ID:

dsi_6084

 Coordinate:

2l:111705-111854 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-2.4 -2.3

Flybase annnotation

CDS [2l_111855_111972_-]; exon [2l_111855_111972_-]; intron [2l_111005_111854_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CCATCGGGTGCTGGCAAGAGTACGCTGCTCAACATTTTGTCTGGCTACAAGTAGGTTTCGCAGGGCCTGATTATTTGCATTCACGTCAAGTAGCTGCTGATTCCGACACTGAACGTATCTGACCTTGCGCCAGCGCACGAGAATACGGCGAAACGAGTTCGGAAATGTTTATATTCAGCCCTGTATTATCATCAGAAATAATTGCGACTTGATAACCACTCTGCCGCTTTTGGTGCTTAAACAGCCGACC
******************************************************************************....((((..(((................)))..))))...........*************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 M025
embryo
 M024
male body		 SRR618934
dsim w501 ovaries
 M053
female body
 SRR553486
Makindu_3 day-old ovaries
..............................................................................ATTCACGTCAAGTAGCTG.......................................................................................................................................................... 18 0 1 4.00 4 4 0 0 0 0 0
...................................TTTGTCTGGCTACAAGTAGGT.................................................................................................................................................................................................. 21 0 1 2.00 2 0 0 2 0 0 0
....................................................................................................................................................................................................AATAATTGCGACTTGATAACCACTCT............................ 26 0 1 2.00 2 0 2 0 0 0 0
.................................ATTTTGTCTGGCTACAAA....................................................................................................................................................................................................... 18 1 1 2.00 2 1 0 0 0 1 0
.............................CAACATTTTGTCTGGCTACA......................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0
...........................CTCAACATTTTGTCTGGC............................................................................................................................................................................................................. 18 0 1 1.00 1 0 0 1 0 0 0
.........GCTGGCAAGAGTACGCTGCT............................................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 0 0 1 0
.........GCTGGCAAGAGTACGCTGCTC............................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0
..............................AACATTTTGTCTGGCTAC.......................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0
.............................................................................................CTGCTGATTCCGACACTGAACG....................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
...................GTACGCTGCTCAACATTTTGT.................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0
..ATCGGGTGCTGGCAAGAGGACGCT................................................................................................................................................................................................................................ 24 1 1 1.00 1 0 0 1 0 0 0
...............................................................................................GCTGATTCCGACACTGAACG....................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................AGCTGCTGATTCCGACACTGAACG....................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
............................TCAACATTTTGTCTGGCT............................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 1 0 0 0
..ATCGGGTGCTGGCAAGAGTACGCT................................................................................................................................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0
.......................GCTGCTCAACATTTTGTCT................................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 1 0 0
..........................................................................................................CACTGAACGTATCTGACCTTG........................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
.................................................................................CACGTCAAGTAGCTGCTGATT.................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
.........................TGCTCAACATTTTGTCTGGCC............................................................................................................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
.............................CAACATTTTGTCTGGCTAA.......................................................................................................................................................................................................... 19 1 2 0.50 1 0 0 1 0 0 0
.......................................................................TGTTTGCATTCACGTCCCGT............................................................................................................................................................... 20 3 9 0.22 2 0 0 0 0 0 2
...................................................................................................................................................................AATGGTTATATTCCGCCC..................................................................... 18 2 5 0.20 1 1 0 0 0 0 0
...........................................................................TGCATTCGCGTCGAGTA.............................................................................................................................................................. 17 2 16 0.06 1 0 0 0 1 0 0

Anti-sense strand reads

GGTAGCCCACGACCGTTCTCATGCGACGAGTTGTAAAACAGACCGATGTTCATCCAAAGCGTCCCGGACTAATAAACGTAAGTGCAGTTCATCGACGACTAAGGCTGTGACTTGCATAGACTGGAACGCGGTCGCGTGCTCTTATGCCGCTTTGCTCAAGCCTTTACAAATATAAGTCGGGACATAATAGTAGTCTTTATTAACGCTGAACTATTGGTGAGACGGCGAAAACCACGAATTTGTCGGCTGG
***************************************************************************************************************************....((((..(((................)))..))))...........****************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M023
head
 SRR618934
dsim w501 ovaries
 M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
........................GACGAGTTGTAAAACAGACCGA............................................................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0
