ID:

dsi_5694

 Coordinate:

2l:3034519-3034668 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.9 -4.8

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

AACCAAACAAAATGTCAAAATAAACGAGCAGTTAGTGCCTAAATCCACGCGTGAGTAGCTTCCAGGCCGTTTTCAACGATTTTCCCCACAGAATATTCGGTTTTTAAGTGCAATTACGTTTGTGTGAAAGAGAAGAAAAAATGTTTGCCTGTATTTGTGCTGTGATGCTGCTTCTTCTTCATCAATAGCTGCGACCGCCACACATTTGTTGTTATTCTTGTTGTTGTTGTTGCTATTATTGTTGTTGTGT
*******************************************************************************************...............((.((((..((((((.................)))))))))))).....*********************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 M023
head
 SRR553487
NRT_0-2 hours eggs
 O002
Head
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
............TGTGAAAAAAAACGAGCGGTT......................................................................................................................................................................................................................... 21 3 2 3.50 7 0 2 2 0 0 0 0 2 1
.........................................................................................................................................AAAATGTTTGCCTGTATT............................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................................................................................................AAAAAATGTTTGCCTGTATTT.............................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
...........................................................................................AATATTCGGTTTTTAAGTGCA.......................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................TTGTGCTGTGATGCTGCTTCT........................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......................................................TAGCTTCCAGCCCGTTTTCA............................................................................................................................................................................... 20 1 1 1.00 1 0 0 0 0 0 0 1 0 0
......................................................................................................................................................GTATTTGTGCTGTGATGCTGC............................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
........................................................................................................................................................................................................CACATTTGTTGTTATTCT................................ 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................ATCAATAGCTGCGACCGC.................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0
........................................................................................................................................................ATTTGTGCTGTGATGCTGC............................................................................... 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0
.......................................................................................................................................................................................................................TCTTGTTGTTGTTGTTGCTAT.............. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..........................................................................................................AGTGCAATTACGTTTGTGTGA........................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...................................................................................................................................GAAGAAAAAATGTTTGCCTGT.................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................CTTCTTCATCAATAGCTG........................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0
......................................................................TTTCAAAGATTTTCCCCATAGT.............................................................................................................................................................. 22 3 2 1.00 2 0 0 0 0 2 0 0 0 0
............TGTGAAAAAAAACGAGCGGT.......................................................................................................................................................................................................................... 20 3 7 0.29 2 0 0 0 0 2 0 0 0 0
..............................................................................................ATTCGATTTTTAAGTGCA.......................................................................................................................................... 18 1 5 0.20 1 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................................TTATTGTTGTTGTGT 15 0 14 0.14 2 0 0 2 0 0 0 0 0 0
................................................................................................................................................................................................................................TGTTGTTGCTATTAT........... 15 0 10 0.10 1 0 0 1 0 0 0 0 0 0
............TGTAAAAAAAAACGAGCGGTT......................................................................................................................................................................................................................... 21 3 14 0.07 1 0 0 0 0 0 0 0 0 1
.................................................AGTGATTAGCTTCCAGGCT...................................................................................................................................................................................... 19 3 16 0.06 1 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

TTGGTTTGTTTTACAGTTTTATTTGCTCGTCAATCACGGATTTAGGTGCGCACTCATCGAAGGTCCGGCAAAAGTTGCTAAAAGGGGTGTCTTATAAGCCAAAAATTCACGTTAATGCAAACACACTTTCTCTTCTTTTTTACAAACGGACATAAACACGACACTACGACGAAGAAGAAGTAGTTATCGACGCTGGCGGTGTGTAAACAACAATAAGAACAACAACAACAACGATAATAACAACAACACA
***********************************************************************************************...............((.((((..((((((.................)))))))))))).....******************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 M024
male body		 O002
Head
 SRR553486
Makindu_3 day-old ovaries
 M025
embryo
 M053
female body
 O001
Testis
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
.............CAGTTTGGTTTGCTCGTTAATCA...................................................................................................................................................................................................................... 23 3 1 2.00 2 2 0 0 0 0 0 0 0 0
........................................................................................................................ACACACTTTCTCTTCTTTTTTA............................................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0
..............................................................................................................................................................................CTGAGGTAGTTATCGACGCTGG...................................................... 22 3 1 1.00 1 0 1 0 0 0 0 0 0 0
