ID:

dsi_5766

 Coordinate:

2r:2410906-2411055 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.8 -20.6 -20.6

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

TGTACCTTAGCGGTGTAAATTGACTTAACATACAACAACTCTTTAAAATGGTAAGTTACAATATTATAACTTTGGGTGAACTAAAATTTAATGGAGTTGTGAACTGCTCACTATGAATTTCGTAGAAAAGATTTACTGTTGACATATAAAATAATATAAATATAAGTATTTACTTTTCGCTTGAAAAAGCACAATTTATATAAGTACAAGTCCCACACAAAATAAAGACAACATTATTTTCAAATATTAA
**************************************************(((((((....(((((....(((((.....)))))...)))))((((........)))).((((((...))))))(((((...((((..((..((((......))))...))..))))....))))).((((....))))..))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 M024
male body
.......TAGGGGGGTCAATTGACTTAACA............................................................................................................................................................................................................................ 23 3 1 1.00 1 0 0 1 0 0 0
...........GGTGTAAATTGACTTAAC............................................................................................................................................................................................................................. 18 0 1 1.00 1 0 1 0 0 0 0
.......................................................................................TTAATGGAGTTGTGAACTGCTTACTA......................................................................................................................................... 26 1 1 1.00 1 0 0 0 1 0 0
................................................................................................................ATGAATTTCGTAGAAAAGAT...................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................TGGAGTTGTGAACTGCTCACT.......................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
........................................................................TGGATGAACTAAAAGTTGATGG............................................................................................................................................................ 22 3 2 0.50 1 1 0 0 0 0 0
......................................CTATTTAAAGTGGTACGTTA................................................................................................................................................................................................ 20 3 8 0.13 1 0 0 0 0 1 0
.................................AACAACTCTTTAAAATGGCTG.................................................................................................................................................................................................... 21 3 10 0.10 1 0 0 0 0 0 1

Anti-sense strand reads

ACATGGAATCGCCACATTTAACTGAATTGTATGTTGTTGAGAAATTTTACCATTCAATGTTATAATATTGAAACCCACTTGATTTTAAATTACCTCAACACTTGACGAGTGATACTTAAAGCATCTTTTCTAAATGACAACTGTATATTTTATTATATTTATATTCATAAATGAAAAGCGAACTTTTTCGTGTTAAATATATTCATGTTCAGGGTGTGTTTTATTTCTGTTGTAATAAAAGTTTATAATT
**************************************************(((((((....(((((....(((((.....)))))...)))))((((........)))).((((((...))))))(((((...((((..((..((((......))))...))..))))....))))).((((....))))..))))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 M023
head
............................................................................................................................................................................................CGTGTTAAATATATTCATGTTCAGGGT................................... 27 0 1 9.00 9 6 0 1 1 1 0 0
......................................................................................................................................................................................................ATATTCATGTTCAGGGTGTGTTTTAT.......................... 26 0 1 3.00 3 3 0 0 0 0 0 0
...................................................................................................................................................................................................................GGGTGTGTTTTATTTCTGTTGTAAT.............. 25 0 1 2.00 2 2 0 0 0 0 0 0
...............................................................................................................................................................................................GTTAAATATATTCATGTTCAGGGTGT................................. 26 0 1 2.00 2 0 0 2 0 0 0 0
......................................................................................................................................................................................................ATATTCATGTTCAGGGTGTGTTTT............................ 24 0 1 2.00 2 0 0 2 0 0 0 0
...........................................................................................................................................................................................TCGTGTTAAATATATTCATGTTCAGGGT................................... 28 0 1 2.00 2 0 0 0 1 1 0 0
...........................................................................................................................................................................................................CATGTTCAGGGTGTGTTTTATTTCTGT.................... 27 0 1 1.00 1 0 1 0 0 0 0 0
.........................................................................................................................................................................AATGAAAAGCGAACTTTTTCGTGTT........................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0
..........................................................................................................................................................................................................TCATGTTCAGGGTGTGTTTTATTTCT...................... 26 0 1 1.00 1 0 0 1 0 0 0 0
.................................TTGTTGAGAAATTTTACCAT..................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0
.......................................................................................................................AGCATCTTTTCTAAATGACAACTGTAT........................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................................................................................................TTCAGGGTGTGTTTTATTTCTGTTGT................. 26 0 1 1.00 1 1 0 0 0 0 0 0
..........................................................................................................................................................................................................TGATGATCAGGGTGTGTTTTTTT......................... 23 3 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................................AGCATCTTTTCTAAATGACAACTGT.......................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0
..........................................................................................................................................................................................................TCATGTTCAGGGTGTGTTTTATTT........................ 24 0 1 1.00 1 1 0 0 0 0 0 0
.................TTAACTGAATTGTATGTTGTTG................................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0
................................................................................................................................................................................................................TCAGGGTGTGTTTTATTTCTGT.................... 22 0 1 1.00 1 0 1 0 0 0 0 0
......................................................................................................................................TGACAACTGTATATTTTATTATATTTAT........................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................AAAATATATTCATGTTCAGGGTGT................................. 24 1 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................TAAATATATTCATGTTCAGGGTCT................................. 24 1 1 1.00 1 0 0 0 0 1 0 0
.......................................................................................................................................................................................................................GTGTTTTATTTCTGTTGTAA............... 20 0 1 1.00 1 0 1 0 0 0 0 0
...........................................................................................................................................................................TGAAAAGCGAACTTTTTCGTGTTAAA..................................................... 26 0 1 1.00 1 0 1 0 0 0 0 0
..................................................................................................................................................................................................AAATATATTCATGTTCAGGGTGT................................. 23 0 1 1.00 1 0 0 1 0 0 0 0
.................................................................................................ACACTTGACGAGTGATACTTAAAGCATCT............................................................................................................................ 29 0 1 1.00 1 1 0 0 0 0 0 0
.................TTAACTGAATTGTATGTTGTTGAGAAA.............................................................................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0
................................................................................................................................................................................................TTAAATATATTCATGTTCAGGGT................................... 23 0 1 1.00 1 0 0 1 0 0 0 0
...............................................................................................................................................................................................GTTAAATATATTCATGTTCAGGGT................................... 24 0 1 1.00 1 0 0 0 1 0 0 0
...................................................................TTGAAACCCACTTGATTTT.................................................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0
...................................................................................................ACTTGACGAGTGATACTTAA................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0
.....................................................................................................................AAAGCATCTTTTCTAAATGACAACTGT.......................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0
.................................................................................................ACACTTGACGAGTGATACTTAAAGCAT.............................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0
..........................................................................................................................................................................................................TCATGTTCAGGGTGTGTTTTAT.......................... 22 0 1 1.00 1 0 1 0 0 0 0 0
...........................................................................................................AGTGATACTTAAAGCATCTTTTCTAA..................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0
......................TGAAGTTTATGTTGTTTAGAAA.............................................................................................................................................................................................................. 22 3 8 0.13 1 0 1 0 0 0 0 0
........................................................................................................................................................................................................................................TAATAAAAGTTTATAA.. 16 0 8 0.13 1 0 1 0 0 0 0 0
.....................................................................................................................................................TTATTATATTTATAGTCGTGAA............................................................................... 22 3 9 0.11 1 0 0 0 0 0 1 0
....................................TTGAGCAATTTTACC....................................................................................................................................................................................................... 15 1 18 0.06 1 0 1 0 0 0 0 0
.........CGCCAGATTTAACAGACTT.............................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:2410856-2411105 - dsi_5766 TGTACCTTAGCGGTGTAAATTG--------------AC-TTAACATACA-ACA-ACTC----TTTAAAAT-------G--------GTAAGTTACAAT--------------------------------------------------------------------------------------------------------------------------------ATTAT---AACTTTGGGTGAACTAAAATTTAATGGA-GTT-GTGAACTGCTCACTATGAATTTCGTAGAAAAGA--------------------------TTTACTGTTGACA---TATAAAATAATATAAATATAAGTATTTACTTTTCGCTT------------------------------------------------------------------GAAAAAG---------------------CACA-ATTTATATAAGTACA-AGTCCCA---------------CACAAAATAA--AGA---------CAACATTATTTTCAAATATTAA
droSec2 scaffold_26:40732-40981 - TATACGTTAGCGGTGTAAATTG--------------AC-TTAACATACA-ACA-ACTC----TTTAAAAT-------G--------GTAAGTTACAAT--------------------------------------------------------------------------------------------------------------------------------ATTAT---AACTTTGGGTAAACTAAAATTTAATGGA-GTT-GTGAACTGCTCACTATGAATTTCGTATAAAAGA--------------------------TTTACTGTTGACA---TATAAAATAATATAAATATAAGTATTTACTTTTGGCTT------------------------------------------------------------------GAAAAAG---------------------CACA-ATTTATATAAGTACA-AGTCCCA---------------CACAAAATAA--AGA---------CAAAATTATTTTCAAATATTAA
dm3 chr2R:1395012-1395238 - TAAACCTTAGCGGTGTAATTTG--------------AT-TTAACAAAAA-AAA-ACTC----TTTAAAAT-------G--------GTAAGTTACGAT--------------------------------------------------------------------------------------------------------------------------------ATTAT---AACTTTGATTAAACTAAAAATTAATGGA------------GCACATTCTGAATTTTTTATATAAAA--------------------------TTTACTGTTGACTAAATAT----AAATATAAATATAATTATTTACCCTTGCTAT------------------------------------------------------------------GAAAAAA---------------------CACA-ATTTATATAAATATA-AATTCCA---------------CAAGCGATAA--AGTATAAAGT---------------------ATT
droEre2 scaffold_4929:21018077-21018337 + TTTAAAG-----GT-------------------------------TAAA-ACA-ACTT----TATAAAAT-------G--------GTAAGTTACGAT--------------------------------------------------------------------------------------------------------------------------------A--AT---TACTCTGGTCAAACTGAAAATTAATGGA-GTT-ACTAACTACACAGACCCAATTTCTTATATAAAATTGATAATT-TTCTCTAAATATTACACTATCACTTGTCA---T-----ATAATAAAGATATAAATATTTATTCTTGGCTT------------------------------------------------------------------AAAAAAA-----------------------AC-ATTACTATACATTTAAAATTCAACAAACAAACAAATAAATTCAAATTAAAAGA---------TAAAATTATTTTCATAT--ATA
droYak3 v2_chr2L_random_001:290523-290758 - TTTACATAAACAACCAG------------------------AACCAGAA-ACA-ACTT----TTTAAAAT-------G--------GTAAGTTACGAT--------------------------------------------------------------------------------------------------------------------------------ATTAT---ATTTTCGGTTAAACTGAAAATTAATGGA-ATTTAATTAATGCACAGGCTCAATTTCTTATATAAAATTGGCTGTTCTTCTTAA-------------------------T-----ATAATA-AAATAAAAATACTTTTTCTTGGCCT------------------------------------------------------------------AAACAAA-----------------------CC-ATTACAATAATTATAAAATTCAA---------------CACAAAATAA--AGA---------CAATTTTATTTTCGAAA---AT
droEug1 scf7180000408473:460-552 + ATATAA----------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATATAAATATAAATATAAAT----AT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAA---------------------TATA-AAATATAAAACTATA-AA----A---------------TATAAAATAT--AAA---------ATATAAAATATTAAAATATAAA
droBia1 scf7180000301518:1122563-1122658 + TCTTTT----------------A---A-----------------AAAAA-ATA-AATT----TTTAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAAATGCATTAA-ATT-GTAA-----------------------------------------------------------------------------------AAAATCTAAACATTTGCTTAATAGGT------------------------------------------------------------------GAAAGAT---------------------TACA-ATTTATA--------------------------------------------------------------------------TAA
droTak1 scf7180000415683:65214-65402 + CTTAAAA--------------AGTTTAAAACA-GG-AT-TAAACATATA-ACA-ACAA----TTTGCATT-------A--------GGAGTTTGTTAA--------ATTGGTTTCTATTATTCCTTTCTTTAGACGACTTCCGAGTTTTTCGCATAACTTTTTA-------------------------------------CTATAAATATGTTT----AGAAA------------------------------------------------------------------ATAGAAAAGC--------------------------TCTACTTTTTACA---TTTTAAAAATTATAAATATTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---AGGT---------------------ATT
droEle1 scf7180000490669:46694-46932 + AAATTTG----GGTGTAACTT----------------------------------C----------------GAAAACATTCACCAGAACGATATGAAATTTTCAGTGTGTTTTCT-----------------------------------------------------AAAATTTATGGA-CATTAACAAAATAATATAAATACAAATTTAATT----TT------TTTAATT-------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTTAAATCTGTATATAACCCCTTAAT------------------------------------GAAGAAGTCCACACTTGCTTATAAAAGTCAGATATTTTTA----TTGG-AGCCCCA---------------CACCTAAGGC--AAA---AAACATTATTTGGCATTTGAAAAGGTAA
droRho1 scf7180000776648:10478-10650 + AAATTC----------------ATTTGACAGATTCAATGTTTCTTTAATTACTGGTTAACAAAAAAAAAT-------G-------------------------------------------------------------------------------------------------------------------------------------------------------AT---AAGTTTCGTTAAATTAAAATTTGAGTTC-ATT-ATTTACTTTAAACTAAGTAAG-AGTAGATAAAG--------------------------ATTATTTAAGAAA---AACTAAGTAATATCAGTTTCAATAGTTTCTTTTCGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGA
droFic1 scf7180000451827:2103-2191 + TTACCAGAAGCCGTCATAAGCA--------------ACACTAACATAAATACAAATTT----TACAAAAT-------G--------GTAAGTTAAGTT--------------------------------------------------------------------------------------------------------------------------------TTTTGA--AACTTTGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------------TTAAATTT
droKik1 scf7180000301927:2871-3024 - GTAAACA--------------CATTTAAT-----------------AAA-ATA-AATC----TTTGTAAT-------T---------------------------------------------------------------------------------------------------------------------------ACATAAATATGTAT----ATATAATATAAT---ATATTCGATCGGTTTAAATACTA----------------TGTTCACGTTGGGGTCAGTAAGCTGAA--------------------------TTTACTGGCGACT---TAAAAAATAATATAA---------------------------------------------------------------------------------------------------------------------TATG-ATAT------------------------------------------------------------------------ATAAGTAT
droBip1 scf7180000396615:45523-45559 - TGTATAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATATATATATATGTATTTACCCTTTGCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 XL_group1a:7603519-7603645 + ATTTCT----------------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAATA--------------------------TATTCAATTGAAA---TATGAAAATATATAAATATATTTATTTATATTTATTTTTAAAAATAAATATTTGTATTATTTTC--ACA-------------------------------------------TTATATTTATTTTTAAAAA-TAAATATTT------------------------------------------------------TT---------------------ATT
droPer2 scaffold_5157:1432-1551 + ATATAA----------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATATAAATATAAATATAAACAAAA-------------CG-------------TCGAGAACCGA---------------CGGCGTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---------------------CATA-ATTTGTATAATTTAT-AATC------------AACCTGTTTAAAATAA--GGA---------AATAAATGTGTAATTATATTAT
droWil2 scf2_1100000004521:11081917-11082112 + ACTTAT----------------C---------------------ATAAA-ATA-AAGT----ATTAAACTTCAAAATT--------GTACTT----------------------------------------------------------------------------------------------------------GAAAATCAAACAAAAATGAAA-------------TA-----------------------TCAGAACTTTCAT------------TAGTTCTTTTTGAAAGAATCTA-TAAACTTCTTAA-------------------------TAC----AAAAACATGTGTTTTAGCTTGATATCAGCT-------------------------------------------------------------------CAAA-------------------------------------AACCTTA-AGTCATA---------------TACAAATTAA--AGC---------CAAATTTAATTTCAAAAA-TCA
droVir3 scaffold_12936:583810-583891 - TTTAATG--------------CATTTATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--TGGTATTTATACAATTTGTATAATAGA--------------------------TGTGCTATTATTA---TAATAAAAATTGTAACAATAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT---------------------ATT
droMoj3 scaffold_6540:8537632-8537868 + TATCTGTTATCAATTAACTTTG--------------AG-------------------------------------------------------------------------------------------ATAAACTAACTCCGAGCTGTCCACTGTAAATTGTTCTATTAAAACTGTTGTATTAATAAAAATATAATATAAATATAAACAAAAATGTAA-------------TA-------------------------------------------------------------------------------------------------------------------------------------------------TAAAATATAAATATAAATATTATTTTT--ATTCAGCGGTTTCTAATATTATAGAACATTTTTCGGTAAATA---------------------------------AAATAAGCAGA-AGACACA---------------TGCATA------------AAATATTAAACTAATTTTTAATTATTAA
droGri2 scaffold_14822:649120-649211 - ACATAA----------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAATATATATATATATATAATAAGAAATT------------------------------------------------------------------AGAAAAA---------------------CGTA-ATATGTATATATATA-T-----T---------------CTCAAAATTA--CAG---------CGGCATTTT----------TCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGTACCTTAGCGGTGTAAATTG--------------AC-TTAACATACA-ACA-ACTC----TTTAAAAT-------G--------GTAAGTTACAAT--------------------------------------------------------------------------------------------------------------------------------ATTAT---AACTTTGGGTGAACTAAAATTTAATGGA-GTT-GTGAACTGCTCACTATGAATTTCGTAGAAAAGA--------------------------TTTACTGTTGACA---TATAAAATAATATAAATATAAGTATTTACTTTTCGCTT------------------------------------------------------------------GAAAAAG---------------------CACA-ATTTATATAAGTACA-AGTCCCA---------------CACAAAATAA--AGA---------CAACATTATTTTCAAATATTAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........GGTGTAAATTG--------------AC-TTAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
.........................................................................................................................................................................................................................................................................................ATGAATTTCGTAGAAAAGA--------------------------T............................................................................................................................................................................................................................................2011.00100000000001000000
..................................................................................................................................................................................................................................................................TGGA-GTT-GTGAACTGCTCACT..........................................................................................................................................................................................................................................................................................2111.00100000000001000000
................................................A-ACA-ACTC----TTTAAAAT-------G--------GCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.10101000000000000000
droSec2
TATACGTTAGCGGTGTAAATTG--------------AC-TTAACATACA-ACA-ACTC----TTTAAAAT-------G--------GTAAGTTACAAT--------------------------------------------------------------------------------------------------------------------------------ATTAT---AACTTTGGGTAAACTAAAATTTAATGGA-GTT-GTGAACTGCTCACTATGAATTTCGTATAAAAGA--------------------------TTTACTGTTGACA---TATAAAATAATATAAATATAAGTATTTACTTTTGGCTT------------------------------------------------------------------GAAAAAG---------------------CACA-ATTTATATAAGTACA-AGTCCCA---------------CACAAAATAA--AGA---------CAAAATTATTTTCAAATATTAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......TAGCGGTGTAAATTG--------------AC-TTAACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
....CGTTAGCGGTGTAAATTG--------------AC-T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
..........CGGTGTAAATTG--------------AC-TTAACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
dm3
TAAACCTTAGCGGTGTAATTTG--------------AT-TTAACAAAAA-AAA-ACTC----TTTAAAAT-------G--------GTAAGTTACGAT--------------------------------------------------------------------------------------------------------------------------------ATTAT---AACTTTGATTAAACTAAAAATTAATGGA------------GCACATTCTGAATTTTTTATATAAAA--------------------------TTTACTGTTGACTAAATAT----AAATATAAATATAATTATTTACCCTTGCTAT------------------------------------------------------------------GAAAAAA---------------------CACA-ATTTATATAAATATA-AATTCCA---------------CAAGCGATAA--AGTATAAAGT---------------------ATTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....CCTTAGCGGTGTAATTTG--------------AT-TT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22115.00150000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000200009000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....CCTTAGCGGTGTAATTTG--------------AT-TTAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2519.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CCTTAGCGGTGTAATTTG--------------AT-T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CCTTAGCGGTGTAATTTG--------------A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AGCGGTGTAATTTG--------------AT-TTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TAGCGGTGTAATTTG--------------AT-TTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TAGCGGTGTAATTTG--------------AT-TTAACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TTAGCGGTGTAATTTG--------------AT-............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AGCGGTGTAATTTG--------------AT-TTAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TAGCGGTGTAATTTG--------------AT-TTAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TTAGCGGTGTAATTTG--------------AT-TTAACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TAGCGGTGTAATTTG--------------AT-TTAACAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAACCTTAGCGGTGTAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CCTTAGCGGTGTAATTTG--------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ACCTTAGCGGTGTAATTTG--------------AT-T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TTAGCGGTGTAATTTG--------------AT-TTAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
......TTAGCGGTGTAATTTG--------------AT-T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.........GCGGTGTAATTTG--------------AT-TTAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ACCTTAGCGGTGTAATTTG--------------AT-TTAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ACCTTAGCGGTGTAATTTG--------------A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..AACCTTAGCGGTGTAATTTG--------------A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AACCTTAGCGGTGTAATTTG--------------AT-TTAACAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CCTTAGCGGTGTAATTTG--------------AT-TTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TTAGCGGTGTAATTTG--------------AT-TTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CCTTAGCGGTGTAATTTG--------------AT-TTAACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAACCTTAGCGGTGTAATTTG--------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TTAGCGGTGTAATTTG--------------AT-TTAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GTGTAATTTG--------------AT-TTAACAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AACCTTAGCGGTGTAATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................AAAA-AAA-ACTC----TTTAAAAT-------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TAGCGGTGTAATTTG--------------AT-TTAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AGCGGTGTAATTTG--------------AT-TTAACAAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TAGCGGTGTAATTTG--------------AT-T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.......TAGCGGTGTAATTTG--------------AT-TT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CGGTGTAATTTG--------------AT-TTAACAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AACCTTAGCGGTGTAATTTG--------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TTAGCGGTGTAATTTG--------------AT-TTAACAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AACCTTAGCGGTGTAATTTG--------------AT-T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
TAAACCTTAGCGGTGTAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CCTTAGCGGTGTAATTTG--------------AT-TTAACAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GGTGTAATTTG--------------AT-TTAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GTGTAATTTG--------------AT-TTAACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GCGGTGTAATTTG--------------AT-TTAACAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TAGCGGTGTAATTTG--------------AT-TTAACAAAAA-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GCGGTGTAATTTG--------------AT-TTAACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CTTAGCGGTGTAATTTG--------------AT-TTAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAACCTTAGCGGTGTAATTTG--------------A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CCTTAGCGGTGTAATTTG--------------AT-............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GGTGTAATTTG--------------AT-TTAACAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AACCTTAGCGGTGTAATTTG--------------AT-............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AACCTTAGCGGTGTAATTTG--------------AT-TTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ACCTTAGCGGTGTAATTTG--------------AT-TTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TAGCGGTGTAATTTG--------------AT-TTAACAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
TAAACCTTAGCGGTGTAATTTG--------------AT-TTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GGTGTAATTTG--------------AT-TTAACAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TAATGGA------------GCACATTCTGAATTTTTT...............................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAACCTTAGCGGTGTAATTTG--------------AT-TTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TTTAAAG-----GT-------------------------------TAAA-ACA-ACTT----TATAAAAT-------G--------GTAAGTTACGAT--------------------------------------------------------------------------------------------------------------------------------A--AT---TACTCTGGTCAAACTGAAAATTAATGGA-GTT-ACTAACTACACAGACCCAATTTCTTATATAAAATTGATAATT-TTCTCTAAATATTACACTATCACTTGTCA---T-----ATAATAAAGATATAAATATTTATTCTTGGCTT------------------------------------------------------------------AAAAAAA-----------------------AC-ATTACTATACATTTAAAATTCAACAAACAAACAAATAAATTCAAATTAAAAGA---------TAAAATTATTTTCATAT--ATASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
TTTACATAAACAACCAG------------------------AACCAGAA-ACA-ACTT----TTTAAAAT-------G--------GTAAGTTACGAT--------------------------------------------------------------------------------------------------------------------------------ATTAT---ATTTTCGGTTAAACTGAAAATTAATGGA-ATTTAATTAATGCACAGGCTCAATTTCTTATATAAAATTGGCTGTTCTTCTTAA-------------------------T-----ATAATA-AAATAAAAATACTTTTTCTTGGCCT------------------------------------------------------------------AAACAAA-----------------------CC-ATTACAATAATTATAAAATTCAA---------------CACAAAATAA--AGA---------CAATTTTATTTTCGAAA---ATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.TTACATAAACAACCAG------------------------AACCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...ACATAAACAACCAG------------------------AACCAGAA-ACA-ACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
........AACAACCAG------------------------AACCAGAA-ACA-.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
droEug1
ATATAA----------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATATAAATATAAATATAAAT----AT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAA---------------------TATA-AAATATAAAACTATA-AA----A---------------TATAAAATAT--AAA---------ATATAAAATATTAAAATATAAASizeHit CountTotal NormTotal
No Reads
droBia1
TCTTTT----------------A---A-----------------AAAAA-ATA-AATT----TTTAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAAATGCATTAA-ATT-GTAA-----------------------------------------------------------------------------------AAAATCTAAACATTTGCTTAATAGGT------------------------------------------------------------------GAAAGAT---------------------TACA-ATTTATA--------------------------------------------------------------------------TAASizeHit CountTotal NormTotal
No Reads
droTak1
CTTAAAA--------------AGTTTAAAACA-GG-AT-TAAACATATA-ACA-ACAA----TTTGCATT-------A--------GGAGTTTGTTAA--------ATTGGTTTCTATTATTCCTTTCTTTAGACGACTTCCGAGTTTTTCGCATAACTTTTTA-------------------------------------CTATAAATATGTTT----AGAAA------------------------------------------------------------------ATAGAAAAGC--------------------------TCTACTTTTTACA---TTTTAAAAATTATAAATATTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---AGGT---------------------ATTSizeHit CountTotal NormTotal
No Reads
droEle1
AAATTTG----GGTGTAACTT----------------------------------C----------------GAAAACATTCACCAGAACGATATGAAATTTTCAGTGTGTTTTCT-----------------------------------------------------AAAATTTATGGA-CATTAACAAAATAATATAAATACAAATTTAATT----TT------TTTAATT-------------------------------------------------------------------------------------------------------------------------------------------------TAAATTTTAAATCTGTATATAACCCCTTAAT------------------------------------GAAGAAGTCCACACTTGCTTATAAAAGTCAGATATTTTTA----TTGG-AGCCCCA---------------CACCTAAGGC--AAA---AAACATTATTTGGCATTTGAAAAGGTAASizeHit CountTotal NormTotal
No Reads
droRho1
