dsi_5816

CDS [2l_6501330_6502247_+]; exon [2l_6501330_6502247_+]; intron [2l_6500765_6501329_+]

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## TTTTACTTTCTAACTTTCGTTTAATATGTTTGAGGTTTTAAAGTTGTTGGAATGCAATGGGCACCTAAGTGTAGTTGGTATACAGGAGAATTTACTCACTATTAGCTTTCATTACTAAAACCAGAACTAACATTTTCCTCCGCCACTGATTAAACCGTGTGGACAAGTTCATTAAACTCGCTGGCTGAAACCATTTGCAGGCTCAAGAAAGACACGGTTCTGCAGAAGACCGCATCCGGGGACTGGAGAC ************************************************..((((((((((((....))))((((((((.....(((......)))..)))))))).............((((.............((...((((............))))...)).............))))......))).))))).************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M023 head	M024 male body	SRR553485 Chicharo_3 day-old ovaries	SRR618934 dsim w501 ovaries	SRR553488 RT_0-2 hours eggs	GSM343915 embryo	SRR553486 Makindu_3 day-old ovaries	SRR902009 testis	SRR553487 NRT_0-2 hours eggs	SRR1275487 Male larvae
.......................ATATGGTTGAGGTTGTA..................................................................................................................................................................................................................	17	2	20	1.75	35	0	0	7	15	4	0	4	3	2	0
......................................................................................................................................................................................................................................CGCATCCTGGGGCTGTAGAC	20	3	5	1.00	5	0	5	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................CACGGTTCTGCAGAAGAC....................	18	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0
................................................................................................CAGTATTAGCTATCATTAC.......................................................................................................................................	19	2	1	1.00	1	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................GACCGCATCCGGGGACTGGAGAC	23	0	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................ACGGTTCTGCAGAAGACC...................	18	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................GAAGACCGCATCCGGGGACTAGAGAC	26	1	1	1.00	1	1	0	0	0	0	0	0	0	0	0
..................GTTTAATATGTTTGA.........................................................................................................................................................................................................................	15	0	1	1.00	1	0	0	1	0	0	0	0	0	0	0
.......................ATATGTTTGAGGTTGTA..................................................................................................................................................................................................................	17	1	3	0.33	1	0	0	1	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................CGCATCCGGGGGCTGTAGTC	20	3	5	0.20	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................ATTAAACCGTTTCGACAA....................................................................................	18	2	10	0.20	2	0	2	0	0	0	0	0	0	0	0
...............................................................................................GCCCTATTATCTTTCATTACT......................................................................................................................................	21	3	6	0.17	1	0	0	0	0	0	1	0	0	0	0
......................................................................................................................................................................................................................................CGCATCCTGGGGCTGGAGTC	20	3	14	0.14	2	0	2	0	0	0	0	0	0	0	0
.........................................................................GTTGGCATACAGGAGAAA...............................................................................................................................................................	18	2	9	0.11	1	0	0	0	1	0	0	0	0	0	0
..........................TGTTTGAGGTTCTAA.................................................................................................................................................................................................................	15	1	10	0.10	1	0	0	0	0	1	0	0	0	0	0
.........................ATGGTTGAGGTTTTA..................................................................................................................................................................................................................	15	1	10	0.10	1	0	0	1	0	0	0	0	0	0	0
.......................ATATGTTTGAGGTTTGTA.................................................................................................................................................................................................................	18	2	20	0.10	2	0	0	0	0	0	2	0	0	0	0
.......................ATATGTTTGAGGGTT....................................................................................................................................................................................................................	15	1	11	0.09	1	0	0	0	0	0	0	0	0	0	1
.......................................................................................................................................................................................................................................GCATCCGGGGGCTGTAGTC	19	3	14	0.07	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................CGCATCCTGGGGCTGTAGA.	19	3	19	0.05	1	0	1	0	0	0	0	0	0	0	0
..................GTTTAATGTGTTTGA.........................................................................................................................................................................................................................	15	1	20	0.05	1	0	0	0	0	0	0	1	0	0	0
...................................................................................................................TAAAAGCAGAACTAA........................................................................................................................	15	1	20	0.05	1	0	0	0	1	0	0	0	0	0	0
........................TGTGTTTGAGGTTCTAA.................................................................................................................................................................................................................	17	2	20	0.05	1	0	0	0	1	0	0	0	0	0	0

AAAATGAAAGATTGAAAGCAAATTATACAAACTCCAAAATTTCAACAACCTTACGTTACCCGTGGATTCACATCAACCATATGTCCTCTTAAATGAGTGATAATCGAAAGTAATGATTTTGGTCTTGATTGTAAAAGGAGGCGGTGACTAATTTGGCACACCTGTTCAAGTAATTTGAGCGACCGACTTTGGTAAACGTCCGAGTTCTTTCTGTGCCAAGACGTCTTCTGGCGTAGGCCCCTGACCTCTG ************************************************..((((((((((((....))))((((((((.....(((......)))..)))))))).............((((.............((...((((............))))...)).............))))......))).))))).************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR553485 Chicharo_3 day-old ovaries	SRR553488 RT_0-2 hours eggs	SRR553487 NRT_0-2 hours eggs	SRR618934 dsim w501 ovaries	SRR553486 Makindu_3 day-old ovaries	GSM343915 embryo
...................................AAAATTTCAGCAACCTT......................................................................................................................................................................................................	17	1	4	0.25	1	0	1	0	0	0	0
............................................................................................................................................................................................................................ACGTCTCCTGGCGTAGGTAC..........	20	3	4	0.25	1	1	0	0	0	0	0
....TGAAAGAGTGAAAGCTAAGTA.................................................................................................................................................................................................................................	21	3	6	0.17	1	0	0	0	1	0	0
........AGATTGAAAGCAAGT...................................................................................................................................................................................................................................	15	1	9	0.11	1	0	0	0	0	1	0
................................................................................................................ATGATTTTTGTCTTG...........................................................................................................................	15	1	20	0.10	2	0	0	2	0	0	0
...........................................................................................................................................................................AATCTGAGCGACCGA................................................................	15	1	11	0.09	1	0	0	1	0	0	0
...ATGGAAGATTGAAAGCAAGA...................................................................................................................................................................................................................................	20	3	13	0.08	1	0	0	0	0	0	1
...........................................................................................................AAGTAATGATTTTGC................................................................................................................................	15	1	17	0.06	1	0	0	1	0	0	0
............................................................................................................................................................................................................TTTTTTTTCTGCCAAGACGT..........................	20	3	20	0.05	1	0	0	0	1	0	0

