACCCGCGAGGCT.........................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0
............................GATACCCGCGAGGCTGTC......................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
...........ATGACGA---------AGATACCCGCGAGGCTG........................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................ATCAGCAAGCAGTT---TGAGTGCAAG.........	24	1	1.00	1	0	1	0	0	0	0
.......GAGGATGACGA---------AGATACCCGCGA.............................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0

droWil2

AACCTTTGATGATGCCGATGCTGATGTGGAGACACGTGAAGCTAAATTGGAGTCACATGGTAAGTGTA------------TTACA----------AAG---GC-------AAATGCATTTCTTCAGTACTAA---------------CT--GA------------TTCATTGCAGACGCTGCTATTGCTGCCATCACCAAGCAATT---GGAGTGCAAAGTGGCTTAT	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
................GATGCTGATGTGGAGACAC.................................................................................................................................................................................................	19	1	39.00	39	0	1	17	21	0
.......GATGATGCCGATGCTGATGTGGA......................................................................................................................................................................................................	23	1	20.00	20	0	1	3	16	0
..........GATGCCGATGCTGATGTGGA......................................................................................................................................................................................................	20	1	13.00	13	0	1	3	9	0
...................................GTGAAGCTAAATTGGAGTCA.............................................................................................................................................................................	20	1	8.00	8	0	0	3	4	1
......TGATGATGCCGATGCTGATGTGGA......................................................................................................................................................................................................	24	1	7.00	7	0	0	4	3	0
..........................................................................................................................................................................................................AATT---GGAGTGCAAAGTGGC....	19	1	7.00	7	0	1	2	4	0
..............................GACACGTGAAGCTAAATTGGAGTC..............................................................................................................................................................................	24	1	6.00	6	0	1	2	3	0
................GATGCTGATGTGGAGACACGTGAAG...........................................................................................................................................................................................	25	1	6.00	6	0	0	5	1	0
...............CGATGCTGATGTGGAGACAC.................................................................................................................................................................................................	20	1	5.00	5	0	0	0	5	0
..............................GACACGTGAAGCTAAATTGGA.................................................................................................................................................................................	21	1	4.00	4	0	1	2	1	0
..................................CGTGAAGCTAAATTGGAGTCA.............................................................................................................................................................................	21	1	4.00	4	0	0	3	1	0
................GATGCTGATGTGGAGACACGT...............................................................................................................................................................................................	21	1	3.00	3	0	0	2	1	0
..........GATGCCGATGCTGATGTGGAGACAC.................................................................................................................................................................................................	25	1	3.00	3	0	0	0	3	0
...........ATGCCGATGCTGATGTGGAGACAC.................................................................................................................................................................................................	24	1	3.00	3	0	0	2	1	0
...................................GTGAAGCTAAATTGGAGT...............................................................................................................................................................................	18	1	3.00	3	0	0	0	3	0
..............................GACACGTGAAGCTAAATTGGAGTCA.............................................................................................................................................................................	25	1	3.00	3	0	0	2	1	0
.......GATGATGCCGATGCTGATGTGGAGA....................................................................................................................................................................................................	25	1	2.00	2	0	0	0	2	0
.........TGATGCCGATGCTGATGTGGA......................................................................................................................................................................................................	21	1	2.00	2	0	0	0	2	0
...........ATGCCGATGCTGATGTGGA......................................................................................................................................................................................................	19	1	2.00	2	0	0	0	2	0
............TGCCGATGCTGATGTGGAGACA..................................................................................................................................................................................................	22	1	2.00	2	0	0	0	2	0
......TGATGATGCCGATGCTGATGTGGAGAC...................................................................................................................................................................................................	27	1	2.00	2	0	1	0	1	0
.......................................................................................................................................................................................ATTGCTGCCATCACCAAGCA.........................	20	1	2.00	2	0	0	0	2	0
.....TTGATGATGCCGATGCTGATGTGGA......................................................................................................................................................................................................	25	1	2.00	2	0	0	0	1	1
..........GATGCCGATGCTGATGTGGAGA....................................................................................................................................................................................................	22	1	2.00	2	0	0	1	1	0
..........................................................................................................................................................................................................AATT---GGAGTGCAAAGTGG.....	18	1	2.00	2	0	0	0	2	0