......TGTTTTACAGTTTATTTTGCTCC............................................................................................................................................................................................................................. 23 3 1 1.00 1 1 0 0 0 0 0 0 0 0
................................................................................................................TAATGCAAACACACTTTCTC...................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0
............................................................................GCTAAAAGGGGTGTCTTATAAGC....................................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.....................................................TCATCGAAGGTCCGGCAAAAT................................................................................................................................................................................ 21 1 1 1.00 1 0 0 0 0 1 0 0 0 0
..................................................................................AGGGGTGTCTTATAAGCCAAA................................................................................................................................................... 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0
...........................................................................................................................................................................................................................CAACAACAACAACGATAATAAC......... 22 0 1 1.00 1 0 0 0 0 0 0 1 0 0
..................................................................................................................ATGCAAACACACTTT......................................................................................................................... 15 0 2 0.50 1 0 0 0 1 0 0 0 0 0
..................................................................GGCAAAAGTCGCTAAAAGGG.................................................................................................................................................................... 20 1 3 0.33 1 0 0 0 0 0 0 0 1 0
.................................................................GGGCAAAAGTCGCTAAAAGGG.................................................................................................................................................................... 21 2 5 0.20 1 0 0 0 0 0 0 0 1 0
.....................................................................................................................................................................ACGACAAAGAACAAGTAGT.................................................................. 19 2 6 0.17 1 0 0 0 1 0 0 0 0 0
..........................................................................................................................ACTCTTTCTCTTCTTTT............................................................................................................... 17 1 8 0.13 1 0 0 0 1 0 0 0 0 0
............................................................................................................................................................................AGAAGAAGTAGTTAG............................................................... 15 1 20 0.10 2 2 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................ACAACAACGATCATATCA........ 18 2 15 0.07 1 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................CAACAACAACGATCATATC......... 19 2 16 0.06 1 0 0 0 1 0 0 0 0 0
...........................................AGGTGCGCACTGATGG............................................................................................................................................................................................... 16 2 16 0.06 1 0 0 0 0 0 0 0 1 0
....................................................................CAAAAGTTGCTAGAA....................................................................................................................................................................... 15 1 19 0.05 1 0 0 0 0 0 0 0 0 1
..........................................................................TTACTAAAAGGGGTG................................................................................................................................................................. 15 1 20 0.05 1 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................TCGGCCCTGGCGGTGCGT.............................................. 18 3 20 0.05 1 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................................................................................AACAACAACGATCATATC......... 18 2 20 0.05 1 0 0 0 1 0 0 0 0 0
..............................................................................................................................................................................................................................CAACAACAACGATCAT............ 16 1 20 0.05 1 0 0 0 1 0 0 0 0 0
...........................................................................................................................................................................AAGAAGCAGTAGTTA................................................................ 15 1 20 0.05 1 0 0 0 0 0 0 0 1 0
..........................................................................................................................................................................................................CTAAACAACAATAAGA................................ 16 1 20 0.05 1 0 0 0 0 0 0 0 0 1
................................................................................................................................................................................................................................ACAACAACGATCATATC......... 17 2 20 0.05 1 0 0 0 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:3034469-3034718 - dsi_5694 AACCAAACAAAATGTCAAAATAAACGAGCAGTTAGTGCCTAAATCCACGCGTGAGTAGCTTCCAGGCCGTTTTCAACGATTTTCCCC-AC-AGAAT--ATTCGGTTTT-TAAGTGCAATTACGTTTGT-----GTGAAAGAGA----AG--A-AAAAATGTTT-GCC--TGTATTTGT-----GCTGTGATGCTGCTTCTTCT------TCATCA---ATAGCTGCGACCGCCACA------------CATT--TG----T---T------GTTATTCTTGTTG------TTGTTGTTGCTATTATTGTTGT-------TGT----GT-------
droSec2 scaffold_5:1311790-1312039 - AACCAAACAAAATGTCAAAATAAACGAGCAGTTAGTGCCTAAATCCACGCGTGAGTAGCTACCAGGCCGTTTTCAGCGATTTTCCCC-AC-AGAAT--ATTCGGTTTT-TAAGTGCAATTACGTTTGT-----GTGAAAGAGA----AG--A-AAAAATGTTT-GCC--TGTATTTGT-----GCTGTGATGCTGCTTCTTCT------TCATCA---ATAGCTGCGACCGCCACA------------CATT--TG----T---T------GTTATTCTTGTTG------TTGTTGTTGCTATTATTGTTGT-------TGG----GT-------
dm3 chr2L:3159300-3159543 - AACCAAACAAAATGTCAAAATAAACGAGCAGTTAGTGCCTAAATCCACGCGTGAGTAGCTTCCAGGCCGTTTTCAGCGATTTTCCCC-AC-AGAAT--ATTCGGTTTT-TAAGTGCAATTACGTTTGT-----GTGAAAGAGA----AG--A-AAAAATGTTT-GCC--TGTATTTGT-----GCTGTGATGCTGCTTCTTCT------TCATCC---ATAGCTACGACCGCCACA------------CATT--TG----T---T------GTTATTCT------TGT------TGTTGTTATTATTGTTGT-------TGT----GT-------
