ID:

dsi_5830

 Coordinate:

4:813103-813252 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.9 -18.5 -18.3

Flybase annnotation

exon [4_812954_813102_+]; CDS [4_812954_813102_+]; intron [4_813103_813673_+]

Repeatable elements

NameClassFamilyStrand
DNAREP1_DYakRCHelitron-

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ATGTACTCATCTATCCCACAACCGATTGCAACGATGGCTGAAAATTACAAGTAGGTTTCTAAAAGCGTTGAAATGGGTGTTCGAGTAAGAGTGGCAACATGGGTCAACAAACTTGCGCTTCTGCTTTGTCTCTAGAATCTGCGAACATCGCCAGATCGACTCAGCTTTTGATCCTGATCAAGAATATATATACTTTATATGCTCGGAAACGCTTCTTTCTGTCTGTTACTTACTTTTCAACGAATCTAGT
**********************************************************.................((((((((((....((.(((((((.(((((((.....))).)))).))..))))).)).....)).))))))))......*********************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 M025
embryo
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 M053
female body
 GSM343915
embryo
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
..............................................................................................................................TGTCTCTAGAATCTGCGAACATCGCCAGA............................................................................................... 29 0 1 26.00 26 21 0 5 0 0 0 0 0 0 0 0
............................................................................................................................TTTGTCTCTAGAATCTGCGAACATCGC................................................................................................... 27 0 1 20.00 20 0 0 0 20 0 0 0 0 0 0 0
..............................................................................................................................TGTCTCTAGAATCTGCGAACATCGCCA................................................................................................. 27 0 1 19.00 19 9 0 10 0 0 0 0 0 0 0 0
...........................................................................................................................................TGCGAACATCGCCAGATCGACTCAGC..................................................................................... 26 0 1 12.00 12 2 3 2 2 2 1 0 0 0 0 0
..............................................................................................................................TGTCTCTAGAATCTGCGAACATCGC................................................................................................... 25 0 1 11.00 11 3 0 7 0 0 1 0 0 0 0 0
..............................................................................................................................TGTCTCTAGAATCTGCGAACATCGCC.................................................................................................. 26 0 1 8.00 8 4 0 4 0 0 0 0 0 0 0 0
..............................................................................................................................TGTCTCTAGAATCTGCGAACATCGCCAG................................................................................................ 28 0 1 7.00 7 4 0 3 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................ATATACTTTATATGCTCGGAAACGCT..................................... 26 0 1 7.00 7 5 1 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................TACTTTATATGCTCGGAAACGCTTCT.................................. 26 0 1 4.00 4 1 0 2 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................................TTTCTGTCTGTTACTTACTTTTCAACGA....... 28 0 1 4.00 4 1 0 2 0 0 1 0 0 0 0 0
...........................................................................................................................................................TCGACTCAGCTTTTGATCCTGATCAAGA................................................................... 28 0 2 3.00 6 5 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................................TGCGAACATCGCCAGATCGACTCAGCT.................................................................................... 27 0 1 3.00 3 0 1 0 1 0 0 1 0 0 0 0
...................AACCGATTGCAACGATGGCTG.................................................................................................................................................................................................................. 21 0 1 3.00 3 0 2 0 0 1 0 0 0 0 0 0
...............CCACAACCGATTGCAACGATGGCT................................................................................................................................................................................................................... 24 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCTTTCTGTCTGTTACTTACT................ 22 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0
.............................................TACAAGTAGGTTTCTAAAAGCGTTGAAA................................................................................................................................................................................. 28 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCTTTCTGTCTGTTACTTACTA............... 22 1 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TACTTTATATGCTCGGAAACGCTTCTT................................. 27 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................TCTGCGAACATCGCCAGATCGACTCAGC..................................................................................... 28 0 1 2.00 2 0 0 0 0 1 1 0 0 0 0 0
........................................................................................................CAACAAACTTGCGCTTCTGCTTTGT......................................................................................................................... 25 0 1 2.00 2 0 0 0 1 1 0 0 0 0 0 0
............................................................................................................................................GCGAACATCGCCAGATCGACTC........................................................................................ 22 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TACTTTATATGCTCGGAAACGCTTCTTT................................ 28 0 1 2.00 2 1 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................TTCTGTCTGTTACTTACTTTTCAACGA....... 27 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CTGTCTGTTACTTACTTTTCAACGA....... 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
........................................................................................................CAACAAACTTGCGCTTCTGCTTT........................................................................................................................... 23 0 1 2.00 2 0 1 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................GATCGACTCAGCTTTTGATCCTGAT........................................................................ 25 0 1 2.00 2 0 1 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................ATATACTTTATATGCTCGGAAACGCTTC................................... 28 0 1 2.00 2 0 0 0 0 0 0 1 1 0 0 0
........................................................................................................CAACAAACTTGCGCTTCTGCTTTG.......................................................................................................................... 24 0 1 2.00 2 0 0 0 0 1 0 1 0 0 0 0
..........................TGCAACGATGGCTGAAAATTACAAGTA..................................................................................................................................................................................................... 27 0 1 2.00 2 0 0 1 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................GAATATATATACTTTATATGCTCGGA........................................... 26 0 3 2.00 6 0 1 0 0 5 0 0 0 0 0 0
.......................................................................................................................................................................................ATATATATACTTTATATGCTCGGA........................................... 24 0 3 1.67 5 0 0 2 1 2 0 0 0 0 0 0
..............................................................................................................................................................................................TACTTTATATGCTCGGAAACGCT..................................... 23 0 2 1.50 3 2 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................TACTTTATATGCTCGGAAACGCTTC................................... 25 0 2 1.50 3 2 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................................TCTGCGAACATCGCCAGATCGACTC........................................................................................ 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCTTTCTGTCTGTTACTTA.................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................TGTCTGTTACTTACTTTTCAACGAA...... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................................TTCTTTCTGTCTGTTACTTACTTTTC............ 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
............................................TTACAAGTAGGTTTCTAAAAGCGTT..................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................ATATGCTCGGAAACGCTTCTT................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TATGCTCGGAAACGCTTCTTTC............................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................ATATATATACTTTATATGCTCGGAC.......................................... 25 1 3 1.00 3 0 0 0 0 3 0 0 0 0 0 0
.............................................................................................................AACTTGCGCTTCTGCTTTGTCTCT..................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCTTTCTGTCTGTTACT.................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................TGCTCGGAAACGCTTCTTTCTGTCTG......................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCTTTCTGTCTGTTACTTACTATATA........... 26 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................GAATCTGCGAACATCGCA.................................................................................................. 18 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................CTAGAATCTGCGAACATCGCCAGA............................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TTTCTGTCTGTTACTTA.................. 17 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TTTATATGCTCGGAAACGCTTCTTT................................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................AACTTGCGCTTCTGCTTTGTCTCTA.................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................................AAATTACAAGTAGGTTTCTAA............................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................TGCTTTGTCTCTAGAA................................................................................................................. 16 0 2 1.00 2 0 2 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................GCTCGGAAACGCTTCTTTCTGTC........................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................TCTAGAATCTGCGAACATCGCCT................................................................................................. 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................ATATGCTCGGAAACGCTTCTTT................................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................GTCTCTAGAATCTGCGAACATCGCCAGA............................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................AACTTGCGCTTCTGCTTTGTCTC...................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................TATATATACTTTATATGCTCGGAAACG....................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................TATGCTCGGAAACGCTTCTTTCT.............................. 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.............................AACGATGGCTGAAAATTACA......................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
................................................................................................................................................ACATCGCCAGATCGACTCAGCTTT.................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..........................................................CTAAAAGCGTTGAAATGGGTG........................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TGCGAACATCGCCAGATCGACTCAGCTT................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................GAACATCGCCAGATCGACTCAGCTTT.................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................TCTAGAATCTGCGAACATCGCCAGAT.............................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................AACTTGCGCTTCTGCTTTGTCTCTAGA.................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TGTCTCTAGAATCTGCGAACATCGCCATGG.............................................................................................. 30 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................TATATGCTCGGAAACGCTTCTTTC............................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTCTTTCTGTCTGTTACTTAAAAT.............. 24 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................CTCTAGAATCTGCGAACA....................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................TCTAGAATCTGCGAACATCGCCAGATC............................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................TCTAGAATCTGCGAACATCGAC.................................................................................................. 22 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.............................................................................................................AACTTGCGCTTCTGCTTTGTC........................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..............................ACGATGGCTGAAAATTACAAGTAGG................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................ATGCTCGGAAACGCTTCTTTC............................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCTTTCTGTCTGTTACTTACTTTTCAACGA....... 30 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..................................................................................................................................TCTAGAATCTGCGAACATCG.................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................TGCGAACATCGCCAGATCGACTCAG...................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................CAACAAACTTGCGCTTCTGCTTTGG......................................................................................................................... 25 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................ATCTGCGAACATCGCCAGATCGACTC........................................................................................ 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................TCTGTCTGTTACTTACTTTTCAACGA....... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TATGCTCGGAAACGCTTCTTTCTGTC........................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCTTTCTGTCTGTTACT.................... 17 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................ATATATATACTTTATATGCTCGGAA.......................................... 25 0 3 1.00 3 0 0 0 0 3 0 0 0 0 0 0
..................................................................................................................................TCTAGAATCTGCGAACATCGCCAGA............................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................TGTCTCTAGAATCTGCGAACATCG.................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................GGAAACGCTTCTTTCTGTCTGTTACT.................... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
......................................................................AAATGGGTGTTCGAGTAAGAG............................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................TGGGTGTTCGAGTAAGAGTGGCAACAT...................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
................................GATGGCTGCAACTTACAAGAAG.................................................................................................................................................................................................... 22 3 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
.......................................................................AATGGGTGTTCGAGTAAGAGT.............................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................TAGAATCTGCGAACATCGCCT................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................TGCGAACATCGCCAGA............................................................................................... 16 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.........................TTGCAACGATGGCTGAAAATT............................................................................................................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................................................TATATGCTCGGAAACGCTTCTTTCTGTC........................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................TGTCTCTAGAATCTGCGAACA....................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................TGCGAACATCGCCAGATCGACTC........................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................GCGAACATCGCCAGATCGACTCAGCTTT.................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...............CCACAACCGATTGCAACGATGGCTGA................................................................................................................................................................................................................. 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
.........................................................................TGGGTGTTCGAGTAAGAGTGGCAACA....................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................TTTCTTTCTGTCTGTTACT.................... 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................................CAATAAACTTGCGCTTCTGCTTTGT......................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCTTTCTGTCTGTTACTTAAA................ 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................TCGGAAACGCTTCTTTCTGTCTGTTAC..................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
....................ACCGATTGCAACGATGGCTGAA................................................................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCTTTCTGTCTGTTACTTACT................ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCTTTCTGTCTGTTACTTACTATA............. 24 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................GATCGACTCAGCTTTTGATCCTG.......................................................................... 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
..................................................................................................................................................................................................TTATATGCTCGGAAACGCTTCTTTC............................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................TGCGAACATCGCCAGATCGACTCAGCTTT.................................................................................. 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................GAATATATAAACTTTATATGCTGGGA........................................... 26 2 8 0.75 6 3 0 2 0 0 1 0 0 0 0 0
.....................................................................................................................................................................................GAATATATATACTTTATATGCTCGGAAA......................................... 28 0 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................ATATATATACTTTATATGCTCGGAAA......................................... 26 0 3 0.67 2 0 0 0 0 2 0 0 0 0 0 0
..............................................................................................................................................................................................TACCTTATATGCTCGGAAATGCT..................................... 23 2 9 0.56 5 1 0 4 0 0 0 0 0 0 0 0
....................................................................................GTAAGAGTGGCAACATGGGTCA................................................................................................................................................ 22 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................TAAGAGTGGCAACATGGGTCAACAAACT......................................................................................................................................... 28 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................GATCGACTCAGCTTTTGAGCCTGAT........................................................................ 25 1 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
....................................................................................GTAAGAGTGGCAACATGGGTCAACA............................................................................................................................................. 25 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................CTCAGCTTTTGATCCTGATC....................................................................... 20 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TCAGCTGTTGATTCTGATCCAGAATA................................................................ 26 3 20 0.50 10 0 0 10 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCTTTCTGTCTGTTACTTACTCTCT............ 25 3 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................AGAGTGGCAACATGGGTCAACAAACT......................................................................................................................................... 26 0 2 0.50 1 0 0 0 0 0 0 0 0 0 1 0
...........................................................................................................................................................TCGACTCAGCTTTTGATCCTGAT........................................................................ 23 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TCGACTCAGCTTTTGATCCTGATCAAGAA.................................................................. 29 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................TCGACTCAGCTTTTGATCCTGATCA...................................................................... 25 0 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................TCGACTCAGCTTTTGATCCTGATC....................................................................... 24 0 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TACCTTATATGCTCGGAAATGCTT.................................... 24 2 8 0.38 3 0 0 3 0 0 0 0 0 0 0 0
........................................................................................................................................ATCTGCGAACATCGCCATT............................................................................................... 19 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................TTTCTGTCTGTTACTTAAA................ 19 2 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................GAATATATATACTTTATATGCTCGGAA.......................................... 27 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................ATATATATACTTTATATGCTCGGAAAC........................................ 27 0 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................................................................TCTTTCTGTCTGTTACTTAAAA............... 22 3 3 0.33 1 0 0 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................ACATACTTTATATGCTCGGAAACGCT..................................... 26 1 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................TTTGATCCTGATCAAGATTATATA............................................................ 24 1 19 0.26 5 1 0 4 0 0 0 0 0 0 0 0
..............................................................................................................................AGTCTCTTGAATCTGCGA.......................................................................................................... 18 2 4 0.25 1 0 0 0 0 0 1 0 0 0 0 0
.................................................................................................................................................................................TCAAGAATATCTATACCTTATATGCTCGGA........................................... 30 2 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................TATATACTTTATATGCT............................................... 17 0 4 0.25 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................TCGAGTAACAGTGGCCAGAT...................................................................................................................................................... 20 3 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................GAATATATATACTTTATATGCTCGGT........................................... 26 1 4 0.25 1 0 0 0 0 1 0 0 0 0 0 0