.......................................................................................................................................................................................ATTGCTGCCATCACCAAGC..........................	19	1	2.00	2	0	0	0	2	0
..............................GACACGTGAAGCTAAATTGGAGT...............................................................................................................................................................................	23	1	2.00	2	0	0	2	0	0
..............................GACACGTGAAGCTAAATTGGAG................................................................................................................................................................................	22	1	2.00	2	0	0	1	1	0
..........................................................................................................................................................................................................AATT---GGAGTGCAAAGTGGCT...	20	1	2.00	2	0	0	2	0	0
...................................GTGAAGCTAAATTGGAGTC..............................................................................................................................................................................	19	1	2.00	2	0	1	0	1	0
.............GCCGATGCTGATGTGGAGACAC.................................................................................................................................................................................................	22	1	2.00	2	0	0	0	2	0
..............CCGATGCTGATGTGGAGACAC.................................................................................................................................................................................................	21	1	2.00	2	0	0	0	2	0
...........................................................................................................................................................................................CTGCCATCACCAAGCAATT---GG.................	21	1	2.00	2	0	2	0	0	0
...............................ACACGTGAAGCTAAATTGGAGTCA.............................................................................................................................................................................	24	1	2.00	2	0	0	1	1	0
........ATGATGCCGATGCTGATGTGGA......................................................................................................................................................................................................	22	1	2.00	2	0	0	0	2	0
............................GAGACACGTGAAGCTAAATTGGAGTC..............................................................................................................................................................................	26	1	2.00	2	0	0	2	0	0
......TGATGATGCCGATGCTGATGTG........................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0
..................................CGTGAAGCTAAATTGGAGTC..............................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0
......................................................................................................................................................................................................AAGCAATT---GGAGTGCAAAGTGGCT...	24	1	1.00	1	0	0	1	0	0
..............................................................................................................................................................................................CCATCACCAAGCAATT---GGAGT..............	21	1	1.00	1	0	1	0	0	0
...............CGATGCTGATGTGGAGACACGTGAAGC..........................................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0
...........................................................GTAAGTGTA------------TTACA----------AAG---GC-------AA....................................................................................................................	21	1	1.00	1	0	0	0	1	0
................GATGCTGATGTGGAGACACGTGAAGCTA........................................................................................................................................................................................	28	1	1.00	1	0	0	1	0	0
..........................TGGAGACACGTGAAGCTAAATT....................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0
................GATGCTGATGTGGAGACA..................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
............TGCCGATGCTGATGTGGAGA....................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0
...........................................................................................................................................................................................CTGCCATCACCAAGCAATT---GGAG...............	23	1	1.00	1	0	0	0	1	0
...................................................................................................................................................................................................ACCAAGCAATT---GGAGTGCAAAGTGGCT...	27	1	1.00	1	0	0	1	0	0
............................................................................................................................................................................................TGCCATCACCAAGCAATT---G..................	19	1	1.00	1	0	0	0	1	0
.........................................................................................................................................................................................TGCTGCCATCACCAAGCAATT---GG.................	23	1	1.00	1	0	1	0	0	0
.........TGATGCCGATGCTGATGTGGAGACAC.................................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0
..........GATGCCGATGCTGATGTGGAGACACG................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0
...............CGATGCTGATGTGGAGACACGT...............................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0
...................GCTGATGTGGAGACACGTGAAG...........................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0
..............................GACACGTGAAGCTAAATTGGAGTCAC............................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0
.....TTGATGATGCCGATGCTGATGT.........................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0
.........TGATGCCGATGCTGATGTGGAGAC...................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1
.........................................................................................................................................................................................................CAATT---GGAGTGCAAAGTGGCT...	21	1	1.00	1	0	0	1	0	0
..........GATGCCGATGCTGATGTGGAGACA..................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0
............................GAGACACGTGAAGCTAAATTGGAGT...............................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0
...........................................................................................................................................................................................................ATT---GGAGTGCAAAGTGGC....	18	1	1.00	1	0	0	0	1	0
............................................................................................................................................................................................TGCCATCACCAAGCAATT---GG.................	20	1	1.00	1	0	1	0	0	0