droEre2 scaffold_4929:3203597-3203843 - AACCAAACAAAATGTCGAAATAAACGAGCAGCAAGTGCTTAAATCCACGCGTGAGTAGCTTCCAGCCCGTTTTCACCGATTTTTCCC-AC-AGGAA--AATCGGTTTT-TAAGTGCAATTACGTTCGG-----GTGAAAGAGA----AG--AAAAAAATGTTT-GCC--TGTATTTGT-----GCTATGATGCTGCTTCTTCT------TTATC----ATAGCTGCGACCGCCACA------------CATT--TG----TTGTT------GTT------GTTCTTTT------AGTTGTTATTATTGTTGT-------TGT----AT-------
droYak3 2L:3156198-3156459 - AAGCAAACAAAATGTCGATATAAACAACCAGCAAGTGTCTAAATCTACGCGTGAGTAGCATCCAGCCCGTTTTCACCAATTTTTGCC-AC-AGGAA--AATCGGTTTT-TATGTGCAATTACGTTCGG-----GCGAAAGAGAAAG-AG--A-AAAAATGTTT-GCC--TGTATTTGT-----GCTTTGATGCTGCTTCTTCT------TCATC----ATAGCTGCGACCGCCACA------------CATT--TG----T---TGTTTTTGTTATTCTTGTTG------TTTTAGTT---ATTATTGTTGTTGTGTGTTGT----GT-------
droEug1 scf7180000409554:2930249-2930476 + AACCAATCAAAATGACGAAATAAATCAACAGGAAGTGTTTAAGTTGACGCGTAAGTATTCAACAGCAAGTTTCCATCCGTTTTTCCC-AG-AAGAA--AATCATTTTC-GAAGTGCAATTACGTTCGG-----GTGAAAGAGA----------AAAATTGTTT-GAT--TGTATTTGTAATATGCTATGATGTTGCTTCTTC---TTCTT----------CAATGCGACCGCCAC--------------TA---------T------------------------TGT------TGTTGCTCTTATTGTTGT-------TGT----GT-------
droBia1 scf7180000302188:2223596-2223815 - AAGCAAGCAAAATGTCGAAATAAACCAGCAGCAAGTGCTCAAATCCACGCGTGAGTAGTTAGCAGCGAGTTTTCACCCATTTTTCCC-AC-AAGAA--AAACGGTTTT-TAAATGCAATTACGTTCGG-----GAGAAAGAGA---------AAAAAATGTTT-GCC--TGTATTTGT-----GCTGTGCTTCTGCTGCTTC---TTCCT----------TGCTGCGACCGCCACA------------CTTT--CG----T---T------G------------------------------TTGTTGTTGT-------TGT----GT-------
droTak1 scf7180000415438:648477-648708 + AAGCGACCAAAATGTCGAAATAAACCAGCAGCAAGTGCTCAAATTCACGCGTGAGTAGTTAGCAGCGAGTTTTCACCGATTTTTCCC-AG-AAGAA--AATTGGTTTT-CAAGTGCAATTACGTTCGG-----GTGAAAGAGG----AG--AAAAAAATGTTT-GTC--TGTATTTGT-----GCTATGCTGCTGCTGCTGCTTCTTCTT----------CGCTGCGACCGCCACA------------CTTT--TG----T---------------------------------TGTTGCTGTTGTTTTTGT-------TGT----GT-------
droEle1 scf7180000491046:1857914-1858120 - AAGCAATAAAAATGTCCAAATAAACCAGCACAAAGTGCTCAAATACACGCGTGAGTAGTTACTAGCGAGTTTTCACCTATTTTTCCC-AA-AGGAA--AATCAGTTTT-TAAGTGCAATTACGTTAGG-----TTGAAGGAGG----GA--AGAAAAAAGTTT-GCC--TGTATTTGT-----GCTATGCTGCTGCTTCTTCT---TGTA----------CCT----------------------------------------------------------------------------------CTCTTGTTGTGTGTCGT--CGGT-------
droRho1 scf7180000779669:10278-10480 - AG-CATTAAAAATGTCCAAATAATCCAGCACAAAGTGCTCAAATATACGCGTGAGTAGTAACCAGCGAGTTTTCAACTATTTTTCGC-AA-AAGAA--AATCAGTTTT-TAAGTGCAATTACGTTCGG-----TTGAAAGAGG----GG--AGAAAAACGTTT-GCC--TGTATTTGT-----GCTATGCTGGTGCTTCTTCT---TATA---C----TTCGC-------------------------------------------------------------------------------TTGTTGTTGT-------TGT----GT-------
droFic1 scf7180000453924:1144947-1145163 - AACCAAACAAAATGTCAAAATAAACCCGCAATAAGTGCTTAAATTTACGCGTGAGTAGTTCACAATAAGATTTTATGGATTTTTCCC-AG-AAGAA--AATCAGTTTT-TTAGTGCAATTACGTTCGG-----GTGAAAGAGA----TGAGA-AAAAATGTTT-GTC--TGTATTTGT-----G-TATGGTGCTGCTTC------TTCTT----------CGCTGCGACCGCCACA------------C------------------------------------------------TGTTTTTGTTGTTGT-------TGT----GT-------
droKik1 scf7180000302246:375217-375445 - ACACAGCAAAAATGACAAAATAAACCCTCAGGGAGTGCTCACCTCCACGCGTAAGTAGTTCGCAACGAGTTTTCACCGATTTTTCCCTGA-AGAAA--AGACACTTTT-TGAGTGCAATTACGTTTGG------TGAAAAAGAGG--AG--AAAAAAATGTTT-CCT--TGTATTTGT-----GCTACGCTGCTGCTGCTTC---TTCTT----------CGTTGCGACCGCCACA------------CAAT--TG----T---T------GTTGTTTT------------------------------TGT-------TGTGGCGGT-------
droAna3 scaffold_12913:382026-382239 - TG-C-AACAAAATGAGCAAATAAAACAGCGGCGAGTGTTCACCATTACGCGTAAGTAGGTTGCACATCGATT-TAGCGATTTTCGCT-GA-GGGGA--AAACGATC-T-CAA--GCAACTACGTTG-G-----GTGAAAGAGG----AG--AGAAAAAAGTTT-CGTTGTGTATGTGT-----GCTACGCTGCTCCT-CTTC---TTCTC----------GGCTGCGACCGCGCCG------------T---------------------------------------------TGTTG---TTTTATTTG----------T-GTGGT-------
droBip1 scf7180000395178:732-927 + AGTCGAACAAAATGAGCAAATAAATCAGCGGCGAGTGTTCACTATTACGCGTAAGTAGGTTGCACATCGATTTTCGCGTTTTTTCGT-GG-AAGGA--AGACGATC-T-TAA--GCAACTACGTTG-G-----GTGAAAGAGG----AG--AGAAAAAAGTTG-CCCTGTGTATGTGT-----GCTACGCTGCTCCT-CTTC---TTCTC----------CCC----------A---------------------------------------------------------------------TG--TTTG----------T-GTGGT-------
dp5 4_group4:1447158-1447395 + ATCTGATAAAAATGACGAAATAAATCTGCCGGAAGTGTTCGATTTTACGCGTGAGTAGCATTCGCCAAGTTTTCTATGATTTTTCCC-AG-CCAAA--AA---------------CAACATCACCT-G-----GTGAAAGAAAAAGAAG--A-AAAAATTTTT-TCT-------------------AC------GCTTC------TTCTT----------CGCTGCGACCGCG-CGCTGCTTCTGCTG----CTGCTCTGGTGTT------GTTGTCCT------TGTTGTTGGTGTTA------GTATTATATAGTGCCAT----GCTCCTCTG
droPer2 scaffold_10:448814-449061 + ATCTGATAAAAATGACGAAATAAATCTGCCGGAAGTGTTCGATTTTACGCGTGAGTAGCATTCGCAAAGTTTTCTATGATTTTTCCC-AG-CCAAA--AACAA---CA-TCAGTGCAATTACGTTTGGACCTGGTGAAAGAAAAAGAAG--A-AAAAATTTTT-TCT-------------------AC------GCTTC------TTCTT----------CGCTGCGACCGCG-CGCTGCTTCTGCTG----CTGCTCTGGTGTT------GTTGTCCT------TGTTGTTGGTGTTA------GTATTATATAGTGCCAT----GC-------
droVir3 scaffold_12963:20118431-20118662 - GAGTAAACAAACTGGCCACAAAAGCGGACCACAAGTGTTGAATTGTACGCGTGAGTAGCTTTCAAACAGTTTTATGTGCATTTCCAT-TG-CAAAAATAAGCACAGTA-GCAGTGCAATTACGTTTGG-----CTGAAAGA-------------AAAATTTTT-TCT--T---CTCAT-----ACTACGCT---ACTTC------TTATTCGCTG---CGCGCTGCTGCCGAAAGA------------GTCT--TGCCTGGCGTC------G---------T------------TGTTGTTGTTGTTGTTTT-------TGT----AT-------
droMoj3 scaffold_6500:23094740-23094983 + AAGTAAACAAACTGGCTACCAAAGCAGACCACAAGTGTTAAATTGTACGCGTGAGTAGATTTCAAACAGATTTATGTGCATATCCAA-TGGCAAATTTAAGCACAGCA-GCAGTGCAATTACGTTTGG-----TGGAAAGA--------------AAATTTTTTTCT-----TCTCAT-----ACTACACTGCTT---C------CCATTCGCTGCGCGCTGCTGCTGCCGAAAGA------------GTCTCTTGGCTAGCGTC------G---------TCGTTGT------TGTTGTTGTTTTTGGTGT-------TGT----AT-------
droGri2 scaffold_15252:11562399-11562641 - AAGTAAACAAACTGGCCACAAAAACGGACCACAAGTGTTCAATTGTACGCGTGAGTAGCATTCAAACAGTTTTATGTGCATTTCCAT-TG-CAAATCTAAGCACCGTAGTCAGTGCAATTACGTTTGG-----TTGAA----------G--A-AAAAATTTTTTTCT-----TCTCAT-----ACTACACT---ACTTC------TTATTCGCTG---CGCGCTGCTGCCGAAAGA------------GACT--TGGCTGGCGTC------GCC------GTTGTTGT------TGTTGTTGTTATTGGTGT-------TGT----AT-------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AACCAAACAAAATGTCAAAATAAACGAGCAGTTAGTGCCTAAATCCACGCGTGAGTAGCTTCCAGGCCGTTTTCAACGATTTTCCCC-AC-AGAAT--ATTCGGTTTT-TAAGTGCAATTACGTTTGT-----GTGAAAGAGA----AG--A-AAAAATGTTT-GCC--TGTATTTGT-----GCTGTGATGCTGCTTCTTCT------TCATCA---ATAGCTGCGACCGCCACA------------CATT--TG----T---T------GTTATTCTTGTTG------TTGTTGTTGCTATTATTGTTGT-------TGT----GT-------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................AAAATGTTT-GCC--TGTATT................................................................................................................................................................1811.00101000000000000000
.......................................................................................................................................................A-AAAAATGTTT-GCC--TGTATTT...............................................................................................................................................................2111.00101000000000000000
.............................................................................................AAT--ATTCGGTTTT-TAAGTGCA..........................................................................................................................................................................................................................2111.00100000010000000000
..............................................................................................................................................................................TTGT-----GCTGTGATGCTGCTTCT.......................................................................................................................................2111.00101000000000000000
..........................................................................................................................................................................GTATTTGT-----GCTGTGATGCTGC...........................................................................................................................................2111.00100000000001000000
..........................................................................................................................................................................................................................................CA------------CATT--TG----T---T------GTTATTCT........................................................1811.00100000010000000000
...................................................................................................................................................................................................................ATCA---ATAGCTGCGACCGC.......................................................................................................1811.00110000000000000000
............................................................................................................................................................................ATTTGT-----GCTGTGATGCTGC...........................................................................................................................................1911.00100000100000000000
....................................................................................................................................................................................................................................................................................TCTTGTTG------TTGTTGTTGCTAT................................2111.00101000000000000000
...............................................................................................................AGTGCAATTACGTTTGT-----GTGA......................................................................................................................................................................................................2111.00100000010000000000
.............................................................................................................................................GA----AG--A-AAAAATGTTT-GCC--TGT...................................................................................................................................................................2111.00101000000000000000
......................................................................................................................................................................................................CTTCT------TCATCA---ATAGCTG..............................................................................................................1811.00110000000000000000
..............................................................................................................................................................................................................................................................................................................TTATTGTTGT-------TGT----GT-------15140.14200000000002000000
...................................................................................................................................................................................................................................................................................................TGTTGTTGCTATTAT.............................15100.10100000000001000000
droSec2
AACCAAACAAAATGTCAAAATAAACGAGCAGTTAGTGCCTAAATCCACGCGTGAGTAGCTACCAGGCCGTTTTCAGCGATTTTCCCC-AC-AGAAT--ATTCGGTTTT-TAAGTGCAATTACGTTTGT-----GTGAAAGAGA----AG--A-AAAAATGTTT-GCC--TGTATTTGT-----GCTGTGATGCTGCTTCTTCT------TCATCA---ATAGCTGCGACCGCCACA------------CATT--TG----T---T------GTTATTCTTGTTG------TTGTTGTTGCTATTATTGTTGT-------TGG----GT-------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..................AATAAACGAGCAGTTAGTGCC........................................................................................................................................................................................................................................................................................................2111.0010100
............TGTCAAAATAAACGAGCAGTT..............................................................................................................................................................................................................................................................................................................2111.0010100
......................................................................................................................................................................................................................................................................................................TGTTGCTATTATTGTTGT-------TGG----.........2111.0010001
.................................AGTGCCTAAATCCACGCGT...........................................................................................................................................................................................................................................................................................1911.0010010
.........................................................................................................................CGTTTGT-----GTGAAAGAGA----AG--A-......................................................................................................................................................................................2011.0010001
........................................................................................................TTTT-TAAGTGCAATTACGTT..................................................................................................................................................................................................................2011.0011000
.................................................................................TTCCCC-AC-AGAAT--ATTCGGTT.....................................................................................................................................................................................................................................2111.0011000
