ID:

dsi_6063

 Coordinate:

3l:14065238-14065485 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-24.5 -24.5 -24.5

Flybase annnotation

five_prime_UTR [3l_14065455_14065709_+]; exon [3l_14065455_14065709_+]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------#################################################################################
CTGCCAACACCAACTGCTGTACTTTTGCCTGGCAGTGCTGTCTTTATTGAGTGAGTGTGCCTTTCATAGTGTGTGTGAGATCCAGTGGCATGTCAATAAGTTGCGCTCTCTGAGAGGGTTGTATGCTTCTCGAATGGTAACCCACGCTGCTTTGCCAAGAGAGCGACTACGCCTCTGGCTTTCAGTTTGTTGTGGCCCCTTTATTTATTTATTTTGCCGGTGGTTTATATTCTCCTCCCGTTAAGATTCAAATGTCCAGGTAATCAAATCGAATCAATCTAGTTCTCCTGTGCTTTAGAATCAAGAACAATTGCCATTTGAAATTGGAACATTCATTTGCAACTGCAT
**********************************************************************************************************************.((((.(((.((.....(((((.((((((((....(((.((((.(((....))))))))))...)))).....))))..................))))))).))).)))).********************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M024
male body		 O001
Testis
 SRR553485
Chicharo_3 day-old ovaries
 GSM343915
embryo
 SRR902009
testis
...........................................................................................................................................................................................................................................................................................................................TTTTGAAATTGGAACATTCATTA.......... 23 2 1 2.00 2 0 2 0 0 0 0 0 0 0
......................................................................................................................TTGTATGCTTCTCGAATGGTA................................................................................................................................................................................................................. 21 0 1 2.00 2 0 0 0 1 1 0 0 0 0
.................................................................................................................................................................................................................TATTTTGCCGGTGGTTTATAT...................................................................................................................... 21 0 1 2.00 2 0 0 0 0 0 2 0 0 0
.............CTGCTGTACTTTTGCCTGGC........................................................................................................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.....................................................................................................TGCGCTCTCTGAGAGGGTTGTA................................................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...............................................................................................ATAAGTTGCGCTCTCTGAGAG........................................................................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................ACCCTCTCTGGGAGGGTTGTA................................................................................................................................................................................................................................. 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................TCTCTGTGAGGGTTGTA................................................................................................................................................................................................................................. 17 1 1 1.00 1 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................TGTGCTTTAGAATCAAGAACAATTGC.................................. 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0
...................................................................................................GTTGCGCTCTCTGAGAGGGTT.................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
.....................................................................................TGGCCTGTCAATAAGTATCGCT................................................................................................................................................................................................................................................. 22 3 1 1.00 1 0 0 0 0 0 0 0 1 0
..........................................................................GTGAGATCCAGTGGCATG................................................................................................................................................................................................................................................................ 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0
....................................................................................................................................................................................................................TTTGCCGGTGGTTTTTATTCT................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 1 0 0
.................................................................................................................GAGGGTTGTACGCTTCCC......................................................................................................................................................................................................................... 18 2 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................TGTGCTTTAGAATCAAGAACA....................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................AGAGAGCGACTACGCCTCTGG.......................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................TTCAAATGTCCAGGTAATCAAATCGAA........................................................................... 27 0 1 1.00 1 0 0 0 0 0 0 1 0 0
....................................................................................................................................................GCTTTGCCAAGAGAGCG....................................................................................................................................................................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TTTATTTATTTATTTTGCCGG................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..................................GTGCTGTCTTTATTGAGTGAG..................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTTGCCGGTGGTTTATATTCT................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................TTTGGTTTGTTGTGGCCCCTT................................................................................................................................................... 21 2 2 0.50 1 0 0 0 0 0 0 0 0 1