.....................................................................................AGTTCATCGACGACTAAGGCT................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
.....CCCACGACCGTTCTCATGC.................................................................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0
........................................................................................TCATCGACGACTAAGGCTGTGACT.......................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0
................TCTCAGGCGACGAGATG......................................................................................................................................................................................................................... 17 2 10 0.40 4 0 1 0 1 2 0
........................GACGAGTTGTAAAAC................................................................................................................................................................................................................... 15 0 3 0.33 1 0 1 0 0 0 0
.......................................AGTCCGATGTTCATC.................................................................................................................................................................................................... 15 1 3 0.33 1 0 0 0 1 0 0
.............CGTTTTCAGGCGACGAGATG......................................................................................................................................................................................................................... 20 3 8 0.13 1 0 0 0 0 1 0
....................................AACCGACTGATGTTCAT..................................................................................................................................................................................................... 17 2 15 0.07 1 0 0 0 0 1 0
.........................................................................................................................................................................................................AACGCTGAACTATGTTTGA.............................. 19 3 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:111655-111904 - dsi_6084 CCATCGGGTGCTGGCAAGAGTACGCTGCTCAACATTTTGTCTGGCTACAAGTAGGTTTCGCAG-------------------GGC-CTGATTATTTGCATTCACGTCAAG-TAG--------------CT--------G---CTGAT---T--------CCGA---CACT---G---AAC-----------------------------------------------GT--ATCTGACCTTGCGCCA-----------G-------CGCA-CGAGAAT--ACGGCGAAACG-------------------AGTTC------GG------AAA--T--GTT--TATA---TTCAGCCCTGTATTATCATCAG----------A-AATAATTGCGACTTGATAACC----------------------------ACTCTGCCGCTTTTGGTGCTTAAACAGCCGACC
droSec2 scaffold_14:124817-125066 - CCATCGGGTGCTGGCAAGAGTACGCTGCTCAACATTTTGTCTGGCTACAAGTAGGTTTCGCAG-------------------GGC-CTGATTATTTGCATTCACGTCAAG-TAG--------------CT--------G---CTGAT---T--------CCGA---CACT---G---AAC-----------------------------------------------GT--ATCTGACCTTGCGCCA-----------G-------CGCA-CGAGAAT--ACGGCGAAACG-------------------AGTTC------GG------AAA--T--GTT--TATA---TTCAGCCCTGTATTATCATCAG----------A-AATAATTGCGACTTGATAACC----------------------------ATTCTGCCGCTTTTGGTGCTTAAACAGCCGACC
dm3 chr2L:125914-126159 - CCATCGGGTGCTGGCAAGAGTACGCTGCTCAACATTTTGTCTGGCTACAAGTAGGTTTCGCAG-------------------GGC-CTGATTATTTGCATTCACGTCAAG-TAG--------------CT--------G---CTGAT---T--------CCGA---CACT---G------------------------------------------------------A--ATCTGACCTTGCGCCA-----------G-------CGCA-CGAGAAT--ACGGCGAAACG-------------------AGTTC------GA------AAA--T--GTT--TATA---TTCAGCCCTGTATTATCATCAG----------A-AATAATTGCGACTTGATAACC----------------------------ACTCTGCCGCTTTTGGTGCTTAAACAGCCGACC
droEre2 scaffold_4929:155529-155778 - CCATCGGGTGCTGGCAAGAGTACGCTGCTCAACATTTTGTCTGGCTACAAGTAGGTTTCGCAG-------------------GGC-CTGATTATTTGCATTCATGTCAAG-TAG--------------CT--------G---CTGAT---T--------CCGA---CACT---G---AAC-----------------------------------------------GT--ATCTGACCTTGCGCCA-----------G-------CACA-CGAGAAT--ACGGCGAAACG-------------------AGTTC------GA------AAA--T--GTT--TATA---TTCAGCCCTGTATTATCATCAG----------C-AATAATTGCGACTTGATAACC----------------------------ACTCTGCCGCTTTAAGTGCTTAAACAGCCGACC
droYak3 2L:114918-115167 - CCATCGGGCGCTGGCAAGAGTACGCTGCTCAACATTTTGTCTGGCTACAAGTAGGTTTCGCAG-------------------GGC-CTGATTATTTGCATTCACATCAAG-TAG--------------CT--------G---CTGAC---T--------CCGA---CACT---G---AAC-----------------------------------------------GT--ATCTGACCTTGCGCCG-----------G-------CACA-CGAGAAT--ACGGCGAACCG-------------------AGTTC------GA------AAC--T--GTT--TATA---TTCAGCCCTGTATTATCATCAG----------A-AATAATTGCGACTTGATAACC----------------------------ACTTTGCCGCTTTTGGTGCTTAAACAGCCGACC
droEug1 scf7180000409154:116806-117060 - CCATCGGGCGCTGGCAAGAGTACGCTTCTCAACATTTTGTCGGGCTACAAGTAAGTTTGGTAG-------------------GACCCTGATAATTTGCATTCACATTAAG-TAG--------------CT--------G---CTG---------AA-ATGCGAA-TCACC---G---AACGTAC-------A------TATAATACAT--------------------T--ATATGACCTTAAGCT----------------------GA-GTAGAAT--ACGGCAATACA-------------------AGTGC------GA------GTA--T--GTT--T---------------TTATTATCAACAA----------A-AATAATTCCGACTTGATAAGCG---GCAA-------------AAGAGCCAGTTTA---------GCGCTTGAATCTTTAACC
droBia1 scf7180000301547:149000-149251 + CCGTCGGGCGCTGGCAAGAGTACGCTGCTCAACATTTTGTCCGGCTACAAGTAAGTTGGGCTG-------------------GGC-CTGATAATTCGCATTCACATCAAG-TAG--------------CT--------G---CT---------AAA-ATCCGAA-TCCCC---G----TC-----------------------------------------------GA--ATCTGACCTTGCGCCA-----------G-------CACA-CGAGAAT--GCGGCGAAACG-------------------AGTGA------GA------GTG--T--GTT--CATA---ACCAGCCCTGTATTATCAACAG----------T-AATAATAGCGACTTGATAAGC----------------------------TCTCTGCCTCCCTTGGCGCTTGAACCGCCGACC
droTak1 scf7180000413017:435413-435675 + CCGTCGGGCGCTGGCAAGAGTACGCTGCTCAACATTTTGTCCGGCTACAAGTAAGTTTCGCCC-----------GGTGGTGGGGC-CTGATAATTTGCATTCACTTCAAG-TAG--------------CT--------G---CT---------AAA-ATCCGAA-TCACC---G---AAC-----------------------------------------------CC--ATCTGACCTTGCGCC------------G-------CACA-CGAGAAT--ACGGCGAAACG-------------------AGTGC------GA------GTG--T--GTT--TATA---GCCAGCCCTGTACTATCAACAGTAA-------T-AATAATGGCGACTTGATAAGC----------------------------ACTCTGCCTCTTTCGGCGCTTGAACCGCCGACC
droEle1 scf7180000490216:42631-42889 - CCATCGGGCGCTGGCAAGAGTACGCTGCTCAACATTTTGTCCGGCTACAAGTAAGTTT------------------------------GTACATTTGCATTCACTTCAAG-TGT--------------CT--------G---CTGAAGCTGCTGGA-ACCCGCA-TCACC---G------------------------------------------------------A--ATCTGACCTTGAGACG-----------G-------CACA-CGAGAAT--ACGGCAAAACG-------------------AGTGC------GAGAGCGAGTATATGTATT--TAT--TAGCCAGCCCTGTATTATCAACAA----------A-AATAAGTGCGACTTGATAAGC----------------------------ACTCTGCCTCTTTCGGAGCTTGAACCGCCGACC