....................................................................................................................................................................................................ATATGCTCGGAAACGCT..................................... 17 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................TGGCAACATGGGTCAACAAACTTGCGC.................................................................................................................................... 27 0 20 0.20 4 0 2 0 0 1 1 0 0 0 0 0
...........................................................................................................................................TGCGTACATCACCAGATTGAC.......................................................................................... 21 3 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0
.........................................................................................AGTGGCAACATGGGTCAACAAA........................................................................................................................................... 22 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TACTTTATATGCCCGGAAACGCTTC................................... 25 1 5 0.20 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................TATGCTCGGAAACGCTTC................................... 18 0 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0
........................................................................................GAGTGGCAACATGGGT.................................................................................................................................................. 16 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0 0
................................................................................................................................................................TCAGCTGTTGATTCTGATCCAGAATATA.............................................................. 28 3 20 0.15 3 1 0 2 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................ATATATATACTTTATATGCTCGGAAAT........................................ 27 1 7 0.14 1 0 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................TTTGATCCTGATCAAGAATATATATACTT....................................................... 29 0 7 0.14 1 1 0 0 0 0 0 0 0 0 0 0
...........................................................................GGTGTTCGAGAAAGA................................................................................................................................................................ 15 1 15 0.13 2 0 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................GAATATCTATACTTCATATGCTCGGAAA......................................... 28 2 8 0.13 1 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................ATATATATACTTTATATGCTCGGAT.......................................... 25 1 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................ATATATAAACTTTATATGCTGGGA........................................... 24 2 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................TTTGATCCTGATCAAGAATATATAGACT........................................................ 28 1 9 0.11 1 1 0 0 0 0 0 0 0 0 0 0
......................................................................................................................TGCTGCTTTGTCTTTAGAATCT.............................................................................................................. 22 2 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................ATATATATACTTTATATGCTCGGATTC........................................ 27 2 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................ATATATATACTTTATATGCTCGGAAACA....................................... 28 1 10 0.10 1 0 0 0 0 1 0 0 0 0 0 0
............................................................................................................................TTTGTCTCTAGAATCCGCC........................................................................................................... 19 2 10 0.10 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................GAATATATATACTTTAGTCGC................................................ 21 3 20 0.10 2 0 0 2 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................TACCTTATATGCTCGGAGATGCTT.................................... 24 3 10 0.10 1 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................ATATATATACTTTATATGCTCGGATTT........................................ 27 3 20 0.10 2 0 0 0 0 2 0 0 0 0 0 0
...........................................................................................................................................................................TCCTGATCAAGAATATATATACTT....................................................... 24 0 20 0.10 2 0 0 0 0 0 0 0 0 0 2 0
.............................................................................................GCAACATGGGTCAACAAACTTGCGC.................................................................................................................................... 25 0 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................ATATATATACTTTATATGCTCGGAATT........................................ 27 2 14 0.07 1 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................ATATATATACTTTATATGCTCGGATAT........................................ 27 2 14 0.07 1 0 0 0 0 1 0 0 0 0 0 0
......................................................GTTCCTGAAAACGTTGAAAT................................................................................................................................................................................ 20 3 16 0.06 1 0 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................TTTGATCCTGTTCAAGAATATATA............................................................ 24 1 17 0.06 1 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................TTTTGATCCTGATCAAGATTATATA............................................................ 25 1 18 0.06 1 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................TTATGCTCGGAAACGCT..................................... 17 1 19 0.05 1 0 0 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................TCCTGATCAAGAATATATATACTTTATA................................................... 28 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0
.....................................................................................................................................................................TTTTGATCCTGATCA...................................................................... 15 0 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0
...........................................................................................TGGCAACATGGGTCAACAAACTTGC...................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................GAAATCGGTCTTCGAGT.................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0
......................................................CTTTCTAACAGGGTTGAA.................................................................................................................................................................................. 18 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................GCCAGATCGACTCGGCTTTTGATCCTGA......................................................................... 28 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................GAGAGGCTTCTTTCTGT............................ 17 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................TCCTGATCAAGAATATATATACTTTAT.................................................... 27 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................TTTGTCTCTAGAATCTG............................................................................................................. 17 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................TGGGTCAACAAACTTGCG..................................................................................................................................... 18 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TTGATCCTGATCAAGA................................................................... 16 0 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................ATATATATACTTTATATGCTCGGATTA........................................ 27 3 20 0.05 1 0 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................TGATCCTGATCAAGAATATATATACT........................................................ 26 0 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................TGGCAACATGGGTCAACAAACTT........................................................................................................................................ 23 0 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................CTTTGTCTCTAGAATC............................................................................................................... 16 0 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TACATGAGTAGATAGGGTGTTGGCTAACGTTGCTACCGACTTTTAATGTTCATCCAAAGATTTTCGCAACTTTACCCACAAGCTCATTCTCACCGTTGTACCCAGTTGTTTGAACGCGAAGACGAAACAGAGATCTTAGACGCTTGTAGCGGTCTAGCTGAGTCGAAAACTAGGACTAGTTCTTATATATATGAAATATACGAGCCTTTGCGAAGAAAGACAGACAATGAATGAAAAGTTGCTTAGATCA
***********************************************************************************************.................((((((((((....((.(((((((.(((((((.....))).)))).))..))))).)).....)).))))))))......********************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 M024
male body		 SRR902009
testis
...............................................................................................................................................................................................................TTGCGAAGAAAGACAGACAATGAAT.................. 25 0 1 28.00 28 26 0 1 0 0 1 0 0 0 0
.........................................................................................................................................AGACGCTTGTAGCGGTCTAGCTGAGT....................................................................................... 26 0 1 23.00 23 11 6 1 1 3 1 0 0 0 0
................................................................................................................................................................................................................TGCGAAGAAAGACAGACAATGAAT.................. 24 0 1 9.00 9 9 0 0 0 0 0 0 0 0 0
.......................................................................................................................AGACGAAACAGAGATCTTAGACGCT.......................................................................................................... 25 0 1 5.00 5 1 1 1 0 1 1 0 0 0 0
...............................................................................................................................................................................................................TTGCGAAGAAAGACAGA.......................... 17 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0
.......................................................................................................................AGACGAAACAGAGATCTTAGACGCTTGT....................................................................................................... 28 0 1 5.00 5 0 2 0 2 1 0 0 0 0 0
........................................................................................................................................TAGACGCTTGTAGCGGTCTAGCTGAGT....................................................................................... 27 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0
.............................................................................................................................AACAGAGATCTTAGACGCTTGTAGCGGT................................................................................................. 28 0 1 4.00 4 0 0 4 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................AGACAGACAATGAATGAAAAGTTGCTT...... 27 0 1 4.00 4 0 3 0 1 0 0 0 0 0 0
...............................................................................................................................................................................................................TTGCGAAGAAAGACAGACAA....................... 20 0 1 4.00 4 4 0 0 0 0 0 0 0 0 0
.......................................................................................................................AGACGAAACAGAGATCTTAGACGCTT......................................................................................................... 26 0 1 4.00 4 0 1 2 1 0 0 0 0 0 0
............................................................................................................................................CGCTTGTAGCGGTCTAGCTGAGTCGA.................................................................................... 26 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGAACGCGAAGACGAAACAGAGAT.................................................................................................................... 25 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................AAGAAAGACAGACAATGAATGAAAA............. 25 0 1 3.00 3 1 1 0 0 1 0 0 0 0 0
........................................................................................................................................................TCTAGCTGAGTCGAAAACTAGGAC.......................................................................... 24 0 1 3.00 3 0 3 0 0 0 0 0 0 0 0
.........................................................................................................................................................CTAGCTGAGTCGAAAACTAGGACTAGT...................................................................... 27 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
..............................................................................................................TGAACGCGAAGACGAAACAGAGATCTT................................................................................................................. 27 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
......................................................................................................................................................GGTCTAGCTGAGTCGAAAACTAGGAC.......................................................................... 26 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0
.........................................................................................................................................AGACGCTTGTAGCGGTCTAGCTG.......................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TTGCGAAGAAAGACAG........................... 16 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..................GTTGGCTAACGTTGCTACCGA................................................................................................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...............................................................................AAGCTCATTCTCACCGTTGTACCCAGT................................................................................................................................................ 27 0 1 2.00 2 0 0 0 0 2 0 0 0 0 0
......................................................................................................................AAGACGAAACAGAGATCTTAGACGCTTGT....................................................................................................... 29 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................CGAAGAAAGACAGACAATGAAT.................. 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..........................................................................................................................CGAAACAGAGATCTTAGACGCTTGTAG..................................................................................................... 27 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
...............................................................................................................................................TTGTAGCGGTCTAGCTGAGTCGAAA.................................................................................. 25 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TTGCGAAGAAAGACAGACAAT...................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
...............GGTGTTGGCTAACGTTGCTACCGACTT................................................................................................................................................................................................................ 27 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TTTGCGAAGAAAGACAGACAATGAAT.................. 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
..........................ACGTTGCTACCGACTTTTAATGTTCAT..................................................................................................................................................................................................... 27 0 1 2.00 2 0 1 0 0 0 0 0 1 0 0
...........................................................................CCACAAGCTCATTCTCACCGTTGT....................................................................................................................................................... 24 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0
.............AGGGTGTTGGCTAACGTTGCTACCGACT................................................................................................................................................................................................................. 28 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0
................................................................................................................................................................................................................TGCGAAGAAAGACAGACA........................ 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
........................................................................................................................................AAGACGCTTGTAGCGGTCTAGCTGAGT....................................................................................... 27 1 1 2.00 2 0 0 2 0 0 0 0 0 0 0
.............AGGGTGTTGGCTAACGTTGCTACCGA................................................................................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.......GTAGATAGGGTGTTGGCTAACGTT........................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AGAAAGACAGACAATGAATGAAAAGT........... 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.......................CTAACGTTGCTACCGACTTT............................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................CGCTTGTAGCGGTCTAGCTGAGT....................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................TAACGTTGCTACCGACTTTTAATGTTCAT..................................................................................................................................................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................GTTGGCTAACGTTGCTACCGACTT................................................................................................................................................................................................................ 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................GAGCCTTTGCGAAGAA................................. 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................TATAGAAAGACAGACAATGAATGAAAA............. 27 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................AGCGGTCTAGCTGAGTCGAAAACTAGGAC.......................................................................... 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
TACATGAGTAGATAGGGTGTT..................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................GACGAAACAGAGATCTTAGACGCTT......................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
..............................................................................................................................................CTTGTAGCGGTCTAGCTGAGTCGAAAA................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................CAAGACGCTTGTAGCGGTCTAGCTGAGT....................................................................................... 28 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0
....................TGGCTAACGTTGCTACCGACTTTTA............................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................TTTCGCAACTTTACCCACAAGCTCATTC................................................................................................................................................................. 28 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.......................................................................................................................AGACGAAACAGAGATCTTAGACGCTGGT....................................................................................................... 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CTTTGCGAAGAAAGACAGACAATGAAT.................. 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................ATATGAAATATACGAGCCTTTGCGA..................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............TGGGTGTTGGCTAACGTTGCTA....................................................................................................................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................ACCCACAAGCTCATTCTCACCGTTGT....................................................................................................................................................... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
................................................................................................................................................................................................................TGCGAAGAAAGACAGA.......................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................GAAGAAAGACAGACAATGAATGAAAA............. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................TTGAACGCGAAGACGAAACAGA....................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................CTAGCTGAGTCGAAAACTA.............................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................TTGAACGCGAAGACGAAACAGAGATCT.................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................GCGGTCTAGCTGAGTCGAAAACTAGGAC.......................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................AGCGGTCTAGCTGAGTCGAAAACTA.............................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................ACGCTTGTAGCGGTCTAGCTGAGT....................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................GTAGCGGTCTAGCTGAGT....................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................TTGTAGCGGTCTAGCTGAGTCGAA................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......GTAGATAGGGTGTTGG................................................................................................................................................................................................................................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................ACTTTACCCACAAGCTCAT................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................AACGCGAAGACGAAACAGAGAT.................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................AACAGAGATCTTAGACGCTTGTAGC.................................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................AGACGAAACAGAGATCTTAGACGC........................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................TGCGAAGAAAGACAGACAATGAATG................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............AGGGTGTTGGCTAACGTTGCTACCG.................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................................AAGACAGACAATGAATGAAAAGTTGCTT...... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
............................................................................................................................................CGCTTGTAGCGGTCTAGCTGAG........................................................................................ 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................TCGCAACTTTACCCACAAGCTCATT.................................................................................................................................................................. 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................GACGCTTGTAGCGGTCTAGCTGAGT....................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.....GAGTAGATAGGGTGTTGG................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................CTAGCTGAGTCGAAAACTAGGACTTGT...................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.ACATGAGTAGATAGGGTGTTGGCTAA............................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................CAGACGAAACAGAGATCTTAGACA............................................................................................................ 24 2 2 1.00 2 0 0 2 0 0 0 0 0 0 0
.......................................................................................................................AGACGAAACAGAGATCTTAGACGCTA......................................................................................................... 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................GTAGCGGTCTAGCTGAGTCGA.................................................................................... 21 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0
.....................................................................................................................................................................................................................AGAAAGACAGACAATGAATGAAAA............. 24 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................................................ACGAAACAGAGATCTTAGACGCT.......................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................GCGAAGAAAGACAGACAATGAAT.................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TTGCGAAGAAAGACAGACA........................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................TGAACGCGAAGACGAAACAGAG...................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................ACAGAGATCTTAGACGCTTGT....................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...............GGTGTTGGCTAACGTTGCTACCGAC.................................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......AGTAGATAGGGTGATGGCT................................................................................................................................................................................................................................. 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................CTAACGTTGCTACCGACTT................................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................CTAGCTGAGTCGAAAACTAGGACT......................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..................GTTGGCTAACGTTGCTACCGACTTTT.............................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............AGGGTGTTGGCTAACGTTGCTACCGACTT................................................................................................................................................................................................................ 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................................................................................TTGAACGCGAAGACGAAACA......................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................CTAGCTGAGTCGAAAACTAGGAC.......................................................................... 23 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...........ATAGGGTGTTGGCTAACGTTG.......................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TTCTAGCTGAGTCGAAAACTAGGAC.......................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............................................................................................................................................CGCTTGTAGCGGTCTAGCTGAGTCG..................................................................................... 25 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.........................................................................................................................................................................CTAGGACTAGTTCTTATATATATG......................................................... 24 0 20 0.85 17 0 0 0 0 0 0 17 0 0 0
.........................................................................................TCACCGTTGTACTCAGTTGTTTGAA........................................................................................................................................ 25 1 4 0.75 3 1 0 0 0 0 0 2 0 0 0
......................................................................................................................................................................AAACTAGGACTAGTTCTTATATATATG......................................................... 27 0 8 0.50 4 1 0 1 1 0 0 1 0 0 0
.........................................................................................................................ACGAAACAGAGATCTT................................................................................................................. 16 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................GACGAAACAGAGATCTTAGAC............................................................................................................. 21 0 2 0.50 1 0 0 1 0 0 0 0 0 0 0
...ATGAGTAGATAGGGTG....................................................................................................................................................................................................................................... 16 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................TTGCGAAGAAAGACA............................ 15 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................CTGAGTCGAAAACTAGGACTA........................................................................ 21 0 2 0.50 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................AAAACTAGGACTAGTTCTTATATATATG......................................................... 28 0 7 0.43 3 0 1 0 0 2 0 0 0 0 0
.....................................................................................................................................................CGGTCTAGCTGAGTCGA.................................................................................... 17 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................ATATATATGAAATATACGAGCCTTT......................................... 25 0 3 0.33 1 0 1 0 0 0 0 0 0 0 0
.........................................................................................TCACCGTTGTACCCAGTTGTTTGAA........................................................................................................................................ 25 0 3 0.33 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................CTTATATATATGAAATATACGAGCCT........................................... 26 0 3 0.33 1 1 0 0 0 0 0 0 0 0 0
........................................................................................TTCACCGTTGTACTCAGTTGTTTGAA........................................................................................................................................ 26 2 10 0.30 3 0 0 2 0 0 0 0 0 0 1
..............................................................................................................................ACAGAGATCTTAGAC............................................................................................................. 15 0 20 0.25 5 5 0 0 0 0 0 0 0 0 0
.........ATATAGGGTGATGGCT................................................................................................................................................................................................................................. 16 2 20 0.20 4 4 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................AAACTAGGACTAGTTCTAATATATATG......................................................... 27 1 10 0.20 2 0 1 0 1 0 0 0 0 0 0
......AGTGCATAGGGTGATGGCT................................................................................................................................................................................................................................. 19 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................TTTGCGAAGAAAGAC............................. 15 0 16 0.19 3 3 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................CGAAAACTAGGACTAGTTCTTATATAT............................................................ 27 0 11 0.18 2 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................AATGAAAAGTTGCTTAGATCA 21 0 6 0.17 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................CGAAAACTAGGACAAGTTCTTATATATATG......................................................... 30 1 7 0.14 1 0 0 0 0 1 0 0 0 0 0
...................................................................................................................................................................................TTCTTATAGATATGAAGTATACGAGCCT........................................... 28 2 7 0.14 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................AAAATTAGGACTAGTTCTTATATATATG......................................................... 28 1 10 0.10 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AGGACTAGTTCTTATATATATG......................................................... 22 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0
.......GTAGCTAGGGTGATGGCT................................................................................................................................................................................................................................. 18 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................TATCCGTTGTACTCAGTTGTTTGAA........................................................................................................................................ 25 3 20 0.10 2 0 0 2 0 0 0 0 0 0 0
............................................................................................................................................................................GGACTAGTTCTTATATATATGAAAT..................................................... 25 0 20 0.10 2 0 0 0 0 0 2 0 0 0 0
............................................................................................................................AAACAGAGATCTTAG............................................................................................................... 15 0 20 0.10 2 2 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................AATGGAAAGTTGCTTAGATCA 21 1 12 0.08 1 0 0 0 0 0 0 0 0 0 1
...........................................................................................................................................................AGCTGAGTCGAGAACTAGGACTAGT...................................................................... 25 1 12 0.08 1 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................................AAGGAAGACAGACAATGAATGAAAA............. 25 1 13 0.08 1 1 0 0 0 0 0 0 0 0 0
........................................................................................TTCACCGTTGTACACAGTTGTTTGAA........................................................................................................................................ 26 2 13 0.08 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................AAAACTAGGACTAGTTCTTATATATA........................................................... 26 0 13 0.08 1 0 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................AAACTAGGACTAGTTCTTATATATA........................................................... 25 0 14 0.07 1 0 0 0 0 0 0 1 0 0 0
...................................................................................................................................................................CGAAAACTAGGACTAGTTCTAATAT.............................................................. 25 1 15 0.07 1 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................................................AAAACTAGGACTAGTTCTT.................................................................. 19 0 17 0.06 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................AAACTACGACTAGTTATTATATATATG......................................................... 27 2 17 0.06 1 0 0 0 0 0 0 0 1 0 0
...............................................................................................................................................................................................................TTGCGAAGAAAGACAGACAATGTAT.................. 25 1 17 0.06 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................AATCTAGGACTAGTTCTTATATATA........................................................... 25 1 18 0.06 1 0 0 0 0 0 0 0 0 0 1
......................................................................................................................................................................................................................GAAAGACAGACAATGTATGAAAA............. 23 1 18 0.06 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................AGAAAGACAGGCAAT...................... 15 1 19 0.05 1 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................AAACTAGGACTAGTTCTCATATATA........................................................... 25 1 19 0.05 1 0 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................................................CTTTGCGAAGAAAGA.............................. 15 0 19 0.05 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................AAAATTAGGACTAGTTCTTA................................................................. 20 1 20 0.05 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................GGACTAGTTCTTATATATATGAA....................................................... 23 0 20 0.05 1 0 0 0 0 1 0 0 0 0 0
......................................................................................................................................................................AAAAAAGGTCTAGTTCTTATATATATG......................................................... 27 3 20 0.05 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................CACCGTTGTACCCAGTTGTTTGAA........................................................................................................................................ 24 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................CGGTCTAGCTGACTTGAAT.................................................................................. 19 3 20 0.05 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................AAACTAGGACTAGTTCTTGTATATGTGAA....................................................... 29 2 20 0.05 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................AATACTAGGGCTAGTTATTATATATA........................................................... 26 3 20 0.05 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................AATACTAGGACTAGTTCTTATATATA........................................................... 26 1 20 0.05 1 0 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................AAAACTAGGTCTAGTTCTTATATATATG......................................................... 28 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................TTATATATATGAAATATA.................................................. 18 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................CTAGGACTAGTTCTTATATATATGA........................................................ 25 0 20 0.05 1 0 0 1 0 0 0 0 0 0 0
.......................................................................................................................................................................AACTAGGACTAGTTCTTATATATAT.......................................................... 25 0 20 0.05 1 1 0 0 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 4:813053-813302 + dsi_5830 ATGTACT-CAT--CTATCCCACAACCGATTGCAA-----CGATGGCTGAAAATTACAA-----------------G-T---------------AG---GTTTCTA-AAAGCGTTGA-----------------------------------------------------------------------------------------------A------------------------------------------------------------------A-----------------------TGGGTGTTCGAGTAAGAGTGGCAACATGGGTCAACAAA---CT-TGCGCTTCTGCTTTGTCTCTAGAATCT---------------------------------------------------GCGAA-CATCGCCAGATCGACTCAGCTTTTGATCCTGATCAAGAATATATAT--ACTTTATAT-GCTCGGAAACGCTTCTTTCTGTCTGTTACTTACTTT-----T--CAACGAATCTAGT
droSec2 scaffold_40:66849-67025 + TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGTTGGAGTAAGAGTGGCAACATGGGTCAACAAA---CT-TGCGCTTCTGCTTTGTATCTAGAATCT---------------------------------------------------GCGAA-CATCGCCAGATCGACTCAGCTTTTGATCCTGATCAAGAATATATAT--ACTTTATAT-GGTCGGAAACGCTTCTTTCTGTCTGTTACTTACTTT-----T--CAACGAATCTAGT
dm3 chr3L:23202792-23203031 + AATAATTCC-------------------------------------GGA----------------AAATATAAAAAT----------------A----CTTTTCA-AAAGTT-----------------------------------------------------------------------------------------------TTGGG-----------------------------------------------------------------------------------TGGTTTGTGGGCGTTAGAGTGGGTGTGGCAAGATGGGACAACAAA---CT-TGCGCTGGT-CTATATCTCTAGATTCTGT------------ATGCTTAATTTCAACCTT----C----------------------GACTCAGATCCACTCAACGATTGATCCTGATCAAGAATATATAT--ATTTTATAT-GGTCGGAAACGCTTCATTCTGCCTGTTACATACTTC-----T--CAACTAATCTAGT
droEre2 scaffold_4770:907938-908138 - GAAAA---------------------------------------------------------------TATCGAAAC----------------A----AATTTTA-AAAGTGTTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------CGTGTTAGTT-----------------------TTAGT--GTTTTGCAACAT---TTAACAAA---CTTTGCGC------------TCTGGAATCTGC------------ATGCC----------------------------------TAA-TCTCGCCAGATCGACTCGGCTGTTGATCCTGATCAAGAATATATAT--ACTATATACTGGTCGGAAACGCTTCTTTCTGCCTGTTACATAGTTT-----T--CAACGAATCTAGT
droYak3 v2_chrUn_1152:2329-2606 - TATTACA--------------AGACCAA------------------------TACAAAAATGAAAAAATATCAAAAC----------------A----TTTTTTA-AAAGTGTGGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------CGTGGCAGTTTTG---GGCGGTTTG------------TGGGCGTGGCAACATGAATCGACAAA---CT-TGCGCGGCTTCTATGTCTCTGGAGTCTGT------------ATGCTTAATCT-AGCTTT----CATACGGACGGACAGACGGA-CATGGCCAGATCGACTCGGCTATTGATCCTGATCAAGAATATATAT--ACTTTATAT-GGTCGGAAACGTTTCCTTCTGCCTGTTACATACTTT-----T--CAACGAATCTAGT
droEug1 scf7180000407323:5987-6237 - CTAAC------------------------TCCA-------------------------------------------------------------------------------------------------------------------------------------------------------------A--------------------------------------------------------------------CAGTTCCTGAGATTTCCGCAAGTTAGTTTTT---TGTGATTTGTGGGCGTTAGAGTGGGCGTGGCAGGATCCTGTAATAAA---CT-TGCGCTGTCACGGGACCTCAAGAATAT------------TC----GT-----------ACGGACGGACGGACGGACAGACGGA-CATGGCTACATCGACTTCGCTATTGATCCTGATCCAGAATATATAT--ACATTATAG-GGTCGCAAACGCTACCTTCTATCTGTTACATACTTT-----T--CAACGAATCTAGT
droBia1 scf7180000302178:62026-62259 - CCAAT------------------------TGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------AGT-----GTA-----AC----------------------------------------------------------TGACAGGATCAAACATTCGATTATCAATATCGTTTTTTGGCGTTTGATTGGGCGTGGCACCTTGACGGAAAAAAACAAA-TCCAATTA--TCTAGCTTAAATAGTCATCCGACATCTCACC----AT-----------T----CATA------------------------------ATGACGCTTGTGTTTCTAATCAAGAATGTATAT--ACTTTATGG-GGTAGGAAAAGCTTCCTTCTACCTGTTACATACTCT-----T--AAACGAACCCACT
droTak1 scf7180000410491:23052-23312 + TCCCAT----------------TATTAATGGCGAATCGCCGTTGGCTGAAAATCATAG-----------------G-CGATTTT------------------CTT-GAATC---------------------------AATGGCGATTTTTTTTATGAGT------GTAGAATCAGCATGAA------------------------------------------------------GAATGTCAATCTTATAGCTTTTATAG---------------------------------------------------------------------------------------------------TTTCCGAGATCT----------CAGC----GT-----------T----CATA-----CGACAGACGGA-CATGGCTAGATCGACTCGGCTAGTGATCCTGATCATGAATATATAT--GGTTTATAG-GGTCGGAAACGCTTCCTTCTAGCTATTACATACTTT-----T--GCACGAATGCAAT
droEle1 scf7180000491111:46440-46655 + ATGAT------------------------TGAA--------------------------------AAATATTCAAAC----------------AGCCCAATTTTAAAAACTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---CGCGTTTTGTGGGCGTTGAAATGGGCGTGGTCACGTTTTGAAAGAAA---CT-TGTGCTCCGT------------------------------------------------------------AAGAATAACTAGA-CATGGCTAAATCGACTTGGCTATTGAGTCTGATCAAAAATATATATAAACTTTATAG-GTGCCGA----TTTCCTTCTTCTTTGTACAAACTTT-----T--TAACAAATACAAT
droRho1 scf7180000779840:3837-4034 + TAAAT-----------------------------------------------------------------------------------------------TTTTA-AAATCGTATA----TAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTGTGGGCGTTAAAGGGGGCGTGGCACCTTTTTGAAACAAA---CT-TGCGCTGCGT----------AGGAAC--------------------------------------------------T-TCTAACAATGGCTATATCGACTCGGCTAGTGACCCTGATCAAGAATATATAT--ACTTTATAG-GGTCGGAAACGCTTCCTTCTAGCTGTTACATACTTT-----T--GCACGAATACAAT
droFic1 scf7180000453714:2170-2329 - AGCTAAAAT--------------------GGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------ACA-----ATG-----AT---------------------------------GGACAGC---------------------------------------------------CCCTTTGCGT---------------------------------------------------------AGAAT----------------------------------------------CGGACAGACGTA-CATACTTATTTGGATTCTGATCGTGATGCTGATCAAGAATATATAT--ACTTTATTG-GGTCTGAGGTGTCTCCTTCACTGCGTTGCAAACTTC-----T--GACTAAAATTATA
droKik1 scf7180000302408:281829-282049 + AAATT-------------------------------------------------ATAG-----------------A-T---------------AA---GTTTTTAAGAAAAT-----------------------------------------------------------------------------------------------TTGAGTAAGCCGT---------------------------------------------------------TTTGTTAA--------------------ACGCAGA------AATCGCAATGCAGAACAG-------CTTTCCG--AA--TTGAATTTCATGCGTTTTTGGC-------------TGAGT--------------------------TATAAAT-TATGGCTAGATCGACTTGGCTGTTGATGCTGATCAAGAATATATAT--ACTTTATAG-GGTCGGAAACGTCTCCTTCACTGCGTTGTAAACTTC-----T--GACTGAAATTATA
droAna3 scaffold_10513:37239-37433 + AAAGT------------------------TGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAGATAGCTCTAAAATTGAG-----------------------------------------------------------------------------------AGACTAGTTTGCGTAGA------AACTGAC------------AAA---CA---------------------------G------------AC----GG-----------ATAGACAGACAGACGGACCGACGGA-CATGCTCATATCGACTCAGGAGATGATCCTGATCAAGAATATATAT--ACTTTAAAG-GGTCGGAGATGTCTCCTTCACTGCGTTGCACACTTT-----T--GACGAAAATCATA
droBip1 scf7180000394933:28110-28304 + AACGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTGCAAAGTTTCAAGTCGATAGCTTTAAAACTGAG-----------------------------------------------------------------------------------AGACTTGTTCGCGTAGA------AACAGACAGACG---------------------------------------------------------------------------------GACCGACGGACAGACGGA-CATGCTCATATCAACTCAGGAGGTGATCCTGATCAAGAATATATAT--ACTTTATAG-GGTCGGAGATGTCTCCTTCACTGCGTTGCACACTTT-----T--GACCAAAATTATA
dp5 XL_group3a:38367-38589 - ATTAGAA--------------------------------------------------------------------G-C---------------GA---ACTTGTAAAAAATGTA--TGTTTTGAAATACACTTGTAACAGTGGCA-------------------------T--------------------------------------------ATTACAGAAGTCTGGATA-CAAAATTTCGTTGCTCTATCTTTC------------------------------------------------------------------------------------------------------------ATAGT---------------------------------------------------CGACAGA-CATGCCTCAATCGACTCGGCTATTGATGTTGGTCCAGAATAGATAT--ACTTTATGG-GGTCGGAAACGCTTCCTTCTGGACGTTACACACATCCATTTCCACCACAAATCTAAT
droPer2 scaffold_18:416553-416740 - GGTTGCA--------------A-----------------------------TTTTTAA-----------------A-T---------------AC---ACTTCTA-ACAGTGT------------------------------GA-------------------------T--------------------------------------------ATCCCAGGAGACTGGATA-CAAAATTTGCTTTCTCAAGCTCTTATAG---------------------------------------------------------------------------------------------------TCTCTGGGATCT----------AGGC----TC-----------T----TA--------------------AAACTTAGATCGACTCGTCTTTTGATGCTTATCAAGAATATATGT--ACTTTATGG-GGTTGGAAATGCTTTCTTCTGGATGTTATTT--------------------------
droWil2 scf2_1100000004558:2678061-2678284 - AAACT---TAA--GTATCCCAAATTTGATTGTAA-TGGCAATAAACTGTGTAAGATAC-----------------T-CGAGTTT-----------------------------------------------------------------------------------------------------------------------------------ACTATGCGAATATACATACCAAAATTTGGCGGCTCTAG------------------------------------------------------------------------------------------------------------CTTCTGGGATCT----------ATGCATGTGT-----------------------------------T-CATTCGTGACTCGACTCGGCTGTTGACGCTGATCAACAATA--TAT--ACTTTATGG-GGTCGGAAAAGATTCCTTCTGCCTGTTACATACATT-----T--TGGAGACTTTAAT
droVir3 scaffold_12875:5880746-5880951 - CGTATATCCGGTGACGTTGCAAACCT--------------GTTGGCTAAA--TTCCAGAGAGAAAAAA----------------------------------CTC-GAGGT--G--TGTATTCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCTGTGCGCACTGGAG-----------ACACCCTTTAAAAAG----------CTGCGT---------------TT----AAATTTCAAA----AT-----------T---------------TCTGATGGA-CATGGCTATATCGACT------TTGATGCTGACCAAGAATATATAT--ACTTTATGG-GGTCAGAGATGCTTCAGTCTGCCTG--------------------------------
droMoj3 scaffold_6680:23973403-23973634 + GCTGCGC-CAT--CTAT--CAAAACTAAACGAA-----------------ACTAACAG-----------------C-TGATCTGATTCAACGAAT---GTTTCTA-GAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAATGTATGT----------GTGCACACG---CA-TACGATGCTGTTGTAGTTGCTGCACGT------------GCGTTTGT----------------------------------TA-AATGGCCAAATACATTCAGCTCGTCGCCCTGATCAAGAATATATAT--ACTTTGTGG-GGTCTGCCACGCCTCCTTCTGCCTGTTATATACATT-----T--CAACAAAACCATT
droGri2 scaffold_15203:4737293-4737580 + GTGGCATTTATTGCTATCGGAAATCTGAATGCAT-----CGATAATCGAGAAACGGAG-----------------G-CAGTTAT----------------CGATA-AAA-T---------------------------AAAGCAAACTTGATCTGCGCCTGGTATACGAGAACCTATATTCC------------------------------------------------------CAATTTGAAGTCTCTAGCTCTTATAG---------------------------------------------------------------------------------------------------TCTCTGAGATCT----------GCGT----GT-----------TCAGACAGACGGACGGACAGACGGA-CATGGCTATATCGACTTGCCTGTTGACACTGATCAAGAATATATAT--ACCGTATGG-GGTCGCAGATGCCTCCTTCTGCCTGTTACATACATT-----T--GCACAAAATCATT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATGTACT-CAT--CTATCCCACAACCGATTGCAA-----CGATGGCTGAAAATTACAA-----------------G-T---------------AG---GTTTCTA-AAAGCGTTGA-----------------------------------------------------------------------------------------------A------------------------------------------------------------------A-----------------------TGGGTGTTCGAGTAAGAGTGGCAACATGGGTCAACAAA---CT-TGCGCTTCTGCTTTGTCTCTAGAATCT---------------------------------------------------GCGAA-CATCGCCAGATCGACTCAGCTTTTGATCCTGATCAAGAATATATAT--ACTTTATAT-GCTCGGAAACGCTTCTTTCTGTCTGTTACTTACTTT-----T--CAACGAATCTAGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................................................................................................................................................................................................................................TGTCTCTAGAATCT---------------------------------------------------GCGAA-CATCGCCAGA.........................................................................................................29126.0026000000210500000000
.....................................................................................................................................................................................................................................................................................................................................................................TTTGTCTCTAGAATCT---------------------------------------------------GCGAA-CATCGC.............................................................................................................27120.0020002000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TGTCTCTAGAATCT---------------------------------------------------GCGAA-CATCGCCA...........................................................................................................27119.0019000000901000000000
....................................................................................................................................................................................................................................................................................................................................................................................T---------------------------------------------------GCGAA-CATCGCCAGATCGACTCAGC...............................................................................................26112.001200200020213020000
.......................................................................................................................................................................................................................................................................................................................................................................TGTCTCTAGAATCT---------------------------------------------------GCGAA-CATCGC.............................................................................................................25111.001100000030710000000
.......................................................................................................................................................................................................................................................................................................................................................................TGTCTCTAGAATCT---------------------------------------------------GCGAA-CATCGCC............................................................................................................2618.00800000040400000000
.......................................................................................................................................................................................................................................................................................................................................................................TGTCTCTAGAATCT---------------------------------------------------GCGAA-CATCGCCAG..........................................................................................................2817.00700000040300000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAT--ACTTTATAT-GCTCGGAAACGCT............................................2617.00700010050001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--ACTTTATAT-GCTCGGAAACGCTTCT.........................................2614.00400000010210000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTGTCTGTTACTTACTTT-----T--CAACGA.......2814.00400000010210000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACTCAGCTTTTGATCCTGATCAAGA.............................................................................2823.00600010050000000000
....................................................................................................................................................................................................................................................................................................................................................................................T---------------------------------------------------GCGAA-CATCGCCAGATCGACTCAGCT..............................................................................................2713.00300110000001000000
......................AACCGATTGCAA-----CGATGGCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00300000000002010000
..................CCACAACCGATTGCAA-----CGATGGCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200000000000020000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTTCTGTCTGTTACTTACT.......................2212.00200200000000000000
.....................................................TACAA-----------------G-T---------------AG---GTTTCTA-AAAGCGTTGA-----------------------------------------------------------------------------------------------A------------------------------------------------------------------A-----------------------...................................................................................................................................................................................................................................................2812.00200000000200000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTCTGTCTGTTACTTACTA......................2212.00200000010001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--ACTTTATAT-GCTCGGAAACGCTTCTT........................................2712.00200000010001000000
..................................................................................................................................................................................................................................................................................................................................................................................TCT---------------------------------------------------GCGAA-CATCGCCAGATCGACTCAGC...............................................................................................2812.00200000000010010000
.............................................................................................................................................................................................................................................................................................................................................CAACAAA---CT-TGCGCTTCTGCTTTGT.......................................................................................................................................................................................2512.00200100000000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAA-CATCGCCAGATCGACTC..................................................................................................2212.00200000000002000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--ACTTTATAT-GCTCGGAAACGCTTCTTT.......................................2812.00200000010000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGTCTGTTACTTACTTT-----T--CAACGA.......2712.00200000000200000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCTGTTACTTACTTT-----T--CAACGA.......2512.00200000020000000000
.............................................................................................................................................................................................................................................................................................................................................CAACAAA---CT-TGCGCTTCTGCTTT.........................................................................................................................................................................................2312.00200000000001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGACTCAGCTTTTGATCCTGAT..................................................................................2512.00200010000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAT--ACTTTATAT-GCTCGGAAACGCTTC..........................................2812.00200010000000100000
.............................................................................................................................................................................................................................................................................................................................................CAACAAA---CT-TGCGCTTCTGCTTTG........................................................................................................................................................................................2412.00200010000000010000
.............................TGCAA-----CGATGGCTGAAAATTACAA-----------------G-T---------------A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000000100010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATATATAT--ACTTTATAT-GCTCGGA..................................................2632.00600000000001050000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATAT--ACTTTATAT-GCTCGGA..................................................2431.67500100000200020000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--ACTTTATAT-GCTCGGAAACGCT............................................2321.50300000020010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--ACTTTATAT-GCTCGGAAACGCTTC..........................................2521.50300000020100000000
..................................................................................................................................................................................................................................................................................................................................................................................TCT---------------------------------------------------GCGAA-CATCGCCAGATCGACTC..................................................................................................2511.00100000000000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTCTGTCTGTTACTTA.........................1911.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGTTACTTACTTT-----T--CAACGAA......2511.00100000000010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTTCTGTCTGTTACTTACTTT-----T--C............2611.00100010000000000000
....................................................TTACAA-----------------G-T---------------AG---GTTTCTA-AAAGCGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAT-GCTCGGAAACGCTTCTT........................................2111.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT-GCTCGGAAACGCTTCTTTC......................................2211.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATAT--ACTTTATAT-GCTCGGAC.................................................2531.00300000000000030000
..................................................................................................................................................................................................................................................................................................................................................AA---CT-TGCGCTTCTGCTTTGTCTCT...................................................................................................................................................................................2411.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTTCTGTCTGTTACT...........................1811.00100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-GCTCGGAAACGCTTCTTTCTGTCTG................................2611.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................GAATCT---------------------------------------------------GCGAA-CATCGCA............................................................................................................1811.00100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................CTAGAATCT---------------------------------------------------GCGAA-CATCGCCAGA.........................................................................................................2411.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTGTCTGTTACTTA.........................1711.00100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATAT-GCTCGGAAACGCTTCTTT.......................................2511.00100000000100000000
..................................................................................................................................................................................................................................................................................................................................................AA---CT-TGCGCTTCTGCTTTGTCTCTA..................................................................................................................................................................................2511.00100000000001000000
.................................................AAATTACAA-----------------G-T---------------AG---GTTTCTA-A......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000010000
..................................................................................................................................................................................................................................................................................................................................................................TGCTTTGTCTCTAGAA...............................................................................................................................................................................1621.00200000000002000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCGGAAACGCTTCTTTCTGTC..................................2311.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................TCTAGAATCT---------------------------------------------------GCGAA-CATCGCCT...........................................................................................................2311.00100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAT-GCTCGGAAACGCTTCTTT.......................................2211.00100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................GTCTCTAGAATCT---------------------------------------------------GCGAA-CATCGCCAGA.........................................................................................................2811.00100000000100000000
..................................................................................................................................................................................................................................................................................................................................................AA---CT-TGCGCTTCTGCTTTGTCTC....................................................................................................................................................................................2311.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATAT--ACTTTATAT-GCTCGGAAACG..............................................2711.00100000000000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT-GCTCGGAAACGCTTCTTTCT.....................................2311.00100000000100000000
................................AA-----CGATGGCTGAAAATTACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................A-CATCGCCAGATCGACTCAGCTTT............................................................................................2411.00100000000001000000
......................................................................................................CTA-AAAGCGTTGA-----------------------------------------------------------------------------------------------A------------------------------------------------------------------A-----------------------TGGGTG.............................................................................................................................................................................................................................................2111.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................T---------------------------------------------------GCGAA-CATCGCCAGATCGACTCAGCTT.............................................................................................2811.00100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GAA-CATCGCCAGATCGACTCAGCTTT............................................................................................2611.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................TCTAGAATCT---------------------------------------------------GCGAA-CATCGCCAGAT........................................................................................................2611.00100000000001000000
..................................................................................................................................................................................................................................................................................................................................................AA---CT-TGCGCTTCTGCTTTGTCTCTAGA................................................................................................................................................................................2711.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................TGTCTCTAGAATCT---------------------------------------------------GCGAA-CATCGCCATGG........................................................................................................3011.00100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAT-GCTCGGAAACGCTTCTTTC......................................2411.00100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................CTCTAGAATCT---------------------------------------------------GCGAA-CA.................................................................................................................1811.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................TCTAGAATCT---------------------------------------------------GCGAA-CATCGCCAGATC.......................................................................................................2711.00100000000001000000
..................................................................................................................................................................................................................................................................................................................................................AA---CT-TGCGCTTCTGCTTTGTC......................................................................................................................................................................................2111.00100000000001000000
.................................A-----CGATGGCTGAAAATTACAA-----------------G-T---------------AG---G..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-GCTCGGAAACGCTTCTTTC......................................2111.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTCTGTCTGTTACTTACTTT-----T--CAACGA.......3011.00100000000100000000
...........................................................................................................................................................................................................................................................................................................................................................................TCTAGAATCT---------------------------------------------------GCGAA-CATCG..............................................................................................................2011.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................T---------------------------------------------------GCGAA-CATCGCCAGATCGACTCAG................................................................................................2511.00100000000000010000
.............................................................................................................................................................................................................................................................................................................................................CAACAAA---CT-TGCGCTTCTGCTTTGG.......................................................................................................................................................................................2511.00100100000000000000
.................................................................................................................................................................................................................................................................................................................................................................................ATCT---------------------------------------------------GCGAA-CATCGCCAGATCGACTC..................................................................................................2611.00100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCTGTTACTTACTTT-----T--CAACGA.......2611.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT-GCTCGGAAACGCTTCTTTCTGTC..................................2611.00100000000100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTCTGTCTGTTACT...........................1711.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATAT--ACTTTATAT-GCTCGGAA.................................................2531.00300000000000030000
...........................................................................................................................................................................................................................................................................................................................................................................TCTAGAATCT---------------------------------------------------GCGAA-CATCGCCAGA.........................................................................................................2511.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................TGTCTCTAGAATCT---------------------------------------------------GCGAA-CATCG..............................................................................................................2411.00100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAACGCTTCTTTCTGTCTGTTACT...........................2611.00100000000010000000
...................................................................................................................A-----------------------------------------------------------------------------------------------A------------------------------------------------------------------A-----------------------TGGGTGTTCGAGTAAGAG.................................................................................................................................................................................................................................2111.00100000000001000000
..............................................................................................................................................................................................................................................................................................................TGGGTGTTCGAGTAAGAGTGGCAACAT........................................................................................................................................................................................................................2711.00100000000001000000
...................................................................................................................................................................................................................A------------------------------------------------------------------A-----------------------TGGGTGTTCGAGTAAGAGT................................................................................................................................................................................................................................2111.00100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................TAGAATCT---------------------------------------------------GCGAA-CATCGCCT...........................................................................................................2111.00100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................T---------------------------------------------------GCGAA-CATCGCCAGA.........................................................................................................1611.00100000000001000000
............................TTGCAA-----CGATGGCTGAAAATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAT-GCTCGGAAACGCTTCTTTCTGTC..................................2811.00100000000100000000
.......................................................................................................................................................................................................................................................................................................................................................................TGTCTCTAGAATCT---------------------------------------------------GCGAA-CA.................................................................................................................2111.00100000000100000000
....................................................................................................................................................................................................................................................................................................................................................................................T---------------------------------------------------GCGAA-CATCGCCAGATCGACTC..................................................................................................2311.00100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAA-CATCGCCAGATCGACTCAGCTTT............................................................................................2811.00100000000001000000
..................CCACAACCGATTGCAA-----CGATGGCTGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
..............................................................................................................................................................................................................................................................................................................TGGGTGTTCGAGTAAGAGTGGCAACA.........................................................................................................................................................................................................................2611.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTCTGTCTGTTACTTAAA.......................2111.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGAAACGCTTCTTTCTGTCTGTTAC............................2711.00100000010000000000
.......................ACCGATTGCAA-----CGATGGCTGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTCTGTCTGTTACTTACT.......................2111.00100000000100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGACTCAGCTTTTGATCCTG....................................................................................2311.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAT-GCTCGGAAACGCTTCTTTC......................................2511.00100000000100000000
....................................................................................................................................................................................................................................................................................................................................................................................T---------------------------------------------------GCGAA-CATCGCCAGATCGACTCAGCTTT............................................................................................2911.00100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATATATAT--ACTTTATAT-GCTCGGAAA................................................2830.67200000000002000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATAT--ACTTTATAT-GCTCGGAAA................................................2630.67200000000000020000
.........................................................................................................................................................................................................................................................................................................................GTAAGAGTGGCAACATGGGTCA..................................................................................................................................................................................................................2220.50100000000001000000
..........................................................................................................................................................................................................................................................................................................................TAAGAGTGGCAACATGGGTCAACAAA---CT-.......................................................................................................................................................................................................2820.50100000000001000000
.........................................................................................................................................................................................................................................................................................................................GTAAGAGTGGCAACATGGGTCAACA...............................................................................................................................................................................................................2520.50100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAGCTTTTGATCCTGATC.................................................................................2020.50100000000001000000
............................................................................................................................................................................................................................................................................................................................AGAGTGGCAACATGGGTCAACAAA---CT-.......................................................................................................................................................................................................2620.50100000001000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACTCAGCTTTTGATCCTGAT..................................................................................2320.50100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACTCAGCTTTTGATCCTGATCAAGAA............................................................................2920.50100000010000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACTCAGCTTTTGATCCTGATCA................................................................................2520.50100000000000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACTCAGCTTTTGATCCTGATC.................................................................................2420.50100000000001000000
.................................................................................................................................................................................................................................................................................................................................................................................ATCT---------------------------------------------------GCGAA-CATCGCCATT.........................................................................................................1930.33100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTGTCTGTTACTTAAA.......................1930.33100000000000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATATATAT--ACTTTATAT-GCTCGGAA.................................................2730.33100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATAT--ACTTTATAT-GCTCGGAAAC...............................................2730.33100000000000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTTCTGTCTGTTACTTAAAA......................2230.33100000000000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAT--ACTTTATAT-GCT......................................................1740.25100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATATATAT--ACTTTATAT-GCTCGGT..................................................2640.25100000000000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAT-GCTCGGAAACGCT............................................1750.20100000000001000000
................................................................................................................................................................................................................................................................................................................................TGGCAACATGGGTCAACAAA---CT-TGCGC..................................................................................................................................................................................................27200.20400000000012010000
..............................................................................................................................................................................................................................................................................................................................AGTGGCAACATGGGTCAACAAA---..........................................................................................................................................................................................................2250.20100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT-GCTCGGAAACGCTTC..........................................1850.20100000000001000000
.............................................................................................................................................................................................................................................................................................................................GAGTGGCAACATGGGT....................................................................................................................................................................................................................1660.17100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATAT--ACTTTATAT-GCTCGGAAAT...............................................2770.14100000000000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATCCTGATCAAGAATATATAT--ACTT...............................................................2970.14100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATAT--ACTTTATAT-GCTCGGAT.................................................2580.13100000000000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATAT--ACTTTATAT-GCTCGGAAACA..............................................28100.10100000000000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATAT--ACTTTATAT-GCTCGGATTT...............................................27200.10200000000000020000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGATCAAGAATATATAT--ACTT...............................................................24200.10200000002000000000
..................................................................................................................................................................................................................................................................................................................................GCAACATGGGTCAACAAA---CT-TGCGC..................................................................................................................................................................................................25200.10200000000002000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATAT--ACTTTATAT-GCTCGGAATT...............................................27140.07100000000000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGATCAAGAATATATAT--ACTTTATA...........................................................28200.05100000000010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGATCCTGATCA................................................................................15200.05100000001000000000
................................................................................................................................................................................................................................................................................................................................TGGCAACATGGGTCAACAAA---CT-TGC....................................................................................................................................................................................................25200.05100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGATCAAGAATATATAT--ACTTTAT............................................................27200.05100000000010000000
.....................................................................................................................................................................................................................................................................................................................................................................TTTGTCTCTAGAATCT---------------------------------------------------G........................................................................................................................17200.05100000000001000000
........................................................................................................................................................................................................................................................................................................................................TGGGTCAACAAA---CT-TGCG...................................................................................................................................................................................................18200.05100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCCTGATCAAGA.............................................................................16200.05100000000010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATAT--ACTTTATAT-GCTCGGATTA...............................................27200.05100000000000010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCCTGATCAAGAATATATAT--ACT................................................................26200.05100010000000000000
................................................................................................................................................................................................................................................................................................................................TGGCAACATGGGTCAACAAA---CT-T......................................................................................................................................................................................................23200.05100000000000001000
....................................................................................................................................................................................................................................................................................................................................................................CTTTGTCTCTAGAATC.............................................................................................................................................................................16200.05100000000001000000
droSec2
TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGTTGGAGTAAGAGTGGCAACATGGGTCAACAAA---CT-TGCGCTTCTGCTTTGTATCTAGAATCT---------------------------------------------------GCGAA-CATCGCCAGATCGACTCAGCTTTTGATCCTGATCAAGAATATATAT--ACTTTATAT-GGTCGGAAACGCTTCTTTCTGTCTGTTACTTACTTT-----T--CAACGAATCTAGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAGATCGACTCAGCTTTTGATCCT.....................................................................................2711.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCTTTCTGTCTGTTACTTACT.......................2211.0010010
..................................................................................................................................................................................................................................................................................................................................................AA---CT-TGCGCTTCTGCTTTGTATCTAGA................................................................................................................................................................................2711.0011000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATAT--ACTTTATAT-GGTCGGA..................................................24200.1533000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATAT--ACTTTATAT-GGTCG....................................................22200.1020020
...................................................................................................................................................................................................................................................................................................................................CAACATGGGTCAACAAA---CT-TG.....................................................................................................................................................................................................21200.0511000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAT-GGTCGGAAACGCTTC..........................................21200.0510100
................................................................................................................................................................................................................................................................................................................................TGGCAACATGGGTCAACAAA---CT-TGCGC..................................................................................................................................................................................................27200.0510010
..................................................................................................................................................................................................................................................................................................................................GCAACATGGGTCAACAAA---CT-.......................................................................................................................................................................................................20200.0511000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATAT--ACTTTATAT-GGTCGGA..................................................23200.0511000
...................................................................................................................................................................................................................................................................................................................................CAACATGGGTCAACAAA---CT-TGCGC..................................................................................................................................................................................................24200.0511000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATCCTGATCAAGAATATATAT--ACTT...............................................................27200.0510010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATAT--ACTTTATAT-GGTCGG...................................................23200.0511000
dm3
AATAATTCC-------------------------------------GGA----------------AAATATAAAAAT----------------A----CTTTTCA-AAAGTT-----------------------------------------------------------------------------------------------TTGGG-----------------------------------------------------------------------------------TGGTTTGTGGGCGTTAGAGTGGGTGTGGCAAGATGGGACAACAAA---CT-TGCGCTGGT-CTATATCTCTAGATTCTGT------------ATGCTTAATTTCAACCTT----C----------------------GACTCAGATCCACTCAACGATTGATCCTGATCAAGAATATATAT--ATTTTATAT-GGTCGGAAACGCTTCATTCTGCCTGTTACATACTTC-----T--CAACTAATCTAGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAT-GGTCGGAAACGCTTCATTC......................................2536.33190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000301090010000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
......................................................................................................................................................................................................................................................................................................................................................................ATATCTCTAGATTCTGT------------ATGCTTAATT....................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................TATCTCTAGATTCTGT------------ATGCTT........................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGATCAAGAATATATAT--ATTT...............................................................2442.2590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000001000000000000000000000020001120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.......................................................................................................................................................................................................................................................................................................................................................................TATCTCTAGATTCTGT------------ATGCTTAATT....................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TCA-AAAGTT-----------------------------------------------------------------------------------------------TTGGG-----------------------------------------------------------------------------------TGGTTTG...................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT-GGTCGGAAACGCTTCATTCTGC...................................2532.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAT-GGTCGGAAACGCTTCATT.......................................2432.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTCTGCCTGTTACATACTTC-----T--CAACT........2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACGATTGATCCTGATCAAGAATA..........................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT-GGTCGGAAACGCTTCATTCTGCC..................................2631.6750000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000001000000000000010100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAT-GGTCGGAAACGCTTC..........................................21201.603200000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000100000000000000000000000000100020000000000000000000000300000000000000000000000000000000000000000000000000000000101000000000000000010000000220000100000000000101200000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAT-GGTCGGAAACGCTTCATTC......................................2431.3340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TCAACCTT----C----------------------GACTCAGATCCACTCAAC...............................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TGGGACAACAAA---CT-TGCGCTGGT-.............................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................A-AAAGTT-----------------------------------------------------------------------------------------------TTGGG-----------------------------------------------------------------------------------TGGTTTGTG.................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................T------------ATGCTTAATTTCAACCTT----C----------------------GACTCA...........................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TAATTCC-------------------------------------GGA----------------AAATATAAAAAT----------------A----CTTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACTCAACGATTGATCCTGATCAA...............................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TTGTGGGCGTTAGAGTGGGTGT................................................................................................................................................................................................................................2251.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000001000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TGT------------ATGCTTAATTTCAACCTT----C----------------------GAC..............................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................AACAAA---CT-TGCGCTGGT-CTATATCTC....................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATATATAT--ATTTTATAT-GGTCGGA..................................................2631.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................ATGCTTAATTTCAACCTT----C----------------------G................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................TTCA-AAAGTT-----------------------------------------------------------------------------------------------TTGGG-----------------------------------------------------------------------------------TGGTTTGTGGGC..............................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TCA-AAAGTT-----------------------------------------------------------------------------------------------TTGGG-----------------------------------------------------------------------------------TGGTTTGTG.................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTCTGCCTGTTACATACTTC-----T--CAAC.........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................AACCTT----C----------------------GACTCAGATCCACTCA.................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCATTCTGCCTGTTACATACTTC-----................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TAATTCC-------------------------------------GGA----------------AAATATAAAAAT----------------A----CTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGATCAAGAATATATAT--ATTTTA.............................................................2641.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010002010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................ATCTCTAGATTCTGT------------ATGCTTAAT.....................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGATTGATCCTGATCAAGAATA..........................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TGTGGCAAGATGGGACAACAAA---CT-TGC....................................................................................................................................................................................................2711.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................TGTGGGCGTTAGAGTGGGTG.................................................................................................................................................................................................................................2061.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200010001000000000000000000000000000000000000000000000000000000000000001000000000000000001000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................ATGCTTAATTTCAACCTT----C----------------------GA...............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAT-GGTCGGAAACGCTTCAA........................................2360.8350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................TGGGCGTTAGAGTGGGTGTGG..............................................................................................................................................................................................................................21100.8080000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000200000000000000000000000000000000000000000000000000120000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGATTGATCCTGATGT................................................................................1840.7530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................................................................TGGGCGTTAGAGTGGGTGTGGCA............................................................................................................................................................................................................................2380.7560000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGATCAAGAATATATAT--ATTTT..............................................................2540.7530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TTTGTGGGCGTTAGAGTGGGT..................................................................................................................................................................................................................................2140.7530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TTGTGGGCGTTAGAGTGGGT..................................................................................................................................................................................................................................2070.5740000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................TGGG-----------------------------------------------------------------------------------TGGTTTGTGGGCGTTAG.........................................................................................................................................................................................................................................2140.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGATCAAGAATATATAT--ATTTTATA...........................................................2840.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TTGTGGGCGTTAGAGTGGGTG.................................................................................................................................................................................................................................2160.5030000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................TGTGGGCGTTAGAGTGGGTGTGG..............................................................................................................................................................................................................................2340.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAT-GGTCGGAAACGCTTCATTCTGCCA.................................2920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................T-----------------------------------------------------------------------------------------------TTGGG-----------------------------------------------------------------------------------TGGTTTGTGGGC..............................................................................................................................................................................................................................................1870.4330000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TGGTTTGTGGGCGTTAGAGTGG....................................................................................................................................................................................................................................2250.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TTTGTGGGCGTTAGAGTGGG...................................................................................................................................................................................................................................20200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATAT-GGTCGGAAACGCTTC..........................................22200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000001000000000000000000001000000000000000210000000000000000000000010
..........................................................................................................................................................................................................................................................................................................TTTGTGGGCGTTAGAGTGG....................................................................................................................................................................................................................................19200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000300000000000000000000000000
..............................................................................................................TT-----------------------------------------------------------------------------------------------TTGGG-----------------------------------------------------------------------------------TGGTTTGTGGGCGTTAG.........................................................................................................................................................................................................................................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATTGATCCTGATCAAGAAT...........................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGCTTCATTCTGCCTGTTACATACT.......................2830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATTGATCCTGATCAAGAATATATA......................................................................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAT-GGTCGGAAACGCTTCATTCT.....................................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................GG-----------------------------------------------------------------------------------TGGTTTGTGGGCGTTAGAGTGG....................................................................................................................................................................................................................................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--ATTTTATAT-GGTCGGAAACG..............................................2160.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT--ATTTTATAT-GGTCGGAAACGCT............................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TTGGG-----------------------------------------------------------------------------------TGGTTTGTGGGCGTTA..........................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAT--ATTTTATAT-GGTCGGAAACGCT............................................2730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................TGGG-----------------------------------------------------------------------------------TGGTTTGTGGGCGTTAGAGT......................................................................................................................................................................................................................................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................GGTTTGTGGGCGTTAGAGTGG....................................................................................................................................................................................................................................21200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000200000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................GTTTGTGGGCGTTAGAGTGGG...................................................................................................................................................................................................................................21200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000010000000200000000000010000
...............................................................................................................................................................................................................TTGGG-----------------------------------------------------------------------------------TGGTTTGTGGGCG.............................................................................................................................................................................................................................................1870.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010000000000000000000000000
............................................................................................................................................................................................................................................................................................................TGTGGGCGTTAGAGTGGGT..................................................................................................................................................................................................................................1970.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000010000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGATCAAGAATATATAT--ATTTTA.............................................................2440.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTGATCCTGATCAAGA.............................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAT-GGTCGGAAACGCTTCAT........................................2340.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGATCAAGAATATATAT--ATTTTAT............................................................2740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................AGTT-----------------------------------------------------------------------------------------------TTGGG-----------------------------------------------------------------------------------TGGTTTGTGG................................................................................................................................................................................................................................................1980.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGATCAAGAATATATAT--ATTT...............................................................2540.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAT-GGTCGGAAACGCTTCA.........................................2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................GTGGGCGTTAGAGTGGGTGTG...............................................................................................................................................................................................................................2180.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TTTGTGGGCGTTAGAGTG.....................................................................................................................................................................................................................................18200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TGGTTTGTGGGCGTTAGAGT......................................................................................................................................................................................................................................2080.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................TGGG-----------------------------------------------------------------------------------TGGTTTGTGGGCGTTAGA........................................................................................................................................................................................................................................2240.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................GTGGGCGTTAGAGTGGGTGT................................................................................................................................................................................................................................2080.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................T-----------------------------------------------------------------------------------------------TTGGG-----------------------------------------------------------------------------------TGGTTTGTGGGCGT............................................................................................................................................................................................................................................2050.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................TGTGGGCGTTAGAGTGGGTGT................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................GTT-----------------------------------------------------------------------------------------------TTGGG-----------------------------------------------------------------------------------TGGTTTGTGGGCG.............................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................TGTGGGCGTTAGAGTGGGTGTG...............................................................................................................................................................................................................................2250.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................TGTGGGCGTTAGAGTGGG...................................................................................................................................................................................................................................18200.2040000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCAGATCCACTCAAGC..............................................................................................1850.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............................................................................................................AGTT-----------------------------------------------------------------------------------------------TTGGG-----------------------------------------------------------------------------------TGGTTTGTGGGCG.............................................................................................................................................................................................................................................2250.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--ATTTTATAT-GGTCGGAAACGCT............................................2360.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--ATTTTATAT-GGTCGGAAACGC.............................................2260.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................G-----------------------------------------------------------------------------------TGGTTTGTGGGCGTTAG.........................................................................................................................................................................................................................................1860.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................GTT-----------------------------------------------------------------------------------------------TTGGG-----------------------------------------------------------------------------------TGGTTTGTGGG...............................................................................................................................................................................................................................................1960.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAT-GGTCGGAAACGCT............................................19200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TTGGG-----------------------------------------------------------------------------------TGGTTTGTGGGC..............................................................................................................................................................................................................................................1770.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TT-----------------------------------------------------------------------------------------------TTGGG-----------------------------------------------------------------------------------TGGTTTGTGGG...............................................................................................................................................................................................................................................1870.1410000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGATCAAGAATATATAT--ATTTTATT...........................................................2870.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................GTT-----------------------------------------------------------------------------------------------TTGGG-----------------------------------------------------------------------------------TGGTTTGTGG................................................................................................................................................................................................................................................1880.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTATAT-GGTCGGAAACGC.............................................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
............................................................................................................................................................................................................................................................................................................TGTGGGCGTTAGAGTGG....................................................................................................................................................................................................................................17200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATAT-GGTCGGAAACGC.............................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATCCTGATCAAGAATAT.........................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TTTGTGGGCGTTAGAGT......................................................................................................................................................................................................................................17200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGATCAAGAATATATAT--...................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
droEre2
GAAAA---------------------------------------------------------------TATCGAAAC----------------A----AATTTTA-AAAGTGTTGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------CGTGTTAGTT-----------------------TTAGT--GTTTTGCAACAT---TTAACAAA---CTTTGCGC------------TCTGGAATCTGC------------ATGCC----------------------------------TAA-TCTCGCCAGATCGACTCGGCTGTTGATCCTGATCAAGAATATATAT--ACTATATACTGGTCGGAAACGCTTCTTTCTGCCTGTTACATAGTTT-----T--CAACGAATCTAGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
TATTACA--------------AGACCAA------------------------TACAAAAATGAAAAAATATCAAAAC----------------A----TTTTTTA-AAAGTGTGGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------CGTGGCAGTTTTG---GGCGGTTTG------------TGGGCGTGGCAACATGAATCGACAAA---CT-TGCGCGGCTTCTATGTCTCTGGAGTCTGT------------ATGCTTAATCT-AGCTTT----CATACGGACGGACAGACGGA-CATGGCCAGATCGACTCGGCTATTGATCCTGATCAAGAATATATAT--ACTTTATAT-GGTCGGAAACGTTTCCTTCTGCCTGTTACATACTTT-----T--CAACGAATCTAGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................TACGGACGGACAGACGGA-CATGGCC............................................................................................................25201.2525002500000000
................................................................................................................................................................................................................................................................................................................................TGGCAACATGAATCGACAAA---CT-TGCGCG.................................................................................................................................................................................................2850.20100100000000
........................................................................................................................................................................................................................................................................................................................................TGAATCGACAAA---CT-TGCGCGGC...............................................................................................................................................................................................2260.17101000000000
........................................................................................................................................................................................................................................................................................................................................TGAATCGACAAA---CT-TGCGCGG................................................................................................................................................................................................2160.17110000000000
.......................................................................................................................................................................................................................................................................................................................................................................TGTCTCTGGAGTCTGT------------ATGCTTAATC....................................................................................................................................................26200.15303000000000
.....................................................................................................TTTA-AAAGTGTGGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------CGTGGCA.....................................................................................................................................................................................................................................................................2180.13101000000000
...............................................................................................................................................................................................................................................................................................TTG---GGCGGTTTG------------TGGGCGTGGCT............................................................................................................................................................................................................................23200.10200200000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAT-GGTCGGAAACGTTTCCTTCTGCC..................................27200.05110000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--ACTTTATAT-GGTCGGAAACGTTTCC.........................................26200.05101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTATAT-GGTCGGAAACGTT............................................21200.05100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACTCGGCTATTGATCCTGATC.................................................................................23200.05101000000000
..........................................................................................................................................................................................................................................................................................................TTTG------------TGGGCGTGGCAACATGAATC...................................................................................................................................................................................................................24200.05101000000000
...............................................................................................................................................................................................................................................................................................TTG---GGCGGTTTG------------TGGGCGTGG..............................................................................................................................................................................................................................21200.05100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................ATACGGACGGACAGACGGA-CATGGC.............................................................................................................25200.05101000000000
droEug1
CTAAC------------------------TCCA-------------------------------------------------------------------------------------------------------------------------------------------------------------A--------------------------------------------------------------------CAGTTCCTGAGATTTCCGCAAGTTAGTTTTT---TGTGATTTGTGGGCGTTAGAGTGGGCGTGGCAGGATCCTGTAATAAA---CT-TGCGCTGTCACGGGACCTCAAGAATAT------------TC----GT-----------ACGGACGGACGGACGGACAGACGGA-CATGGCTACATCGACTTCGCTATTGATCCTGATCCAGAATATATAT--ACATTATAG-GGTCGCAAACGCTACCTTCTATCTGTTACATACTTT-----T--CAACGAATCTAGTSizeHit CountTotal NormTotal
No Reads
droBia1
CCAAT------------------------TGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------AGT-----GTA-----AC----------------------------------------------------------TGACAGGATCAAACATTCGATTATCAATATCGTTTTTTGGCGTTTGATTGGGCGTGGCACCTTGACGGAAAAAAACAAA-TCCAATTA--TCTAGCTTAAATAGTCATCCGACATCTCACC----AT-----------T----CATA------------------------------ATGACGCTTGTGTTTCTAATCAAGAATGTATAT--ACTTTATGG-GGTAGGAAAAGCTTCCTTCTACCTGTTACATACTCT-----T--AAACGAACCCACTSizeHit CountTotal NormTotal
No Reads
droTak1
TCCCAT----------------TATTAATGGCGAATCGCCGTTGGCTGAAAATCATAG-----------------G-CGATTTT------------------CTT-GAATC---------------------------AATGGCGATTTTTTTTATGAGT------GTAGAATCAGCATGAA------------------------------------------------------GAATGTCAATCTTATAGCTTTTATAG---------------------------------------------------------------------------------------------------TTTCCGAGATCT----------CAGC----GT-----------T----CATA-----CGACAGACGGA-CATGGCTAGATCGACTCGGCTAGTGATCCTGATCATGAATATATAT--GGTTTATAG-GGTCGGAAACGCTTCCTTCTAGCTATTACATACTTT-----T--GCACGAATGCAATSizeHit CountTotal NormTotal
No Reads
droEle1
ATGAT------------------------TGAA--------------------------------AAATATTCAAAC----------------AGCCCAATTTTAAAAACTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---CGCGTTTTGTGGGCGTTGAAATGGGCGTGGTCACGTTTTGAAAGAAA---CT-TGTGCTCCGT------------------------------------------------------------AAGAATAACTAGA-CATGGCTAAATCGACTTGGCTATTGAGTCTGATCAAAAATATATATAAACTTTATAG-GTGCCGA----TTTCCTTCTTCTTTGTACAAACTTT-----T--TAACAAATACAATSizeHit CountTotal NormTotal
No Reads
droRho1
TAAAT-----------------------------------------------------------------------------------------------TTTTA-AAATCGTATA----TAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGATTGTGGGCGTTAAAGGGGGCGTGGCACCTTTTTGAAACAAA---CT-TGCGCTGCGT----------AGGAAC--------------------------------------------------T-TCTAACAATGGCTATATCGACTCGGCTAGTGACCCTGATCAAGAATATATAT--ACTTTATAG-GGTCGGAAACGCTTCCTTCTAGCTGTTACATACTTT-----T--GCACGAATACAATSizeHit CountTotal NormTotal
No Reads
droFic1
AGCTAAAAT--------------------GGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------ACA-----ATG-----AT---------------------------------GGACAGC---------------------------------------------------CCCTTTGCGT---------------------------------------------------------AGAAT----------------------------------------------CGGACAGACGTA-CATACTTATTTGGATTCTGATCGTGATGCTGATCAAGAATATATAT--ACTTTATTG-GGTCTGAGGTGTCTCCTTCACTGCGTTGCAAACTTC-----T--GACTAAAATTATASizeHit CountTotal NormTotal
No Reads
droKik1
AAATT-------------------------------------------------ATAG-----------------A-T---------------AA---GTTTTTAAGAAAAT-----------------------------------------------------------------------------------------------TTGAGTAAGCCGT---------------------------------------------------------TTTGTTAA--------------------ACGCAGA------AATCGCAATGCAGAACAG-------CTTTCCG--AA--TTGAATTTCATGCGTTTTTGGC-------------TGAGT--------------------------TATAAAT-TATGGCTAGATCGACTTGGCTGTTGATGCTGATCAAGAATATATAT--ACTTTATAG-GGTCGGAAACGTCTCCTTCACTGCGTTGTAAACTTC-----T--GACTGAAATTATASizeHit CountTotal NormTotal
No Reads
droAna3
AAAGT------------------------TGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAGATAGCTCTAAAATTGAG-----------------------------------------------------------------------------------AGACTAGTTTGCGTAGA------AACTGAC------------AAA---CA---------------------------G------------AC----GG-----------ATAGACAGACAGACGGACCGACGGA-CATGCTCATATCGACTCAGGAGATGATCCTGATCAAGAATATATAT--ACTTTAAAG-GGTCGGAGATGTCTCCTTCACTGCGTTGCACACTTT-----T--GACGAAAATCATASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAT--ACTTTAAAG-GGTCGGAGATGT.............................................26201.40288191000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATAT--ACTTTAAAG-GGTCGGAGA................................................25200.90183141000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAT--ACTTTAAAG-GGTCGGAGATG..............................................25200.80161105000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAT--ACTTTAAAG-GGTCGGAGA................................................23200.408080000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATAT--ACTTTAAAG-GGTCGGAGAT...............................................26200.408170000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGAGATGTCTCCTTCACTGCGTTGC............................27200.357070000
...................................................................................................................................................................................................................G-----------------------------------------------------------------------------------AGACTAGTTTGCGTAGA------AAC................................................................................................................................................................................................................................21200.357700000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATAT--ACTTTAAAG-GGTCGGAGATG..............................................27200.306420000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAT--ACTTTAAAG-GGTCGGAGAT...............................................24200.306150000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAT--ACTTTAAAG-GGTCGGAGATGT.............................................25200.306231000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAG-GGTCGGAGATGTCTCCTTCA.....................................25200.204201010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT--ACTTTAAAG-GGTCGGAGATGTC............................................25200.204040000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AGACAGACGGACCGACGGA-CA.................................................................................................................21200.204010003
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT--ACTTTAAAG-GGTCGGAGATGT.............................................24200.204130000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAT--ACTTTAAAG-GGTCGGAGA................................................24200.204040000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAT--ACTTTAAAG-GGTCGGAGATG..............................................24200.153120000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAT--ACTTTAAAG-GGTCGGAGATGTC............................................27200.153120000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAT--ACTTTAAAG-GGTCGGAGATG..............................................26200.153300000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAT--ACTTTAAAG-GGTCGGAGAT...............................................25200.153120000
..............................................................................................................................................................................................................ATTGAG-----------------------------------------------------------------------------------AGACTAGTTTGCGTAGA------AAC................................................................................................................................................................................................................................26200.102020000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT--ACTTTAAAG-GGTCGGAGATG..............................................23200.102200000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATAT--ACTTTAAAG-GGTCGGAG.................................................24200.102020000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAT--ACTTTAAAG-GGTCGGAGATGTC............................................26200.102110000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAT--ACTTTAAAG-GGTCGGAGA................................................22200.102020000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATATATAT--ACTTTAAAG-GGTCGGA..................................................26200.102110000
................................................................................................................................................................................................................TGAG-----------------------------------------------------------------------------------AGACTAGTTTGCGTAGA------AACT...............................................................................................................................................................................................................................25200.102200000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTCATATCGACTCAGGAGA............................................................................................21200.102100001
........................................................................................................................................................................................................................................................................................................................................................................................................................ACAGACAGACGGACCGACGGA-...................................................................................................................21200.102200000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATCGACTCAGGAGATGAT........................................................................................21200.051010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAT--ACTTTAAAG-GGTCGGAGATGTCT...........................................27200.051010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAAAG-GGTCGGAGATGTCT...........................................21200.051000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGATCAAGAATATATAT--ACTTTAAC...........................................................28200.051100000
................................................................................................................................................................................................................TGAG-----------------------------------------------------------------------------------AGACTAGTTTGCGTAGA------AACTGA.............................................................................................................................................................................................................................27200.051100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGATGTCTCCTTCACTGCG................................22200.051100000
................................................................................................................................................................................................................TGAG-----------------------------------------------------------------------------------AGACTAGTTTGCGTAGA------AACTG..............................................................................................................................................................................................................................26200.051001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCTCATATCGACTCAGGAGA............................................................................................22200.051000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAT--ACTTTAAAG-GGTCGG...................................................20200.051100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAATATATAT--ACTTTAAAG-GGTCGG...................................................27200.051100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAAAG-GGTCGGAGATGTCTCCTTC......................................26200.051010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CATGCTCATATCGACTCAGGAGATGATCC......................................................................................29200.051100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCTCATATCGACTCAGGAGATGA.........................................................................................25200.051100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAG-GGTCGGAGATGTCTCC.........................................20200.051010000
...............................................................................................................................................................................................................TTGAG-----------------------------------------------------------------------------------AGACTAGTTTGCGTAGA------AAC................................................................................................................................................................................................................................25200.051100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAG-GGTCGGAGATGTCTCC.........................................21200.051100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAG-GGTCGGAGATGTCTCCTTC......................................23200.051100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAT--ACTTTAAAG-GGTCGGAGAT...............................................23200.051100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT--ACTTTAAAG-GGTCGGAGATGTCTCC.........................................27200.051100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCATATCGACTCAGGAGATGATCC......................................................................................25200.051010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATATATAT--ACTTTAAAG-GGTCGGAGA................................................28200.051100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAT--ACTTTAAAG-GGTCGGAG.................................................23200.051010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAG-GGTCGGAGATGTCTCCTTC......................................25200.051010000
............................................................................................................................................................................................................................................................................................................................................................................................................................ACAGACGGACCGACGGA-CA.................................................................................................................19200.051100000
........................................................................................................................................................................................................................................................................................................................................................................................................................ACAGACAGACGGACCGACGG.....................................................................................................................20200.051100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAT--ACTTTAAAG-GGTCGGA..................................................21200.051100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAAAG-GGTCGGAGATGTC............................................20200.051010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................A-CATGCTCATATCGACTCAGGAGA............................................................................................24200.051100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCCTTCACTGCGTTGCACACTTT-----T--G............27200.051001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAG-GGTCGGAGATGTCTCCTTC......................................24200.051100000
...............................................................................................................................................................................................................TTGAG-----------------------------------------------------------------------------------AGACTAGTTTGCGTAGA------AA.................................................................................................................................................................................................................................24200.051000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATATATAT--ACTTTAAAG-GGTCGG...................................................26200.051010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAG-GGTCGGAGATGTCTC..........................................21200.051010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAG-GGTCGGAGATGTCTCCTTCAC....................................24200.051001000
..........................................................................................................................................................................................................TAAAATTGAG-----------------------------------------------------------------------------------AGACTAGTTTGCGTA...........................................................................................................................................................................................................................................25200.051000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CATGCTCATATCGACTCAGGAGA............................................................................................23200.051100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAT--ACTTTAAAG-GGTCGGT..................................................21200.051010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAG-GGTCGGAGATGTCTCCC........................................23200.051010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................AGACGGACCGACGGA-CATGCT.............................................................................................................21200.051000001
..............................................................................................................................................................................................................ATTGAG-----------------------------------------------------------------------------------AGACTAGTTTGCGTA...........................................................................................................................................................................................................................................21200.051000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAT--ACTTTAAAG-GGTCGGAGATGT.............................................27200.051010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATATATAT--ACTTTAAAG-GGTC.....................................................24200.051010000
...................................................................................................................................................................................................................G-----------------------------------------------------------------------------------AGACTAGTTTGCGTAGA------AACT...............................................................................................................................................................................................................................22200.051100000
...........................................................................................................................................................................................................................................................................................................TAGTTTGCGTAGA------AACTGAC------------A...............................................................................................................................................................................................................21200.051100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCGACTCAGGAGATGA.........................................................................................18200.051100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAT--ACTTTAAAG-GGTCGGAG.................................................22200.051010000
droBip1
AACGGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTGCAAAGTTTCAAGTCGATAGCTTTAAAACTGAG-----------------------------------------------------------------------------------AGACTTGTTCGCGTAGA------AACAGACAGACG---------------------------------------------------------------------------------GACCGACGGACAGACGGA-CATGCTCATATCAACTCAGGAGGTGATCCTGATCAAGAATATATAT--ACTTTATAG-GGTCGGAGATGTCTCCTTCACTGCGTTGCACACTTT-----T--GACCAAAATTATASizeHit CountTotal NormTotal
No Reads
dp5
ATTAGAA--------------------------------------------------------------------G-C---------------GA---ACTTGTAAAAAATGTA--TGTTTTGAAATACACTTGTAACAGTGGCA-------------------------T--------------------------------------------ATTACAGAAGTCTGGATA-CAAAATTTCGTTGCTCTATCTTTC------------------------------------------------------------------------------------------------------------ATAGT---------------------------------------------------CGACAGA-CATGCCTCAATCGACTCGGCTATTGATGTTGGTCCAGAATAGATAT--ACTTTATGG-GGTCGGAAACGCTTCCTTCTGGACGTTACACACATCCATTTCCACCACAAATCTAATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................................................................................................................................................................................................................TTACAGAAGTCTGGATA-CAAAATT................................................................................................................................................................................................................................................................................................................2414.0040100000300
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGAAACGCTTCCTTCTGGACG................................23202.254504500000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATGTTGGTCCAGAATAGATAT--AC.................................................................2612.0020000000200
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGTTGGTCCAGAATAG.........................................................................1911.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGAAACGCTTCCTTCTGGACGT...............................24200.601201200000000
..........................................................................................................................................................................................................................ACAGAAGTCTGGATA-CAAAATT................................................................................................................................................................................................................................................................................................................22140.4360000000600
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCGACTCGGCTATTGAT........................................................................................20200.4080800000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAAACGCTTCCTTCTGGACGT...............................23200.2550500000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTATGG-GGTCGGAAAC...............................................19200.2040400000000
........................................................................................................................................................................................................................TTACAGAAGTCTGGATA-CAAAAT.................................................................................................................................................................................................................................................................................................................23110.1820000000020
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCGACTCGGCTATTGATGT......................................................................................22110.1820200000000
.............................................................................................................................................................................................................................GAAGTCTGGATA-CAAAATTTC..............................................................................................................................................................................................................................................................................................................21120.1720200000000
...................................................................................................................................................................................................................................TGGATA-CAAAATTTCGTTGCT........................................................................................................................................................................................................................................................................................................21190.1630300000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGACTCGGCTATTGA.........................................................................................17200.1530000000300
..................................................................................................................................................................................................................................CTGGATA-CAAAATTTCGTTGC.........................................................................................................................................................................................................................................................................................................21180.1120200000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATCGACTCGGCTATTG..........................................................................................19200.1020000000020
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGAAACGCTTCCTTCTGGACGTT..............................25200.1020200000000
........................................................................................................................................................................................................................TTACAGAAGTCTGGATA-CAAA...................................................................................................................................................................................................................................................................................................................21130.0810000000010
.............................................................................................................................................................................................................................GAAGTCTGGATA-CAAAATTT...............................................................................................................................................................................................................................................................................................................20170.0610100000000
....................................................................................................................................................................................................................................GGATA-CAAAATTTCGTTGCTC.......................................................................................................................................................................................................................................................................................................21180.0610100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT--ACTTTATGG-GGTCGGAAAC...............................................21200.0510000000010
.......................................................................................................................................................................................................................................TA-CAAAATTTCGTTGCTCTA.....................................................................................................................................................................................................................................................................................................20200.0510000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCTTCTGGACGTTACACAC........................21200.0510000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAAACGCTTCCTTCTGGACG................................22200.0510100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCGGAAACGCTTCCTTCTGGACG................................25200.0510100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACGCTTCCTTCTGGACG................................20200.0510100000000
...............................................................................................................................................................................................................................AGTCTGGATA-CAAAATTTCGT............................................................................................................................................................................................................................................................................................................21200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT--ACTTTATGG-GGTCGGA..................................................19200.0510000000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GG-GGTCGGAAACGCTTCCTTCTGGACG................................27200.0510000000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-GGTCGGAAACGCTTCCTTCTGGACGT...............................27200.0510000000010
droPer2
GGTTGCA--------------A-----------------------------TTTTTAA-----------------A-T---------------AC---ACTTCTA-ACAGTGT------------------------------GA-------------------------T--------------------------------------------ATCCCAGGAGACTGGATA-CAAAATTTGCTTTCTCAAGCTCTTATAG---------------------------------------------------------------------------------------------------TCTCTGGGATCT----------AGGC----TC-----------T----TA--------------------AAACTTAGATCGACTCGTCTTTTGATGCTTATCAAGAATATATGT--ACTTTATGG-GGTTGGAAATGCTTTCTTCTGGATGTTATTT--------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
AAACT---TAA--GTATCCCAAATTTGATTGTAA-TGGCAATAAACTGTGTAAGATAC-----------------T-CGAGTTT-----------------------------------------------------------------------------------------------------------------------------------ACTATGCGAATATACATACCAAAATTTGGCGGCTCTAG------------------------------------------------------------------------------------------------------------CTTCTGGGATCT----------ATGCATGTGT-----------------------------------T-CATTCGTGACTCGACTCGGCTGTTGACGCTGATCAACAATA--TAT--ACTTTATGG-GGTCGGAAAAGATTCCTTCTGCCTGTTACATACATT-----T--TGGAGACTTTAATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--TAT--ACTTTATGG-GGTCGGAAAAGA.............................................2560.17100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATTCCTTCTGCCTGTTACATACATT-----................28100.10101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATTCCTTCTGCCTGTTACATAC........................25110.09101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTACATACATT-----T--TGGAGACTTTAA.26110.09101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACATACATT-----T--TGGAGACTTT...23140.07100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATACATT-----T--TGGAGACTTTA..21150.07100100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATACATT-----T--TGGAGACTTTAA.21160.06100100
droVir3
CGTATATCCGGTGACGTTGCAAACCT--------------GTTGGCTAAA--TTCCAGAGAGAAAAAA----------------------------------CTC-GAGGT--G--TGTATTCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCTGTGCGCACTGGAG-----------ACACCCTTTAAAAAG----------CTGCGT---------------TT----AAATTTCAAA----AT-----------T---------------TCTGATGGA-CATGGCTATATCGACT------TTGATGCTGACCAAGAATATATAT--ACTTTATGG-GGTCAGAGATGCTTCAGTCTGCCTG--------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................GCAAACCT--------------GTTGGCTAAA--TTCCAGAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002001000000000000000000000000100000000000000000000000000000000000
..............................................................................................................T--G--TGTATTCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCTGTGCGCACTGG.........................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................GGT--G--TGTATTCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCTGTGCGC..............................................................................................................................................................................................................................................2311.001000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................TTTCAAA----AT-----------T---------------TCTGATGGA-CATGGCTA...........................................................................................................2711.001000000000000000000000000000000100000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................TTAAAAAG----------CTGCGT---------------TT----AAATTTCAAA----AT-----------T---------------.............................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................AAA----AT-----------T---------------TCTGATGGA-CATGGC.............................................................................................................2111.001000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGAATATATAT--ACTTTATGG-G........................................................24200.102000000000000000000000000000000020000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAGAATATATAT--ACTTTATGG-GGTC.....................................................27200.102000000000000000000000000000020000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATAT--ACTTTATGG-GGTCAGAG.................................................24200.051000000000000000000000000100000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATAT--ACTTTATGG-GGTCAGAGA................................................24200.051000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTATGG-GGTCAGAGAT...............................................19200.051000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATAT--ACTTTATGG-GGTCAGAGA................................................25200.051000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT--ACTTTATGG-GGTCAGAGATGCT............................................25200.051000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATGCTGACCAAGAATATA........................................................................21200.051000000000000000000000000000000000000000000000000000000000001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGAATATATAT--ACTTTATGG-GGTCA....................................................27200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
GCTGCGC-CAT--CTAT--CAAAACTAAACGAA-----------------ACTAACAG-----------------C-TGATCTGATTCAACGAAT---GTTTCTA-GAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAATGTATGT----------GTGCACACG---CA-TACGATGCTGTTGTAGTTGCTGCACGT------------GCGTTTGT----------------------------------TA-AATGGCCAAATACATTCAGCTCGTCGCCCTGATCAAGAATATATAT--ACTTTGTGG-GGTCTGCCACGCCTCCTTCTGCCTGTTATATACATT-----T--CAACAAAACCATTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGG-GGTCTGCCACGCCTCCTT.......................................25201.95390000390
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTGTGG-GGTCTGCCACGC.............................................21201.15232300000
..............................................................................................................................................................................................................................................................................................................................................................................TGCACGT------------GCGTTTGT----------------------------------TA-AATGGCCA...........................................................................................................2560.503200001
............................ACGAA-----------------ACTAACAG-----------------C-TGATCTGATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.331100000
..................................................................................................................................................................................................................................................................................................................................................CG---CA-TACGATGCTGTTGTAGT......................................................................................................................................................................................2130.331100000
..............................................................................................................T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAATGTATGT----------GTGCACACG---CA-.......................................................................................................................................................................................................24200.306600000
.....................................................................................................................................................................................................................................................................................................................TTGAATGTATGT----------GTGCACACG---CA-TAC....................................................................................................................................................................................................26200.306600000
..................................................................................................................................................................................................................................................................................................................................................................................CGT------------GCGTTTGT----------------------------------TA-AATGGCCA...........................................................................................................2160.171001000
..............................................................................................................T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAATGTATGT----------GTGCACACG---CA-TAC....................................................................................................................................................................................................27200.153300000
..........T--CTAT--CAAAACTAAACGAA-----------------ACTAACAG-----------------C-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2870.141100000
.............CTAT--CAAAACTAAACGAA-----------------ACTAACAG-----------------C-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2770.141100000
.......................................................................................................TA-GAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAATGTATGT----------GTGCAC................................................................................................................................................................................................................25180.112200000
...................................................................................................TTTCTA-GAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAATGTATGT----------GTGC..................................................................................................................................................................................................................27130.081010000
..............................................................................................T---GTTTCTA-GAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAATGTATGT----------G.....................................................................................................................................................................................................................26150.071100000
.....................................................................................................TCTA-GAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAATGTATGT----------GTGCA.................................................................................................................................................................................................................26170.061100000
.....................................................................................................TCTA-GAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAATGTATGT----------GTG...................................................................................................................................................................................................................24170.061010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATATACATT-----T--CAACAAAACCAT.24190.051100000
............................................................................................................................................................................................................................................................................................................................TATGT----------GTGCACACG---CA-TACGATGCTGT............................................................................................................................................................................................27200.051100000
......................AACTAAACGAA-----------------ACTAACAG-----------------C-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000010
......................................................................................................................................................................................................................................................................................................................TGAATGTATGT----------GTGCACACG---CA-TA.....................................................................................................................................................................................................24200.051100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTTCTGCCTGTTATATACA.......................21200.051100000
..............................................................................................................T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAATGTATGT----------GTGCACACG---CA-TACGA..................................................................................................................................................................................................29200.051100000
..........T--CTAT--CAAAACTAAACGAA-----------------ACTAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000010
...................CAAAACTAAACGAA-----------------ACTAACAG-----------------C-TGAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051100000
........................CTAAACGAA-----------------ACTAACAG-----------------C-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051100000
............................................................................................................................................................................................................................................................................................................................TATGT----------GTGCACACG---CA-TA.....................................................................................................................................................................................................18200.051100000
....CGC-CAT--CTAT--CAAAACTAAACGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000010
.......................................................................................................TA-GAAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAATGTATGT----------GT....................................................................................................................................................................................................................21200.051000001
droGri2
GTGGCATTTATTGCTATCGGAAATCTGAATGCAT-----CGATAATCGAGAAACGGAG-----------------G-CAGTTAT----------------CGATA-AAA-T---------------------------AAAGCAAACTTGATCTGCGCCTGGTATACGAGAACCTATATTCC------------------------------------------------------CAATTTGAAGTCTCTAGCTCTTATAG---------------------------------------------------------------------------------------------------TCTCTGAGATCT----------GCGT----GT-----------TCAGACAGACGGACGGACAGACGGA-CATGGCTATATCGACTTGCCTGTTGACACTGATCAAGAATATATAT--ACCGTATGG-GGTCGCAGATGCCTCCTTCTGCCTGTTACATACATT-----T--GCACAAAATCATTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTTCTGCCTGTTACATACATT-----T--.............24200.05110

Generated: 05/19/2015 at 05:22 AM