.............................................................................................................................GTACTAA---------------CT--GA------------TTCATTGCAG.....................................................	21	1	1.00	1	0	0	0	1	0
....TTTGATGATGCCGATGCTGATGTGGA......................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0
.......GATGATGCCGATGCTGATGTGGAGACA..................................................................................................................................................................................................	27	1	1.00	1	0	0	0	1	0
.ACCTTTGATGATGCCGATGCTGATGT.........................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0
................GATGCTGATGTGGAGACACGTG..............................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0
................GATGCTGATGTGGAGACACGTGAAGC..........................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0
...............CGATGCTGATGTGGAGACA..................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0
..................................................................................................................................................................................................CACCAAGCAATT---GGAGTGCAAAGTGGC....	27	1	1.00	1	0	0	1	0	0
............................GAGACACGTGAAGCTAAAT.....................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0
................GATGCTGATGTGGAGACACGTGAAGCT.........................................................................................................................................................................................	27	1	1.00	1	0	0	0	1	0
......................GATGTGGAGACACGTGAAGCTAAA......................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0
......................................................................................................................................................................................................AAGCAATT---GGAGTGCAAAGTGGC....	23	1	1.00	1	0	1	0	0	0
................................................................................................................................................................................................ATCACCAAGCAATT---GGAGT..............	19	1	1.00	1	0	0	0	1	0
......................................................................................................................................................................................TATTGCTGCCATCACCAAGCA.........................	21	1	1.00	1	0	1	0	0	0
............................................................................................................................................................................................TGCCATCACCAAGCAATT---GGA................	21	1	1.00	1	0	1	0	0	0
..............................GACACGTGAAGCTAAATT....................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
..........................................................................................................................................................................................GCTGCCATCACCAAGCAATT---GG.................	22	1	1.00	1	0	1	0	0	0
......................GATGTGGAGACACGTGAAGCTA........................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0
..................................CGTGAAGCTAAATTGGAGT...............................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0
.......GATGATGCCGATGCTGATGTGGAGAC...................................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0
.........TGATGCCGATGCTGATGTGGAGACACG................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	1
............TGCCGATGCTGATGTGGA......................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0
.....TTGATGATGCCGATGCTGA............................................................................................................................................................................................................	19	1	1.00	1	0	0	0	1	0
.................ATGCTGATGTGGAGACACGTGAAG...........................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0
...............................ACACGTGAAGCTAAATTGGA.................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0
........ATGATGCCGATGCTGATGTGGAGACAC.................................................................................................................................................................................................	27	1	1.00	1	0	0	0	1	0
.............GCCGATGCTGATGTGGAGA....................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0
..............CCGATGCTGATGTGGAGACACGT...............................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0
........ATGATGCCGATGCTGATGTGGAGAC...................................................................................................................................................................................................	25	1	1.00	1	0	0	0	1	0
...........................................................GTAAGTGTA------------TTACA----------AAG---GC-------AAATGCA...............................................................................................................	26	1	1.00	1	0	0	0	1	0
........ATGATGCCGATGCTGATGT.........................................................................................................................................................................................................	19	2	0.50	1	0	0	0	1	0
.......GATGATGCCGATGCTGATGT.........................................................................................................................................................................................................	20	2	0.50	1	0	0	0	1	0
......TGATGATGCCGATGCTGATGT.........................................................................................................................................................................................................	21	2	0.50	1	0	0	0	1	0
...................................GTGAAGCTAAATTGGAGG...............................................................................................................................................................................	18	2	0.50	1	0	0	0	1	0
..........................................TAAATTGGAGTCACATGA........................................................................................................................................................................	18	2	0.50	1	0	0	0	1	0
.........TGATGCCGATGCTGATGT.........................................................................................................................................................................................................	18	2	0.50	1	0	0	1	0	0
.......GATGATGCCGATGCTGAT...........................................................................................................................................................................................................	18	4	0.25	1	1	0	0	0	0