droRho1 scf7180000779252:133834-134069 - CCATCAGGCGCTGGCAAGAGTACGCTGCTCAATATTTTGTCCGGCTACAAGTAAGTTTAACTG-------------------GGC-CTGATAATTTGCATTCACCTCAAG--AG--------------AT--------T---CT---------GAA-ATTCGAA-TCACC---A------------------------------------------------------A--ATCTGACCTTGGGA------------------------------------CGGCACAACG-------------------AGTGC------GA------GTGCAT--GTATTTAT--TAGCTAGCGC--TATTATCAACAG----------A-AATAATTGCGACTTGATAAGC----------------------------ACTCTGCCTCTTTCGGAGCTTGAACCGCCGACC
droFic1 scf7180000453904:1425043-1425315 - CCATCGGGCGCTGGCAAGAGCACGCTGCTCAACATTTTGTCCGGCTACAAGTAAGTTTGGCTG-------------------GGC-CTGATAATTTGCATTCACATCAAG-TAA--------------CA--------G---TCGAA---G---------------CGGC---G---AAC-----------------------------------------------CG--ATTTGACCTTGCGCCG-----------A-------CGCA-AGGGAAC--ACGGCAAAACGGGA-----GCGCGAGTGCGAGTGCGATGGCGAGTGCGAGTC--C--ATT--TAT--TAGCCAGCCCTGTATTATCAGCAG----------A-AATTATTGCGACTTGATAAGC----------------------------ACTCCGCCTCTTTCGGAGCTTGAACCGACGACC
droKik1 scf7180000302570:989044-989360 - CCATCGGGCGCTGGCAAGAGTACCCTGCTCAATATTTTGTCTGGCTACAAGTGAGTTTTCTTT-----GCTTCC---------AA-CTGATAATTTGCATGCACAACAAGGTAGGGG-TAC-GCGTAGTA--------G---CT---------GGA-ATTCGAA-ACATCGCCGCCGCACGCACACTCTGAAAACATATATAATA-ATAATAAAAAACAAAAAAAACTC--AGCTGACCTTGGGG--------------------------CCAGAAT--ATGGCGAATCG-------------------AGTGC------GG------GTA--C--AAT--TATATTAGCCAGCCGCTTATTATCAACAG----------AAAATAATTGTGACTTGATAAGC----------------------------AGTCTCTCTCTCTC---TCTTGAACCGCCGACC
droAna3 scaffold_12916:1983113-1983407 + CCGTCCGGCGCTGGCAAGAGCACGCTGCTCAACATTTTGTCCGGCTACAAGTGAGTAG--AAG------AGACC---------GA-CTCGTCATTTGCATTCAGACCGTG-TAGAAGCTACTGCCCAGAAGCGAGTCCGATTC----------------ACAAT-TCGCC---G---AAC-----------------------------------------------GC--ACCTGACCTTGTGCCAGCTGCCA-------------GCC-AGCGAGT--GCGGCCAGCGG---------------------------------------AA--T--GTT--ATTA---GCGAGCCCTGTATTATCAACAG----------A-AATAATTGCGCCTTGATAAGCATGAACTAACGACCCTTTCACGGT----CGCCTGTCGTCGCCGGTGCCTGTGCCTGTGCCT
droBip1 scf7180000396728:636908-637162 + CCATCCGGCGCTGGCAAGAGCACGCTGCTCAACATTTTGTCCGGCTACAAGTGAGTA-----G-------------------AGT-CTCGTCATTTGCATTCACACCATG-TAGGAGCCACT---CAGAAGCGAGTCCGAATCTGAA---T--------CCGAATTCGAT---G---AAC-----------------------------------------------GC--ACCTGACCTTGTC--AG-TGCCAGCCAGCACTCTCCGCACCGGGAGT--ACGGCGGA-------------------------------------------A--T--GTT--ATTA---GCAAGCCCTGTATTATCAACAG----------A-AATAATTGCGCCTTGATAA-----------------------------------------------GCTTGAACTAACGACC
dp5 4_group2:149541-149849 - CCATCCGGCGCTGGCAAGAGTACGCTCCTGAATATTTTGTCTGGCTACAAGTAAGTTTGGCTTTGTCTGATGCCG-------ATG-ATGATAATTTGCATTCACAACGAG-TAG--------------CT--------G---GT---------ACATAT---------T--------------T-------TCGCATGTG---TGTAT-----------------GTGTGTTGATGACCTTGTGGAA-----------A-------TACA-CCAGAATGTACGGCACACGGTGCCTGTTGCGC-CGTACTAGTGC------TAGTGCGAGTA--T--ATT--TATA--AGCCCGCCCTGTATTATCAGCATTACTATAAAGA-AATATGTACGACTTGATAAGT----------------------------ACACTGCCTCTCAGAGAGCTTGAACCGCCGACC
droPer2 scaffold_8:3739451-3739759 + CCATCCGGCGCTGGCAAGAGTACGCTCCTGAATATTTTGTCTGGCTACAAGTAAGTTTGGCTTTGTCTGATGCCG-------ATG-ATGATAATTTGCATTCACAACGAG-TAG--------------CT--------G---GT---------ACATAT---------T--------------T-------TCGCATGTG---TGTAT-----------------GTGTGTTTATGACCTTGTGGAA-----------A-------TACA-CCAGAATGTACGGCACACGGTGCCTGTTGCGC-CGTACTAGTGC------TAGTGCGAGTA--T--ATT--TATA--AGCCCGCCCTGTATTATCAGCATTACTATAAAGA-AATATGTACGACTTGATAAGT----------------------------ACACTGCCTCTCAGAGAGCTTGAACCGCCGACC
droWil2 scf2_1100000004585:1849007-1849191 - CCATCGGGAGCTGGCAAATCTACTTTGCTCAACATTTTGTCTGGCTACAAGTAAGTCTGGAAC----TAAATTCA-------ATC-TTGATAATTTGCATTCAACACGAG-TAA--------------TC--------A---TC---------TAATAT---------A--------------C-------ATACATATA---TACAT-----------------AAGT--ATTTGACCTTGTGCGA-----------A-------A----------------------------------------------------------------T--T--GTC--TATA---TA-------------TGTACAA----------A-TATATGTGGAA-------------------------------ATGAG-----------------------------------
droVir3 scaffold_13246:253550-253606 - CCATCCGGCGCTGGAAAGAGTACATTGCTCAACATTTTGTCGGGCTACAAGTGAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:246844-246899 - CCATCAGGTGCTGGCAAGAGCACATTACTGAACATTTTGTCGGGCTACAAGTGAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15252:17034870-17034925 + CCATCGGGGGCTGGAAAGAGTACTTTACTCAATATTTTGTCGGGCTATAAGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CCATCGGGTGCTGGCAAGAGTACGCTGCTCAACATTTTGTCTGGCTACAAGTAGGTTTCGCAG-------------------GGC-CTGATTATTTGCATTCACGTCAAG-TAG--------------CT--------G---CTGAT---T--------CCGA---CACT---G---AAC-----------------------------------------------GT--ATCTGACCTTGCGCCA-----------G-------CGCA-CGAGAAT--ACGGCGAAACG-------------------AGTTC------GG------AAA--T--GTT--TATA---TTCAGCCCTGTATTATCATCAG----------A-AATAATTGCGACTTGATAACC----------------------------ACTCTGCCGCTTTTGGTGCTTAAACAGCCGACCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................ATTCACGTCAAG-TAG--------------CT--------G---...................................................................................................................................................................................................................................................................................................................................1814.00440000000000000000
...................................TTTGTCTGGCTACAAGTAGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................2112.00202000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................AATAATTGCGACTTGATAACC----------------------------ACTCT............................2612.00200200000000000000
.................................ATTTTGTCTGGCTACAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................1812.00210010000000000000
.............................CAACATTTTGTCTGGCTACA................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
...........................CTCAACATTTTGTCTGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
.........GCTGGCAAGAGTACGCTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
.........GCTGGCAAGAGTACGCTGCTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
..............................AACATTTTGTCTGGCTAC.................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