AAATTC----------------ATTTGACAGATTCAATGTTTCTTTAATTACTGGTTAACAAAAAAAAAT-------G-------------------------------------------------------------------------------------------------------------------------------------------------------AT---AAGTTTCGTTAAATTAAAATTTGAGTTC-ATT-ATTTACTTTAAACTAAGTAAG-AGTAGATAAAG--------------------------ATTATTTAAGAAA---AACTAAGTAATATCAGTTTCAATAGTTTCTTTTCGTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGASizeHit CountTotal NormTotal
No Reads
droFic1
TTACCAGAAGCCGTCATAAGCA--------------ACACTAACATAAATACAAATTT----TACAAAAT-------G--------GTAAGTTAAGTT--------------------------------------------------------------------------------------------------------------------------------TTTTGA--AACTTTGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------------------------------------------------------------------TTAAATTTSizeHit CountTotal NormTotal
No Reads
droKik1
GTAAACA--------------CATTTAAT-----------------AAA-ATA-AATC----TTTGTAAT-------T---------------------------------------------------------------------------------------------------------------------------ACATAAATATGTAT----ATATAATATAAT---ATATTCGATCGGTTTAAATACTA----------------TGTTCACGTTGGGGTCAGTAAGCTGAA--------------------------TTTACTGGCGACT---TAAAAAATAATATAA---------------------------------------------------------------------------------------------------------------------TATG-ATAT------------------------------------------------------------------------ATAAGTATSizeHit CountTotal NormTotal
No Reads
droBip1
TGTATAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATATATATATATGTATTTACCCTTTGCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dp5
ATTTCT----------------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAATA--------------------------TATTCAATTGAAA---TATGAAAATATATAAATATATTTATTTATATTTATTTTTAAAAATAAATATTTGTATTATTTTC--ACA-------------------------------------------TTATATTTATTTTTAAAAA-TAAATATTT------------------------------------------------------TT---------------------ATTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
ATATAA----------------T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATATAAATATAAATATAAACAAAA-------------CG-------------TCGAGAACCGA---------------CGGCGTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---------------------CATA-ATTTGTATAATTTAT-AATC------------AACCTGTTTAAAATAA--GGA---------AATAAATGTGTAATTATATTATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................................................................TAAATATAAACAAAA-------------CG-------------TCGA........................................................................................................................................................................................................................................................................................................................2140.251010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAA--GGA---------AATAAATGTGTAATC.......23200.153000003
................................................................................................................................................................................................................TATAAACAAAA-------------CG-------------TCGAGAAC....................................................................................................................................................................................................................................................................................................................21200.153210000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--GGA---------AATAAATGTGTAATTATAT...24200.102020000
...................................................................................................................................................................................................................AAACAAAA-------------CG-------------TCGAGAACCG..................................................................................................................................................................................................................................................................................................................20200.102200000
................................................................................................................................................................................................................TATAAACAAAA-------------CG-------------TCGAGAACCG..................................................................................................................................................................................................................................................................................................................23200.051010000
...........................................................................................................................................................................................................................................................GAACCGA---------------CGGCGTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---------------------CATA-ATT.................................................................................23200.051010000
..........................................................................................................................................................................................................................A-------------CG-------------TCGAGAACCGA---------------CGGCGTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---------------------CA.......................................................................................25200.051010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAA--GGA---------AATAAATGTGTAATT.......22200.051000001