droVir3

TTCCTTTGAGGATGTGTC---------CGAGACACGTGCTGCTACGCTCCAGTCACATGGTACGCCCTGACA-------------GCCACTAACTCATGC------------ATATATG----TAG-GCTAATT--------GATA-TT--TAC-----CT----TATTGAACAGACTCCGCGATTGCCGCTATCAGCAAGCAATTGAACGGCTGCAAGGTGGCTTAT	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
..........................................................................................................................................................................................................AATTGAACGGCTGCAAGGT.......	19	1	12.00	12	0	0	5	1	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0
...........................................................................................................................................................................................................ATTGAACGGCTGCAAGGT.......	18	1	6.00	6	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................GCAATTGAACGGCTGCAAGGT.......	21	1	3.00	3	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..........................................................................................................................................................................................................AATTGAACGGCTGCAAGGC.......	19	1	2.00	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
.................................................................................................................................................................................TCCGCGATTGCCGCTATCAGCAAGC..........................	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................AAGCAATTGAACGGCTGCAAGGTGGCT...	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............GTC---------CGAGACACGTGCTGCT.........................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................AAGCAATTGAACGGCTGCA...........	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............GTC---------CGAGACACGTGCTGCTACGCT....................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................ATTGAACGGCTGCAAGGTGG.....	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................GACACGTGCTGCTACGCTCCAGTCACA...........................................................................................................................................................................	27	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................ATTGCCGCTATCAGCAAGC..........................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............GTC---------CGAGACACGTGCTGCTA........................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................CGTGCTGCTACGCTCCAGT...............................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................AGCAATTGAACGGCTGCAAGGT.......	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............GTC---------CGAGACACGTGCTGCTACGCTC...................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........ATGTGTC---------CGAGACACGTGCT............................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................CAATTGAACGGCTGCAAGGT.......	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................GAGACACGTGCTGCTACGCTCCA.................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................GCTATCAGCAAGCAATTGAACGGCT..............	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................TTGAACGGCTGCAAGGTGGC....	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............TGTC---------CGAGACACGTGCTGCTACGCTC...................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......TGAGGATGTGTC---------CGAGACACGTGCT............................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.............................................................................................................................................................................................GCTATCAGCAAGCAATTGAACGGCTGC............	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................GACTCCGCGATTGCCGCTATCA................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................CTACGCTCCAGTCACATG.........................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................GAGACACGTGCTGCTACGCTC...................................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................CGAGACACGTGCTGCTACG......................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
................................CACGTGCTGCTACGCTCCAGTCACATTA........................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................CGAGACACGTGCTGCTACGCTCC..................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................CAAGCAATTGAACGGCTGC............	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................TGCTGCTACGCTCCAGTCACATGA........................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................CCGCTATCAGCAAGCAATTGAACGGCT..............	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............TGTC---------CGAGACACGTGCTGCTACGCTCC..................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............TGTC---------CGAGACACGTGCTGCTACGCT....................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............GTC---------CGAGACACGTGCTGCTACGCTCC..................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................CACGTGCTGCTACGCTCCAGTC..............................................................................................................................................................................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..CCTTTGAGGATGTGTC---------CGA......................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......TGAGGATGTGTC---------CGAGACACGTGCTGCT.........................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................CTATCAGCAAGCAATTGAACGGCTGCA...........	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................GACACGTGCTGCTACGCTCCA.................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................CAATTGAACGGCTGCAAGGTG......	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................GAGACACGTGCTGCTACGC.....................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................CCGCGATTGCCGCTATCAGCAAGCA.........................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................ACGTGCTGCTACGCTCCAGT...............................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................CGTGCTGCTACGCTCCAGTCACATGAC.......................................................................................................................................................................	27	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................CTATCAGCAAGCAATTGAACGGCT..............	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....TTGAGGATGTGTC---------CGAGAC...................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............GTC---------CGAGACACGTGCTGC..........................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0