.................................................................................................................................................................................................................TCATCA---ATAGCTGCGACCGCC......................................................................................................2111.0010001
................................................................................................................................................................................................................................................................................TTATTCTTGTTG------TTGTTG.......................................1820.5010100
dm3
AACCAAACAAAATGTCAAAATAAACGAGCAGTTAGTGCCTAAATCCACGCGTGAGTAGCTTCCAGGCCGTTTTCAGCGATTTTCCCC-AC-AGAAT--ATTCGGTTTT-TAAGTGCAATTACGTTTGT-----GTGAAAGAGA----AG--A-AAAAATGTTT-GCC--TGTATTTGT-----GCTGTGATGCTGCTTCTTCT------TCATCC---ATAGCTACGACCGCCACA------------CATT--TG----T---T------GTTATTCT------TGT------TGTTGTTATTATTGTTGT-------TGT----GT-------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................GTTTGT-----GTGAAAGAGA----AG--A-AA....................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
.......................................................................................................................TACGTTTGT-----GTGAAAGAG.................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AAACGAGCAGTTAGTGCCT.......................................................................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000001000000
................AAAATAAACGAGCAGTTAGTGCCT.......................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TAAACGAGCAGTTAGTGCCTA......................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.....................AAACGAGCAGTTAGTGCCTAAATCC.................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CAAAATGTCAAAATAAACGAG...................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AAATAAACGAGCAGTTAGTGC.........................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000010
..............TCAAAATAAACGAGCAGTTAG............................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
...................ATAAACGAGCAGTTAGTGCCTA......................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................CCCC-AC-AGAAT--ATTCGGTTTT-TAAG..............................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................TTT-GCC--TGTATTTGT-----GCTGTGA.................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................T-----GCTGTGATGCTGCTTCTTC.....................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................CGTTTGT-----GTGAAAGAGA----AG--A-A.....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................................................................................................GTTTGT-----GTGAAAGAGA----AT--........................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AAATGTCAAAATAAACGAGCA.................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................TTGTTATTATTGTTGT-------TGT----GT-------2111.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TGT-----GCTGTGATGCTGCTTCTT......................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TAAACGAGCAGTTAGTGCCTAA.....................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................ATTCT------TGT------TGTTGTTATTATTGT..........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AATAAACGAGCAGTTAGTGCC........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
..................AATAAACGAGCAGTTAGTGCCT.......................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................................................................................................CGTTTGT-----GTGAAAGAGA----AG--A-AAAAA.................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TT--TG----T---T------GTTATTCT------TGT------TGTTG....................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................AAACGAGCAGTTAGTGCCTAAATC..................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................AAATAAACGAGCAGTTAGTGCC........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................CCACGCGTGAGTAGCTTCCAGT.............................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
...................ATAAACGAGCAGTTAGTGCCT.......................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AACGAGCAGTTAGTGCCTAAA....................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................ATTCT------TGT------TGTTGTTATTATT............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................TTT-TAAGTGCAATTACGTTTG................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TTTGT-----GTGAAAGAGA----AG--A-AA....................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................CGAGCAGTTAGTGCCTAAATCCA................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CCTAAATCCACGCGTGAGTA......................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................GTTATTCT------TGT------TGTTGTTATT...............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AAACGAGCAGTTAGTGCCTA......................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
....................TAAACGAGCAGTTAGTGCCT.......................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................ATTACGTTTGT-----GTGAAAGAGA----............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.....................................CCTAAATCCACGCGTGAGTAG.....................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................................................G--A-AAAAATGTTT-GCC--TGTATT................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AAATGTCAAAATAAACGAGC..................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ATAAACGAGCAGTTAGTG..........................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
......................................................GTAGCTTCCAGGCCGTTTTC.....................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AAATAAACGAGCAGTTAGTGCCTAA.....................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
....................................................................................................................AATTACGTTTGT-----GTGAAAGAGA----............................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................CGAGCAGTTAGTGCCTAAATC..................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
....................TAAACGAGCAGTTAGTGCC........................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AAACGAGCAGTTAGTGCCTAAA....................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................ATCCACGCGTGAGTAGCTTCCA...............................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................AATCCACGCGTGAGTAGCTTC.................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................TTGT-----GTGAAAGAGA----AG--A-AAAA..................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................AAAATAAACGAGCAGTTAGTGC.........................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.......................................................................TTCAGCGATTTTCCCC-AC-AGA.................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..........AATGTCAAAATAAACGAGCA.................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................GCC--TGTATTTGT-----GCTGTGATGCTGC...........................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................AATGTTT-GCC--TGTATTTGT-----GC......................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................GCTTCTTCT------TCATCC---ATAGCT...............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ACGAGCAGTTAGTGCCTAAATC..................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................AGTGCCTAAATCCACGCGTGA.........................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................CCACGCGTGAGTAGCTTCCAG..............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................TAAGTGCAATTACGTTTG................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................T------TGT------TGTTGTTATTATTGTTG........................2170.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................TGT------TGTTGTTATTATTGTTGT-------................2170.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................GT------TGTTGTTATTATTGTTGT-------T...............2180.2520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
droEre2
AACCAAACAAAATGTCGAAATAAACGAGCAGCAAGTGCTTAAATCCACGCGTGAGTAGCTTCCAGCCCGTTTTCACCGATTTTTCCC-AC-AGGAA--AATCGGTTTT-TAAGTGCAATTACGTTCGG-----GTGAAAGAGA----AG--AAAAAAATGTTT-GCC--TGTATTTGT-----GCTATGATGCTGCTTCTTCT------TTATC----ATAGCTGCGACCGCCACA------------CATT--TG----TTGTT------GTT------GTTCTTTT------AGTTGTTATTATTGTTGT-------TGT----AT-------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
AAGCAAACAAAATGTCGATATAAACAACCAGCAAGTGTCTAAATCTACGCGTGAGTAGCATCCAGCCCGTTTTCACCAATTTTTGCC-AC-AGGAA--AATCGGTTTT-TATGTGCAATTACGTTCGG-----GCGAAAGAGAAAG-AG--A-AAAAATGTTT-GCC--TGTATTTGT-----GCTTTGATGCTGCTTCTTCT------TCATC----ATAGCTGCGACCGCCACA------------CATT--TG----T---TGTTTTTGTTATTCTTGTTG------TTTTAGTT---ATTATTGTTGTTGTGTGTTGT----GT-------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................TTACGTTCGG-----GCGAAAGAGAAAG-AG--A-A.....................................................................................................................................................................................2711.00100000010000
......................AACAACCAGCAAGTGTCTAAATC..................................................................................................................................................................................................................................................................................................2311.00100100000000
................GATATAAACAACCAGCAAGTGT.........................................................................................................................................................................................................................................................................................................2211.00100000010000
.............................................TACGCGTGAGTAGCATCCAGC.............................................................................................................................................................................................................................................................................2111.00101000000000
................................................................................................................................................................................................................................................................................................................ATTGTTGTTGTGTGTTGT----.........1820.50101000000000
droEug1
AACCAATCAAAATGACGAAATAAATCAACAGGAAGTGTTTAAGTTGACGCGTAAGTATTCAACAGCAAGTTTCCATCCGTTTTTCCC-AG-AAGAA--AATCATTTTC-GAAGTGCAATTACGTTCGG-----GTGAAAGAGA----------AAAATTGTTT-GAT--TGTATTTGTAATATGCTATGATGTTGCTTCTTC---TTCTT----------CAATGCGACCGCCAC--------------TA---------T------------------------TGT------TGTTGCTCTTATTGTTGT-------TGT----GT-------SizeHit CountTotal NormTotal
No Reads
droBia1
AAGCAAGCAAAATGTCGAAATAAACCAGCAGCAAGTGCTCAAATCCACGCGTGAGTAGTTAGCAGCGAGTTTTCACCCATTTTTCCC-AC-AAGAA--AAACGGTTTT-TAAATGCAATTACGTTCGG-----GAGAAAGAGA---------AAAAAATGTTT-GCC--TGTATTTGT-----GCTGTGCTTCTGCTGCTTC---TTCCT----------TGCTGCGACCGCCACA------------CTTT--CG----T---T------G------------------------------TTGTTGTTGT-------TGT----GT-------SizeHit CountTotal NormTotal
No Reads
droTak1
AAGCGACCAAAATGTCGAAATAAACCAGCAGCAAGTGCTCAAATTCACGCGTGAGTAGTTAGCAGCGAGTTTTCACCGATTTTTCCC-AG-AAGAA--AATTGGTTTT-CAAGTGCAATTACGTTCGG-----GTGAAAGAGG----AG--AAAAAAATGTTT-GTC--TGTATTTGT-----GCTATGCTGCTGCTGCTGCTTCTTCTT----------CGCTGCGACCGCCACA------------CTTT--TG----T---------------------------------TGTTGCTGTTGTTTTTGT-------TGT----GT-------SizeHit CountTotal NormTotal
No Reads
droEle1
AAGCAATAAAAATGTCCAAATAAACCAGCACAAAGTGCTCAAATACACGCGTGAGTAGTTACTAGCGAGTTTTCACCTATTTTTCCC-AA-AGGAA--AATCAGTTTT-TAAGTGCAATTACGTTAGG-----TTGAAGGAGG----GA--AGAAAAAAGTTT-GCC--TGTATTTGT-----GCTATGCTGCTGCTTCTTCT---TGTA----------CCT----------------------------------------------------------------------------------CTCTTGTTGTGTGTCGT--CGGT-------SizeHit CountTotal NormTotal
No Reads
droRho1
AG-CATTAAAAATGTCCAAATAATCCAGCACAAAGTGCTCAAATATACGCGTGAGTAGTAACCAGCGAGTTTTCAACTATTTTTCGC-AA-AAGAA--AATCAGTTTT-TAAGTGCAATTACGTTCGG-----TTGAAAGAGG----GG--AGAAAAACGTTT-GCC--TGTATTTGT-----GCTATGCTGGTGCTTCTTCT---TATA---C----TTCGC-------------------------------------------------------------------------------TTGTTGTTGT-------TGT----GT-------SizeHit CountTotal NormTotal
No Reads
droFic1
AACCAAACAAAATGTCAAAATAAACCCGCAATAAGTGCTTAAATTTACGCGTGAGTAGTTCACAATAAGATTTTATGGATTTTTCCC-AG-AAGAA--AATCAGTTTT-TTAGTGCAATTACGTTCGG-----GTGAAAGAGA----TGAGA-AAAAATGTTT-GTC--TGTATTTGT-----G-TATGGTGCTGCTTC------TTCTT----------CGCTGCGACCGCCACA------------C------------------------------------------------TGTTTTTGTTGTTGT-------TGT----GT-------SizeHit CountTotal NormTotal
No Reads
droKik1
ACACAGCAAAAATGACAAAATAAACCCTCAGGGAGTGCTCACCTCCACGCGTAAGTAGTTCGCAACGAGTTTTCACCGATTTTTCCCTGA-AGAAA--AGACACTTTT-TGAGTGCAATTACGTTTGG------TGAAAAAGAGG--AG--AAAAAAATGTTT-CCT--TGTATTTGT-----GCTACGCTGCTGCTGCTTC---TTCTT----------CGTTGCGACCGCCACA------------CAAT--TG----T---T------GTTGTTTT------------------------------TGT-------TGTGGCGGT-------SizeHit CountTotal NormTotal
No Reads
droAna3
TG-C-AACAAAATGAGCAAATAAAACAGCGGCGAGTGTTCACCATTACGCGTAAGTAGGTTGCACATCGATT-TAGCGATTTTCGCT-GA-GGGGA--AAACGATC-T-CAA--GCAACTACGTTG-G-----GTGAAAGAGG----AG--AGAAAAAAGTTT-CGTTGTGTATGTGT-----GCTACGCTGCTCCT-CTTC---TTCTC----------GGCTGCGACCGCGCCG------------T---------------------------------------------TGTTG---TTTTATTTG----------T-GTGGT-------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................ACTACGTTG-G-----GTGAAAGAGG----A...........................................................................................................................................................................................2111.001000010