Species	Coordinate	ID	Alignment
droSim2	2l:6501130-6501379 +	dsi_5816	TTTTA-------------------------------------------------------CTTTCTAACTTTCGTTTAATATGTTT-GAGGTTTTAAAGTT-----------GTTGGAATGCAATGGG-----------------------------------------------------------CACCTA--AGTGTAGTTGGTATACAGGAG--AATTTACTCACT-ATTAGCTTTCATTA-CTAAAA-CCA-GAA---CTAACA---TTTTCC-T------CC---------------------------GCCACTGATTAAACCGTGTGGACAAGTTCATTAAACTCGC-TGGCTGA--------------AACCAT-TTGCAGGCTCAAGAAAGACACGGTTCTGCAGAAGACCGCATCCGGGGACTGGAGAC
droSec2	scaffold_3:2266353-2266602 +		TTTTA-------------------------------------------------------CTTTCTAACTTTCGTTTAAATTGTTT-GATGTTTTAATGTT-----------GTTGGAATTCAATGGG-----------------------------------------------------------CACCTA--TGTGTAGTTGGTATACAGGAG--AATTTACTCACT-ATTAGCTTTCATTA-CTAAAA-CCA-GAA---CTAACA---TTTTCC-T------CC---------------------------GCCACTGATTAAACCGTGTGGACAAGTTCATTAAACTCGC-TGGCTGA--------------AACCAT-TTGCAGGCTCAAGAAAGACACGGTTCTGCTGAAGACCGCATTCGGGGACTGGAGAC
dm3	chr2L:6727688-6727912 +		ATTT--------------------------------------------------------------------------------CT-TATGTTTTAATGTA-----------TTTGGATTGCAATGGG-----------------------------------------------------------TACCTA--AGTGTAGTTGGTATACAAGAG--AATATACTCACT-ATTAGCTTTCATTA-CTAAAA-CCA-GAA---CTAACA---TTTTCC-T------CC---------------------------GCCACTGATTAAACCGTGTGGACAAGTTCATTAAACTCGC-TGGCTGA--------------AACCAT-TTGCAGGCTCAAGAAAGACACGGTTCTGCAGAAGACCGCATCCGGGGACTGGAGAC
droEre2	scaffold_4929:15644111-15644358 +		TCTTA-------------------------------------------------------CTTTTTATCGAATTACTCTATTTCTT-GATTTCTCATTGTA-----------TTTTAAATGTAATGGG-----------------------------------------------------------TACTTA--A--GTAGTTGGTATACAAGAG--AATTTACTCACT-ATTAGCTTTCATTA-CTAAAA-CCC-AAA---CTAACA---TTTTCC-T------CC---------------------------GCCACTGATTAAACCTTGTGGACAAGATCATTAAACTCGC-TGGCTGA--------------AACCAT-TTGCAGGCTCAAGAAAGACACGGTTCTGCAGAAGACCGCATCCGCGGACTGGAGAC
droYak3	2L:6184008-6184255 -		TCTTA-------------------------------------------------------CTTTCCATTTAACTGTTAAATTTTTC-GTTTATTCATGGTA-----------TTTTAAATGTTATGGG-----------------------------------------------------------TACTTA--A--GTAGTTGGTATACAAGAG--AATTTGTTCACT-ATTAGCTTTCATTA-CTAAAA-CCC-GAA---CTAACA---TTTTCC-T------CC---------------------------GCCACTGATAAAACCTTGTGGACAAGTTCATTAAACTCGC-TGGCTGA--------------AACCAT-TTGCAGGCTCAAGAAAGACACGGTTCTGCCGAAGACCGCATCCGGGGACTGGAGAC
droEug1	scf7180000409463:47057-47253 -		AATTT-------------------------------------------------------CTTTTGATTATTC------------------------------------------------------------------------------------------------------------------------------TTATTGGTATACAAAAG--GGACCAGTCACA-TTTAGCTTTCATTA-CTAAAA-CCC-GAA---CTAACA---TCTTTC-A------CT---------------------------GCCACTGATAAAACCTTGTGAACAAGTTCATTAAACTCGC-TGGCTCA--------------AACCAT-TTGCAGGCTCAAGAAAGACACGGTTCTGCGGAAGACCGCATCCGTGGATTGGAGAC
droBia1	scf7180000302422:2486700-2486935 +		TTTTA-------------------------------------------------------TTTTTCATTATTTGTGTAACA--ATGAAGTATGT-------------------TTTTCATTATTTAAG-----------------------------------------------------------TTAC-----ATGTAGTTGGTATGCAAGAG--GACTTACTCACT-ATTAGCTTTCATAA-CTAAAC-CC---AA---CTAACA---TTTCTC-A------CT---------------------------GCCACTGATAAAACCTTGTGAACAAGATCATTAAACTCGC-TGGCTCA--------------AACCAT-TTGCAGGCTCAAGAGAGACACGGCTCTGCGGAAGACCGCATCCGGGGACTGGAGAC
droTak1	scf7180000415399:1447272-1447570 +		ATCTATTTAAAATATTATAACCTTTATAAATAAAGGTAACATATG------------------TTTAACTTCCCTTT---------------------------------TCTTCA-----TAATTAATTTGTTTTTGTTTTTTTTTTTATTACAAAAATTATGTTT--------------------TTCTCA----AGTAGTTGGTATACCAGAG--GGCTCACTCACT-ATTAGCTTTCATTA-CTAAAAACCC-GAA---CTAACA---TTTCCC-A------CT---------------------------GCCACTGCTAAAACCTTGTGAACAAGTTCATTAAAGTCGC-TGGCTCT--------------AAACAT-TTACAGGCTCAAGAGAGACACGGTTCGGCGGAAGACCGCATCCGGGGTCTGGAGAC
droEle1	scf7180000490640:399212-399390 +		T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTGGTATACATGGG--GGATCACTCACT-TTTAGCTTTCATTA-CCAAAA-CCC-AAA---CTAACC---CTGCTC-A------CT---------------------------GCCACTGATTGAACCTCGTGAACAAGCTCATTAAACTCGC-TGGCTCG--------------AACCCT-TTGCAGGCTCAAGAAAGACACGGCTCGGCGGAGGACCGCATCCGTGGCCTCGAAAC
droRho1	scf7180000779930:1524-1704 -		TA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGGTATACATGAG--GGATCACTCACT-TTTAGCTTTCATTA-CTAAAA-CCC-AAA---CTAACA---TTTCTC-A------CT---------------------------GCCACTGATTGAACCTCGTGAACAAGCTCATTAAACTCGC-TGGCTCG--------------AACCAT-TTGCAGGCTCAAGAAAGACACGGTTCAGCGGAGGACCGCATCCGGGGACTCGAAAC
droFic1	scf7180000453815:52785-53121 +		AATGA----------------------------AACCAACATCTGAAAGAAAAAAGAATATTTTCTAAAATTCCGTTAGGGTATAG-AATGTTTTAAAATAATTCCTTTTATTTTAAAATCCAATTAACTTGTTA-GGTAATACTTTTTACT---------AAGCCTATATTAAATGAATAATTAATTACCTATTATAGTAGTTGGTATACCTGAG--GGCTCACTCACT-ATTAGCTTTCATTA-CTAAAA-CCC-AAA---CTAATC---TC-TCC-A------CT---------------------------GCCAAACCCTAAACCTGAAGAACAAGCTCATTAAACTCGC-TGGCTCA---------------ACCAA-TTTCAGGCTCAAGAACGACATGGTTCGGCGGAAGACCGCATCCGGGGTCTTGAGAC
droKik1	scf7180000302468:436061-436256 -		AA--------------------------------------------------------------------------------------------------------------------------GAGG-----------------------------------------------------------CTCCTT--GGT---GTATGTATACA-GAG--GGACCACTCACT-TTTAGCTTTCATTA-CTAAAC-CCT-GAACTACTAACC---TCTCTC-A------TT------------------------C--GCCACTATTGTACACTCGAGAACAAGCTCATTAAACTCGC-TGGCTCA-------------AAACCAT-TTTCAGGCTCAAGAAAGACACGGTTCGGCGGAGGACCGCATCCGGGGATTGGAAAC
droAna3	scaffold_12916:6824-7002 -		T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTTGGAACACA-GAG--GCTTAATTTACT-ATTAGCTTTCATTA-CTAAAA-CCT-TTG---TTACCT---TTATTC-A-------T---------------------------ATTAAAAATTAAATGGAAAGAGCAAACTTAATGAACTGGC-TGGCCCA--------------ACCAAA-TTTCAGGCTCAAGAAAGACACGGTTCTGCCGAGGATCGTATCCGGGGACTTGAAAC
droBip1	scf7180000392937:59438-59674 -		TTTGG-------------------------------------------------------T---ATATTGAGTTATTATTACCTTT-AATTTGT-------------------CTTGAAATCCTTAAA-----------------------------------------------------------CAACTA---CTGTACTTGGTACTCA-GAG--GCCTCATTCACT-ATTAGCTTTCATTA-CTAAAA-CCT-TTA---TTACCT---TTCTTC--------AT---------------------------GTTAACATTTAAATGAAAAGAACAAACTTAATGAACTGGC-TGGCCCA--------------ACCAATATTTCAGGCTCAAGAAAGGCACGGTTCTGCCGAGGATCGCATCCGGGGACTTGAGAA
dp5	4_group1:3827152-3827214 +		--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------------AACCGC-TTTCAGGCTCAAGAGAGACATGGATCGGCGGAGGATCGTATACGGGGACTGGAAAC
droPer2	scaffold_5:1442989-1443152 -		GCACA-------------------------------------------------------ATTTTCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCTT-TTTAATTTTCGTTA-CAACAT-T---------------------------------TATGGCTTG---------TGGAATGTGA----TTTACTAAACATT------------------TTCTT-TGGCTCCGAAAACAAAAACCAAACCGC-TTTCAGGCTCAAGAGAGACATGGATCGGCGGAGGATCGTATACGGGGACTGGAAAC
droWil2	scf2_1100000004585:7337884-7337935 +		----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGCTCAGGAAAGACATGGGTCAGCTGAGGATCGCATACGAGGATTGGAGAA
droVir3	scaffold_12963:3353509-3353687 -		---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAA--ACTTTCCTCACT-CTTAGCTTTCATTAACTAACA-TTTACAA---CTAACTATCTTGTCTATCTATTATTATGGCCATTTAACTCGATTGAATATGC--------------------------TTTATTAAACGATTTGGGCTGA--------------ACACAT-TTGCAGGCTCAAGAACGTCATGGCTCGGCGGAGGATCGCATACGGGCATTGGAAAC
droMoj3	scaffold_6500:13725450-13725621 -		A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAAGAAA-ACTCCTCACA-TTTAGCTTTCATTA-CTAATA-CAA-ACA---CTAATT-T-GTTGTC-C------TTATGACGAGAGATACCCCTTGAATTTGC--------------------------ATTATTAAACGTGTTTGGCTGA---------------ACGCT-TTGCAGGCTCAAGAACGTCATGGCTCGGCGGAGGATCGCATACGGGGCTTGGAAGC
droGri2	scaffold_15252:2925295-2925460 -		AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCTCACTTTTTAGCTTTCATTA-CTAATA-CAA-AAA---CTAATT-TATTGTCT-A------TTGTGATCATTGAATCCTATTGAATAAAC--------------------------GTAATTAAATGAGTTTGGCTGA--------------ACGCA--TTACAGGCTCAAGAACGTCACGGTTCGGCGGAGGATCGCATTCGGGGCCTGGAGAC