......................................................................................................GCTCACTCTGTGAGGGTTGTA................................................................................................................................................................................................................................. 21 3 2 0.50 1 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................................CAGGTAAACAGATCGAATCA........................................................................ 20 2 2 0.50 1 0 0 1 0 0 0 0 0 0
........................................................................................................GCGCCCTTAGAGGGTTGTA................................................................................................................................................................................................................................. 19 3 3 0.33 1 1 0 0 0 0 0 0 0 0
.........................................................................................................CTCTGTGTGAGGGTTGTA................................................................................................................................................................................................................................. 18 2 3 0.33 1 0 0 1 0 0 0 0 0 0
...................................................................................................GTTGCGCTCACTGAGA......................................................................................................................................................................................................................................... 16 1 3 0.33 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................................................AATGTCCGGGTAATC................................................................................... 15 1 8 0.25 2 0 2 0 0 0 0 0 0 0
................................................................................................................TGAGGGTTGTATGCT............................................................................................................................................................................................................................. 15 1 6 0.17 1 0 0 0 0 0 0 0 0 1
..............................................................................................ATTAAGTTGGGCTCTCTG............................................................................................................................................................................................................................................ 18 2 8 0.13 1 0 0 0 0 1 0 0 0 0
............................................................................................................TTTGAGAGGGTTGTA................................................................................................................................................................................................................................. 15 1 8 0.13 1 1 0 0 0 0 0 0 0 0
.................................................................................................................GAGGGTTGTATGCGGCT.......................................................................................................................................................................................................................... 17 2 10 0.10 1 1 0 0 0 0 0 0 0 0
..........................................................................................................TCTTTGTGAGGGTTGTA................................................................................................................................................................................................................................. 17 2 16 0.06 1 0 0 1 0 0 0 0 0 0
...........................................................................................................ATCAGAGAGGGTTGTA................................................................................................................................................................................................................................. 16 2 20 0.05 1 1 0 0 0 0 0 0 0 0
...............................................................................................ATAAGTTGGGCACTCTGGG.......................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1 0 0 0 0
..........................................................................................................TTTCTGTGAGGGTTGTA................................................................................................................................................................................................................................. 17 2 20 0.05 1 1 0 0 0 0 0 0 0 0

Anti-sense strand reads

GACGGTTGTGGTTGACGACATGAAAACGGACCGTCACGACAGAAATAACTCACTCACACGGAAAGTATCACACACACTCTAGGTCACCGTACAGTTATTCAACGCGAGAGACTCTCCCAACATACGAAGAGCTTACCATTGGGTGCGACGAAACGGTTCTCTCGCTGATGCGGAGACCGAAAGTCAAACAACACCGGGGAAATAAATAAATAAAACGGCCACCAAATATAAGAGGAGGGCAATTCTAAGTTTACAGGTCCATTAGTTTAGCTTAGTTAGATCAAGAGGACACGAAATCTTAGTTCTTGTTAACGGTAAACTTTAACCTTGTAAGTAAACGTTGACGTA
**********************************************************************************************************************.((((.(((.((.....(((((.((((((((....(((.((((.(((....))))))))))...)))).....))))..................))))))).))).)))).********************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M023
head
 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 O001
Testis
 M053
female body
.....................................................................................................................................................................................................................................................TAAGTTTACAGGTGCA....................................................................................... 16 1 5 2.80 14 11 1 0 1 0 0 0 1 0 0
......................................................................................................................................................................................................................................................AAGTTTACAGGTGCA....................................................................................... 15 1 12 2.42 29 28 1 0 0 0 0 0 0 0 0
................................................................................................................TCTCCCAACATACGAAGAGCT....................................................................................................................................................................................................................... 21 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
.................................................................................................................................................................TCGCTGATGCGGAGACCGAAA...................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................................................TAAGTTTACAGGTGC........................................................................................ 15 1 13 1.00 13 10 1 0 1 0 0 0 1 0 0
..............................................................................................................................................................................................................................................................AGGTCCATTAGTTTAGCTTAGTTAG..................................................................... 25 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................................................................................................CTAAGTTTACAGGTCCATTAGTTTAG.............................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................................GAGACTCTCCCGACATACGGA............................................................................................................................................................................................................................ 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................................................................................ACAGGTCCATTAGTTTAGCTT........................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................TAGTTTAGCTTGGTTAGATCA................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................CTCACTCACACGGAAAGTAT........................................................................................................................................................................................................................................................................................ 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................TTAACCTTGTAAGTAAACGTT...... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................GCGAGAGACTCTCCCAACATA................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................GCTTAGTTAGATCAAGAGGA........................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................AATAAAACGGCCACCAAATATA...................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................AGTTTACAGGTCCATTAGTT................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................GACATGAAAACGGACCGTCAC....................................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................................................................................TTGGTTAGATCAAGAGGACAC........................................................ 21 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................................................................AAGTTTACAGGTCCATTAGTTT................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................AAGCGCATACCAGTGGGTG........................................................................................................................................................................................................... 19 3 5 0.80 4 2 1 0 0 0 0 0 0 1 0
...................................................................................................................................................................GCTGATGCGGAGAGC.......................................................................................................................................................................... 15 1 6 0.67 4 4 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................................................TAGTTTGGCTTAGTTAG..................................................................... 17 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................................TGTAAGTTTACAGGTGCA....................................................................................... 18 2 6 0.50 3 0 1 0 0 0 0 0 2 0 0
.................................................................................................................................................................TAGCTGATGCGGAGA............................................................................................................................................................................ 15 1 6 0.17 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................ATCAGGAGGACATGAAA.................................................... 17 2 9 0.11 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................................AGCGCATACCATTGGGTGA.......................................................................................................................................................................................................... 19 3 9 0.11 1 0 0 0 0 0 0 0 0 0 1
......................AAAACGGACCGTCAAG...................................................................................................................................................................................................................................................................................................................... 16 1 10 0.10 1 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................................................................TGTAAGTTTACAGGTGC........................................................................................ 17 2 20 0.10 2 0 0 0 2 0 0 0 0 0 0
...................................................................................................................................................................................................................................................TGTAAGTTTACAGGT.......................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:14065188-14065535 + dsi_6063 CTGCCAACACCAAC--T---GCTGTACTTTT---------GCCTGGCAG---------TGCTGTC----TTTATTGAGTGAG-------------------------TGTG--CCTTTCATAGTGTGTGTGAGATCCAGTGGCATGTCAATAAGTTGCGCTCTCTGAGAGGGTT-GTATGCTTCTCGAATGGT-AACCCACGCTGCTTTGC-CAAGAGAGCG-ACTACGCCTCTGGC----TTTCAGTTTGT----TGTGGCCCCTTTAT--TTATTTATTTTGCCGG----T-----------GGTTT----ATATTCTCCTCCCGTTA------------------------------------AGATTCAAATGTCCAG--GTAATC---AAATCGAATCAATCTAGTTCTCCTGTGCTTTA-GAATCAAGAACAATTGCCATTTGA--AATTG----------------GAAC-ATTCATTTGCAACTGCAT-----