.................................................................................................................................................................................T-----GCTACGCTGCTCCT-CTTC---TT................................................................................................................................2111.001100000
droBip1
AGTCGAACAAAATGAGCAAATAAATCAGCGGCGAGTGTTCACTATTACGCGTAAGTAGGTTGCACATCGATTTTCGCGTTTTTTCGT-GG-AAGGA--AGACGATC-T-TAA--GCAACTACGTTG-G-----GTGAAAGAGG----AG--AGAAAAAAGTTG-CCCTGTGTATGTGT-----GCTACGCTGCTCCT-CTTC---TTCTC----------CCC----------A---------------------------------------------------------------------TG--TTTG----------T-GTGGT-------SizeHit CountTotal NormTotal
No Reads
dp5
ATCTGATAAAAATGACGAAATAAATCTGCCGGAAGTGTTCGATTTTACGCGTGAGTAGCATTCGCCAAGTTTTCTATGATTTTTCCC-AG-CCAAA--AA---------------CAACATCACCT-G-----GTGAAAGAAAAAGAAG--A-AAAAATTTTT-TCT-------------------AC------GCTTC------TTCTT----------CGCTGCGACCGCG-CGCTGCTTCTGCTG----CTGCTCTGGTGTT------GTTGTCCT------TGTTGTTGGTGTTA------GTATTATATAGTGCCAT----GCTCCTCTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............TGACGAAATAAATCTGCCGGAAGTG..........................................................................................................................................................................................................................................................................................................2513.0030000000030
.........................CTGCCGGAAGTGTTCGATTT..................................................................................................................................................................................................................................................................................................2012.0020200000000
.................................................................................................................................................................TT-TCT-------------------AC------GCTTC------TTCTT----------CGC................................................................................................................2011.0010100000000
..................................................................................................................................................................................................................................................................................................TTGGTGTTA------GTATTATATAG...................2011.0010100000000
..................AATAAATCTGCCGGAAGT...........................................................................................................................................................................................................................................................................................................1811.0010010000000
...........................GCCGGAAGTGTTCGATTTTACGCGT...........................................................................................................................................................................................................................................................................................2511.0010000100000
.TCTGATAAAAATGACGAAATAAATCTGCC.................................................................................................................................................................................................................................................................................................................2911.0010010000000
......................AATCTGCCGGAAGTGTTCG......................................................................................................................................................................................................................................................................................................1911.0010000100000
.............................................TACGCGTGAGTAGCATTCGCC.............................................................................................................................................................................................................................................................................2111.0010100000000
droPer2
ATCTGATAAAAATGACGAAATAAATCTGCCGGAAGTGTTCGATTTTACGCGTGAGTAGCATTCGCAAAGTTTTCTATGATTTTTCCC-AG-CCAAA--AACAA---CA-TCAGTGCAATTACGTTTGGACCTGGTGAAAGAAAAAGAAG--A-AAAAATTTTT-TCT-------------------AC------GCTTC------TTCTT----------CGCTGCGACCGCG-CGCTGCTTCTGCTG----CTGCTCTGGTGTT------GTTGTCCT------TGTTGTTGGTGTTA------GTATTATATAGTGCCAT----GC-------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................TAAATCTGCCGGAAGTGTTC.......................................................................................................................................................................................................................................................................................................2012.002200000
.............GACGAAATAAATCTGCCGGA..............................................................................................................................................................................................................................................................................................................2011.001100000
................................................................................................................GTGCAATTACGTTTGGACCTG..........................................................................................................................................................................................................2111.001010000
droVir3
GAGTAAACAAACTGGCCACAAAAGCGGACCACAAGTGTTGAATTGTACGCGTGAGTAGCTTTCAAACAGTTTTATGTGCATTTCCAT-TG-CAAAAATAAGCACAGTA-GCAGTGCAATTACGTTTGG-----CTGAAAGA-------------AAAATTTTT-TCT--T---CTCAT-----ACTACGCT---ACTTC------TTATTCGCTG---CGCGCTGCTGCCGAAAGA------------GTCT--TGCCTGGCGTC------G---------T------------TGTTGTTGTTGTTGTTTT-------TGT----AT-------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................CACAAAAGCGGACCACAAGTGTTGAATT...................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
...................AAAAGCGGACCACAAGTG..........................................................................................................................................................................................................................................................................................................1811.001000000001000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................CT---ACTTC------TTATTCGCTG---CGCG.................................................................................................................2111.001000000000000000000000000010000000000000000000000000000000000000
.........AACTGGCCACAAAAGCGG....................................................................................................................................................................................................................................................................................................................1811.001000000000010000000000000000000000000000000000000000000000000000
..GTAAACAAACTGGCCACAAAAGCGGAC..................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..........ACTGGCCACAAAAGCGGACCACA..............................................................................................................................................................................................................................................................................................................2311.001000000000000000000000010000000000000000000000000000000000000000
................CACAAAAGCGGACCACAAGTGTTGA......................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..............GCCACAAAAGCGGACCACAA.............................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.............GGCCACAAAAGCGGACCACAAGTGTT........................................................................................................................................................................................................................................................................................................2611.001000000000000001000000000000000000000000000000000000000000000000
.........AACTGGCCACAAAAGCGGACC.................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
.................ACAAAAGCGGACCACAAGTGT.........................................................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
................CACAAAAGCGGACCACAAG............................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000001000000000000000000000000000
.............GGCCACAAAAGCGGACCACA..............................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................ATTACGTTTGG-----CTGAAAGA-------------AA...................................................................................................................................................................................2111.001000000001000000000000000000000000000000000000000000000000000000
...........................ACCACAAGTGTTGAATTG..................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000010000000000000000000000000000000000000
................CACAAAAGCGGACCACAAGTG..........................................................................................................................................................................................................................................................................................................2111.001000000000000100000000000000000000000000000000000000000000000000
..............GCCACAAAAGCGGACCACAAGTG..........................................................................................................................................................................................................................................................................................................2311.001000000000000000000010000000000000000000000000000000000000000000
........................CGGACCACAAGTGTTGAATTGTA................................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
..........ACTGGCCACAAAAGCGGA...................................................................................................................................................................................................................................................................................................................1811.001000000001000000000000000000000000000000000000000000000000000000
...................AAAAGCGGACCACAAGTGTTGAATT...................................................................................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................CTTC------TTATTCGCTG---CGCGCTG..............................................................................................................2111.001000000000000000000000000000000100000000000000000000000000000000
...................AAAAGCGGACCACAAGTGTTGA......................................................................................................................................................................................................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
droMoj3
AAGTAAACAAACTGGCTACCAAAGCAGACCACAAGTGTTAAATTGTACGCGTGAGTAGATTTCAAACAGATTTATGTGCATATCCAA-TGGCAAATTTAAGCACAGCA-GCAGTGCAATTACGTTTGG-----TGGAAAGA--------------AAATTTTTTTCT-----TCTCAT-----ACTACACTGCTT---C------CCATTCGCTGCGCGCTGCTGCTGCCGAAAGA------------GTCTCTTGGCTAGCGTC------G---------TCGTTGT------TGTTGTTGTTTTTGGTGT-------TGT----AT-------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................GTGCAATTACGTTTGG-----TGGAAAGA--------------A...................................................................................................................................................................................2511.001000001
......ACAAACTGGCTACCAAAGC......................................................................................................................................................................................................................................................................................................................1911.001000010
...TAAACAAACTGGCTACCAAAG.......................................................................................................................................................................................................................................................................................................................2111.001100000
.........................AGACCACAAGTGTTAAATTGTACGCG............................................................................................................................................................................................................................................................................................2611.001000010
..................................................................................................................................................................................................................CGCTGCGCGCTGCTGCTG...........................................................................................................1820.501000010
droGri2
AAGTAAACAAACTGGCCACAAAAACGGACCACAAGTGTTCAATTGTACGCGTGAGTAGCATTCAAACAGTTTTATGTGCATTTCCAT-TG-CAAATCTAAGCACCGTAGTCAGTGCAATTACGTTTGG-----TTGAA----------G--A-AAAAATTTTTTTCT-----TCTCAT-----ACTACACT---ACTTC------TTATTCGCTG---CGCGCTGCTGCCGAAAGA------------GACT--TGGCTGGCGTC------GCC------GTTGTTGT------TGTTGTTGTTATTGGTGT-------TGT----AT-------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 04:24 AM