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

TTTTA-------------------------------------------------------CTTTCTAACTTTCGTTTAATATGTTT-GAGGTTTTAAAGTT-----------GTTGGAATGCAATGGG-----------------------------------------------------------CACCTA--AGTGTAGTTGGTATACAGGAG--AATTTACTCACT-ATTAGCTTTCATTA-CTAAAA-CCA-GAA---CTAACA---TTTTCC-T------CC---------------------------GCCACTGATTAAACCGTGTGGACAAGTTCATTAAACTCGC-TGGCTGA--------------AACCAT-TTGCAGGCTCAAGAAAGACACGGTTCTGCAGAAGACCGCATCCGGGGACTGGAGAC	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
..................................................................................................................................................................................................................................................................................................................................................................................................................CACGGTTCTGCAGAAGAC....................	18	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................GACCGCATCCGGGGACTGGAGAC	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................ACGGTTCTGCAGAAGACC...................	18	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................GTTTAATATGTTT-GA...............................................................................................................................................................................................................................................................................................................................................................	15	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0

droSec2

TTTTA-------------------------------------------------------CTTTCTAACTTTCGTTTAAATTGTTT-GATGTTTTAATGTT-----------GTTGGAATTCAATGGG-----------------------------------------------------------CACCTA--TGTGTAGTTGGTATACAGGAG--AATTTACTCACT-ATTAGCTTTCATTA-CTAAAA-CCA-GAA---CTAACA---TTTTCC-T------CC---------------------------GCCACTGATTAAACCGTGTGGACAAGTTCATTAAACTCGC-TGGCTGA--------------AACCAT-TTGCAGGCTCAAGAAAGACACGGTTCTGCTGAAGACCGCATTCGGGGACTGGAGAC	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
No Reads