droMoj3

TTCCTTTGAGAATGTGGA---------AGAGACACGTGCCGCAACGCTCCAGTCACATGGTGAGCTTCA----------------------------------CTCAATGAGAGTTGTC-----------CATTCAATTGATTAATTCTTATCGTGAAT-ATTACCTGTAAACAGACGCTGCCATTGCTGCCATCAGTCAGCAATT---GAAGTGCAAGGTTGCCTAT	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.TCCTTTGAGAATGTGGA---------AGA......................................................................................................................................................................................................	20	1	2.00	2	1	0	0	0	0	1
................GA---------AGAGACACGTGCCGCAACGCTCCAGT...............................................................................................................................................................................	28	1	2.00	2	0	0	0	0	0	2
..............................GACACGTGCCGCAACGCTCCAGT...............................................................................................................................................................................	23	1	2.00	2	2	0	0	0	0	0
...........................................................................................................................................................................................CTGCCATCAGTCAGCAATT---G..................	20	1	1.00	1	1	0	0	0	0	0
...........ATGTGGA---------AGAGACACGTGCC............................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
...........................................................GTGAGCTTCA----------------------------------CTCAATGAG....................................................................................................................	19	1	1.00	1	0	0	0	0	0	1
...................................................................................................................................................................................................AGTCAGCAATT---GAAGTGCAAGG........	22	1	1.00	1	1	0	0	0	0	0
.......GAGAATGTGGA---------AGAGACA..................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
..........AATGTGGA---------AGAGACACGTGCCG...........................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
......TGAGAATGTGGA---------AGAGACACGT...............................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1
.......................................CGCAACGCTCCAGTCACATGAC.......................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
...........ATGTGGA---------AGAGACACGTGCCG...........................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1
...............................ACACGTGCCGCAACGCTCCA.................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
...............GGA---------AGAGACACGTGCCGCA.........................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
.........GAATGTGGA---------AGAGACACGTG..............................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
...........................AGAGACACGTGCCGCAACGCTCCAGT...............................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	1
............TGTGGA---------AGAGACACGTGCCGC..........................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
TTCCTTTGAGAATGTGGA---------AGA......................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................GTCAGCAATT---GAAGTGCAAGGTTGCCT..	27	1	1.00	1	0	0	0	1	0	0
..CCTTTGAGAATGTGGA---------AGA......................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
...........................AGAGACACGTGCCGCAACGCTCCAGTCA.............................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................ATCAGTCAGCAATT---GAAGT..............	19	1	1.00	1	1	0	0	0	0	0
.........GAATGTGGA---------AGAGACACGTGCC............................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................AATT---GAAGTGCAAGGTTGCCTA.	22	1	1.00	1	0	0	0	0	0	1
............................................................................................................................................................................................TGCCATCAGTCAGCAATT---GAAGT..............	23	1	1.00	1	1	0	0	0	0	0

droGri2

TAATTT-------------------------------------------------------------------------------------------------------------------------------------GATAAAAATG--TAT-----CT----TTTATAATAGATTCGGCTATTGCTGCTGTTAGCAAGCAGTT---GGACTGCAAGGTGGCTTAT	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dsi_6170

2r:5898906-5898978 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads