ID:

dsi_5756

 Coordinate:

3r:14549486-14549608 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [3r_14549609_14549819_-]; CDS [3r_14549609_14549819_-]; exon [3r_14549014_14549485_-]; CDS [3r_14549014_14549485_-]; intron [3r_14549486_14549608_-]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------##################################################
CCCACGTCCAGTTGCCCCGATCCATCACCGAGGTGGAACTGCTCGATAAGGTAAGTTCGCGACGGAAGGGGATTATGCAATATGGGCAATACAAAGTATTATCAACTGAATAACAAAATATTCTCTACTTGAAGTAAGTTATAAATTATAACTAATCGACTTGGCCATTTCAGATCAACGATCTGAACGAGGACCCCCGGGTGCACGGCATCATAGTGCAAAT
**************************************************((((((((...........))))).)))...((((.(((.......((((.((((..(((((......))))).....))))))))(((((((...))))))).......))).)))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR902008
ovaries
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR902009
testis
 M024
male body		 GSM343915
embryo
...............................................................................................................................................................................CAACGATCTGAACGAGGACCCCCGGG...................... 26 0 1 4.00 4 2 1 0 1 0 0 0 0 0
...................................................................................................................................................TTAACTAATCGACTTGGCCATT...................................................... 22 1 1 2.00 2 0 0 0 0 0 0 2 0 0
......................CATCACCGAGGTGGAACTGCTTGATA............................................................................................................................................................................... 26 1 1 2.00 2 0 0 0 2 0 0 0 0 0
................................................................................................................................................................................AACGATCTGAACGAGGACCCCC......................... 22 0 1 2.00 2 2 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AGATCAACGATCTGAACGAGGACCCCCGG....................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................ATCAACGAGCTGAACGAGGACCCCCGGGT..................... 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................................AGATCAACGATCTGAACGAGGACCC........................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0
........................TCACCGAGGTGGAACTGCTCGATAAGA............................................................................................................................................................................ 27 1 1 1.00 1 0 0 0 0 0 1 0 0 0
..............................................................................................................................................................................TCAACGATCTGAACGAGGACCCCCGGG...................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0
................................................................................................................................................................................AACGATCTGAACGAGGACCCCCGGG...................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................CGAGGACCCCCGGGTGCAC................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................CTGAACGAGGACCCCCGGGTGCACGG............... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................................ACGATCTGAACGAGGACCCC.......................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................GAACGAGGACCCCCGGG...................... 17 0 1 1.00 1 0 0 0 0 0 1 0 0 0
................................................................................................................................................................................AACGATCTGAACGAGGACCCCCGGGTG.................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0 0
..............................................................................................................................................................................TCAACGATCTGAACGAGGACCCCCGGGTG.................... 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0
................................................................................................................................................................................AACGATCTGAACGAGGACCCCCGGGTGC................... 28 0 1 1.00 1 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................TCTGAACGAGGACCCCCGTGG..................... 21 2 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................................CTGAACGAGGACCCCCGGGTGCACGGC.............. 27 0 1 1.00 1 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................TAAGATCAACGATCTGAACGAGGACCCC.......................... 28 1 1 1.00 1 0 1 0 0 0 0 0 0 0
.............................................................................................................................................................................ATCAACGATCTGAACGAGGACCCCC......................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...............................................................................................................................................................................CAACGATCTGAACGAGGACCCCCG........................ 24 0 1 1.00 1 0 0 0 0 0 0 0 0 1
...........................................................................................................................................................................AGATCAACGATCTGAACGAGGACCCC.......................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
................................GTGGAACTGTTCGATGAG............................................................................................................................................................................. 18 2 10 0.10 1 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

GGGTGCAGGTCAACGGGGCTAGGTAGTGGCTCCACCTTGACGAGCTATTCCATTCAAGCGCTGCCTTCCCCTAATACGTTATACCCGTTATGTTTCATAATAGTTGACTTATTGTTTTATAAGAGATGAACTTCATTCAATATTTAATATTGATTAGCTGAACCGGTAAAGTCTAGTTGCTAGACTTGCTCCTGGGGGCCCACGTGCCGTAGTATCACGTTTA
**************************************************((((((((...........))))).)))...((((.(((.......((((.((((..(((((......))))).....))))))))(((((((...))))))).......))).)))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M023
head
...........................................................................ACGTTATACCTGTTAAGTT................................................................................................................................. 19 2 6 0.33 2 2 0 0 0 0
..............................TCCACTTTGACTGGCTATTC............................................................................................................................................................................. 20 3 5 0.20 1 0 0 1 0 0
..........CCACGGGGCTATGTAGGGG.................................................................................................................................................................................................. 19 3 12 0.17 2 0 2 0 0 0
.................................................................................................................................................................................................GGGGGCCCCCGTGCTGT............. 17 2 6 0.17 1 1 0 0 0 0
...............................................................................................................................................................................................CTGGGGGCCCACCTG................. 15 1 8 0.13 1 0 1 0 0 0
................................................TCCATTCAAGCGTTG................................................................................................................................................................ 15 1 9 0.11 1 0 0 1 0 0
................GGCTAGATAGTTGCGCCAC............................................................................................................................................................................................ 19 3 10 0.10 1 1 0 0 0 0
.....................................................................................................................................................................GTAAAGTGTGGTTGATAGAC...................................... 20 3 13 0.08 1 0 0 0 1 0
..............................TCCACTTTGACTGGCTATT.............................................................................................................................................................................. 19 3 20 0.05 1 0 1 0 0 0
................................................ACCATTGAAGCGCTG................................................................................................................................................................ 15 2 20 0.05 1 0 0 0 1 0
......................................................CAGGCGCTGCCTATCCCT....................................................................................................................................................... 18 3 20 0.05 1 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:14549436-14549658 - dsi_5756 CCCACGTCCAGTTGCCCCGATCCATCACCGAGGTGGAACTGCTCGATAAGGTAAGTTCGCGACGGAAGGGGATTATGCAATATGG----------------------------G-C-AATACAAAGT-----------A---------------------------------------------------------------------------------TTATCAACTGAATAACAAAATATTC---TCTACT--------------------------TGAAGTAAGTTATAAATTATA-------------------------------------ACTAA------------------------------------------------------------------------------------------------------------------------------------------------------------TCGA-----CTTGGCCA--TTTCAGATCAACGATCTGAACGAGGACCCCCGGGTGCACGGCATCATAGTGCAAAT
droSec2 scaffold_0:15415791-15416013 - CCCACGTCCAGTTGCCCCGATCCATCACCGAGGTGGAACTGCTCGATAAGGTGAGTTCGCGACGGAAGGGGATTATGCAATATGG----------------------------G-C-AATACAAAGT-----------A---------------------------------------------------------------------------------TTATCAACTGAAAAACAAAATATTC---TCTACT--------------------------TGAAGTCAGTTATAAATTATA-------------------------------------ACTAA------------------------------------------------------------------------------------------------------------------------------------------------------------TCGA-----CTTTGCCA--TTTCAGATCAACGATCTGAACGAGGACCCCCGGGTGCACGGCATCATAGTGCAAAT
dm3 chr3R:6525768-6525990 + CCCACGTCCAGCTGCCCCGATCCATCACCGAGGTGGAATTGCTCGATAAGGTGAGTTTGCGACGGAAGCGGATTATGCAATATGG----------------------------G-C-AATACAATGT-----------T---------------------------------------------------------------------------------ATATCAACTGAAAAACGAAATATTC---TCTACT--------------------------TGAATAAAGTTATAAATAATA-------------------------------------ACTAA------------------------------------------------------------------------------------------------------------------------------------------------------------TCGA-----CTTTACCA--TTTCAGATAAACGATCTGAACGAGGACCCCCGGGTGCACGGCATCATAGTGCAAAT
droEre2 scaffold_4770:15080786-15081008 - CCCACGTCCAGTTGCCTCGATCCATCACCGAGGTGGAGCTGCTCGATAAGGTGAGTTCGCGACGGAAGGGTATTATGCAATATGG----------------------------T-C-AATACAAAGT-----------A---------------------------------------------------------------------------------TTATCAACTGAGAAGCGAAATATTC---CCTACT--------------------------CAA-GTAAGTTATAAATTATT-------------------------------------GGTAA-----------------------------------------------------------------C------------------------------------------------------------------------------------------TCGA-----CTTTACCC--TTTCAGATCAACGACCTGAACGAGGATCCACGAGTACACGGCATCATAGTGCAAAT
droYak3 3R:10563436-10563654 + TCCACGTCCAGTTGCCCCGATCCATCACCGAGGTGGAACTGCTCGATAAGGTGAGTTCGCGACTGAAGGGGATTATGCAATATGT----------------------------T-C-AATACAAAGT-----------A---------------------------------------------------------------------------------TTATCAACTGTATAGCGAAATATTC---CCTACT--------------------------T-----AAGTTATAAATTATT-------------------------------------ACTAA-----------------------------------------------------------------C------------------------------------------------------------------------------------------TCGA-----CTTTACCC--CTTCAGATCAACGACCTCAACGAGGATCCACGGGTGCACGGCATCATAGTGCAAAT
droEug1 scf7180000409797:127567-127834 + CCCACGTCCAGCTGCCCCGATCCATCACCGAATTGGAACTACTCGATAAGGTTCGTATGCGATTGA-GGGGGTTATGCAAT--GGCAAATCTTTTTGTTATGTGAAAAGGCTTAAAAAATGTTAATT-----------A---------------------------------------------------------------------------------ATTATCACT---------------------------------------ATAATTATTACCTGA-------------TTATAATGTAAATATGAGATTGTTTAATGTGATAAAATCGATAATAAT------------------------------------------------------------------------CGAA----------------------CTGA-----------------------------------------------A----------------ATTTCA--CTATAGATTAACGACCTGAACGAAGATCCCCGCGTACATGGAATCATAGTGCAAAT
droBia1 scf7180000302402:8650019-8650319 + TCCACGTCCAGCTGCCCCGATCCATCACCGAGGGGGAACTGCTCGATAAGGTGAGTACCCCACTGAAGAGGGTTATGCAAT--GGTGCA------------------------------TAAAATGT-------ATA----------------AAAAATGGTTGAAAAATGACGATAACATTTCAA--------------ATCTGATGAAATA----------------------------------------------------------------------------------------------------------------------------------------------TTTAAATTGTGTAATAAAGAATTGGTGTGAATAAAATTTAGTATTTAA-CCTATTCCACTTTAAA----------------------CAAAAATGTACCACACAA------------TA----AAT---------------AAAGTAT-----A-ATCTGT--TTGCAGATTAACGACCTGAATGAGGATCCAAAGGTACATGGTATCATAGTGCAAAT
droTak1 scf7180000415653:490885-490993 - CCCACGTCCAACTGCCTCGATCCATCACCGAGGGGGAACTGCTCGATAAGGTGAGTTC--CACTGAAGAGGGTTATGCAAT--GG----------------------------C-T-AACACAATGT-----------T---------------------------------------------------------------------------------TGACCAACTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAA---------------------------------
droEle1 scf7180000486474:772670-772754 + CCCACGTCCAGCTGCCACGATCCATCACCGAGGTGGAACTGCTCGATAAGGTGAGTACTCGATTCAAGGAAGTTATGCAATATAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000780140:61442-61751 + CCCACGTCCAGTTACCCCGATCCATCACCGAGGTGGAACTACTCGATAAGGTGAGTACGCGATTCAAGGGAGTTATGCAACATAA---------------------------------------TGTACTTTTTATA----------------AAAAAT---------------ATAATTTTTCGC--------------AT----TGAATTA-----------------------------TTG---CTT-------------------------------------------------------------------------------------------ATCGAAAAAGTGATTTTAATTGTTTTTTATAAAT---ATGTAAATAAA--TTAGTATTTGAATCT-TT------TGAGATTATTAGAATTTTATTGTTATTGG-------CCAGTTAA------------TA----ATTAAAAGTAA----------CCTT-----C-TTACGC--TTGCAGATCAACGATCTGAACGAGGATCCGCGGGTACATGGTATCATAGTGCAAAT
droFic1 scf7180000454104:172287-172437 + CCCACGTCCAGCTGCCCCGATCCATCACCGAATTGGAACTGCTCGATAAGGTGAGTGCGCGATTGCAGAGGATTATGCAAC--GG----------------------------T-CAAATATAATTC-----------A---------------------------------------------------------------------------------ATCTCAACAGAAAAGTATAAGTTTTAATACTACA--------------------------TTAA-TAATTTTTTAATTTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302475:1763618-1763784 + TCCACGTTAGGCTGCCCCGATCCATCACCGAAGTGGAGCTGCTTGATAAGGTAAGT------------GGGATTATGCAAC--T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT------------------------------------------------------------------------CGAG----------------------CGG-------CGGGGCAC------------CA----AATAAAAATTC----------TTGG------TTTTTCC--TTGCAGATCAACGAGCTGAACGATGATCCTCGCGTCCACGGAATCATTGTGCAGAT
droAna3 scaffold_13340:1173553-1173870 + TCCATGTTCAGCTGCCCCGCTCCATTACGGAACTGGAGCTTCTCGATAAGGTGAGTGT------------TATTATGCAAT--GGGTTA------------------------------TAATAGGT-----------ACACTTTCAAGCATACCTTATGGGTTAAAGTTGCGGATTGTTTTCGAACTAAAGGTTGTACCATATTCCGTTTATCTTAAGTTTTCCAACTG------------------------TGATATGTATC--A----GTATT---------------------------------------------------------------------------------------------------------------------------------------ACTTCGAG----------------------CTGATATATATTTCTTAATGTAGCTTTTAATAAGTGTTCT-----AACGC-AAGAAAGTAT-----C-TCTTGT--TCATAGATCAACGACCTAAACGACGATCCACGAGTGCATGGAATCATCGTTCAGAT
droBip1 scf7180000396395:643013-643302 - TCCACGTTCAGCTGCCCCGCTCCATCACCGAGGTGGAGCTCCTCGATAAGGTGAGTGC------------TATTATGCAAT--GGGGAC------------------------------TGATATGC-------ATGTATATTTTCAAGCATTCCTAATGGTCTTTAATGGAAGACAGTTTTCAAAGTAAAGAATATAGAATCTTATGTTTATCTTAAGTTTCCCAACTG------------------------AGGTATTAATCCCAGTACTTATT---------------------------------------------------------------------------------------------------------------------------------------ACCTCAAA----------------------CTGATAAGTATTTCCTAA--------------------------------------------------CTTTGA--TTTCAGATCAGCGACCTCAACGACGATCCGCAAGTGCATGGAATCATCGTTCAGAT
dp5 2:29432472-29432634 - TCCACGTACAGCTGCCCCGCACCATCACCGAAGTGGAGCTGCTCGATAAGGTGGGTTATCGATT---GTGGATTATGCAAC--GG----------------------------G-A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-------CGG--------------------------------AACCCAAAGAAAT-----------TTTCATTTTGTAGATAAACGATCTGAACGACGACCCCCGAGTGCATGGCATCATCGTGCAGAT
droPer2 scaffold_6:4803052-4803214 - dpe_1924 TCCACGTACAGCTGCCCCGCACCATCACCGAAGTGGAGCTGCTCGATAAGGTGGGTTATCGATT---GTGGATTATGCAAC--GG----------------------------G-A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-------CGG--------------------------------AACCCAAAGAAAT-----------TTTCATTTTGTAGATAAACGATCTGAACGACGACCCCCGAGTGCATGGCATCATCGTGCAGAT
droWil2 scf2_1100000004902:4431608-4431775 + TTCACATTCAGTTGCCCAAGACGATAACCGAACGGGAGTTGCTTGATAAGGTGATAAAGTGTTAAAA----------------------------------------------------TGTTATGT-----------A---------------------------------------------------------------------------------AGATCCACGAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-------GTT--------------------------------AACCCAA-----TCTT-----CTTGATTC--GATTAGATTAACGATCTGAACGATGATCCCCAAGTGCATGGAATTATTGTGCAAAT
droVir3 scaffold_13047:7192496-7192585 - TTACC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTCTA-------------------------------------ATCAA------------------------------------------------------------------------------------------------------------------------------------------------------------TCGCACGTCATTCGCTG--CGGCAGCTGGGCGAGCTGAATGCTGATCCCCTGGTGCACGGCATCATCGTGCAGAT
droMoj3 scaffold_6540:3109325-3109380 - TGCACGTCCAGCTGCCCAGATCCATCACCGAGTCGGAGCTGCTCGATAAGGTGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14830:3056784-3056847 - TTCACATCAAGCTGCCACGCTCTATTTCCGAACTGGAGTTGCTCGATAAGGTAAGTTGATGACG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CCCACGTCCAGTTGCCCCGATCCATCACCGAGGTGGAACTGCTCGATAAGGTAAGTTCGCGACGGAAGGGGATTATGCAATATGG----------------------------G-C-AATACAAAGT-----------A---------------------------------------------------------------------------------TTATCAACTGAATAACAAAATATTC---TCTACT--------------------------TGAAGTAAGTTATAAATTATA-------------------------------------ACTAA------------------------------------------------------------------------------------------------------------------------------------------------------------TCGA-----CTTGGCCA--TTTCAGATCAACGATCTGAACGAGGACCCCCGGGTGCACGGCATCATAGTGCAAATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGATCTGAACGAGGACCCCCGGG......................2614.00400200000100010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGATCTGAACGAGGACCCCC.........................2212.00200200000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATCAACGATCTGAACGAGGACCCCCGG.......................2911.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATCAACGATCTGAACGAGGACCC...........................2511.00100000000000010000
........................TCACCGAGGTGGAACTGCTCGATAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACGATCTGAACGAGGACCCCCGGG......................2711.00100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGATCTGAACGAGGACCCCCGGG......................2511.00100000000000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGACCCCCGGGTGCAC.................1911.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAACGAGGACCCCCGGGTGCACGG...............2611.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATCTGAACGAGGACCCC..........................2011.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGAGGACCCCCGGG......................1711.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGATCTGAACGAGGACCCCCGGGTG....................2711.00100000010000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACGATCTGAACGAGGACCCCCGGGTG....................2911.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGATCTGAACGAGGACCCCCGGGTGC...................2811.00100000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAACGAGGACCCCCGGGTGCACGGC..............2711.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAACGATCTGAACGAGGACCCCC.........................2511.00100100000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGATCTGAACGAGGACCCCCG........................2411.00100000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATCAACGATCTGAACGAGGACCCC..........................2611.00100100000000000000
droSec2
CCCACGTCCAGTTGCCCCGATCCATCACCGAGGTGGAACTGCTCGATAAGGTGAGTTCGCGACGGAAGGGGATTATGCAATATGG----------------------------G-C-AATACAAAGT-----------A---------------------------------------------------------------------------------TTATCAACTGAAAAACAAAATATTC---TCTACT--------------------------TGAAGTCAGTTATAAATTATA-------------------------------------ACTAA------------------------------------------------------------------------------------------------------------------------------------------------------------TCGA-----CTTTGCCA--TTTCAGATCAACGATCTGAACGAGGACCCCCGGGTGCACGGCATCATAGTGCAAATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................CGAGGTGGAACTGCTCGATAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020020
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAACGAGGACCCCCGGGTGCAC.................2411.0010010
........................TCACCGAGGTGGAACTGCTCGATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGAACGAGGACCCCCGGGTGCA..................2511.0010100
........................TCACCGAGGTGGAACTGCTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
.......................ATCACCGAGGTGGAACTGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAACGATCTGAACGA.................................1811.0010010
........................TCACCGAGGTGGAACTGCTCGATAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
dm3
CCCACGTCCAGCTGCCCCGATCCATCACCGAGGTGGAATTGCTCGATAAGGTGAGTTTGCGACGGAAGCGGATTATGCAATATGG----------------------------G-C-AATACAATGT-----------T---------------------------------------------------------------------------------ATATCAACTGAAAAACGAAATATTC---TCTACT--------------------------TGAATAAAGTTATAAATAATA-------------------------------------ACTAA------------------------------------------------------------------------------------------------------------------------------------------------------------TCGA-----CTTTACCA--TTTCAGATAAACGATCTGAACGAGGACCCCCGGGTGCACGGCATCATAGTGCAAATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACGATCTGAACGAGGACCCCCGGG......................27126.00260000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010020000000000000000000000000000000000000000000000000000000001001244100000050000000000000100000000000000000000000000000000000000000000000000000000000000000000021000000001000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACGATCTGAACGAGGACC............................2119.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000204100000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TCACCGAGGTGGAATTGCTCGATAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGATCTGAACGAGGACCCCCGGGTG....................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TCACCGAGGTGGAATTGCTCGATAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACGATCTGAACGAGGACCCCCGGGT.....................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GGTGGAATTGCTCGATAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000200000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCCGGGTGCACGGCAT............1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GTGGAATTGCTCGATAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000001000000000000000001000000
......................CATCACCGAGGTGGAATTGCTCGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGGACCCCCGGGTGCACG................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACCCCCGGGTGCACGGC..............1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CTGCCCCGATCCATCACCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GAGGTGGAATTGCTCGATAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000
........................TCACCGAGGTGGAATTGCTCGAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAACGATCTGAACGAGGACCCCC.........................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AGGTGGAATTGCTCGATAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACGATCTGAACGAGGACCCCCGGGTG....................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGACCCCCGGGTGCACGGCATC...........2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACGATCTGAACGAGGACCCCCGG.......................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGATCTGAACGAGGACCCCCGGG......................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGATCTGAACGAGGACCCCCGGGTGC...................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGATCTGAACGAGGACC............................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGAACGAGGACCCCCGGGA.....................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................GAGGTGGAATTGCTCGATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGGACCCCCGGGTGCACGGC..............2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGATCTGAACGAGGACCCCCGGGT.....................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGATCTGAACGAGGACCCCCGGGTGC...................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAACGATCTGAACGAGGACC............................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TCCAGCTGCCCCGATCCATCACCGAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CGTCCAGCTGCCCCGATCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ATCACCGAGGTGGAATTGCTCGATAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.......................ATCACCGAGGTGGAATTGCTCGATAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGAACGAGGACCCCCGGGTGCACGGCATC...........3211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ACCGAGGTGGAATTGCTCGATAAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAACGAGGACCCCCGGGTGCAC.................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGATCTGAACGAGGACCCCCGGGTG....................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ATCACCGAGGTGGAATTGCTCGATAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGAGGACCCCCGGGTGCACGGCA.............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TTTGCGACGGAAGCGGATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..................GATCCATCACCGAGGTGGAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACGATCTGAACGAGGAC.............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGAGGACCCCCGGGTGCAC.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........................TCACCGAGGTGGAATTGCTCGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCCGGGTGCACGGCATCATAGTGC....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................AGGTGGAATTGCTCGATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.............................GAGGTGGAATTGCTCGATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................CCATCACCGAGGTGGAATTGCTCGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CATCACCGAGGTGGAATTGCTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGACCCCCGGGTGCACGGCAT............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCCCCGGGTGCACGGCATCATAGTGCAAA.3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAACGATCTGAACGAGGACCC...........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCCGGGTGCACGGCATCAT.........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGGACCCCCGGGTGCACGGC..............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CCACGTCCAGCTGCCCCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGATCTGAACGAGGAC.............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GCCCCGATCCATCACCGAGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
............TGCCCCGATCCATCACCGAGGTGGAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CCATCACCGAGGTGGAATTGCTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCGGGTGCACGGCATCATAGTG.....2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CATCACCGAGGTGGAATTGCTCGATAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGGACCCCCGGGTGCACGG...............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TCACCGAGGTGGAATTGCTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGACCCCCGGGTGCACGGC..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..CACGTCCAGCTGCCCCGATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........CAGCTGCCCCGATCCATCACCGAGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................ATCACCGAGGTGGAATTGCTCGATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGATCTGAACGAGGACC............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACCCCCGGGTGCACGGCATCAT.........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGACCCCCGGGTGCACGGCA.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAACGATCTGAACGAGGACCCCCGGG......................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ATCCATCACCGAGGTGGAATTGCTCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGATCTGAACGAGGACCCCC.........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CTGCCCCGATCCATCACCGAGGTGGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ATCACCGAGGTGGAATTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAACGATCTGAACGAGGACCC...........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TCCATCACCGAGGTGGAATTGCTCGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCTGAACGAGGACCCCCGGGTGC...................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CCCACGTCCAGTTGCCTCGATCCATCACCGAGGTGGAGCTGCTCGATAAGGTGAGTTCGCGACGGAAGGGTATTATGCAATATGG----------------------------T-C-AATACAAAGT-----------A---------------------------------------------------------------------------------TTATCAACTGAGAAGCGAAATATTC---CCTACT--------------------------CAA-GTAAGTTATAAATTATT-------------------------------------GGTAA-----------------------------------------------------------------C------------------------------------------------------------------------------------------TCGA-----CTTTACCC--TTTCAGATCAACGACCTGAACGAGGATCCACGAGTACACGGCATCATAGTGCAAATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................TCGATCCATCACCGAGGTGGAGCTGCTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020200000
.......................ATCACCGAGGTGGAGCTGCTCGATAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACGACCTGAACGAGGATCCACGA.......................2611.0010100000
.....................CCATCACCGAGGTGGAGCTGCTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
droYak3
TCCACGTCCAGTTGCCCCGATCCATCACCGAGGTGGAACTGCTCGATAAGGTGAGTTCGCGACTGAAGGGGATTATGCAATATGT----------------------------T-C-AATACAAAGT-----------A---------------------------------------------------------------------------------TTATCAACTGTATAGCGAAATATTC---CCTACT--------------------------T-----AAGTTATAAATTATT-------------------------------------ACTAA-----------------------------------------------------------------C------------------------------------------------------------------------------------------TCGA-----CTTTACCC--CTTCAGATCAACGACCTCAACGAGGATCCACGGGTGCACGGCATCATAGTGCAAATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGACCTCAACGAGGATCCACGG.......................2512.00201100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAACGAGGATCCACGGGT.....................1911.00100100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGACCTCAACGAGGATCCA..........................2211.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGATCCACGGGTGCACGGC..............2111.00100100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATCCACGGGTGCACGGC..............1911.00100100000000
....................TCCATCACCGAGGTGGAACTGCTCGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000
................CCGATCCATCACCGAGGTGGAACTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
........................TCACCGAGGTGGAACTGCTCGATAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGGGTGCACGGCATCATAGT......2211.00101000000000
.........................CACCGAGGTGGAACTGCTCGATAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
droEug1
CCCACGTCCAGCTGCCCCGATCCATCACCGAATTGGAACTACTCGATAAGGTTCGTATGCGATTGA-GGGGGTTATGCAAT--GGCAAATCTTTTTGTTATGTGAAAAGGCTTAAAAAATGTTAATT-----------A---------------------------------------------------------------------------------ATTATCACT---------------------------------------ATAATTATTACCTGA-------------TTATAATGTAAATATGAGATTGTTTAATGTGATAAAATCGATAATAAT------------------------------------------------------------------------CGAA----------------------CTGA-----------------------------------------------A----------------ATTTCA--CTATAGATTAACGACCTGAACGAAGATCCCCGCGTACATGGAATCATAGTGCAAATSizeHit CountTotal NormTotal
No Reads
droBia1
TCCACGTCCAGCTGCCCCGATCCATCACCGAGGGGGAACTGCTCGATAAGGTGAGTACCCCACTGAAGAGGGTTATGCAAT--GGTGCA------------------------------TAAAATGT-------ATA----------------AAAAATGGTTGAAAAATGACGATAACATTTCAA--------------ATCTGATGAAATA----------------------------------------------------------------------------------------------------------------------------------------------TTTAAATTGTGTAATAAAGAATTGGTGTGAATAAAATTTAGTATTTAA-CCTATTCCACTTTAAA----------------------CAAAAATGTACCACACAA------------TA----AAT---------------AAAGTAT-----A-ATCTGT--TTGCAGATTAACGACCTGAATGAGGATCCAAAGGTACATGGTATCATAGTGCAAATSizeHit CountTotal NormTotal
No Reads
droTak1
CCCACGTCCAACTGCCTCGATCCATCACCGAGGGGGAACTGCTCGATAAGGTGAGTTC--CACTGAAGAGGGTTATGCAAT--GG----------------------------C-T-AACACAATGT-----------T---------------------------------------------------------------------------------TGACCAACTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAA---------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CCCACGTCCAGCTGCCACGATCCATCACCGAGGTGGAACTGCTCGATAAGGTGAGTACTCGATTCAAGGAAGTTATGCAATATAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CCCACGTCCAGTTACCCCGATCCATCACCGAGGTGGAACTACTCGATAAGGTGAGTACGCGATTCAAGGGAGTTATGCAACATAA---------------------------------------TGTACTTTTTATA----------------AAAAAT---------------ATAATTTTTCGC--------------AT----TGAATTA-----------------------------TTG---CTT-------------------------------------------------------------------------------------------ATCGAAAAAGTGATTTTAATTGTTTTTTATAAAT---ATGTAAATAAA--TTAGTATTTGAATCT-TT------TGAGATTATTAGAATTTTATTGTTATTGG-------CCAGTTAA------------TA----ATTAAAAGTAA----------CCTT-----C-TTACGC--TTGCAGATCAACGATCTGAACGAGGATCCGCGGGTACATGGTATCATAGTGCAAATSizeHit CountTotal NormTotal
No Reads
droFic1
CCCACGTCCAGCTGCCCCGATCCATCACCGAATTGGAACTGCTCGATAAGGTGAGTGCGCGATTGCAGAGGATTATGCAAC--GG----------------------------T-CAAATATAATTC-----------A---------------------------------------------------------------------------------ATCTCAACAGAAAAGTATAAGTTTTAATACTACA--------------------------TTAA-TAATTTTTTAATTTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TCCACGTTAGGCTGCCCCGATCCATCACCGAAGTGGAGCTGCTTGATAAGGTAAGT------------GGGATTATGCAAC--T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT------------------------------------------------------------------------CGAG----------------------CGG-------CGGGGCAC------------CA----AATAAAAATTC----------TTGG------TTTTTCC--TTGCAGATCAACGAGCTGAACGATGATCCTCGCGTCCACGGAATCATTGTGCAGATSizeHit CountTotal NormTotal
No Reads
droAna3
TCCATGTTCAGCTGCCCCGCTCCATTACGGAACTGGAGCTTCTCGATAAGGTGAGTGT------------TATTATGCAAT--GGGTTA------------------------------TAATAGGT-----------ACACTTTCAAGCATACCTTATGGGTTAAAGTTGCGGATTGTTTTCGAACTAAAGGTTGTACCATATTCCGTTTATCTTAAGTTTTCCAACTG------------------------TGATATGTATC--A----GTATT---------------------------------------------------------------------------------------------------------------------------------------ACTTCGAG----------------------CTGATATATATTTCTTAATGTAGCTTTTAATAAGTGTTCT-----AACGC-AAGAAAGTAT-----C-TCTTGT--TCATAGATCAACGACCTAAACGACGATCCACGAGTGCATGGAATCATCGTTCAGATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................TTACGGAACTGGAGCTTCTCGATAAGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACGAGTGCATGGAATCATCGTTCA...2711.001000010
.......................ATTACGGAACTGGAGCTTCTCGATAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTAAACGACGATCCACGAGTGCAT.................2611.001000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCTAAACGACGATCCACGAGTGC...................2511.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGATCCACGAGTGCATGGAA.............2211.001001000
.......................ATTACGGAACTGGAGCTTCTCGATAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGCATGGAATCATCGTT.....2011.001001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGATCCACGAGTGCATGGAATCA..........2511.001000001
droBip1
TCCACGTTCAGCTGCCCCGCTCCATCACCGAGGTGGAGCTCCTCGATAAGGTGAGTGC------------TATTATGCAAT--GGGGAC------------------------------TGATATGC-------ATGTATATTTTCAAGCATTCCTAATGGTCTTTAATGGAAGACAGTTTTCAAAGTAAAGAATATAGAATCTTATGTTTATCTTAAGTTTCCCAACTG------------------------AGGTATTAATCCCAGTACTTATT---------------------------------------------------------------------------------------------------------------------------------------ACCTCAAA----------------------CTGATAAGTATTTCCTAA--------------------------------------------------CTTTGA--TTTCAGATCAGCGACCTCAACGACGATCCGCAAGTGCATGGAATCATCGTTCAGATSizeHit CountTotal NormTotal
No Reads
dp5
TCCACGTACAGCTGCCCCGCACCATCACCGAAGTGGAGCTGCTCGATAAGGTGGGTTATCGATT---GTGGATTATGCAAC--GG----------------------------G-A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-------CGG--------------------------------AACCCAAAGAAAT-----------TTTCATTTTGTAGATAAACGATCTGAACGACGACCCCCGAGTGCATGGCATCATCGTGCAGATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........................TCACCGAAGTGGAGCTGCTCGATAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020200000000
.......................ATCACCGAAGTGGAGCTGCTCGATAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000001
........................TCACCGAAGTGGAGCTGCTCGATAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAACGACGACCCCCGA.......................1811.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAGTGCATGGCATCATCGT......2111.0010000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACCCCCGAGTGCATGGCATCAT.........2411.0010100000000
droPer2
TCCACGTACAGCTGCCCCGCACCATCACCGAAGTGGAGCTGCTCGATAAGGTGGGTTATCGATT---GTGGATTATGCAAC--GG----------------------------G-A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-------CGG--------------------------------AACCCAAAGAAAT-----------TTTCATTTTGTAGATAAACGATCTGAACGACGACCCCCGAGTGCATGGCATCATCGTGCAGATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAACGACGACCCCCGAGT.....................2016.006600000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGATCTGAACGACGACCCCCGAG......................2513.003300000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGAACGACGACCCCCGAGT.....................2312.002200000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAACGACGACCCCCGAGTGCATGGC..............2711.001100000
..................................................GTGGGTTATCGATT---GTGGAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
......................CATCACCGAAGTGGAGCTGCTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAACGATCTGAACGAC................................1811.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAACGACGACCCCCGAGTG....................2111.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACGATCTGAACGACGACCCCCGAG......................2611.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAACGATCTGAACGACGACCCCCGAGT.....................2911.001100000
...........................................................CGATT---GTGGATTATGCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
droWil2
TTCACATTCAGTTGCCCAAGACGATAACCGAACGGGAGTTGCTTGATAAGGTGATAAAGTGTTAAAA----------------------------------------------------TGTTATGT-----------A---------------------------------------------------------------------------------AGATCCACGAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-------GTT--------------------------------AACCCAA-----TCTT-----CTTGATTC--GATTAGATTAACGATCTGAACGATGATCCCCAAGTGCATGGAATTATTGTGCAAATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....ATTCAGTTGCCCAAGACGATAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200020
......................GATAACCGAACGGGAGTTGCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00220000
............................CGAACGGGAGTTGCTTGATAAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCCAAGTGCATGGAATTATTGTGCAA..2911.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCCCCAAGTGCATGGA..............1811.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTAACGATCTGAACGAT................................1911.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGATGATCCCCAAGT.....................1811.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTGCATGGAATTATTGT......2011.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAACGATGATCCCCAAGTGCA..................2311.00110000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAACGATGATCCCCAAGTGCAT.................2411.00101000
............TGCCCAAGACGATAACCGAACGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTGAACGATGATCCCC.........................1911.00110000
..CACATTCAGTTGCCCAAGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACGATGATCCCCAAGTGC...................2111.00100001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAACGATCTGAACGATGAT.............................2111.00110000
........................TAACCGAACGGGAGTTGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
............TGCCCAAGACGATAACCGAACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
..........................ACCGAACGGGAGTTGCTTGATAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
droVir3
TTACC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTCTA-------------------------------------ATCAA------------------------------------------------------------------------------------------------------------------------------------------------------------TCGCACGTCATTCGCTG--CGGCAGCTGGGCGAGCTGAATGCTGATCCCCTGGTGCACGGCATCATCGTGCAGATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATCCCCTGGTGCACGGC..............2114.004000100000000000001000000010001000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGCTGAATGCTGATCCCCT........................2212.002000000000000000000000010000000010000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATCCCCTGGTGCACGGCATC...........2411.001000000000000000010000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGTGCACGGCATCATCGTGCA...2311.001000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGCTGAATGCTGATCCCCTGG......................2411.001000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAGCTGAATGCTGATCCCCT........................2311.001000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTGAATGCTGATCCCCTGGTGCAC.................2711.001000000000000000000000010000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAGCTGAATGCTGATCCCC.........................2211.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGCTGAATGCTGATCCCCTG.......................2311.001000000000000000100000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATCCCCTGGTGCACGGCAT............2311.001000000000000000000000100000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGCTGATCCCCTGGTGCACGGCA.............2611.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
TGCACGTCCAGCTGCCCAGATCCATCACCGAGTCGGAGCTGCTCGATAAGGTGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................ATCCATCACCGAGTCGGAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
..................GATCCATCACCGAGTCGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
droGri2
TTCACATCAAGCTGCCACGCTCTATTTCCGAACTGGAGTTGCTCGATAAGGTAAGTTGATGACG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........GCTGCCACGCTCTATTTCCG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00220
..................GCTCTATTTCCGAACTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
....CATCAAGCTGCCACGCTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
..............................AACTGGAGTTGCTCGATAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101
........AAGCTGCCACGCTCTATTTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
.......CAAGCTGCCACGCTCTATTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
........AAGCTGCCACGCTCTATTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110

Generated: 05/18/2015 at 05:38 PM