....................................................................................................................................................................................................................................................................................CGTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---------------------CATA-ATTTGTATAATTTA......................................................................24200.051010000
.......................................................................................................................................................................................................................................................TCGAGAACCGA---------------CGGCGTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---------------------.........................................................................................20200.051010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTAT-AATC------------AACCTGTTTAA.........................................21200.051010000
..............................................................................................................................................................................................................................................................CCGA---------------CGGCGTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---------------------CATA-ATTTGTATAAT.........................................................................28200.051010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-AATC------------AACCTGTTTAAAATAA--..................................21200.051010000
...............................................................................................................................................................................................................................................................CGA---------------CGGCGTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---------------------CATA-ATTTG...............................................................................21200.051010000
...............................................................................................................................................................................................................ATATAAACAAAA-------------CG-------------TCGAGAAC....................................................................................................................................................................................................................................................................................................................22200.051010000
droWil2
ACTTAT----------------C---------------------ATAAA-ATA-AAGT----ATTAAACTTCAAAATT--------GTACTT----------------------------------------------------------------------------------------------------------GAAAATCAAACAAAAATGAAA-------------TA-----------------------TCAGAACTTTCAT------------TAGTTCTTTTTGAAAGAATCTA-TAAACTTCTTAA-------------------------TAC----AAAAACATGTGTTTTAGCTTGATATCAGCT-------------------------------------------------------------------CAAA-------------------------------------AACCTTA-AGTCATA---------------TACAAATTAA--AGC---------CAAATTTAATTTCAAAAA-TCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
TTTAATG--------------CATTTATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--TGGTATTTATACAATTTGTATAATAGA--------------------------TGTGCTATTATTA---TAATAAAAATTGTAACAATAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GT---------------------ATTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--TGGTATTTATACAATTTGTATAA...........................................................................................................................................................................................................................................................................2621.503001000000000000000000000010100000000000000000000000000000000000
...........................TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--TGGTATTTATACAATTTGTATAATA.........................................................................................................................................................................................................................................................................2820.501001000000000000000000000000000000000000000000000000000000000000
droMoj3
TATCTGTTATCAATTAACTTTG--------------AG-------------------------------------------------------------------------------------------ATAAACTAACTCCGAGCTGTCCACTGTAAATTGTTCTATTAAAACTGTTGTATTAATAAAAATATAATATAAATATAAACAAAAATGTAA-------------TA-------------------------------------------------------------------------------------------------------------------------------------------------TAAAATATAAATATAAATATTATTTTT--ATTCAGCGGTTTCTAATATTATAGAACATTTTTCGGTAAATA---------------------------------AAATAAGCAGA-AGACACA---------------TGCATA------------AAATATTAAACTAATTTTTAATTATTAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
ACATAA----------------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------------------------------------------------------------------------------------------TAAAATATATATATATATATAATAAGAAATT------------------------------------------------------------------AGAAAAA---------------------CGTA-ATATGTATATATATA-T-----T---------------CTCAAAATTA--CAG---------CGGCATTTT----------TCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 07:15 PM