ID:

dsi_5708

 Coordinate:

2r:2409573-2409723 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-21.2 -21.1 -21.1 -21.0

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
(TA)nSimple_repeatSimple_repeat+

Sense Strand Reads

ATATGTAATATCTTTGTACAATATATATTGTATAATACAATATATATATATATATTAACTTGGTTAACAAAAAATACGCAACGTACACTTTTTGAGCATGAATGACATTCATCTGTGTGTTATGACATTATTCTTATAGACACCAGGCTGACATATGTTCATTATCTTAAAGATTTTATTATATATCCATACTTCTTGCAGGCTGATGGAGAATACGACAAGGAACAATTGAGAAGTAGTATCAAATTAAA
**************************************************....((.....................((((.(((...((((((((.(((.((((((((((((((.(((((((((........)))).))))))))).)))...)))).))))))))))))))................)))...))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 O001
Testis
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
............................................................................................................................................................................................................GATGGAGAATACGACAAGGAACA........................ 23 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................TGGCTGATGGAGAATACGACAAGGAA.......................... 26 1 1 1.00 1 1 0 0 0 0
..........................................................................................TTTGAGCATGAATGACATTCATCTGTGT..................................................................................................................................... 28 0 1 1.00 1 0 0 0 1 0
.........................................................................................................................................................................................................GCTGATGGAGAATACGACAAGGAAC......................... 25 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................CTGATGGAGAATACGACAAGGAACAA....................... 26 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................AATACGACAAGGAACAATTGAGAATC.............. 26 2 1 1.00 1 0 1 0 0 0
....................................................................................................................................................................................................................ATACGACAAGGAACAATTGAGAATCC............. 26 3 1 1.00 1 1 0 0 0 0
...........................................................................................................................................................................................................TGATGGAGAATACGACAAGGAAC......................... 23 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................................GGAGAATACGACAAGGAACAA....................... 21 0 1 1.00 1 0 0 1 0 0
.....................TATATAGTGTAGAATACAA................................................................................................................................................................................................................... 19 2 5 0.20 1 0 0 0 0 1

Anti-sense strand reads

TATACATTATAGAAACATGTTATATATAACATATTATGTTATATATATATATATAATTGAACCAATTGTTTTTTATGCGTTGCATGTGAAAAACTCGTACTTACTGTAAGTAGACACACAATACTGTAATAAGAATATCTGTGGTCCGACTGTATACAAGTAATAGAATTTCTAAAATAATATATAGGTATGAAGAACGTCCGACTACCTCTTATGCTGTTCCTTGTTAACTCTTCATCATAGTTTAATTT
**************************************************....((.....................((((.(((...((((((((.(((.((((((((((((((.(((((((((........)))).))))))))).)))...)))).))))))))))))))................)))...))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
............................................................................GCGTTGCATGTGAAAAACTCGTACT...................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0
............................................................................GCGTTGCATGTGAAAAACCCGTACT...................................................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................TAGGTGTGAAGAACGT................................................... 16 1 12 0.17 2 0 0 2 0 0
................................................................................................................................................................................ATGAGATAGAGGTATGAAG........................................................ 19 3 20 0.15 3 0 0 0 3 0
........................................................................................................................................................................................TAGGTGTGAAGAACG.................................................... 15 1 17 0.12 2 0 0 2 0 0
........................................................................................AAAAACTTGTACTTACT.................................................................................................................................................. 17 1 11 0.09 1 1 0 0 0 0
........................................................................................................................................................................................GAGGTATGAAGAACG.................................................... 15 1 18 0.06 1 0 0 1 0 0
..............................................................................................TCGTACTTACTGGATG............................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 1
................................................................................................................................................................................ATCAAATAGAGGTATGAAG........................................................ 19 3 20 0.05 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:2409523-2409773 - dsi_5708 ATATGTAAT---------ATCT-TTGTACAA--------------------------TATATATTGTATAATACAAT-----------------------------------------------------ATATATATATATATTAACTTG-------------------------------------------GTTAACAAAAAATACGCA-------ACGTACACTTTTTGAGCATGAATGACATTCATCTGTGTG-------------------------------------------------TTATGACATTATTCTTATAGACACCAGGC--------------------------------------------------------------------------TGACATATGTTCATTATCTTAAAGATTTTATTATA-TATCCATACTTCTTGCAGGCTGATGGAGA--------------------------ATACGACAAGGAACAATTGAGAAGTAG------------T-ATCAAAT----TAAA
droSec2 scaffold_26:39109-39348 - AATCCAACTTG--------------------------------------------------------------------------------------------------------------------------GCTATATTGGTTAACTTG-------------------------------------------GTTAACAAAAAATACACA-------ACG------------------------TGTATTTG--TGCAA-TATATTTTTGGAAATACAATACACCCGTCCATCATTCGAGTATAATTATGACATTATTCTTATAGACACCAGGC--------------------------------------------------------------------------TGACATATGTTCATGTTCTTAAAGATTTTATTATA-TATCCATACTTCTTGCAGGCTGATGGAGA--------------------------ATACGACAAGGAACAATTGAGAAGTAG------------T-ATCAAAT----TAAA
dm3 chr2R:1394250-1394507 - TTGACTTCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-ACAAAAAATGCACATAAGAAAACGTACCCTTTTTGTGCATGAAAGACATGCATCTGTATGCAA-TATATTTTTGGAAATACAACATACCCGTCCACCAAACGAGTATAATTATGACATTACTCTTGTAGACACCAGGCTGACATGAACATAT-------------------------------------------------------------------AGTTCATTATCTTAAAGATTTTATTATA-TATCCATACTTCTTTCAGGCCGATGGAGA--------------------------ATACGACAAGGAACAATTGAGAAGTAG------------T-ATAAAAT----TAAA
droEre2 scaffold_4929:21019246-21019383 + ATAGATACC---------ATTC-TGACACCATATGTTTCCTTAAC-ATATTAAATCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTATCTTACAAATTTTAACTTA-TAACCTCACTTCTTGCAGGCTGATGGAGA--------------------------ATACGACAAGGAACAACTGAGAAGTAA------------T-TTCAAAT----TAAA
droYak3 v2_chr2L_random_001:288187-288338 - ACATTTTTCTT-----------------------------------------------------------------------------------------------------------------TGAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGACACTAGGCTGACATACATATATACATATTTCCT--------------------------------------------------------AGTTCATTATCTTACAATTTTTATTAAATTAACCATTGTTCTTGCAGGCGGATGGAGA--------------------------ATATGACAAGGAACAATTGAGAAGTAG------------T-TTTAAAT----AAAG
droEug1 scf7180000408984:39601-39786 + TTAAATAAA---------GTCT-TAATAT-G--------------------------TATATATAATATAA-------TAAATATATCAAT---------------------------------------ATATAT-------------------------------------------------------------------------------------ATATATATTAAAAGCTAATAAAATAAGCTTTACTATACCATTTTAAATTTTAAAGTTAGTTTTAATCAATTTCCTAGAGTGT--GAAGTTGATATTCCTATTATAATCACT--GC--------------------------------------------------------------------------TTTTATAAGTTCATT-------------------------------------------------------------------------------------------------------------------------ATT----TTAA
droBia1 scf7180000302377:1897452-1897538 + TAACTTTTT---------A---------AAG--------------------------GATGCATCGCAGACTAATAT-----------------------------------------------------ATATATTAATATACTAATATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAATATATAATA-TGTAAATT-CTTTT---------------------------------------------------------------------------------------TT----AGTA
droTak1 scf7180000414654:14861-15002 - ATTTTTTTGTGTGTTC-T------------A------------------------------------------------------------------------------------------------------AATTAATTATTTAGCATTTGTTATTTATCAGATATTCCTTTTTTAAAAATGGGTTTTTATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT--------TTCACACTTCTTGTAGGCGGATGGAGA--------------------------ATATGACAAGGAACAATTAAGAAGTAT------------G-------T----GAAA
droEle1 scf7180000490697:13376-13463 + TGTAAAAAAT--------TTAC-TGTTTTAAAATGTAATATATAT-ATATATATATATAT-------ATA--------------------TAAAATAT-A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATA--------------------------ATA-TACAAAAAACATT-----------------------------TT----TTAA
droRho1 scf7180000777015:7748-7874 - ATATTTTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATAAAATCTGACT--------------------------------------------------------------------------TAACATATCTTAAGTCTGTCAACTCTTTGCTAAGA-CAATGAGATTTGTTGGAGATCAAAGGATA--------------------------GTACCACAGAACACAGTAACTAAAAAA------------T-TGTTATT----GAAA
droFic1 scf7180000454058:18247-18333 - ATTTCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTTTATAACA-CATGTGTT-ATTTTTCAGGGTGATGGGGA--------------------------ATATGACAAGGAACAATTGAGAAGTTT------------GTATA-CAC----TCAG
droKik1 scf7180000298291:8774-8852 + ATATTAACA---------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----------TAATTTAT-ATATTACAGGCTGATGGTGA--------------------------ATACGACAAGGAACAACTGAGAAGTGA------------GTATCTGTT----TTGT
droAna3 scaffold_13339:2216936-2217049 + ATATGCTTATAAAAACT-TTA-----------------------------------------------------------------------------------------------------------------------------ATATTTTA--------------------------ATAGTGTTATATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----TATTGCT--------TTTA-TTTATTTTCAGTCTGACGCAGA--------------------------ATACGACAAAGAGCAACTTAGAAGTAT------------A--TTAATT----GGCA
droBip1 scf7180000394512:12249-12376 - TTATACTTACATATAC-C------------A-----------------------------------------------------------------------------------------------------------AAGTATTAATAATTTT--------------------------ATTGGGTTGTTCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTT-------AAA-TTTATTTTCAGTCTGACGCAGA--------------------------ATATGACAAAGAACAACTTAGAAGTATACTAATTGGTAAT-ATTA-AA----GAAA
dp5 Unknown_group_214:21527-21710 - ATATATAAT---------ATAA-TATAACAATATATTACATACTC-TCTTATATATATAT-------ATATATTATATTCAAACTAACTATATATA-TATAT-ATATATTATATATTATTTTATATTATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATATATTATTATAATTA-----TT------------------------------------ATTATTATTATATACATATATA---TATTATATATTTA------------------------CTATATA-GTTTT---------------------------------------------------------------------------------------TC----TTAT
droPer2 scaffold_8635:132-315 + CACTATATATATATAT----------------------------------AT------------------------------------------------------------------------------ATATAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATATATTAGATAAATTATTAACAGTTATCTTATTTACATTTTATG-----------TAGCAATTTTTGGATTGCGTAATTTTTTATTTAAA-TTGTTAA------------CTAT---ATAATAATATATTAAACATTTATATATATATATATTATCTATTAATTTAGAACTAG------------T-ATAT-AA----AAAA
droWil2 scf2_1100000004513:5210921-5211095 + TTTTGAGCATATGTAC-------CTACATACAATTGGCCATACATTATAAATACACTCGT-------ACA--------------------GAAGACGC-ACACGTGAA----------------------------------TTTAGCCATTTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAATTAGATTTCCTTAAATTATTTTCT-GCTTCACAGGCCGA---AGA--------------------------GTACGATAAAGAGCAACTGAGAAGTGC------------GTAAGAAATTTGTGGGG
droVir3 scaffold_12823:216477-216607 + TATACTGTATATA--------------------------------------------------TTATATAATATAATATATATATAATTCTTATTT-ATAAT--------------------------------------------------------------------------------------------GTATATATTATATATGTA-------ATGTATATATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATATAAGAATT--------------------------ATAT-ATAATGTATATATTATACATAA------------G-AATTATA----TACA
droMoj3 scaffold_6500:16008948-16009148 - ATAATTAAT---------ATTACTTCTATTA--------------------------TATATATAATATAAAATAAAATAAATATATTTATTAATA-TAAAT-AAATGTAGAATATTTTTTTTTCGAATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAATATTTATATCACTT-------------------------------------------ATTTATATTTTTTAATTAAACATTTTAACTTTTTTTCATTTTTTTT--TTTTTAATTAAA-AATTTAAACTATATGTAGCTCGAAAGGAA--------------------------A------------------------------------------------------T
droGri2 scaffold_14853:4884276-4884369 + ACATATATT---------ATAT-ATATTTTATATATAATATATAT-ATATATATATA---------------------------TATGTATATATA-TATAT-AT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGAAAAGCGT------------GCGTCGTATTTGAGTAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATATGTAAT---------ATCT-TTGTACAA--------------------------TATATATTGTATAATACAAT-----------------------------------------------------ATATATATATATATTAACTTG-------------------------------------------GTTAACAAAAAATACGCA-------ACGTACACTTTTTGAGCATGAATGACATTCATCTGTGTG-------------------------------------------------TTATGACATTATTCTTATAGACACCAGGC--------------------------------------------------------------------------TGACATATGTTCATTATCTTAAAGATTTTATTATA-TATCCATACTTCTTGCAGGCTGATGGAGA--------------------------ATACGACAAGGAACAATTGAGAAGTAG------------T-ATCAAAT----TAAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGA--------------------------ATACGACAAGGAACA.........................................2311.00101000000000000000
.....................................................................................................................................................................................................................................TTTGAGCATGAATGACATTCATCTGTGT............................................................................................................................................................................................................................................................................................................2811.00100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATGGAGA--------------------------ATACGACAAGGAAC..........................................2511.00101000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGATGGAGA--------------------------ATACGACAAGGAACAA........................................2611.00101000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------ATACGACAAGGAACAATTGAGAATC...............................2611.00110000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGACAAGGAACAATTGAGAATCC..............................2611.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGGAGA--------------------------ATACGACAAGGAAC..........................................2311.00101000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGA--------------------------ATACGACAAGGAACAA........................................2111.00100001000000000000
droSec2
AATCCAACTTG--------------------------------------------------------------------------------------------------------------------------GCTATATTGGTTAACTTG-------------------------------------------GTTAACAAAAAATACACA-------ACG------------------------TGTATTTG--TGCAA-TATATTTTTGGAAATACAATACACCCGTCCATCATTCGAGTATAATTATGACATTATTCTTATAGACACCAGGC--------------------------------------------------------------------------TGACATATGTTCATGTTCTTAAAGATTTTATTATA-TATCCATACTTCTTGCAGGCTGATGGAGA--------------------------ATACGACAAGGAACAATTGAGAAGTAG------------T-ATCAAAT----TAAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGACAAGGAACAATTGA....................................2011.0010100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGA--------------------------ATACGACAAGGAACA.........................................2011.0011000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGACAAGGAACAATTGAG...................................2111.0010100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGATGGAGA--------------------------ATACGACAAGGAAC..........................................2611.0011000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGACAAGGAACAATTGAGA..................................2111.0010100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGGAGA--------------------------ATACGACAAGGAAC..........................................2311.0010001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------ATACGACAAGGAACAATTGAG...................................2211.0010100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGACAAGGAACAATTG.....................................1811.0011000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGA--------------------------ATACGACAAGGAACAATTGAGA..................................2811.0010100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGA--------------------------ATACGACAAGGAACA.........................................2311.0010100
................................................................................................................................................................................................................................................................................................................TAATTATGACATTATTCTTATAGACA...................................................................................................................................................................................................................................2611.0011000
dm3
TTGACTTCG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-ACAAAAAATGCACATAAGAAAACGTACCCTTTTTGTGCATGAAAGACATGCATCTGTATGCAA-TATATTTTTGGAAATACAACATACCCGTCCACCAAACGAGTATAATTATGACATTACTCTTGTAGACACCAGGCTGACATGAACATAT-------------------------------------------------------------------AGTTCATTATCTTAAAGATTTTATTATA-TATCCATACTTCTTTCAGGCCGATGGAGA--------------------------ATACGACAAGGAACAATTGAGAAGTAG------------T-ATAAAAT----TAAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGATGGAGA--------------------------ATACGACA................................................20116.00160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001400010100002010000400000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTGAGAAGTAG------------T-ATAAAAT----TA..2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGATGGAGA--------------------------ATACGACAAG..............................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGA--------------------------ATACGACAAGGAACA.........................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGA--------------------------ATACGACAAGGAAC..........................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGA--------------------------ATACGACAAGGAACA.........................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000010000000000000000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGATGGAGA--------------------------ATACGACAA...............................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGA--------------------------ATACGACAAGGAAC..........................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................CAACATACCCGTCCACCAAAC..................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGA--------------------------ATACGACAAGGA............................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGA--------------------------ATACGACAAGG.............................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAAGGAACAATTGAGA..................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000
.............................................................................................................................................................................................................................................TGAAAGACATGCATCTGTATGCAA-T......................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGACAAGGAACAATTGAG...................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................GACATGAACATAT-------------------------------------------------------------------AGTTCATTAT..................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGATGGAGA--------------------------ATACGACAAGGAA...........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA--------------------------ATACGACAAGGAACAATTGAG...................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGACAAGGAACAATTGAGA..................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGA--------------------------ATACGACAAGGAACAATT......................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGA--------------------------ATACGACAAGGAACATC.......................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGATGGAGA--------------------------ATACGACAAGGAACA.........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGACAAGGAACAATTGA....................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGATGGAGA--------------------------ATACGACAAGG.............................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAACAATTGAGAAGTAG------------T-...............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGATGGAGA--------------------------ATACGACAAGGAACA.........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGATGGAGA--------------------------ATACGAC.................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGATGGAGA--------------------------ATACGACAA...............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGA--------------------------ATACGACAAGGAACAATTGAGA..................................2911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGA--------------------------ATACGACAAGGAACAATT......................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGATGGAGA--------------------------ATACGACAAGGAAC..........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGA--------------------------ATACGACAAGGAACAATTGAGAAG................................3211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGA--------------------------ATACGACAAGGAACAA........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................TATA-TATCCATACTTCTTTCAGGCCGA........................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGA--------------------------ATACGACAAGGAACAATTGA....................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TAGACACCAGGCTGACATGAACATA................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAAGGAACAATTGAGA..................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................CCACCAAACGAGTATAATTATGACAT.................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................CAGGCTGACATGAACATC................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................AGGCTGACATGAACATC................................................................................................................................................................................................................1740.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................CAA-TATATTTTTGGAAACG.......................................................................................................................................................................................................................................................................................19100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droEre2
ATAGATACC---------ATTC-TGACACCATATGTTTCCTTAAC-ATATTAAATCA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTATCTTACAAATTTTAACTTA-TAACCTCACTTCTTGCAGGCTGATGGAGA--------------------------ATACGACAAGGAACAACTGAGAAGTAA------------T-TTCAAAT----TAAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATGGAGA--------------------------ATACGACAAGGAACA.........................................2412.0022000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGA--------------------------ATACGACAAGGAACA.........................................2112.0022000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGA--------------------------ATACGACAAGGAACAACT......................................2211.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACAAGGAACAACTGAGAATC...............................2311.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATGGAGA--------------------------ATACGACAAGGAACA.........................................2611.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGA--------------------------ATACGACAAGGAAC..........................................2111.0010000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGACAAGGAACAACTGAGA..................................2111.0010000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGA--------------------------ATACGACAAGGAACA.........................................2211.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTTCTTGCAGGCTGATGGAGA--------------------------........................................................2311.0010000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATGGAGA--------------------------ATACGACA................................................1911.0010000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA--------------------------ATACGACAAGGAACAACTGAGA..................................2411.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATGGAGA--------------------------ATACGACAAGGA............................................2311.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGA--------------------------ATACGACAAGGAACAAC.......................................2011.0011000000
droYak3
ACATTTTTCTT-----------------------------------------------------------------------------------------------------------------TGAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGACACTAGGCTGACATACATATATACATATTTCCT--------------------------------------------------------AGTTCATTATCTTACAATTTTTATTAAATTAACCATTGTTCTTGCAGGCGGATGGAGA--------------------------ATATGACAAGGAACAATTGAGAAGTAG------------T-TTTAAAT----AAAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGACAAGGAACAATTGAGAA.................................2212.00210000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGA--------------------------ATATGACAAGGAACA.........................................1911.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGA--------------------------ATATGACAAGGAACAATTGAGA..................................2711.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGA--------------------------ATATGACAAGGAACA.........................................1811.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACAAGGAACAATTGAGAATCC..............................2411.00110000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGACAAGGAACAATTGAGAAT................................2211.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------ATATGACAAGGAACAATTGAGAA.................................2411.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGAGA--------------------------ATATGACAAGGAACAA........................................2411.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGA--------------------------ATATGACAAGGAACA.........................................2211.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAAGTAG------------T-TTTAAAT----AA..1911.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGA--------------------------ATATGACAAGGAACAATTGA....................................2711.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA--------------------------ATATGACAAGGAACAATT......................................2011.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAGA--------------------------ATATGACAAGGA............................................1911.00100000010000
droEug1
TTAAATAAA---------GTCT-TAATAT-G--------------------------TATATATAATATAA-------TAAATATATCAAT---------------------------------------ATATAT-------------------------------------------------------------------------------------ATATATATTAAAAGCTAATAAAATAAGCTTTACTATACCATTTTAAATTTTAAAGTTAGTTTTAATCAATTTCCTAGAGTGT--GAAGTTGATATTCCTATTATAATCACT--GC--------------------------------------------------------------------------TTTTATAAGTTCATT-------------------------------------------------------------------------------------------------------------------------ATT----TTAASizeHit CountTotal NormTotal
No Reads
droBia1
TAACTTTTT---------A---------AAG--------------------------GATGCATCGCAGACTAATAT-----------------------------------------------------ATATATTAATATACTAATATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAATATATAATA-TGTAAATT-CTTTT---------------------------------------------------------------------------------------TT----AGTASizeHit CountTotal NormTotal
No Reads
droTak1
ATTTTTTTGTGTGTTC-T------------A------------------------------------------------------------------------------------------------------AATTAATTATTTAGCATTTGTTATTTATCAGATATTCCTTTTTTAAAAATGGGTTTTTATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCT--------TTCACACTTCTTGTAGGCGGATGGAGA--------------------------ATATGACAAGGAACAATTAAGAAGTAT------------G-------T----GAAASizeHit CountTotal NormTotal
No Reads
droEle1
TGTAAAAAAT--------TTAC-TGTTTTAAAATGTAATATATAT-ATATATATATATAT-------ATA--------------------TAAAATAT-A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATA--------------------------ATA-TACAAAAAACATT-----------------------------TT----TTAASizeHit CountTotal NormTotal
No Reads
droRho1
ATATTTTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATAAAATCTGACT--------------------------------------------------------------------------TAACATATCTTAAGTCTGTCAACTCTTTGCTAAGA-CAATGAGATTTGTTGGAGATCAAAGGATA--------------------------GTACCACAGAACACAGTAACTAAAAAA------------T-TGTTATT----GAAASizeHit CountTotal NormTotal
No Reads
droFic1
ATTTCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATTTTATAACA-CATGTGTT-ATTTTTCAGGGTGATGGGGA--------------------------ATATGACAAGGAACAATTGAGAAGTTT------------GTATA-CAC----TCAGSizeHit CountTotal NormTotal
No Reads
droKik1
ATATTAACA---------A--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----------TAATTTAT-ATATTACAGGCTGATGGTGA--------------------------ATACGACAAGGAACAACTGAGAAGTGA------------GTATCTGTT----TTGTSizeHit CountTotal NormTotal
No Reads
droAna3
ATATGCTTATAAAAACT-TTA-----------------------------------------------------------------------------------------------------------------------------ATATTTTA--------------------------ATAGTGTTATATTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----TATTGCT--------TTTA-TTTATTTTCAGTCTGACGCAGA--------------------------ATACGACAAAGAGCAACTTAGAAGTAT------------A--TTAATT----GGCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGA--------------------------ATACGACAAAGAGCA.........................................2013.003000030
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGACGCAGA--------------------------ATACGACAAAGAGCA.........................................2512.002100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGACAAAGAGCAACTTAG...................................2011.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGACGCAGA--------------------------ATACGACAAAGAGCA.........................................2711.001000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGACAAAGAGCAACTTAG...................................1911.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAAAGAGCAACTTAGAAT................................2111.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACGCAGA--------------------------ATACGACAAAGAGCA.........................................2411.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA--------------------------ATACGACAAAGAGCAACTTA....................................2211.001000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA--------------------------ATACGACAAAGAGCAACT......................................2011.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGACAAAGAGCAACTTAGAA.................................2311.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACGCAGA--------------------------ATACGACAAAGAGCAAC.......................................2611.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------ATACGACAAAGAGCAACTTAG...................................2211.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGCAGA--------------------------ATACGACAAAGAGCAAC.......................................2511.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGCAGA--------------------------ATACGACAAAGAGCAACT......................................2611.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGA--------------------------ATACGACAAAGAGCAACTTAG...................................2511.001100000
droBip1
TTATACTTACATATAC-C------------A-----------------------------------------------------------------------------------------------------------AAGTATTAATAATTTT--------------------------ATTGGGTTGTTCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTT-------AAA-TTTATTTTCAGTCTGACGCAGA--------------------------ATATGACAAAGAACAACTTAGAAGTATACTAATTGGTAAT-ATTA-AA----GAAASizeHit CountTotal NormTotal
No Reads
dp5
ATATATAAT---------ATAA-TATAACAATATATTACATACTC-TCTTATATATATAT-------ATATATTATATTCAAACTAACTATATATA-TATAT-ATATATTATATATTATTTTATATTATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATATATTATTATAATTA-----TT------------------------------------ATTATTATTATATACATATATA---TATTATATATTTA------------------------CTATATA-GTTTT---------------------------------------------------------------------------------------TC----TTATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
CACTATATATATATAT----------------------------------AT------------------------------------------------------------------------------ATATAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATATATTAGATAAATTATTAACAGTTATCTTATTTACATTTTATG-----------TAGCAATTTTTGGATTGCGTAATTTTTTATTTAAA-TTGTTAA------------CTAT---ATAATAATATATTAAACATTTATATATATATATATTATCTATTAATTTAGAACTAG------------T-ATAT-AA----AAAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTATATATATATATATT.................................................19200.051010000
droWil2
TTTTGAGCATATGTAC-------CTACATACAATTGGCCATACATTATAAATACACTCGT-------ACA--------------------GAAGACGC-ACACGTGAA----------------------------------TTTAGCCATTTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAATTAGATTTCCTTAAATTATTTTCT-GCTTCACAGGCCGA---AGA--------------------------GTACGATAAAGAGCAACTGAGAAGTGC------------GTAAGAAATTTGTGGGGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGATAAAGAGCAACT......................................1812.00220000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA---AGA--------------------------GTACGATAAAGAGCAACT......................................2311.00100100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACGATAAAGAGCAACTGAGA..................................2211.00100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGA---AGA--------------------------GTACGATAAA..............................................1911.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA--------------------------GTACGATAAAGAGCAACTGAG...................................2311.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGATAAAGAGCAACTGAGAAT................................2211.00110000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---AGA--------------------------GTACGATAAAGAGCA.........................................1911.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAGAGCAACTGAGAAT................................1811.00110000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------GTACGATAAAGAGCAACT......................................1911.00110000
droVir3
TATACTGTATATA--------------------------------------------------TTATATAATATAATATATATATAATTCTTATTT-ATAAT--------------------------------------------------------------------------------------------GTATATATTATATATGTA-------ATGTATATATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATATAAGAATT--------------------------ATAT-ATAATGTATATATTATACATAA------------G-AATTATA----TACASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
ATAATTAAT---------ATTACTTCTATTA--------------------------TATATATAATATAAAATAAAATAAATATATTTATTAATA-TAAAT-AAATGTAGAATATTTTTTTTTCGAATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAATATTTATATCACTT-------------------------------------------ATTTATATTTTTTAATTAAACATTTTAACTTTTTTTCATTTTTTTT--TTTTTAATTAAA-AATTTAAACTATATGTAGCTCGAAAGGAA--------------------------A------------------------------------------------------TSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
ACATATATT---------ATAT-ATATTTTATATATAATATATAT-ATATATATATA---------------------------TATGTATATATA-TATAT-AT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAGAAAAGCGT------------GCGTCGTATTTGAGTATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 07:15 PM