ID:dsi_5802 |
Coordinate:2r:5280965-5281114 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
intergenic
No Repeatable elements found
|
TGCAGAGTCAATAAAACTAACCTACCGTAGAGTGGACCAAGTGGAGCACCAGCGTTGGCCTTGAAAGTGCAAGTGGGGTGACGCAATTGTTTGGGAGCCAAAAGGAGTCGGGGGTGGAGCGGGAAGGCCTGGGTAGTTGCTTAACTGCCAGCTGAACCTTTTGTAATTGGGATCTTGCATTCGCCATCTTGCATCGACAGACTGCTTCGAGCGGATTGCACTGGAGGCGATGCTGCCATTTGAGAAGACC
**************************************************....((....(((...(((((((...(((((.((((..((((.((...((((((((((.((.(((.((((((....((....))..)))))).))).)).)))...)))))))...)).)))).))))..)))))..)))))))))).))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M023 head |
M025 embryo |
SRR618934 dsim w501 ovaries |
SRR553485 Chicharo_3 day-old ovaries |
SRR553487 NRT_0-2 hours eggs |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................................................................................................................CGATGCTGCCATTTGAGAAGAC. | 22 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..............................................................................................................................................................................................................TCGAGCGGATTGCACTGGAGGC...................... | 22 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..................................................................................................CAATAGGAGTCGGGGATGG..................................................................................................................................... | 19 | 2 | 2 | 0.50 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ........................................................................................................................CGGAAGGCCTGGGTA................................................................................................................... | 15 | 1 | 2 | 0.50 | 1 | 0 | 0 | 0 | 1 | 0 | 0 |
| ...................................................................................................................................................................................................................................CGATGCTACCATCTGAG...... | 17 | 2 | 9 | 0.22 | 2 | 0 | 0 | 0 | 0 | 1 | 1 |
| ..............................................................................................GCGCCAAAAGGAGTCG............................................................................................................................................ | 16 | 1 | 9 | 0.11 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .......................................................................................................................CCGGAAGGACTGGGTA................................................................................................................... | 16 | 2 | 19 | 0.11 | 2 | 0 | 0 | 0 | 0 | 2 | 0 |
| .................................................................................................CCAATAGGACTAGGGGGTG...................................................................................................................................... | 19 | 3 | 12 | 0.08 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| .................................................................................CGCCATTGTTTGGGA.......................................................................................................................................................... | 15 | 1 | 16 | 0.06 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| .........................................................................................................................GGAAGGTCTGGGTAAT................................................................................................................. | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| ..................................................................................................................TGAAGCGGGAAGGGCT........................................................................................................................ | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| .........................................................................................................................GGAAGGACTGGGTAAT................................................................................................................. | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 | 0 |
| .................................GGACCAATTGGAGGACCCG...................................................................................................................................................................................................... | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
|
ACGTCTCAGTTATTTTGATTGGATGGCATCTCACCTGGTTCACCTCGTGGTCGCAACCGGAACTTTCACGTTCACCCCACTGCGTTAACAAACCCTCGGTTTTCCTCAGCCCCCACCTCGCCCTTCCGGACCCATCAACGAATTGACGGTCGACTTGGAAAACATTAACCCTAGAACGTAAGCGGTAGAACGTAGCTGTCTGACGAAGCTCGCCTAACGTGACCTCCGCTACGACGGTAAACTCTTCTGG
**************************************************....((....(((...(((((((...(((((.((((..((((.((...((((((((((.((.(((.((((((....((....))..)))))).))).)).)))...)))))))...)).)))).))))..)))))..)))))))))).))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553486 Makindu_3 day-old ovaries |
M053 female body |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|
| .............................................................................................................................CCGGTCCTTTCAACGAATTGA........................................................................................................ | 21 | 3 | 7 | 0.14 | 1 | 0 | 1 | 0 |
| ................................................................................................................................................................................................................CTCGCCTAGCGTGACGTC........................ | 18 | 2 | 7 | 0.14 | 1 | 0 | 0 | 1 |
| .........................................................................................................................................................................................................................................ACGTTAAACTCTTCT.. | 15 | 1 | 20 | 0.10 | 2 | 2 | 0 | 0 |
| .....................................................................................................................................................................................................................................TGCTACGTTAAACTCTTCT.. | 19 | 3 | 20 | 0.05 | 1 | 1 | 0 | 0 |
| .......................................................................................................................................................................................................................................CTACGTTAAACTCTTCT.. | 17 | 2 | 20 | 0.05 | 1 | 1 | 0 | 0 |
Generated: 04/23/2015 at 12:04 PM