................................................................................................................................CT--------G---CTGAT---T--------CCGA---CACT---G---AAC-----------------------------------------------G.............................................................................................................................................................................................................................................2211.00110000000000000000
...................GTACGCTGCTCAACATTTTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
..........................................................................................................................................G---CTGAT---T--------CCGA---CACT---G---AAC-----------------------------------------------G.............................................................................................................................................................................................................................................2011.00110000000000000000
................................................................................................................AG--------------CT--------G---CTGAT---T--------CCGA---CACT---G---AAC-----------------------------------------------G.............................................................................................................................................................................................................................................2411.00110000000000000000
............................TCAACATTTTGTCTGGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
..ATCGGGTGCTGGCAAGAGTACGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100000000000000
.......................GCTGCTCAACATTTTGTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
......................................................................................................................................................................CACT---G---AAC-----------------------------------------------GT--ATCTGACCTTG...............................................................................................................................................................................................................................2111.00110000000000000000
.....................................................................................................CACGTCAAG-TAG--------------CT--------G---CTGAT---T--------..................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.........................TGCTCAACATTTTGTCTGGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000000000000000
.............................CAACATTTTGTCTGGCTAA.................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50101000000000000000
droSec2
CCATCGGGTGCTGGCAAGAGTACGCTGCTCAACATTTTGTCTGGCTACAAGTAGGTTTCGCAG-------------------GGC-CTGATTATTTGCATTCACGTCAAG-TAG--------------CT--------G---CTGAT---T--------CCGA---CACT---G---AAC-----------------------------------------------GT--ATCTGACCTTGCGCCA-----------G-------CGCA-CGAGAAT--ACGGCGAAACG-------------------AGTTC------GG------AAA--T--GTT--TATA---TTCAGCCCTGTATTATCATCAG----------A-AATAATTGCGACTTGATAACC----------------------------ATTCTGCCGCTTTTGGTGCTTAAACAGCCGACCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........CTGGCAAGAGTACGCTGCTCAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
.........GCTGGCAAGAGTACGCTGCTCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
...TCGGGTGCTGGCAAGAGTAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001
dm3
CCATCGGGTGCTGGCAAGAGTACGCTGCTCAACATTTTGTCTGGCTACAAGTAGGTTTCGCAG-------------------GGC-CTGATTATTTGCATTCACGTCAAG-TAG--------------CT--------G---CTGAT---T--------CCGA---CACT---G------------------------------------------------------A--ATCTGACCTTGCGCCA-----------G-------CGCA-CGAGAAT--ACGGCGAAACG-------------------AGTTC------GA------AAA--T--GTT--TATA---TTCAGCCCTGTATTATCATCAG----------A-AATAATTGCGACTTGATAACC----------------------------ACTCTGCCGCTTTTGGTGCTTAAACAGCCGACCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..ATCGGGTGCTGGCAAGAGTAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000
..ATCGGGTGCTGGCAAGAGTACGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2416.0060000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.CATCGGGTGCTGGCAAGAGTACGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................TACGCTGCTCAACATTTTGTCTGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATCGGGTGCTGGCAAGAGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
......GGTGCTGGCAAGAGTACGCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000002000000000
..ATCGGGTGCTGGCAAGAGTACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001100000000000
CCATCGGGTGCTGGCAAGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..ATCGGGTGCTGGCAAGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000
.............................................................................................TTTGCATTCACGTCAAG-TAG--------------C................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
..........................GCTCAACATTTTGTCTGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................AT---T--------CCGA---CACT---G------------------------------------------------------A--ATCTGACC..................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CATCGGGTGCTGGCAAGAGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........GCTGGCAAGAGTACGCTGCTCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
..........................GCTCAACATTTTGTCTGGCTACAAAAC............................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CAACATTTTGTCTGGCTACAA...............................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CATCGGGTGCTGGCAAGAGTACGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................TGCTCAACATTTTGTCTGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.CATCGGGTGCTGGCAAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000