dm3

ATTT--------------------------------------------------------------------------------CT-TATGTTTTAATGTA-----------TTTGGATTGCAATGGG-----------------------------------------------------------TACCTA--AGTGTAGTTGGTATACAAGAG--AATATACTCACT-ATTAGCTTTCATTA-CTAAAA-CCA-GAA---CTAACA---TTTTCC-T------CC---------------------------GCCACTGATTAAACCGTGTGGACAAGTTCATTAAACTCGC-TGGCTGA--------------AACCAT-TTGCAGGCTCAAGAAAGACACGGTTCTGCAGAAGACCGCATCCGGGGACTGGAGAC	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
............................................................................................TTTAATGTA-----------TTTGGATTGCAA............................................................................................................................................................................................................................................................................................................................	21	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCATCCGGGGACTGGAGA.	20	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCGGGGACTGGAGAC	18	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................AGACCGCATCCGGGGACTGGAGA.	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................CACGGTTCTGCAGAAGAC....................	18	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCATCCGGGGACTGGAG..	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................GAAGACCGCATCCGGGGACTGGAGA.	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................AGGCTCAAGAAAGACACGGT................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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..........................................................................................................................AATGGG-----------------------------------------------------------TACCTA--AGTGTAGTTGGTG........................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................GACCGCATCCGGGGACTGGAGA.	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................AATGGG-----------------------------------------------------------TACCTA--AGTGTAGTTGGT.........................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................CTCAAGAAAGACACGGTTCTGCAGA........................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................CACGGTTCTGCAGAAGACCGC.................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................CACGGTTCTGCAGAAGACCGCATCCGG...........	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................ACGGTTCTGCAGAAGACCG..................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

TCTTA-------------------------------------------------------CTTTTTATCGAATTACTCTATTTCTT-GATTTCTCATTGTA-----------TTTTAAATGTAATGGG-----------------------------------------------------------TACTTA--A--GTAGTTGGTATACAAGAG--AATTTACTCACT-ATTAGCTTTCATTA-CTAAAA-CCC-AAA---CTAACA---TTTTCC-T------CC---------------------------GCCACTGATTAAACCTTGTGGACAAGATCATTAAACTCGC-TGGCTGA--------------AACCAT-TTGCAGGCTCAAGAAAGACACGGTTCTGCAGAAGACCGCATCCGCGGACTGGAGAC	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................CTGCAGAAGACCGCATCCGC...........	20	1	1.00	1	0	0	0	0	0	1	0

droYak3

TCTTA-------------------------------------------------------CTTTCCATTTAACTGTTAAATTTTTC-GTTTATTCATGGTA-----------TTTTAAATGTTATGGG-----------------------------------------------------------TACTTA--A--GTAGTTGGTATACAAGAG--AATTTGTTCACT-ATTAGCTTTCATTA-CTAAAA-CCC-GAA---CTAACA---TTTTCC-T------CC---------------------------GCCACTGATAAAACCTTGTGGACAAGTTCATTAAACTCGC-TGGCTGA--------------AACCAT-TTGCAGGCTCAAGAAAGACACGGTTCTGCCGAAGACCGCATCCGGGGACTGGAGAC	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGCCGAAGACCGCATCCGG...........	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0

droEug1

AATTT-------------------------------------------------------CTTTTGATTATTC------------------------------------------------------------------------------------------------------------------------------TTATTGGTATACAAAAG--GGACCAGTCACA-TTTAGCTTTCATTA-CTAAAA-CCC-GAA---CTAACA---TCTTTC-A------CT---------------------------GCCACTGATAAAACCTTGTGAACAAGTTCATTAAACTCGC-TGGCTCA--------------AACCAT-TTGCAGGCTCAAGAAAGACACGGTTCTGCGGAAGACCGCATCCGTGGATTGGAGAC	Size	Hit Count	Total Norm	Total
No Reads

droBia1

TTTTA-------------------------------------------------------TTTTTCATTATTTGTGTAACA--ATGAAGTATGT-------------------TTTTCATTATTTAAG-----------------------------------------------------------TTAC-----ATGTAGTTGGTATGCAAGAG--GACTTACTCACT-ATTAGCTTTCATAA-CTAAAC-CC---AA---CTAACA---TTTCTC-A------CT---------------------------GCCACTGATAAAACCTTGTGAACAAGATCATTAAACTCGC-TGGCTCA--------------AACCAT-TTGCAGGCTCAAGAGAGACACGGCTCTGCGGAAGACCGCATCCGGGGACTGGAGAC	Size	Hit Count	Total Norm	Total
No Reads

droTak1

ATCTATTTAAAATATTATAACCTTTATAAATAAAGGTAACATATG------------------TTTAACTTCCCTTT---------------------------------TCTTCA-----TAATTAATTTGTTTTTGTTTTTTTTTTTATTACAAAAATTATGTTT--------------------TTCTCA----AGTAGTTGGTATACCAGAG--GGCTCACTCACT-ATTAGCTTTCATTA-CTAAAAACCC-GAA---CTAACA---TTTCCC-A------CT---------------------------GCCACTGCTAAAACCTTGTGAACAAGTTCATTAAAGTCGC-TGGCTCT--------------AAACAT-TTACAGGCTCAAGAGAGACACGGTTCGGCGGAAGACCGCATCCGGGGTCTGGAGAC	Size	Hit Count	Total Norm	Total
No Reads

droEle1

T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTGGTATACATGGG--GGATCACTCACT-TTTAGCTTTCATTA-CCAAAA-CCC-AAA---CTAACC---CTGCTC-A------CT---------------------------GCCACTGATTGAACCTCGTGAACAAGCTCATTAAACTCGC-TGGCTCG--------------AACCCT-TTGCAGGCTCAAGAAAGACACGGCTCGGCGGAGGACCGCATCCGTGGCCTCGAAAC	Size	Hit Count	Total Norm	Total
No Reads

droRho1

TA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGGTATACATGAG--GGATCACTCACT-TTTAGCTTTCATTA-CTAAAA-CCC-AAA---CTAACA---TTTCTC-A------CT---------------------------GCCACTGATTGAACCTCGTGAACAAGCTCATTAAACTCGC-TGGCTCG--------------AACCAT-TTGCAGGCTCAAGAAAGACACGGTTCAGCGGAGGACCGCATCCGGGGACTCGAAAC	Size	Hit Count	Total Norm	Total
No Reads

droFic1

AATGA----------------------------AACCAACATCTGAAAGAAAAAAGAATATTTTCTAAAATTCCGTTAGGGTATAG-AATGTTTTAAAATAATTCCTTTTATTTTAAAATCCAATTAACTTGTTA-GGTAATACTTTTTACT---------AAGCCTATATTAAATGAATAATTAATTACCTATTATAGTAGTTGGTATACCTGAG--GGCTCACTCACT-ATTAGCTTTCATTA-CTAAAA-CCC-AAA---CTAATC---TC-TCC-A------CT---------------------------GCCAAACCCTAAACCTGAAGAACAAGCTCATTAAACTCGC-TGGCTCA---------------ACCAA-TTTCAGGCTCAAGAACGACATGGTTCGGCGGAAGACCGCATCCGGGGTCTTGAGAC	Size	Hit Count	Total Norm	Total
No Reads

droKik1

AA--------------------------------------------------------------------------------------------------------------------------GAGG-----------------------------------------------------------CTCCTT--GGT---GTATGTATACA-GAG--GGACCACTCACT-TTTAGCTTTCATTA-CTAAAC-CCT-GAACTACTAACC---TCTCTC-A------TT------------------------C--GCCACTATTGTACACTCGAGAACAAGCTCATTAAACTCGC-TGGCTCA-------------AAACCAT-TTTCAGGCTCAAGAAAGACACGGTTCGGCGGAGGACCGCATCCGGGGATTGGAAAC	Size	Hit Count	Total Norm	Total
No Reads

droAna3

T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTTGGAACACA-GAG--GCTTAATTTACT-ATTAGCTTTCATTA-CTAAAA-CCT-TTG---TTACCT---TTATTC-A-------T---------------------------ATTAAAAATTAAATGGAAAGAGCAAACTTAATGAACTGGC-TGGCCCA--------------ACCAAA-TTTCAGGCTCAAGAAAGACACGGTTCTGCCGAGGATCGTATCCGGGGACTTGAAAC	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
........................................................................................................................................................................................................................................................................................................................................................................................................TCAAGAAAGACACGGTTCTGCCGAGGA.....................	27	1	28.00	28	19	9	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................TAATGAACTGGC-TGGCCCA--------------ACCAAA-TT......................................................	27	1	17.00	17	14	3	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGGCTCAAGAAAGACACGGT................................	24	1	14.00	14	6	6	1	0	1	0
...................................................................................................................................................................................................................................................................................................................................................AACTTAATGAACTGGC-TGGCCCA--------------ACC............................................................	26	1	13.00	13	5	8	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................TCAAGAAAGACACGGTTCTGCCGAGG......................	26	1	12.00	12	11	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................TGGAAAGAGCAAACTTAATGAACTGGC-....................................................................................	27	1	12.00	12	3	9	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................TAATGAACTGGC-TGGCCCA--------------ACCAAA-........................................................	25	1	8.00	8	8	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................TCAAGAAAGACACGGTTCTGCCGAG.......................	25	1	8.00	8	6	2	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................TTAATGAACTGGC-TGGCCCA--------------ACCAAA-........................................................	26	1	7.00	7	7	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCCGAGGATCGTATCCGGGG.........	23	1	7.00	7	3	0	4	0	0	0
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTTGGAACACA-GAG--GCTTAATT......................................................................................................................................................................................................................	26	1	7.00	7	3	1	3	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGGCTCAAGAAAGACACGGTTCT.............................	27	1	6.00	6	2	4	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................TCAAGAAAGACACGGTTCTGCCGAGGAT....................	28	1	5.00	5	3	2	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................AACTTAATGAACTGGC-TGGCCCA--------------ACCAAA-........................................................	29	1	5.00	5	3	2	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAAGACACGGTTCTGCCGAGGAT....................	27	1	5.00	5	2	3	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................ACTTAATGAACTGGC-TGGCCCA--------------AC.............................................................	24	1	4.00	4	3	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................TCAGGCTCAAGAAAGACACGGTTCTGCC..........................	28	1	4.00	4	0	4	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGGCTCAAGAAAGACACGGC................................	24	1	4.00	4	0	4	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................GAGCAAACTTAATGAACTGGC-TGGCCC..............................................................................	27	1	4.00	4	2	2	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGAGGATCGTATCCGGGGACTTG....	26	1	4.00	4	4	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................AGCAAACTTAATGAACTGGC-TGGCCC..............................................................................	26	1	4.00	4	0	4	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................TAATGAACTGGC-TGGCCCA--------------ACCAAA-TTT.....................................................	28	1	4.00	4	4	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................TCAGGCTCAAGAAAGACACGGTTCT.............................	25	1	4.00	4	0	4	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................TGGAAAGAGCAAACTTAATGAACTGG......................................................................................	26	1	4.00	4	4	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCCGAGGATCGTATCCGGG..........	22	1	3.00	3	1	1	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................GGCTCAAGAAAGACACGGTTCTGCCGAG.......................	28	1	3.00	3	2	0	1	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAAGACACGGTTCTGCCGAGG......................	25	1	3.00	3	3	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCCGAGGATCGTATCCGGGGA........	24	1	3.00	3	2	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................GGAAAGAGCAAACTTAATGAACTGGC-....................................................................................	26	1	3.00	3	2	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAAGACACGGTTCTGCCGAG.......................	24	1	3.00	3	1	2	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAAGACACGGTTCTGCCGAGGA.....................	26	1	3.00	3	1	2	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................TTAATGAACTGGC-TGGCCCA--------------ACCAAA-T.......................................................	27	1	3.00	3	2	1	0	0	0	0
..........................................................................................................................................................................................................TTGGAACACA-GAG--GCTTAATTTACT-AT...............................................................................................................................................................................................................	27	1	3.00	3	2	1	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................ACTTAATGAACTGGC-TGGCCCA--------------ACC............................................................	25	1	3.00	3	2	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................AAGAAAGACACGGTTCTGCCGAGGAT....................	26	1	3.00	3	1	2	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TTCAGGCTCAAGAAAGACACGGTTC..............................	25	1	3.00	3	2	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGGCTCAAGAAAGACACGGTTC..............................	26	1	3.00	3	2	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................GAAAGAGCAAACTTAATGAACTGGC-TGG.................................................................................	28	1	3.00	3	3	0	0	0	0	0
.........................................................................................................................................................................................................................................TAGCTTTCATTA-CTAAAA-CCT-TTG---T................................................................................................................................................................................	25	1	2.00	2	2	0	0	0	0	0
.........................................................................................................................................................................................................TTTGGAACACA-GAG--GCTTAATTTACT-AT...............................................................................................................................................................................................................	28	1	2.00	2	2	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................TAAATGGAAAGAGCAAACTTAATGAAC.........................................................................................	27	1	2.00	2	1	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................TGGC-TGGCCCA--------------ACCAAA-TTTCAGG.................................................	24	1	2.00	2	2	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................AACTTAATGAACTGGC-TGGCCCA--------------AC.............................................................	25	1	2.00	2	2	0	0	0	0	0
..........................................................................................................................................................................................................TTGGAACACA-GAG--GCTTAATT......................................................................................................................................................................................................................	21	1	2.00	2	1	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................AGCAAACTTAATGAACTGGC-TGGCC...............................................................................	25	1	2.00	2	1	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCCGAGGATCGTATCCGGGGACT......	26	1	2.00	2	1	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................T---------------------------ATTAAAAATTAAATGGAAAGAGCA.....................................................................................................	25	1	2.00	2	1	1	0	0	0	0
.......................................................................................................................................................................................................TATTTGGAACACA-GAG--GCTTAATTTAC...................................................................................................................................................................................................................	27	1	2.00	2	0	0	2	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................GGCTCAAGAAAGACACGGTTCTGC...........................	24	1	2.00	2	1	1	0	0	0	0
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTTGGAACACA-GAG--GCTTAAT.......................................................................................................................................................................................................................	25	1	2.00	2	1	0	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................................GAAAGAGCAAACTTAATGAACTGGC-....................................................................................	25	1	2.00	2	1	1	0	0	0	0
...............................................................................................................................................................................................................................................TCATTA-CTAAAA-CCT-TTG---TTACCT---TTA.....................................................................................................................................................................	27	1	2.00	2	1	1	0	0	0	0
.........................................................................................................................................................................................................TTTGGAACACA-GAG--GCTTAATTTACT-A................................................................................................................................................................................................................	27	1	2.00	2	1	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................TGGAAAGAGCAAACTTAATGAACTGGC-T...................................................................................	28	1	2.00	2	1	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................GAGCAAACTTAATGAACTGGC-TGG.................................................................................	24	1	2.00	2	2	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGCCGAGGATCGTATCCGGGG.........	25	1	2.00	2	0	1	1	0	0	0
...............................................................................................................................................................................................................ACACA-GAG--GCTTAATTTACT-ATTAGC...........................................................................................................................................................................................................	26	1	2.00	2	0	2	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................TTAATGAACTGGC-TGGCCCA--------------ACCAAA-TT......................................................	28	1	2.00	2	2	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................TAAAAATTAAATGGAAAGAGCAAACT.................................................................................................	26	1	2.00	2	0	2	0	0	0	0
..............................................................................................................................................................................................................AACACA-GAG--GCTTAATTTACT-ATTAGCT..........................................................................................................................................................................................................	28	1	2.00	2	0	2	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................TGAACTGGC-TGGCCCA--------------ACCAAA-TTTCAG..................................................	28	1	2.00	2	2	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................TAATGAACTGGC-TGGCCCA--------------ACCAAA-T.......................................................	26	1	2.00	2	1	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGGCTCAAGAAAGACACGGTT...............................	25	1	2.00	2	2	0	0	0	0	0
...............................................................................................................................................................................................................................................TCATTA-CTAAAA-CCT-TTG---TTACCT---T.......................................................................................................................................................................	25	1	2.00	2	0	2	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGAGGATCGTATCCGGGGACTT.....	25	1	2.00	2	2	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................AATGAACTGGC-TGGCCCA--------------ACCAAA-TT......................................................	26	1	2.00	2	2	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................AAGAAAGACACGGTTCTGCCGAGGATCG..................	28	1	2.00	2	0	2	0	0	0	0
.......................................................................................................................................................................................................TATTTGGAACACA-GAG--GCTTAATT......................................................................................................................................................................................................................	24	1	2.00	2	0	1	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................AACTTAATGAACTGGC-TGGCCCA--------------...............................................................	23	1	2.00	2	2	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGCCGAGGATCGTATCCGGG..........	23	1	2.00	2	0	0	2	0	0	0
...............................................................................................................................................................................................................................................................................................................................................AGCAAACTTAATGAACTGGC-TGGCCCT--------------...............................................................	27	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGGCTCAAGAAAGACACGGTTCTGC...........................	29	1	1.00	1	0	1	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TTCAGGCTCAAGAAAGACACGG.................................	22	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................AGGCTCAAGAAAGACACGGTTCT.............................	23	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................TAATTTACT-ATTAGCTTTCATTA-CT................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................AA-TTTCAGGCTCAAGAAAGACACGGT................................	26	1	1.00	1	0	0	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................TAAAAATTAAATGGAAAGAGCAAACTT................................................................................................	27	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................AGCAAACTTAATGAACTGGC-TGGCCCA--------------AC.............................................................	29	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................................................................................TATTTGGAACACA-GAG--GCTTAA........................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
...........................................................................................................................................................................................................TGGAACACA-GAG--GCTTAATTTACT-AT...............................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................TGGCCCA--------------ACCAAA-TTTCAGGCTCAAGAA.........................................	28	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................AACTTAATGAACTGGC-TGGCCCG--------------...............................................................	23	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................TTAATGAACTGGC-TGGCC...............................................................................	18	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................ACTGGC-TGGCCCA--------------ACCAAA-TTTCAGGC................................................	27	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................GTATTTGGAACACA-GAG--GCTTAATT......................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................ACCAAA-TTTCAGGCTCAAGAAAGACA....................................	26	1	1.00	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGAGGATCGTATCCGGGG.........	21	1	1.00	1	0	0	1	0	0	0
....................................................................................................................................................................................................................................................................................TC-A-------T---------------------------ATTAAAAATTAAATGGAAAGAG.......................................................................................................	26	1	1.00	1	0	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................AAACTTAATGAACTGGC-TGGCCCA--------------ACC............................................................	27	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................................TCATTA-CTAAAA-CCT-TTG---TTACCT---TT......................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................AGCAAACTTAATGAACTGGC-TGGC................................................................................	24	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................ATTAAATGGAAAGAGCAAACTTAATG............................................................................................	26	1	1.00	1	0	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCCGAGGATCGTATCCGGGGAC.......	25	1	1.00	1	1	0	0	0	0	0
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTTGGAACACA-GAG--GCTTAATC......................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................GCCGAGGATCGTATCCGGGGACTTG....	25	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................TTCTGCCGAGGATCGTATCCGGGG.........	24	1	1.00	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................A--------------ACCAAA-TTTCAGGCTCAAGAAAGACAC...................................	28	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TTCAGGCTCAAGAAAGACACGGTTCTGC...........................	28	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................AGCAAACTTAATGAACTGGC-TGGCCCA--------------...............................................................	27	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................CAGGCTCAAGAAAGACACGGTTCTGCC..........................	27	1	1.00	1	0	1	0	0	0	0
...........................................................................................................................................................................................................TGGAACACA-GAG--GCTTAATTTACT-ATT..............................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................TTTCATTA-CTAAAA-CCT-TTG---TTACCT---........................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................CA--------------ACCAAA-TTTCAGGCTCAAGAAAGA......................................	26	1	1.00	1	0	0	0	0	1	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................CTGCCGAGGATCGTATCCGGGGAC.......	24	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................TTCATTA-CTAAAA-CCT-TTG---TTACCT---TTA.....................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................TGGAAAGAGCAAACTTAATGAAC.........................................................................................	23	1	1.00	1	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................AAATGGAAAGAGCAAACTTAATGAAC.........................................................................................	26	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................GAGCAAACTTAATGAACTGGC-TGGCCCA--------------...............................................................	28	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................TCAAGAAAGACACGGTTCTGCCGAGGAA....................	28	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................GCAAACTTAATGAACTGGC-TGGCC...............................................................................	24	1	1.00	1	0	1	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................AAGAGCAAACTTAATGAACTGGC-TGG.................................................................................	26	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................................CACA-GAG--GCTTAATTTACT-ATTAGCT..........................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0
..............................................................................................................................................................................................................................................TTCATTA-CTAAAA-CCT-TTG---TTACCT---........................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGAGGATCGTATCCGGG..........	20	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................TGAACTGGC-TGGCCCA--------------ACCAAA-TTTCA...................................................	27	1	1.00	1	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................ATGGAAAGAGCAAACTTAATGAACTGG......................................................................................	27	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................GGCTCAAGAAAGACACGGTTCTGCC..........................	25	1	1.00	1	0	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................AAACTTAATGAACTGGC-TGGC................................................................................	21	1	1.00	1	0	1	0	0	0	0
T-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATTTGGAACACA-GAG--GCTTAATTT.....................................................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................TGGC-TGGCCCA--------------ACCAAA-TTTCAGGCT...............................................	26	1	1.00	1	0	1	0	0	0	0
..................................................................................................................................................................................................................................TACT-ATTAGCTTTCATTA-CTAAAA-CCT-T......................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	1	0
........................................................................................................................................................................................................................................................................................................................................TGGAAAGAGCAAACTTAATGAACTGGT-....................................................................................	27	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................CAAGAAAGACACGGTTCTGCCGAGGATC...................	28	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................CAGGCTCAAGAAAGACACGGTTCTGC...........................	26	1	1.00	1	0	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................AAACTTAATGAACTGGC-TGGCCCA--------------AC.............................................................	26	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................GCCGAGGATCGTATCCGGGGAC.......	22	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................................TTTCATTA-CTAAAA-CCT-TTG---TTACCT---T.......................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0
..............................................................................................................................................................................................................................................TTCATTA-CTAAAA-CCT-TTG---TTACC............................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................GCAAACTTAATGAACTGGC-TGGCCC..............................................................................	25	1	1.00	1	0	1	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................AACTTAATGAACTGGC-TGGCCC..............................................................................	22	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGCCGAGGATCGTATCCGGG..........	24	1	1.00	1	0	1	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................TTAATGAACTGGC-TGGCCCA--------------ACC............................................................	23	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................TAGCTTTCATTA-CTAAAA-CCT-TTG---TTACC............................................................................................................................................................................	29	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................TAAAAATTAAATGGAAAGAGCAAAC..................................................................................................	25	1	1.00	1	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................AAAGAGCAAACTTAATGAACTGGC-TGG.................................................................................	27	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................GCTCAAGAAAGACACGGTTCTGCCGAG.......................	27	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGAGGATCGTATCCGGGGACT......	24	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCCGAGGATCGTATCCGGGGACTTG....	28	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................AAGACACGGTTCTGCCGAGGATCG..................	24	1	1.00	1	0	1	0	0	0	0
.................................................................................................................................................................................................................................................ATTA-CTAAAA-CCT-TTG---TTACCT---TTATT...................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................AGGCTCAAGAAAGACACGGTTCTGC...........................	25	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................AGAGCAAACTTAATGAACTGGC-TGGCCC..............................................................................	28	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................AAGAAAGACACGGTTCTGCCGAGGATC...................	27	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................................................................................TATTTGGAACACA-GAG--GCTTAATG......................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................CAAACTTAATGAACTGGC-TGGCCCA--------------AC.............................................................	27	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATCGTATCCGGGGACTTGAAAC	26	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................TGAACTGGC-TGGCCCA--------------ACCAAA-TTTCAGG.................................................	29	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................TCAAGAAAGACACGGTTCTGCCG.........................	23	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................TCAAGAAAGACACGGTTCTGC...........................	21	1	1.00	1	0	1	0	0	0	0
...................................................................................................................................................................................................................................................................................TTC-A-------T---------------------------ATTAAAAATTAAATGGAAAGAGC......................................................................................................	28	1	1.00	1	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................CA--------------ACCAAA-TTTCAGGCTCAAGAAAGAC.....................................	27	1	1.00	1	0	1	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................AACTGGC-TGGCCCA--------------ACCAAA-TTTCAGG.................................................	27	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................TACT-ATTAGCTTTCATTA-CTAAAA-CCC-.......................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................ACTTAATGAACTGGC-TGGCCCA--------------...............................................................	22	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................GGAAAGAGCAAACTTAATGAACTGG......................................................................................	25	1	1.00	1	0	1	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................AAA-TTTCAGGCTCAAGAAAGACACGGT................................	27	1	1.00	1	0	1	0	0	0	0
..............................................................................................................................................................................................................AACACA-GAG--GCTTAATTTACT-ATTAGC...........................................................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0	0
..................................................................................................................................................................................................................................TACT-ATTAGCTTTCATTA-CTAAAA-CCT-.......................................................................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TTCAGGCTCAAGAAAGACACGGTT...............................	24	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................TTTCATTA-CTAAAA-CCT-TTG---TTACC............................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................GAGCAAACTTAATGAACTGGC-TGGC................................................................................	25	1	1.00	1	0	0	1	0	0	0
.............................................................................................................................................................................................................GAACACA-GAG--GCTTAATTTACT-ATTAGC...........................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0
.........................................................................................................................................................................................................TTTGGAACACA-GAG--GCTTAATTTACT-.................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................AGGCTCAAGAAAGACACGGTTCC.............................	23	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................................................................ATTTGGAACACA-GAG--GCTTAATT......................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................AAGACACGGTTCTGCCGAGGATCGT.................	25	1	1.00	1	0	1	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTGCCGAGGATCGTATCCGGGC.........	25	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCCGAGGATCGTATCCGGGGACTC.....	27	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TTCAGGCTCAAGAAAGACACGGTTCT.............................	26	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................AACTTAATGAACTGGC-TGGCCCA--------------ACCAA..........................................................	28	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................CTCAAGAAAGACACGGTTCTGCCGAGGA.....................	28	1	1.00	1	0	1	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................GAAAGACACGGTTCTGCCGAGGATC...................	25	1	1.00	1	1	0	0	0	0	0
................................................................................................................................................................................................................................TTTACT-ATTAGCTTTCATTA-CTAAAA-CC.........................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................TTAATGAACTGGC-TGGCCCA--------------ACCAA..........................................................	25	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................TAATGAACTGGC-TGGCCCA--------------ACCAAA-TTTC....................................................	29	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................AACTTAATGAACTGGC-TGGCCCA--------------ACCA...........................................................	27	1	1.00	1	1	0	0	0	0	0