droSec2 scaffold_0:6539564-6539911 + CTGCCAACACCAAC--T---GCTGTACTTTT---------GCCTGGCAG---------TGCTGTC----TTTATTGAGTGAG-------------------------TGTG--CCTTTCATTGTGTGTGTGAGATCCAGTGGCATGTCAAGAAGTTGCGCTCTCTGAGAGGGTT-GTATGCTTCTCGAATGGT-AACCCACGCTGCTATGC-GAAGAGAGCG-ACTACGCCTCTGAC----TTTCAGTTTGT----TGTGGCCCCTTTAT--TTATTTATTTTGCCGG----T-----------GGTTT----ATATTCTCCTCCCGTTA------------------------------------AGATTCAAATGTCCAG--GTAATC---AAATCGAATCAATCTAGTTCTCCTGTGCTTTA-GAATCAAGAACAATTGCCATTTGA--AATTG----------------GAAC-ATTCATTTGCAACTGCAT-----
dm3 chr3L:14403464-14403806 + CTGCCAACACCAAC--T---GCTATACTATTG--CATTAAGTCTGGCAG---------TGCTGTC----TACTTTGAGTGAG-------------------------TGTG--CCTTTCATTGTATGTGTGAGATCCAGTGGCATGTCAA-----TTCTCTCTCAGAGAGGGTT-GTATGCTGCTCGAATGGT-AACCCCCGCTGATTTGC-GAAGAGAATG-ACTACGCCTCTGGC----TTTCCGTTTGT----TGTGGCTCCTTTCT--TTATTTATTTTGCCGG----T-------G----TTTT----ATATTCTCCGCCCGTTAA-----------------------------------AGATTCAAATGTCCA-------------ATTCGAATCAGTCTAGTGCTCATGTGCTTTA-AAATCAAGAACAATTGCTATTTGA--AATTG----------------CAAC-ATTCATTTACAACTGCAT-----
droEre2 scaffold_4784:14383470-14383830 + CTGCCAACACTAAC--T---GCTGTACTTATG--CCTTGAGTCTGGCAG---------TGCTATC----ACTTTTAAAGTA-----------------------------------------GTGTGTGTGAGATCCAGGGGCAGCTCAATAACTTGCGCTCTCTGAGAGGGTTTGCATGTTCTGCGAATAGC-G-CCCCAGCCGATTTGAAGAAGAGAGCGCACTACGCCTCTGTC----TTTCAGTTTGT----TGTGCCCTTC-TTT--TTATTTATTTCGCCGGC---CAACGAGTGTTTTGTTTACATATATTCAACTCCCGTTAC-----------------------------------CGATTCAAATGCTCAGAGATAATC---AAATCGAGTCAGTCAAGTGCTCCTGTGCTTTA-GAATCAAGCCCAACTGCCATTTAA--AACTG----------------GAGC-ATTTATTTGCAACTTCAT-----
droYak3 3L:14496670-14496999 + CTGCCAACACTAAC--T---GCTATACTCTTG--C----------------------------------------GTATG---------------------------TGTGTTTCCTTTATTGTGTGTGTGAGATCCAGGGGCACCTCAAGCACTTGCGCTCTCTGAGAGGGTTTGCATGTTCGGCGAATAGT-AACCCCCGCTGATTTGC-GAAGAGAGCGCACTACGCCTCTGGC----TTTCAGTTTGT----TGTGCCCCTTTTATTTTTATTTATTTCGCCGG------------------TTT----ATATTCTCCACCCGTTAC-----------------------------------CGATTCAAATGTCCAG--GTAATC---ATATCGGGTCAGTCTAGTACTCCTGCGTTTTA-GAATCAAGCCCTACTGCCATTTGA--AATTG----------------GAGC-GCTCATTTGCAACTGCAT-----
droEug1 scf7180000409456:628411-628787 + CTGCCAACATCAAT--T---TCTTTTCCTTCG--CTTTGTGACTGGCAG---------CGCTG-CGCTCTCTTTGGACTCAGCTGTGT-AATT-TTGCTAGTGTGTGTGTG--------CTTGCTTGTTTGGGTGTCAGAGGCATTCCTTTAGTTTACACTCTTTGAGAGGGTT-GTATTCCCTATGAAAACTTGATCCCCTCTAACTTAG-AAAGAGAGCGCATTACGCCCC--------TTTAAGTTTGT----TGTGACCTCTTT--------TTCGTTGGCCGG----CAACGAGTGATTTGTTT----ATATTCGCTGCCCGTTAG-----------------------------------AGTTTTGAATGTCTAG-------CTGACACTTTAAATAATCTAGTAGTCTTGTGCTCTA-AAATCAGGAACAACTGCCCTTCGT--AATTG----------------CACT-AATCATTTTCAGTTGCAA-----
droBia1 scf7180000302428:5486700-5487066 - TTGCCAGCACTAAT--T---GCCTTTCTTTCG--TTTTGAGCTTGGCAG---------TGCTGCCGCTCTCTTTTGACGCAGAGGCCC--G----------------------------CGTGTGTGTGTGAGTGCCAGTGGCATGGCAACGTTTTGCGCTCTCCGAG-GGGCT-GTATGCCGTGCGAAAAGTGAACCCCCGCTGTGGTTC-AAAAAGAGCGCACAACGCCCATGCC----TCCGCGTTTGT----TGTGACCCTTTC------TTTCATTTCGCCGG----CAACGAGTGTTTTGTTT----ATATTCGCCGCCCGTTAG-----------------------------------CAATTCAAATGTCCAG--CTGAGCTGACATCCAAAACAATCTAGTGCCCTGGTTTTTGG-CAGTCAA-AACAGTTGTCACTTGC--AGTAG----------------CAAC-ATTCATTTGCAGTTGCAA-----
droTak1 scf7180000415135:61117-61493 + TTGCCAGCACGAAC--T---CGTTTTATTTCG--TTTTGCGTCTGGCAG---------TGCCGCCGCTCTCTTTTGACGCAGATGGTC-CGCGATT-C------------------TTGGGTGTGTGTGTGAGTGCCAGTGGCATGCCATAAATTTACGCTCTCCGAGAGGGTT-GCGTGCCTCGCGAAAAGT-GACCCCTGCTGGAATTT-GAAGAGAGCGCACACCGCCCCTGCC----TTTGCGTTTGT----TGTGACCCTTT-------TTTTGTTTCGCCGG----CAACGAGTGTTTTGTTT----ATATTCGCCGCCCGTTAG-----------------------------------CGATTCAAATGCCCAG--CCGGGCCGACAATCGAACCAATCTAGTGCCCTTGTGCTCTG-CACTCAATAACAATTGTCAGTTGC--AATCG----------------CAAC-ATTCATTTTCAGCTGCAA-----
droEle1 scf7180000491199:1531796-1532174 + ATGCCAACTCGAAC--T---AGATTTTTTTCTTTTTTTTTACTTGGCAG---------TGCCGTCGTTCTCTTTTGACGCAGCTGTGT-CGCTTTGGC------------------CTGTGTGTGTGTGTGAGTACCAGAGGCATAGCATTAATTCTCGCTCTCTGCGAGGGAG---ACGCCGTGCTAAAAGTTAGACCCCCCTGGCATTT-GTAGAGAGCGCTCGACGTCTCTGCC----TTTGGGTTTGT----TGTGACCCTTTTA-------TTATTTCGCCGG----CAACGAGTGTTTTGTTTAT--ATATCTGGCGCCCGTTAG-----------------------------------AGATTCAAATGACCAG-------CTGTTAATCGAAACAATCTAGCTATCCAGTGCTCCAGGTGTCAGAAGTAGTTGTTAATTGATTATATG-----------------AATGTTGCATTTGCAGCTCCAA-----
droRho1 scf7180000777489:3342-3715 + TTGCCAACGCAAAC--T---AGATTATTTTTG-ACTTTGTATCTGGCAG---------TGCCTTCGCTCTCTTTTGACGCAGCTGTGC-CGCTTGT--------------------G--CCTGAATGTGTGAGAGCCAGTGGCATGACATTTATTCTCACTTTCTGAGAGGGTA-GCAAGCTGTGCGAAAAGTCGGCCCCCGTTGGCATTT-GCAGAGAGTGCGCTCCGTCACTGGC----CTTAAGTTTGT----TGTGACCCTTA-------TTTTATTTCGCCGG----CAACGAGTGTTTTGTTT----ATATTCGACGCCCGTTAG-----------------------------------GGATTCAAATGACCAG-------CTGACAGGCGAAACAATCTAGTTCTCCGGTGCTCCGGGTGTCAAAAATAAATGTAAATTTATTAAATG-----------------AATGTTGGATTTGGAGCTGCAA-----
droFic1 scf7180000453784:743185-743534 + TTACCAGCAATAAC--A---ACATTATTTTTG--TTTCGTGTCTGGCAG---------CTTCGTTGTTCTCTTTTGAAGCAGAGT-AT--GAT-----------------------TGGGTTGTGTGTGTGAGACTCAGAGGCATGGTACTAGCTCGCGCTCTCTGAGAGGGTA-TCATGCACAGGGAAAAGC-AGACCCTGCTGGAATTT-AAAGAGAGCGCGCTACGCCCCTGCC----TTAGAGTTTGT----TTTGACTTTT--------TTTTATTTCGCCGG----CAACGAGTGTTTTGTTT----ATATTAGACGCCCGTTAG-----------------------------------CACCTTAAATAA--GG-------CTGAAAATCAAACCAATCTAGTGCTCCT-------A-GTGTTAAATGCAATTGTCACGT--------G----------------CAAC-ATTTTATTGCAGCTGCAA-----
droKik1 scf7180000302441:454248-454585 + TTGCCAGCCTAAAAAATGCAACATTTGCTTAG--ATTTGAGTCTGGCAG---------CGCTGTCGCTCTCTTTGAAAGCAGCTT-----------------------------------ATGTTTGTGTGTGTGCCAGTGGCGTGGCATGAACTCTCGCTCTCTTTGGGGGTT-GCATGCCGAACGTAAACACAAACCCTGTTGTTATTT-CGCGTCCACTCACCACGCCTCTGTA----CTT------GTCCGAATTAAAAGTC--------TTTTATTTTGCCGG----CAA-AATTGTTTTGTTT----CT----------CGTAAC-----------------------------------AGC------TGTTTA-----AATG---AAAGCTAAGCTATCTAGTGTCCCTTTG------GCGACTGACATTTCTATCGCATTGTCACAAA-----------------AA------TATTGCAGCAGCAATATAA
droAna3 scaffold_13337:4668946-4669293 - ACC--------A-----------------------------CTTGCCAGATCTGGCAATACCGGCGTTCTCTTCCGTCGAAACCTTT-------------------------------C------------GATGCCAGGGGCGTACT-GCAACATCCGCTCTCTTCAAGGGTT-TAACGCTGAACAACAAAC-CTTCCCCCTTGGCATTC-ACTAGAGGGGTTTCGGGTCTTTGCTTAAGGTTGAGTTTGT----TGTGGTCAATACAT--TTTTTCTGCCTGCCGCCCTGCAATGTTT---------ACA----------------------------CTTTGGTTCAAAACTGCTTTATTTTGGAATTAAAATGTACG--------CCAACAACCAAAGCAATCTC------TTGTGTTTT---GTTCAAGAACTGTCAATAT---AACAACTATAGCTCGTGTTTTCTCGTGC-TGTTAGTTGCAACAGCAA-----
droBip1 scf7180000395450:789080-789404 - CCG------------------------------------GATCTGGCAA---------TACCGGCATTATCTTCGGTCAAAACCTTT-------------------------------C--------TGT-GGTGCCAGGGGCGTACCG-CAACATCCGCTCTCTTTAGGGGTT-TCTAGCTGTACAAAAAAC-CTTCCCCCTTGGAATTC-CCTACAGGGGTGTTGGGTCTTTGCTTAAGGTTGAGTTTGT----TTTGGTCAATCCG-----------GCTGCCACCCGGCAATGTTT---------ACG----------------------------TTTTGATTAAAAATTGCTTCATT------CTCAAAAGCCT-----------TAAAAACCAAGCAACCTCTGGCTTTT------G---CTTAATCGACAACCAATAT---TACAACTATAGCTCGTTTATTCTAGTGT-TGTAACTTGAAACAGCAA-----
dp5 XR_group6:7104588-7104847 + TTG------------------------------------TGCCTGGCAGTGCTGTGTGTGGCTTGGCTCTCTTTCGGCGCAGCTGTTCTCGCC-GT--------------------GTCACTGTGTGTGTGTGTTTCATAGGTATCGTCGTGCCAGACGCACTCCGAGAGGGTT-GAATCGCTTGGAATATTCTGTGCCCCTTTGGCATTT-CCTGAGAGCGGACACCGTCCATGTTTTCGTTTCGGTTTGT----TGTGGCATTTTTGT--GTGTTTTTGTTGCCGGC---T-----------CGTTC---------------------ACGTTTTGCGCTTCCG-----------------------------------------A--------------------------------------------------------------------------------------------GCATTTTCAAGTG--------
droPer2 scaffold_41:456648-456907 + TTG------------------------------------TGCCTGGCAGTGCTGTGTGTGGCTTGGCTCTCTTTCGGCGCAGCTGTTCTCGCC-GT--------------------GTCACTGTGTGTGTGTGTTTCATAGGTATCGTCGTGCCAGACGCACTCCGAGAGGGTT-GAATCGCTTGGAATATTCTGTGCCCCTTTGGCATTT-CCTGAGAGCGGACACCGTCCATGTTTTCGTTTCGGTTTGT----TGTGGCATTTCTGT--GTGTTTTTGTTGCCGGC---T-----------CGTTC---------------------ACGTTTTGCGCTTCCG-----------------------------------------A--------------------------------------------------------------------------------------------GCATTTTCAAGTG--------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CTGCCAACACCAAC--T---GCTGTACTTTT---------GCCTGGCAG---------TGCTGTC----TTTATTGAGTGAG-------------------------TGTG--CCTTTCATAGTGTGTGTGAGATCCAGTGGCATGTCAATAAGTTGCGCTCTCTGAGAGGGTT-GTATGCTTCTCGAATGGT-AACCCACGCTGCTTTGC-CAAGAGAGCG-ACTACGCCTCTGGC----TTTCAGTTTGT----TGTGGCCCCTTTAT--TTATTTATTTTGCCGG----T-----------GGTTT----ATATTCTCCTCCCGTTA------------------------------------AGATTCAAATGTCCAG--GTAATC---AAATCGAATCAATCTAGTTCTCCTGTGCTTTA-GAATCAAGAACAATTGCCATTTGA--AATTG----------------GAAC-ATTCATTTGCAACTGCAT-----SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................TT-GTATGCTTCTCGAATGGT-A..................................................................................................................................................................................................................................................................................................................2112.00201000000010000000
.....................................................................................................................................................................................................................................................................................TATTTTGCCGG----T-----------GGTTT----ATAT........................................................................................................................................................................................2112.00200002000000000000
.............C--T---GCTGTACTTTT---------GCCTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000001000000000
...........................................................................................................................................................TGCGCTCTCTGAGAGGGTT-GTA...................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
.....................................................................................................................................................ATAAGTTGCGCTCTCTGAGAG...........................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCTTTA-GAATCAAGAACAATTGC..........................................................2611.00100000001000000000
.........................................................................................................................................................GTTGCGCTCTCTGAGAGGGTT-......................................................................................................................................................................................................................................................................................................................................2111.00100000000010000000
................................................................................................................................GTGAGATCCAGTGGCATG...................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCTTTA-GAATCAAGAACA...............................................................2111.00100000000100000000
......................................................................................................................................................................................................................AGAGAGCG-ACTACGCCTCTGG.........................................................................................................................................................................................................................................................................2111.00100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................TTCAAATGTCCAG--GTAATC---AAATCGAA....................................................................................................2711.00100000010000000000
............................................................................................................................................................................................................GCTTTGC-CAAGAGAGCG-......................................................................................................................................................................................................................................................................................1711.00100000000001000000
.........................................................................................................................................................................................................................................................................TTTAT--TTATTTATTTTGCCGG----.................................................................................................................................................................................................................2111.00100000000100000000
................................................G---------TGCTGTC----TTTATTGAGTGAG-------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000001000000
........................................................................................................................................................................................................................................................................................TTTGCCGG----T-----------GGTTT----ATATTCT.....................................................................................................................................................................................2111.00100000000010000000
droSec2
CTGCCAACACCAAC--T---GCTGTACTTTT---------GCCTGGCAG---------TGCTGTC----TTTATTGAGTGAG-------------------------TGTG--CCTTTCATTGTGTGTGTGAGATCCAGTGGCATGTCAAGAAGTTGCGCTCTCTGAGAGGGTT-GTATGCTTCTCGAATGGT-AACCCACGCTGCTATGC-GAAGAGAGCG-ACTACGCCTCTGAC----TTTCAGTTTGT----TGTGGCCCCTTTAT--TTATTTATTTTGCCGG----T-----------GGTTT----ATATTCTCCTCCCGTTA------------------------------------AGATTCAAATGTCCAG--GTAATC---AAATCGAATCAATCTAGTTCTCCTGTGCTTTA-GAATCAAGAACAATTGCCATTTGA--AATTG----------------GAAC-ATTCATTTGCAACTGCAT-----SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................................................................................................................................................ATATTCTCCTCCCGTTA------------------------------------AGA....................................................................................................................................2011.0010010
dm3
CTGCCAACACCAAC--T---GCTATACTATTG--CATTAAGTCTGGCAG---------TGCTGTC----TACTTTGAGTGAG-------------------------TGTG--CCTTTCATTGTATGTGTGAGATCCAGTGGCATGTCAA-----TTCTCTCTCAGAGAGGGTT-GTATGCTGCTCGAATGGT-AACCCCCGCTGATTTGC-GAAGAGAATG-ACTACGCCTCTGGC----TTTCCGTTTGT----TGTGGCTCCTTTCT--TTATTTATTTTGCCGG----T-------G----TTTT----ATATTCTCCGCCCGTTAA-----------------------------------AGATTCAAATGTCCA-------------ATTCGAATCAGTCTAGTGCTCATGTGCTTTA-AAATCAAGAACAATTGCTATTTGA--AATTG----------------CAAC-ATTCATTTACAACTGCAT-----SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................AGAGAGGGTT-GTATC.................................................................................................................................................................................................................................................................................................................................15299.501990000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000033166000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................AATCAGTCTAGTGCTCAT....................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................GGTT-GTATGCTGCTCGAATGG.....................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................A-------------ATTCGAATCAGTCTAGTGC........................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................TATTTTGCCGG----T-------G----TTTT----ATATT.......................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTCTAGTGCTCATGTGCT...............................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................TGGT-AACCCCCGCTGATTTGC-GAAGAGA..........................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................................AGAGAATG-ACTACGCCTC............................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................TGGC----TTTCCGTTTGT----TGTGGC...............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAACAATTGCTATTTGA--.................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...................................................................................................................................................................CAGAGAGGGTT-GTATGCTGCT............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................CGCCCGTTAA-----------------------------------AGATTCAAATGTC..........................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................TCTCTCTCAGAGAGGGTT-GT....................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................TTATTTTGCCGG----T-------G----TTTT----ATAA........................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................................................TGAGTGAG-------------------------TGTG--CCTTTCATT...........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.............................................................TGTC----TACTTTGAGTGAG-------------------------TGTG--C...................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................T----ATATTCTCCGCCCGTTAA-----------------------------------AG.....................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................TATTCTCCGCCCGTTAA-----------------------------------AGAT...................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGTCTAGTGCTCATGTGCTTTA-AAA........................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................TTTGCCGG----T-------G----TTTT----ATATTCT.....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................CGTTTGT----TGTGGCTCCTTTCT--.....................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCATGTGCTTTA-AAATCA.....................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................CTCAGAGAGGGTT-GTATGCTG..............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGTCTAGTGCTCATGTGC................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................GT-AACCCCCGCTGATTTGC-GA...............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................TTTGC-GAAGAGAATG-ACTACG................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................TGTG--CCTTTCATTGTATGTGTG..................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTATTTGA--AATTG----------------CA..........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
...............................................................................................................................................................CTCTCAGAGAGGGTT-GTATG.................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................GCCGG----T-------G----TTTT----ATATTCTCCGCCC...............................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTCTAGTGCTCATGTGCTTTA-AAA........................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................AATCAGTCTAGTGCTCATGTGCTTTA-...........................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TATGCTGCTCGAATGGT-AACC...............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................TCATGTGCTTTA-AAATCAAGAACAATTGC..........................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................AGGGTT-GTATGCTGCTCGAA........................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................TGTATGTGTGAGATCCAGTGG.......................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................TGTG--CCTTTCATTGTATGTGT...................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................CGTTAA-----------------------------------AGATTCAAATGTCCA-------------...........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGCTTTA-AAATCAAGAAC................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................CTCTCTCAGAGAGGGTT-GT....................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GCTCATGTGCTTTA-AAATCAAGAACAAT.............................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................TG-ACTACGCCTCTGGC----TTTCCG..............................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................TTATTTATTTTGCCGG----T-------G----TTT.................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTCTAGTGCTCATGTGCTTTA-AAAT.......................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................CTCTGGC----TTTCCGTTTGT----TGT..................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................CT--TTATTTATTTTGCCGG----T-------G----T...................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................CTCCGCCCGTTAA-----------------------------------AGATTCAAATG............................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................TCTCAGAGAGGGTT-GTATGCTGCTCG..........................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TTGCCGG----T-------G----TTTT----ATATTCT.....................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTCTAGTGCTCATGTGCTTTA-AAATC......................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................G---------TGCTGTC----TACTTTGAGTGAG-------------------------TGTG--....................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
droEre2
CTGCCAACACTAAC--T---GCTGTACTTATG--CCTTGAGTCTGGCAG---------TGCTATC----ACTTTTAAAGTA-----------------------------------------GTGTGTGTGAGATCCAGGGGCAGCTCAATAACTTGCGCTCTCTGAGAGGGTTTGCATGTTCTGCGAATAGC-G-CCCCAGCCGATTTGAAGAAGAGAGCGCACTACGCCTCTGTC----TTTCAGTTTGT----TGTGCCCTTC-TTT--TTATTTATTTCGCCGGC---CAACGAGTGTTTTGTTTACATATATTCAACTCCCGTTAC-----------------------------------CGATTCAAATGCTCAGAGATAATC---AAATCGAGTCAGTCAAGTGCTCCTGTGCTTTA-GAATCAAGCCCAACTGCCATTTAA--AACTG----------------GAGC-ATTTATTTGCAACTTCAT-----SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................CAAATGCTCAGAGATAAT................................................................................................................1811.0010000010
droYak3
CTGCCAACACTAAC--T---GCTATACTCTTG--C----------------------------------------GTATG---------------------------TGTGTTTCCTTTATTGTGTGTGTGAGATCCAGGGGCACCTCAAGCACTTGCGCTCTCTGAGAGGGTTTGCATGTTCGGCGAATAGT-AACCCCCGCTGATTTGC-GAAGAGAGCGCACTACGCCTCTGGC----TTTCAGTTTGT----TGTGCCCCTTTTATTTTTATTTATTTCGCCGG------------------TTT----ATATTCTCCACCCGTTAC-----------------------------------CGATTCAAATGTCCAG--GTAATC---ATATCGGGTCAGTCTAGTACTCCTGCGTTTTA-GAATCAAGCCCTACTGCCATTTGA--AATTG----------------GAGC-GCTCATTTGCAACTGCAT-----SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAAGCCCTACTGCCATTTGA--AATTG----------------GA..........................3015.00500000000005
...................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTA-GAATCAAGCCCA...............................................................1811.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTG----------------GAGC-GCTCATTTGCAACTGCAT-----2611.00100000010000
droEug1
CTGCCAACATCAAT--T---TCTTTTCCTTCG--CTTTGTGACTGGCAG---------CGCTG-CGCTCTCTTTGGACTCAGCTGTGT-AATT-TTGCTAGTGTGTGTGTG--------CTTGCTTGTTTGGGTGTCAGAGGCATTCCTTTAGTTTACACTCTTTGAGAGGGTT-GTATTCCCTATGAAAACTTGATCCCCTCTAACTTAG-AAAGAGAGCGCATTACGCCCC--------TTTAAGTTTGT----TGTGACCTCTTT--------TTCGTTGGCCGG----CAACGAGTGATTTGTTT----ATATTCGCTGCCCGTTAG-----------------------------------AGTTTTGAATGTCTAG-------CTGACACTTTAAATAATCTAGTAGTCTTGTGCTCTA-AAATCAGGAACAACTGCCCTTCGT--AATTG----------------CACT-AATCATTTTCAGTTGCAA-----SizeHit CountTotal NormTotal
No Reads
droBia1
TTGCCAGCACTAAT--T---GCCTTTCTTTCG--TTTTGAGCTTGGCAG---------TGCTGCCGCTCTCTTTTGACGCAGAGGCCC--G----------------------------CGTGTGTGTGTGAGTGCCAGTGGCATGGCAACGTTTTGCGCTCTCCGAG-GGGCT-GTATGCCGTGCGAAAAGTGAACCCCCGCTGTGGTTC-AAAAAGAGCGCACAACGCCCATGCC----TCCGCGTTTGT----TGTGACCCTTTC------TTTCATTTCGCCGG----CAACGAGTGTTTTGTTT----ATATTCGCCGCCCGTTAG-----------------------------------CAATTCAAATGTCCAG--CTGAGCTGACATCCAAAACAATCTAGTGCCCTGGTTTTTGG-CAGTCAA-AACAGTTGTCACTTGC--AGTAG----------------CAAC-ATTCATTTGCAGTTGCAA-----SizeHit CountTotal NormTotal
No Reads
droTak1
TTGCCAGCACGAAC--T---CGTTTTATTTCG--TTTTGCGTCTGGCAG---------TGCCGCCGCTCTCTTTTGACGCAGATGGTC-CGCGATT-C------------------TTGGGTGTGTGTGTGAGTGCCAGTGGCATGCCATAAATTTACGCTCTCCGAGAGGGTT-GCGTGCCTCGCGAAAAGT-GACCCCTGCTGGAATTT-GAAGAGAGCGCACACCGCCCCTGCC----TTTGCGTTTGT----TGTGACCCTTT-------TTTTGTTTCGCCGG----CAACGAGTGTTTTGTTT----ATATTCGCCGCCCGTTAG-----------------------------------CGATTCAAATGCCCAG--CCGGGCCGACAATCGAACCAATCTAGTGCCCTTGTGCTCTG-CACTCAATAACAATTGTCAGTTGC--AATCG----------------CAAC-ATTCATTTTCAGCTGCAA-----SizeHit CountTotal NormTotal
No Reads
droEle1
ATGCCAACTCGAAC--T---AGATTTTTTTCTTTTTTTTTACTTGGCAG---------TGCCGTCGTTCTCTTTTGACGCAGCTGTGT-CGCTTTGGC------------------CTGTGTGTGTGTGTGAGTACCAGAGGCATAGCATTAATTCTCGCTCTCTGCGAGGGAG---ACGCCGTGCTAAAAGTTAGACCCCCCTGGCATTT-GTAGAGAGCGCTCGACGTCTCTGCC----TTTGGGTTTGT----TGTGACCCTTTTA-------TTATTTCGCCGG----CAACGAGTGTTTTGTTTAT--ATATCTGGCGCCCGTTAG-----------------------------------AGATTCAAATGACCAG-------CTGTTAATCGAAACAATCTAGCTATCCAGTGCTCCAGGTGTCAGAAGTAGTTGTTAATTGATTATATG-----------------AATGTTGCATTTGCAGCTCCAA-----SizeHit CountTotal NormTotal
No Reads
droRho1
TTGCCAACGCAAAC--T---AGATTATTTTTG-ACTTTGTATCTGGCAG---------TGCCTTCGCTCTCTTTTGACGCAGCTGTGC-CGCTTGT--------------------G--CCTGAATGTGTGAGAGCCAGTGGCATGACATTTATTCTCACTTTCTGAGAGGGTA-GCAAGCTGTGCGAAAAGTCGGCCCCCGTTGGCATTT-GCAGAGAGTGCGCTCCGTCACTGGC----CTTAAGTTTGT----TGTGACCCTTA-------TTTTATTTCGCCGG----CAACGAGTGTTTTGTTT----ATATTCGACGCCCGTTAG-----------------------------------GGATTCAAATGACCAG-------CTGACAGGCGAAACAATCTAGTTCTCCGGTGCTCCGGGTGTCAAAAATAAATGTAAATTTATTAAATG-----------------AATGTTGGATTTGGAGCTGCAA-----SizeHit CountTotal NormTotal
No Reads
droFic1
TTACCAGCAATAAC--A---ACATTATTTTTG--TTTCGTGTCTGGCAG---------CTTCGTTGTTCTCTTTTGAAGCAGAGT-AT--GAT-----------------------TGGGTTGTGTGTGTGAGACTCAGAGGCATGGTACTAGCTCGCGCTCTCTGAGAGGGTA-TCATGCACAGGGAAAAGC-AGACCCTGCTGGAATTT-AAAGAGAGCGCGCTACGCCCCTGCC----TTAGAGTTTGT----TTTGACTTTT--------TTTTATTTCGCCGG----CAACGAGTGTTTTGTTT----ATATTAGACGCCCGTTAG-----------------------------------CACCTTAAATAA--GG-------CTGAAAATCAAACCAATCTAGTGCTCCT-------A-GTGTTAAATGCAATTGTCACGT--------G----------------CAAC-ATTTTATTGCAGCTGCAA-----SizeHit CountTotal NormTotal
No Reads
droKik1
TTGCCAGCCTAAAAAATGCAACATTTGCTTAG--ATTTGAGTCTGGCAG---------CGCTGTCGCTCTCTTTGAAAGCAGCTT-----------------------------------ATGTTTGTGTGTGTGCCAGTGGCGTGGCATGAACTCTCGCTCTCTTTGGGGGTT-GCATGCCGAACGTAAACACAAACCCTGTTGTTATTT-CGCGTCCACTCACCACGCCTCTGTA----CTT------GTCCGAATTAAAAGTC--------TTTTATTTTGCCGG----CAA-AATTGTTTTGTTT----CT----------CGTAAC-----------------------------------AGC------TGTTTA-----AATG---AAAGCTAAGCTATCTAGTGTCCCTTTG------GCGACTGACATTTCTATCGCATTGTCACAAA-----------------AA------TATTGCAGCAGCAATATAASizeHit CountTotal NormTotal
No Reads
droAna3
ACC--------A-----------------------------CTTGCCAGATCTGGCAATACCGGCGTTCTCTTCCGTCGAAACCTTT-------------------------------C------------GATGCCAGGGGCGTACT-GCAACATCCGCTCTCTTCAAGGGTT-TAACGCTGAACAACAAAC-CTTCCCCCTTGGCATTC-ACTAGAGGGGTTTCGGGTCTTTGCTTAAGGTTGAGTTTGT----TGTGGTCAATACAT--TTTTTCTGCCTGCCGCCCTGCAATGTTT---------ACA----------------------------CTTTGGTTCAAAACTGCTTTATTTTGGAATTAAAATGTACG--------CCAACAACCAAAGCAATCTC------TTGTGTTTT---GTTCAAGAACTGTCAATAT---AACAACTATAGCTCGTGTTTTCTCGTGC-TGTTAGTTGCAACAGCAA-----SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................CTTT-------------------------------C------------GATGCCAGGGGCGTACT-G...............................................................................................................................................................................................................................................................................................................................................................2311.001100000
....................................................................................................................................................................................................................ACTAGAGGGGTTTCGGGTCTTTG..........................................................................................................................................................................................................................................................................2311.001100000
droBip1
CCG------------------------------------GATCTGGCAA---------TACCGGCATTATCTTCGGTCAAAACCTTT-------------------------------C--------TGT-GGTGCCAGGGGCGTACCG-CAACATCCGCTCTCTTTAGGGGTT-TCTAGCTGTACAAAAAAC-CTTCCCCCTTGGAATTC-CCTACAGGGGTGTTGGGTCTTTGCTTAAGGTTGAGTTTGT----TTTGGTCAATCCG-----------GCTGCCACCCGGCAATGTTT---------ACG----------------------------TTTTGATTAAAAATTGCTTCATT------CTCAAAAGCCT-----------TAAAAACCAAGCAACCTCTGGCTTTT------G---CTTAATCGACAACCAATAT---TACAACTATAGCTCGTTTATTCTAGTGT-TGTAACTTGAAACAGCAA-----SizeHit CountTotal NormTotal
No Reads
dp5
TTG------------------------------------TGCCTGGCAGTGCTGTGTGTGGCTTGGCTCTCTTTCGGCGCAGCTGTTCTCGCC-GT--------------------GTCACTGTGTGTGTGTGTTTCATAGGTATCGTCGTGCCAGACGCACTCCGAGAGGGTT-GAATCGCTTGGAATATTCTGTGCCCCTTTGGCATTT-CCTGAGAGCGGACACCGTCCATGTTTTCGTTTCGGTTTGT----TGTGGCATTTTTGT--GTGTTTTTGTTGCCGGC---T-----------CGTTC---------------------ACGTTTTGCGCTTCCG-----------------------------------------A--------------------------------------------------------------------------------------------GCATTTTCAAGTG--------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................T-CCTGAGAGCGGACACCGTC..............................................................................................................................................................................................................................................................................2011.0010000001000
............................................................................................................................................................................................................................................................................................................................................GTTTTGCGCTTCCG-----------------------------------------A--------------------------------------------------------------------------------------------GCATTT...............2111.0010000010000
.........................................................................................................................................................................................................................................................................TTTGT--GTGTTTTTGTTGCCGG.....................................................................................................................................................................................................................2111.0010100000000
droPer2
TTG------------------------------------TGCCTGGCAGTGCTGTGTGTGGCTTGGCTCTCTTTCGGCGCAGCTGTTCTCGCC-GT--------------------GTCACTGTGTGTGTGTGTTTCATAGGTATCGTCGTGCCAGACGCACTCCGAGAGGGTT-GAATCGCTTGGAATATTCTGTGCCCCTTTGGCATTT-CCTGAGAGCGGACACCGTCCATGTTTTCGTTTCGGTTTGT----TGTGGCATTTCTGT--GTGTTTTTGTTGCCGGC---T-----------CGTTC---------------------ACGTTTTGCGCTTCCG-----------------------------------------A--------------------------------------------------------------------------------------------GCATTTTCAAGTG--------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................................................................................GTCCATGTTTTCGTTTCGGTT............................................................................................................................................................................................................................................................2111.001010000

Generated: 05/18/2015 at 10:47 PM