......................................................GTTTCGCAG-------------------GGC-CTGATTATT..................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CTGCTCAACATTTTGTCTGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GCTGGCAAGAGTACGCTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..................AGTACGCTGCTCAACATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GGTGCTGGCAAGAGTACGCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.............................................................................................................................................................................................................................................................................................GAAACG-------------------AGTTC------GA------AAA--T--GTT--T..........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................AAG-TAG--------------CT--------G---CTGAT---T--------CCGA---CACT---G------------------------------------------------------.............................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............CAAGAGTACGCTGCTCAACATTTTG..........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CATCGGGTGCTGGCAAGAGTACGCTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GGGTGCTGGCAAGAGTACGCTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TGCTGGCAAGAGTACGCTGCTCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TGCATTCACGTCAAG-TAG--------------CT--------G---...................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
................................................................................................GCATTCACGTCAAG-TAG--------------CT--------G---...................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.........................TGCTCAACATTTTGTCTGGCTACAAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................ACG-------------------AGTTC------GA------AAA--T--GTT--TATA---TTCAGC..............................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................GTAGGTTTCGCAG-------------------GGC-CTG........................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TCGGGTGCTGGCAAGAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
...TCGGGTGCTGGCAAGAGTACGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................ACATTTTGTCTGGCTACAAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
........TGCTGGCAAGAGTACGCTGCTCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................ATTTTGTCTGGCTACAAGTAG...........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TGCTGGCAAGAGTACGCTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.CATCGGGTGCTGGCAAGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..........CTGGCAAGAGTACGCTGCTCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TGACCTTGCGCCA-----------G-------CGCA-CGA...............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................ACC----------------------------ACTCTGCCGCTTTTGGTGCTTAAACA.......2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TCGGGTGCTGGCAAGAGTACGCTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................G-TAG--------------CT--------G---CTGAT---T--------CCGA---CACT---....................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CC----------------------------ACTCTGCCGCTTTTGGTGC..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTAGGTTTCGCAG-------------------GGC-CTGATTATTTGCA..............................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................T--ACGGCGAAACG-------------------AGTTC------GA------AAA--T--GTT--...........................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TGGCTACAAGTAGGTTTCGCA...................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...TCGGGTGCTGGCAAGAGTACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................ACTTGATAACC----------------------------ACTCTGCCGC.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GTGCTGGCAAGAGTACGCTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................CAAGTAGGTTTCGCAG-------------------GGC-CT.........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CGGGTGCTGGCAAGAGTACGCTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATCGGGTGCTGGCAAGAGTACGCTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....CGGGTGCTGGCAAGAGTACGCTGCTCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................CAACATTTTGTCTGGCTACA................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CATCGGGTGCTGGCAAGAGTACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TGCTCAACATTTTGTCTGGCTACAAAAC............................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................CTGGCTACAAGTAGGTTTCGC....................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................TTGCGCCA-----------G-------CGCA-CGAGAAT--ACGGCGAA.................................................................................................................................................................................2811.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CGGGTGCTGGCAAGAGTACGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TCTGGCTACAAGTAGGTTTCG.....................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
.......................................................TTTCGCAG-------------------GGC-CTGATTATTTGC...............................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GGGTGCTGGCAAGAGTACGCTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TCGGGTGCTGGCAAGAGTACGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................GCGACTTGATAACC----------------------------ACTCTGCCGC.......................2411.0010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TGCTGGCAAGAGTACGCTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CGGGTGCTGGCAAGAGTAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CGGGTGCTGGCAAGAGTACG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
..................................................................................................................................................................A---CACT---G------------------------------------------------------A--ATCTGACCTTGCGCCA-----------G-------CGC....................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.....................................................GGTTTCGCAG-------------------GGC-CTGAT......................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TCGGGTGCTGGCAAGAGTACGCTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CGGGTGCTGGCAAGAGTACGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................ATAATTGCGACTTGATAACC----------------------------A................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....CGGGTGCTGGCAAGAGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................ATCTGACCTTGCGCCA-----------G-------CGCA-..................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................T---T--------CCGA---CACT---G------------------------------------------------------A--ATCTGACCT.................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.................................ATTTTGTCTGGCTACAAAAC............................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CCATCGGGTGCTGGCAAGAGTACGCTGCTCAACATTTTGTCTGGCTACAAGTAGGTTTCGCAG-------------------GGC-CTGATTATTTGCATTCATGTCAAG-TAG--------------CT--------G---CTGAT---T--------CCGA---CACT---G---AAC-----------------------------------------------GT--ATCTGACCTTGCGCCA-----------G-------CACA-CGAGAAT--ACGGCGAAACG-------------------AGTTC------GA------AAA--T--GTT--TATA---TTCAGCCCTGTATTATCATCAG----------C-AATAATTGCGACTTGATAACC----------------------------ACTCTGCCGCTTTAAGTGCTTAAACAGCCGACCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.CATCGGGTGCTGGCAAGAGTACGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000110
.................................................................................................................................................................................................................................................................................................CG-------------------AGTTC------GA------AAA--T--GTT--TATA---TTCAGC..............................................................................................................2611.0010000100
......GGTGCTGGCAAGAGTACGCTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000
.....GGGTGCTGGCAAGAGTACGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
.............................CAACATTTTGTCTGGCTAC.................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
..ATCGGGTGCTGGCAAGAGTACGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
................................................................................................................................................................................................................................................................................................................................................................................................................AACC----------------------------ACTCTGCCGCTTTAAGT................2111.0011000000
...........................CTCAACATTTTGTCTGGCTAC.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
...........TGGCAAGAGTACGCTGCTCAACATTT............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
droYak3
CCATCGGGCGCTGGCAAGAGTACGCTGCTCAACATTTTGTCTGGCTACAAGTAGGTTTCGCAG-------------------GGC-CTGATTATTTGCATTCACATCAAG-TAG--------------CT--------G---CTGAC---T--------CCGA---CACT---G---AAC-----------------------------------------------GT--ATCTGACCTTGCGCCG-----------G-------CACA-CGAGAAT--ACGGCGAACCG-------------------AGTTC------GA------AAC--T--GTT--TATA---TTCAGCCCTGTATTATCATCAG----------A-AATAATTGCGACTTGATAACC----------------------------ACTTTGCCGCTTTTGGTGCTTAAACAGCCGACCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................GCTCAACATTTTGTCTGGCTACA................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
............GGCAAGAGTACGCTGCTCAACAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
..............................AACATTTTGTCTGGCTACA................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
..........................GCTCAACATTTTGTCTGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
..........CTGGCAAGAGTACGCTGCTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.CATCGGGCGCTGGCAAGAGTACGCTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
.........GCTGGCAAGAGTACGCTGCTCAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
...................................................................................................................................................................................................................................................................................................................................................T--TATA---TTCAGCCCTGTATTATC...................................................................................................2211.00101000000000
...................GTACGCTGCTCAACATTTTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000
..........CTGGCAAGAGTACGCTGCTCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
...................................................................................................................................................................................................................................................................................................................................................................................................ATTGCGACTTGATAACC----------------------------ACTC.............................2111.00100100000000
..............................AACATTTTGTCTGGCTAC.................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
...............................ACATTTTGTCTGGCTACAA...............................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
droEug1
CCATCGGGCGCTGGCAAGAGTACGCTTCTCAACATTTTGTCGGGCTACAAGTAAGTTTGGTAG-------------------GACCCTGATAATTTGCATTCACATTAAG-TAG--------------CT--------G---CTG---------AA-ATGCGAA-TCACC---G---AACGTAC-------A------TATAATACAT--------------------T--ATATGACCTTAAGCT----------------------GA-GTAGAAT--ACGGCAATACA-------------------AGTGC------GA------GTA--T--GTT--T---------------TTATTATCAACAA----------A-AATAATTCCGACTTGATAAGCG---GCAA-------------AAGAGCCAGTTTA---------GCGCTTGAATCTTTAACCSizeHit CountTotal NormTotal
No Reads
droBia1
CCGTCGGGCGCTGGCAAGAGTACGCTGCTCAACATTTTGTCCGGCTACAAGTAAGTTGGGCTG-------------------GGC-CTGATAATTCGCATTCACATCAAG-TAG--------------CT--------G---CT---------AAA-ATCCGAA-TCCCC---G----TC-----------------------------------------------GA--ATCTGACCTTGCGCCA-----------G-------CACA-CGAGAAT--GCGGCGAAACG-------------------AGTGA------GA------GTG--T--GTT--CATA---ACCAGCCCTGTATTATCAACAG----------T-AATAATAGCGACTTGATAAGC----------------------------TCTCTGCCTCCCTTGGCGCTTGAACCGCCGACCSizeHit CountTotal NormTotal
No Reads
droTak1
CCGTCGGGCGCTGGCAAGAGTACGCTGCTCAACATTTTGTCCGGCTACAAGTAAGTTTCGCCC-----------GGTGGTGGGGC-CTGATAATTTGCATTCACTTCAAG-TAG--------------CT--------G---CT---------AAA-ATCCGAA-TCACC---G---AAC-----------------------------------------------CC--ATCTGACCTTGCGCC------------G-------CACA-CGAGAAT--ACGGCGAAACG-------------------AGTGC------GA------GTG--T--GTT--TATA---GCCAGCCCTGTACTATCAACAGTAA-------T-AATAATGGCGACTTGATAAGC----------------------------ACTCTGCCTCTTTCGGCGCTTGAACCGCCGACCSizeHit CountTotal NormTotal
No Reads
droEle1
CCATCGGGCGCTGGCAAGAGTACGCTGCTCAACATTTTGTCCGGCTACAAGTAAGTTT------------------------------GTACATTTGCATTCACTTCAAG-TGT--------------CT--------G---CTGAAGCTGCTGGA-ACCCGCA-TCACC---G------------------------------------------------------A--ATCTGACCTTGAGACG-----------G-------CACA-CGAGAAT--ACGGCAAAACG-------------------AGTGC------GAGAGCGAGTATATGTATT--TAT--TAGCCAGCCCTGTATTATCAACAA----------A-AATAAGTGCGACTTGATAAGC----------------------------ACTCTGCCTCTTTCGGAGCTTGAACCGCCGACCSizeHit CountTotal NormTotal
No Reads
droRho1
CCATCAGGCGCTGGCAAGAGTACGCTGCTCAATATTTTGTCCGGCTACAAGTAAGTTTAACTG-------------------GGC-CTGATAATTTGCATTCACCTCAAG--AG--------------AT--------T---CT---------GAA-ATTCGAA-TCACC---A------------------------------------------------------A--ATCTGACCTTGGGA------------------------------------CGGCACAACG-------------------AGTGC------GA------GTGCAT--GTATTTAT--TAGCTAGCGC--TATTATCAACAG----------A-AATAATTGCGACTTGATAAGC----------------------------ACTCTGCCTCTTTCGGAGCTTGAACCGCCGACCSizeHit CountTotal NormTotal
No Reads
droFic1
CCATCGGGCGCTGGCAAGAGCACGCTGCTCAACATTTTGTCCGGCTACAAGTAAGTTTGGCTG-------------------GGC-CTGATAATTTGCATTCACATCAAG-TAA--------------CA--------G---TCGAA---G---------------CGGC---G---AAC-----------------------------------------------CG--ATTTGACCTTGCGCCG-----------A-------CGCA-AGGGAAC--ACGGCAAAACGGGA-----GCGCGAGTGCGAGTGCGATGGCGAGTGCGAGTC--C--ATT--TAT--TAGCCAGCCCTGTATTATCAGCAG----------A-AATTATTGCGACTTGATAAGC----------------------------ACTCCGCCTCTTTCGGAGCTTGAACCGACGACCSizeHit CountTotal NormTotal
No Reads
droKik1
CCATCGGGCGCTGGCAAGAGTACCCTGCTCAATATTTTGTCTGGCTACAAGTGAGTTTTCTTT-----GCTTCC---------AA-CTGATAATTTGCATGCACAACAAGGTAGGGG-TAC-GCGTAGTA--------G---CT---------GGA-ATTCGAA-ACATCGCCGCCGCACGCACACTCTGAAAACATATATAATA-ATAATAAAAAACAAAAAAAACTC--AGCTGACCTTGGGG--------------------------CCAGAAT--ATGGCGAATCG-------------------AGTGC------GG------GTA--C--AAT--TATATTAGCCAGCCGCTTATTATCAACAG----------AAAATAATTGTGACTTGATAAGC----------------------------AGTCTCTCTCTCTC---TCTTGAACCGCCGACCSizeHit CountTotal NormTotal
No Reads
droAna3
CCGTCCGGCGCTGGCAAGAGCACGCTGCTCAACATTTTGTCCGGCTACAAGTGAGTAG--AAG------AGACC---------GA-CTCGTCATTTGCATTCAGACCGTG-TAGAAGCTACTGCCCAGAAGCGAGTCCGATTC----------------ACAAT-TCGCC---G---AAC-----------------------------------------------GC--ACCTGACCTTGTGCCAGCTGCCA-------------GCC-AGCGAGT--GCGGCCAGCGG---------------------------------------AA--T--GTT--ATTA---GCGAGCCCTGTATTATCAACAG----------A-AATAATTGCGCCTTGATAAGCATGAACTAACGACCCTTTCACGGT----CGCCTGTCGTCGCCGGTGCCTGTGCCTGTGCCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................GCACGCTGCTCAACATTTTGTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
......GGCGCTGGCAAGAGCACGCTGCTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100
.CGTCCGGCGCTGGCAAGAGCACGCTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
..........CTGGCAAGAGCACGCTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.............................CAACATTTTGTCCGGCTACAAAAC............................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.......................................................................................................................................TCCGATTC----------------ACAAT-TCGCC---G---AAC-----------------------------------------------GC--ACC.......................................................................................................................................................................................................................................2711.001010000
..........CTGGCAAGAGCACGCTGCTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
...............................................................................................................................................................................................................................................................................AGCGAGT--GCGGCCAGCGG---------------------------------------AA--T--G...............................................................................................................................2211.001100000
CCGTCCGGCGCTGGCAAGAGCACGCTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
.........GCTGGCAAGAGCACGCTGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
droBip1
CCATCCGGCGCTGGCAAGAGCACGCTGCTCAACATTTTGTCCGGCTACAAGTGAGTA-----G-------------------AGT-CTCGTCATTTGCATTCACACCATG-TAGGAGCCACT---CAGAAGCGAGTCCGAATCTGAA---T--------CCGAATTCGAT---G---AAC-----------------------------------------------GC--ACCTGACCTTGTC--AG-TGCCAGCCAGCACTCTCCGCACCGGGAGT--ACGGCGGA-------------------------------------------A--T--GTT--ATTA---GCAAGCCCTGTATTATCAACAG----------A-AATAATTGCGCCTTGATAA-----------------------------------------------GCTTGAACTAACGACCSizeHit CountTotal NormTotal
No Reads
dp5
CCATCCGGCGCTGGCAAGAGTACGCTCCTGAATATTTTGTCTGGCTACAAGTAAGTTTGGCTTTGTCTGATGCCG-------ATG-ATGATAATTTGCATTCACAACGAG-TAG--------------CT--------G---GT---------ACATAT---------T--------------T-------TCGCATGTG---TGTAT-----------------GTGTGTTGATGACCTTGTGGAA-----------A-------TACA-CCAGAATGTACGGCACACGGTGCCTGTTGCGC-CGTACTAGTGC------TAGTGCGAGTA--T--ATT--TATA--AGCCCGCCCTGTATTATCAGCATTACTATAAAGA-AATATGTACGACTTGATAAGT----------------------------ACACTGCCTCTCAGAGAGCTTGAACCGCCGACCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..........CTGGCAAGAGTACGCTCCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...........................................................................................................................................................................................................................................................................................GCACACGGTGCCTGTTGCGC-C................................................................................................................................................................2111.0010100000000
............................................................................................................................................................................................................GTAT-----------------GTGTGTTGATGACCTTG...............................................................................................................................................................................................................................2111.0010100000000
CCATCCGGCGCTGGCAAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
............GGCAAGAGTACGCTCCTGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
......GGCGCTGGCAAGAGTACGCTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................AGA-AATATGTACGACTTGATAAGT----------------------------A................................2511.0010000100000
.............GCAAGAGTACGCTCCTGAATATTTTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
droPer2
CCATCCGGCGCTGGCAAGAGTACGCTCCTGAATATTTTGTCTGGCTACAAGTAAGTTTGGCTTTGTCTGATGCCG-------ATG-ATGATAATTTGCATTCACAACGAG-TAG--------------CT--------G---GT---------ACATAT---------T--------------T-------TCGCATGTG---TGTAT-----------------GTGTGTTTATGACCTTGTGGAA-----------A-------TACA-CCAGAATGTACGGCACACGGTGCCTGTTGCGC-CGTACTAGTGC------TAGTGCGAGTA--T--ATT--TATA--AGCCCGCCCTGTATTATCAGCATTACTATAAAGA-AATATGTACGACTTGATAAGT----------------------------ACACTGCCTCTCAGAGAGCTTGAACCGCCGACCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............AAGAGTACGCTCCTGAATATTTTGTCTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2914.004400000
...................GTACGCTCCTGAATATTTTGTCTGGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................2714.004400000
...................GTACGCTCCTGAATATTTTGTCTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
..............................AATATTTTGTCTGGCTAC.................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...................GTACGCTCCTGAATATTTTGTCTGGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..............................................ACAAGTAAGTTTGGCTTTGTCTGATGCC.......................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
................AGAGTACGCTCCTGAATATTTTGTCTGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
........................................................................................GATAATTTGCATTCACAACGA....................................................................................................................................................................................................................................................................................................................................................................2111.001001000
.............................GAATATTTTGTCTGGCTA..................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.......................GCTCCTGAATATTTTGTCTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000
..........CTGGCAAGAGTACGCTCCTGAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
....CCGGCGCTGGCAAGAGTACGCTCCTGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.............................GAATATTTTGTCTGGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................1820.501100000
droWil2
CCATCGGGAGCTGGCAAATCTACTTTGCTCAACATTTTGTCTGGCTACAAGTAAGTCTGGAAC----TAAATTCA-------ATC-TTGATAATTTGCATTCAACACGAG-TAA--------------TC--------A---TC---------TAATAT---------A--------------C-------ATACATATA---TACAT-----------------AAGT--ATTTGACCTTGTGCGA-----------A-------A----------------------------------------------------------------T--T--GTC--TATA---TA-------------TGTACAA----------A-TATATGTGGAA-------------------------------ATGAG-----------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................CTACTTTGCTCAACATTTTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
...............................................................................................................................................................................................................................................TTGTGCGA-----------A-------A----------------------------------------------------------------T--T--GTC--TATA---....................................................................................................................1911.00100010
................AATCTACTTTGCTCAACATTT............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
.............................CAACATTTTGTCTGGCTACA................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
droVir3
CCATCCGGCGCTGGAAAGAGTACATTGCTCAACATTTTGTCGGGCTACAAGTGAGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................ATTGCTCAACATTTTGTCGGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2214.004030000000000001000000000000000000000000000000000000000000000000
...................GTACATTGCTCAACATTTTGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000100000000000000000000000000000000100000000000000000000000000
.......................ATTGCTCAACATTTTGTCGGGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002000000000000001001000000000000000000000000000000000000000000000
.............................CAACATTTTGTCGGGCTACAAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000001000000000000000000000000000
...................GTACATTGCTCAACATTTTGTCGGGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
..............................AACATTTTGTCGGGCTACAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
......GGCGCTGGAAAGAGTACATTGCTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000001000
...........TGGAAAGAGTACATTGCTCAACATTTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
.CATCCGGCGCTGGAAAGAGTACATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000001000000000000000000000000000000000000
....................TACATTGCTCAACATTTTGTCGGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..................AGTACATTGCTCAACATTTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
..........CTGGAAAGAGTACATTGCTCAACATTTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000001000000000000000000000000000000000000000000000
...............................ACATTTTGTCGGGCTACAAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
..ATCCGGCGCTGGAAAGAGTACATTGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000100000
droMoj3
CCATCAGGTGCTGGCAAGAGCACATTACTGAACATTTTGTCGGGCTACAAGTGAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................ACATTACTGAACATTTTGTCGGGCTACA................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000010
..ATCAGGTGCTGGCAAGAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
CCATCAGGTGCTGGCAAGAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.....................ACATTACTGAACATTTTGTCGGGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..ATCAGGTGCTGGCAAGAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
.....................ACATTACTGAACATTTTGTCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
CCATCAGGTGCTGGCAAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droGri2
CCATCGGGGGCTGGAAAGAGTACTTTACTCAATATTTTGTCGGGCTATAAGTAAGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..ATCGGGGGCTGGAAAGAGTACTTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110
...................GTACTTTACTCAATATTTTGTCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110
.......................TTTACTCAATATTTTGTCGGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110

Generated: 05/18/2015 at 05:47 PM