droBip1

TTTGG-------------------------------------------------------T---ATATTGAGTTATTATTACCTTT-AATTTGT-------------------CTTGAAATCCTTAAA-----------------------------------------------------------CAACTA---CTGTACTTGGTACTCA-GAG--GCCTCATTCACT-ATTAGCTTTCATTA-CTAAAA-CCT-TTA---TTACCT---TTCTTC--------AT---------------------------GTTAACATTTAAATGAAAAGAACAAACTTAATGAACTGGC-TGGCCCA--------------ACCAATATTTCAGGCTCAAGAAAGGCACGGTTCTGCCGAGGATCGCATCCGGGGACTTGAGAA	Size	Hit Count	Total Norm	Total
No Reads

dp5

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------------AACCGC-TTTCAGGCTCAAGAGAGACATGGATCGGCGGAGGATCGTATACGGGGACTGGAAAC	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................................................................................................................CATGGATCGGCGGAGGATCGTATACGG...........	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................GGCGGAGGATCGTATACGGG..........	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................CAAGAGAGACATGGATCGGC...........................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................GGATCGGCGGAGGATCGTATACGGGGA........	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0

droPer2

GCACA-------------------------------------------------------ATTTTCTAC--------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTCTT-TTTAATTTTCGTTA-CAACAT-T---------------------------------TATGGCTTG---------TGGAATGTGA----TTTACTAAACATT------------------TTCTT-TGGCTCCGAAAACAAAAACCAAACCGC-TTTCAGGCTCAAGAGAGACATGGATCGGCGGAGGATCGTATACGGGGACTGGAAAC	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................GGATCGGCGGAGGATCGTATACG............	23	1	1.00	1	0	0	0	0	0	1
.........................................................................................................................................................................................................................................................................................................................................................................................................CAAGAGAGACATGGATCGGCGGAGGAT....................	27	1	1.00	1	1	0	0	0	0	0

droWil2

----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGCTCAGGAAAGACATGGGTCAGCTGAGGATCGCATACGAGGATTGGAGAA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
................................................................................................................................................................................................................................................................................................................................................................................................................GACATGGGTCAGCTGAGGAT....................	20	1	1.00	1	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................................CATGGGTCAGCTGAGGAT....................	18	1	1.00	1	0	0	0	1	0

droVir3

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAA--ACTTTCCTCACT-CTTAGCTTTCATTAACTAACA-TTTACAA---CTAACTATCTTGTCTATCTATTATTATGGCCATTTAACTCGATTGAATATGC--------------------------TTTATTAAACGATTTGGGCTGA--------------ACACAT-TTGCAGGCTCAAGAACGTCATGGCTCGGCGGAGGATCGCATACGGGCATTGGAAAC

Size

Hit Count

Total Norm

Total

M027
Male-body

M028
Head

M047
Female-body

M061
Embryo

SRR060654
Ovary

SRR060655
Testis

SRR060656
Ovary

SRR060657
Testis

SRR060658
Ovary

SRR060659
Testis

SRR060660
Ovary

SRR060661
Embryo

SRR060662
Embryo

SRR060663
Embryo

SRR060664
Male-body

SRR060665
Female-body

SRR060666
Male-body

SRR060667
Female-body

SRR060668
Male-body

SRR060669
Female-body

SRR060670
Testis

SRR060671
Male-body

SRR060672
Female-body

SRR060673
Ovary

SRR060674
Ovary

SRR060675
Ovary

SRR060676
Ovary

SRR060677
Ovary

SRR060678
Testis

SRR060679
Testis

SRR060680
Testis

SRR060681
Testis

SRR060682
Embryo

SRR060683
Testis

SRR060684
Embryo

SRR060685
Embryo

SRR060686
Embryo

SRR060687
Embryo

SRR060688
Ovary

SRR060689
Testis

SRR1106712
embryo_0-2h

SRR1106713
embryo_0-2h

SRR1106714
embryo_2-4h

SRR1106715
embryo_4-6h

SRR1106716
embryo_4-6h

SRR1106717
embryo_6-8h

SRR1106718
embryo_6-8h

SRR1106719
embryo_8-10h

SRR1106720
embryo_8-10h

SRR1106721
embryo_10-12h

SRR1106722
embryo_10-12h

SRR1106723
embryo_12-14h

SRR1106724
embryo_12-14h

SRR1106725
embryo_14-16h

SRR1106726
embryo_14-16h

SRR1106727
larvae

SRR1106728
larvae

SRR1106729
mixed whole adult body

SRR1106730
embryo_16-30h

V047
Embryo

V053
Head

V116
Male-body

GSM1528803
follicle cells

No Reads

droMoj3

A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAAGAAA-ACTCCTCACA-TTTAGCTTTCATTA-CTAATA-CAA-ACA---CTAATT-T-GTTGTC-C------TTATGACGAGAGATACCCCTTGAATTTGC--------------------------ATTATTAAACGTGTTTGGCTGA---------------ACGCT-TTGCAGGCTCAAGAACGTCATGGCTCGGCGGAGGATCGCATACGGGGCTTGGAAGC	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
....................................................................................................................................................................................................................................................................................................................................................................TGGCTGA---------------ACGCT-TTGCAGC.................................................	19	1	1.00	1	0	0	0	0	1	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GCATACGGGGCTTGGAAG.	18	1	1.00	1	0	0	0	1	0	0

droGri2

AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCCTCACTTTTTAGCTTTCATTA-CTAATA-CAA-AAA---CTAATT-TATTGTCT-A------TTGTGATCATTGAATCCTATTGAATAAAC--------------------------GTAATTAAATGAGTTTGGCTGA--------------ACGCA--TTACAGGCTCAAGAACGTCACGGTTCGGCGGAGGATCGCATTCGGGGCCTGGAGAC	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dsi_5816

2l:6501180-6501329 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads