ID:

dsi_5665

 Coordinate:

3r:14548864-14549013 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-2.7 -2.1 -2.0

Flybase annnotation

CDS [3r_14549014_14549485_-]; exon [3r_14549014_14549485_-]; intron [3r_14548697_14549013_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GATAAAGCCCGGAGCAGTGGTCATCGATTGCGGCATCAATGTGAAGCCAGGTGAGTGATGGTTATCCCTTATCAGTTGACTGGCAATCCCAGTGAATATCCAATGGATAATCTAAAGACTTGCTTTAACATATTTTCTAATCTGTGGAACCAAACGTTTCCACTTGTTTACTGATAAAGCCATCAATCGCTTATCAACGCATCCGACCCCCTAGTGGAATAAGAAACCGACCCCGACCCCCGACGATAAG
******************************************************************************************************.((((.(((.(((((.....)))))....))).))))............*************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 M024
male body
...............AGTGGTCATCGATTGCGGC........................................................................................................................................................................................................................ 19 0 1 2.00 2 2 0 0 0 0 0
..................GGTCATCGATTGCGGCATCA.................................................................................................................................................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0
..................................................................................................................................TATTTTCTAATCTGTGGAACC................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
.............GCAGTGGTCATCGATTGC........................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................ATGGATAATCTAAAGACTTGC............................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0
...........GAGCAGTGGTCATCGATTGCGGC........................................................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................................CATATTTTCTAATCTGTGGAACC................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
.......................TCGATTGCGGCATCAATGTGAAGCCA......................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0
........CCGGAGCAGTGGTCATCGATTG............................................................................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0
.....................CATCGATTGCGGCATCAATGTGAAGC........................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0 0
.....................CATCGATTGCGGCATCAATGTGAA............................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0
.........................................................................................GAGTGGATATTCAATGGAT.............................................................................................................................................. 19 3 20 0.15 3 0 0 0 0 3 0
.........................................................................................................................................................................................................................AATAAGAATGCGACCCCG............... 18 2 7 0.14 1 0 0 1 0 0 0
..................................ATCAATGTGAAGCCAGAC...................................................................................................................................................................................................... 18 2 8 0.13 1 0 0 0 0 0 1
..........................................................................................AGTGGATATTCAATGGAT.............................................................................................................................................. 18 2 11 0.09 1 0 0 0 0 1 0
...........AAACACTGGTCATCGATTGC........................................................................................................................................................................................................................... 20 3 13 0.08 1 0 0 0 1 0 0

Anti-sense strand reads

CTATTTCGGGCCTCGTCACCAGTAGCTAACGCCGTAGTTACACTTCGGTCCACTCACTACCAATAGGGAATAGTCAACTGACCGTTAGGGTCACTTATAGGTTACCTATTAGATTTCTGAACGAAATTGTATAAAAGATTAGACACCTTGGTTTGCAAAGGTGAACAAATGACTATTTCGGTAGTTAGCGAATAGTTGCGTAGGCTGGGGGATCACCTTATTCTTTGGCTGGGGCTGGGGGCTGCTATTC
***************************************************************************************************.((((.(((.(((((.....)))))....))).))))............****************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M023
head
 SRR553486
Makindu_3 day-old ovaries
.............................................................................CTCAACGTTAGGGTCTCTTA......................................................................................................................................................... 20 3 10 1.40 14 9 0 0 5 0
...........................................................................................................................................................................................................................ATTCTTCGGCTGGGGC............... 16 1 2 1.00 2 0 2 0 0 0
.................................................................GGGAATAGTCAAGTG.......................................................................................................................................................................... 15 1 5 0.40 2 0 0 2 0 0
........................................................................................................................................................TTTCAAAGGTGAACAAATCA.............................................................................. 20 2 5 0.20 1 1 0 0 0 0
..............................................................ATAGGGGATAGTCAA............................................................................................................................................................................. 15 1 6 0.17 1 0 0 1 0 0
...............................................................TAGGGAATAGTCAAG............................................................................................................................................................................ 15 1 12 0.17 2 0 0 2 0 0
.........................................................................TCAACTGACCGTCAGGGCCACT........................................................................................................................................................... 22 2 19 0.11 2 0 0 0 0 2
.......................................................................................................................................................................................................GGACGCTGGGGGATCA................................... 16 2 12 0.08 1 0 0 0 0 1
..................................................................................................................................................CTTGGTATGCAAATGTCAA..................................................................................... 19 3 17 0.06 1 0 0 1 0 0
....................................................................................................................................AAAAGATGTGATACCTTGG................................................................................................... 19 3 17 0.06 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:14548814-14549063 - dsi_5665 GATAAAGCCCGGAGCAGTGGTCATCGATTGCGGCATCAATGTGAAGCCAGGTGAGTGAT---GGTT--------ATCCCTTATCAGT---------------------------------------TGACTGGCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCAGTGAATATCCAATGGATAA---------------------------------------------------------------------TCTAAAGACTTGCTTTAACAT------ATTTTCTA-ATCT------------------------GTGGAA-CCAAACGTTTCCACTTGTT--TACTGATAAAGCCATC----AATCGCTTATCAACGCATCCG------------ACCCCCT---AGTGGAATAAGAAACCG-----------ACCC-CGACCCCCG------------------ACGATAAG------
droSec2 scaffold_0:15415180-15415418 - GATAAAGCCCGGAGCAGTGGTCATCGATTGCGGCATCAATGTGAAGCCAGGTGAGTGAT---AGTT--------ATCCCTTATCAGT---------------------------------------TGACTGGCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCAGTGAAAATCCAATGGATAA---------------------------------------------------------------------TCTAAAGACTTGCTTGAACAT------ATTTTATA-ATCT------------------------GTGGAA-CCATACGATTCCACTTGTT--TACTGATAAAGCCATC----AATCGCTTATCAACGCATCCG------------ACCCCCT---AGTGGA----------------------ACTCCTAACCC-CG------------------ACGATAAG------
dm3 chr3R:6526363-6526606 + GATAAAGCCCGGAGCAGTGGTCATCGATTGCGGCATCAATGTGAAGCCAGGTGAGTGAT---GGTA--------ATCCCTTATC----AGT------------------------------TCAGTTGACTGGCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCAGTGGAAATCCAATAGATAA---------------------------------------------------------------------TTTAAAGACTTGCTTTAACAA------ATTCCCTA-ATCT------------------------GTGGAA-ACATACGTTTCCACTTGTT--TACTGATTACGCCGTC----AATCGCTTATCAACGCATTCG------------ACCCCCT---AGTGGA----------------------ACTCCTAACCC-CG------------------ACGATAAG------
droEre2 scaffold_4770:15080134-15080413 - GATAAAGCCCGGAGCCGTGGTCATTGATTGCGGCATCAACGTAAAGCCAGGTGAGTTGT---GGTA--------ATCCCCTATC----TGTATCTAATGATATCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACT-AAGATTTT----------------------------ACGCCATATTCCGCTGAAAAAACAATGGGTAGATAATTTTCCATCTCTCAGATACAATGA-------------------------------------------------AATG----------------------------------AA--CATTAACGTTATTTTTGACA-CCAAACGTTTCCACTTGAT--AACTGATTAC-CCATC----AATCGCTTATCAACGACTTCG------------ACCCCCT---AGTGGA----------------------ACTCCTAACCC-CG------------------ACGATAAG------
droYak3 3R:10564027-10564269 + GATAAAACCCGGTGCTGTGGTCATTGATTGCGGCATCAATGTAAAGCCAGGTAAGTGGT---GGTAGTACTGATAGT---------------------------------------------------ACTGATAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCCCAGTGAAAATCCACTGGGTAAAGAATTTTCCATCT-TCAGA-------------------------------------------------CTTAAAGACTTGCTT------------------TA-ATCT------------------------TTGAAA-GCAAATGTTTCCACTTGAT--TACTGCTTAC-CCATC----AATCACTTATCAACGATTTCG------------ACCCCCT---GGTGGA----------------------ACTCCTAACCC-CG------------------ACGATAAG------
droEug1 scf7180000409797:128207-128479 + GATAAAGCCTGGAGCCGTGGTCATCGATTGCGGAATCAATGTGAAGCCAGGTAAGTCAC---CTC-------------------------------CCGGTCACTTTTCTTTAAACTTAATTAGCTTT-CTAGCAT-------------------------------------------ATTAAAAGAAAGCATAATCTACCGATTTAGTAGGCTTTT----------AT----------------------------------------------------------------ATAGATA-ATAT-GA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATATTTTTCC--------TATCTCAAAAGAG-------------------CAAACCAAATGTTTCCACTTGTT--TACTGATTTC-CCCTC----AATCGCTTATCAACGGAATCG------------ACCCCCT---AGTGGA----------------------ACTCCTAACCCTCG------------------GAGATAAG------
droBia1 scf7180000302402:8650692-8650993 + GATAAAGCCAGGAGCCGTCGTCATCGATTGCGGCATCAATGTAAAGCCAGGTGAGTCGT---GGTA--------ATCTTTTTT---------------------------------AAA------------------------------------------------------------------------------------------AATAGGTTTTAA--CCTTTTGAATC---------------------------------------------------------------------------GATTTATAAGTATCCGCTTCAAATTG----TTGTTTT---------------------------------------------TAAGATGGG----------------------------------------------CTGAGAGGAATTTATAATTTATTGGATTAAGAGACTTGTCTTCATATTTTC------CCTA-ATCTAAAAAACG-------------------CATTCTAAAAGTTTCCACTTGTT--TACCGATTTT-CCCTC----AATCGCTTATCAACACAATT-----------TGACCCCCT---GGTGGG----------------------TCTCCCAACCCCCG------------------GAGATAAG------
droTak1 scf7180000415653:489527-489733 - GATAAAGCCCGGTGCGGTGGTCATCGATTGCGGCATCAATGTGAAGCCAGGTGAGTGGT---CTTT--------TGTCTTTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATATACATATTTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATATTTTT------CCTT-ATCTTCCAAACA-------------------CATTTCAAACATTTCCACTTGTT--CACTGACTTT-CCCTC----AATCGCTTATCAACCTAGTTG------------ACCCCCT---GGTGGG----------------------TTTCCTATCCCCCG----------------G-GAGATAAG------
droEle1 scf7180000486474:773447-773504 + GATAAAACCGGGAGCTGTGGTCATCGATTGCGGCATCAATGTGAAGCCAGGTGAGTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000780140:62424-62547 + TTTGAAAACCTATATTATTACC---------------------------------------------------------TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCT------------------------ATTCAT-GGAAATATTTCCACTTTCT--CACTGATTTC-CTCTC----CATCGCTTATCAACACATTCG------------ACCCCCT---AGTGGG----------------------ACTACTAACCCCCG------------------GAGATAAG------
droFic1 scf7180000454104:173272-173588 + GATAAAGCCGGGTGCTGTGGTCATCGATTGCGGCATTAATGTGAAGCCAGGTTAGTACA---GACA--------ATCTATAATC------------------------------------------------------T------------------------------------------------------------AGAGATTTGAGAAGATATTTCTAACTTTTATGA---GAGATACAGAATTTATTGGTTATCTATCTATTTATGTTCACTAAGATATAGTTTTGTATTC--AAACA-------------------TATTTTAAAATTAAAGAATTT---------------------------------------------------------------------------------------------------------------------------------------------TCTTCACATTTCC------CACA-ATTATAATAACA-------------------CAGCCCAAACTTTTCCACTTGTT--TACTGATTAC-CACTC----AGTCGCTTATCAACGCATTCG------------ACCCCCT---GTTGGG----------------------AATCCTAACCTCTG------------------AAGATAAG------
droKik1 scf7180000302475:1764157-1764363 + GATCAAGCCCGGAGCCGTGGTCATTGATTGTGGCATCAATGTGAAGCCAGGTAAGGT--------T--------TTTCTTCCT---------------------------------CTAGTTAGGTTTTTCGGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAAAGACTTTCTCTTGAAT-----------------TT------------------------TT-----CAAAATATTTCCATTTGTTTTTACGG-TTTT-CCGTC----TGTCGCTTATCAATGCGCTCG------------ACCTCCCCGGGGTGGA----------------------ACTCCTAACCCCCT---------------GCTGAGATAAG------
droAna3 scaffold_13340:1174243-1174586 + GATTAAGCCCGGAGCTGTAGTAATAGATTGTGGCATCAATGTGAAGCTAGGTAAGAGCAAAAGG-T--------AGCCCCCATGAA--CCC-------------------------CCAGTTCA----TCTGATCATCCGAGAGACTCTAATCAGTTTCATTATGGAATTTTCCAGTGCCTGA-----------------------------------------------------------------------------------------------------AAATGTGAATGA--AAACA-------------------TATTTTAAAATTGAAAATT---------------------------CCATATCTA--TAGC--------------------------------T--------GTATTGAC----TGCT-TGAC-TGCC-TGGGATATT--------CGATCC---------------------------------AT--AACGAATTACATTTTAAAAT--CT-ATCG----GCAGCCATGCCACTTGTT--TACCAAT----CGCTC----TATTCCTTATCATTTGGGATG------------ACCTCTC---GGGAGG----------------------CTTGCCAGCCC-TC--------------TTC-CAGATAAG------
droBip1 scf7180000396395:642374-642640 - GATTAAGCCCGGAGCTGTAGTAATTGATTGTGGCATCAATGTAAAGCCAGGTAAGTGCCAAAGA----------AGCCTCCATT----TGT-------------------------CTAGTCCA----TCTGACCATCCGAGAAACTTTAATCACTTCCATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATCTAAAGCAGTTCAATGGAAGCTGCAGTTACTAGGTCCATAAC-----------------------------ATTG------------------------GTGCATCT-CAGTCATACCACTTGTT--TACCGAT----CCCTC----TATTCCTTATCATTTGGCATG------------ACCTCTT---GAGAGG----------------------CTTGCCAGCCC-TA--------------TTC-CAGATAAG------
dp5 2:29431770-29432099 - GATAAAGCCCGGTGCGGTGGTCATCGATTGTGGCATTAATGTGAAGCCAGGTGAGGAAG---GACA--------CCTTTTTTT-------------------------------------------------------TGAGGGGCT------------------------------------------------------------ATGATGGGTTGTCT--CTTCTGGGATA---------------------------------------------------------------------------GATAT-------TCCTCTTTAAATTTATGAATGTTTTTGATACATTTTCCTATAAGGATGGATCTCTA--TACC--------------------------------CTCCTAAACATAATGATTCAATCTA-TGCCTTCCCTTGGAATTTTCC---------------------------------------------TT--TACCAAATG-------------------CATTTCTATCGTTGCCACTTGTT--GATCAGTTTC-CCCTG----CATACCTTATCAGTGCGAATG------------ACCCCGC---AGTGAC---------CCGCCCTGGG---GGTC--CACAT-CG----------------A-CAGATAAG------
droPer2 scaffold_6:4802328-4802679 - GATAAAGCCCGGTGCGGTGGTCATCGATTGTGGCATTAATGTGAAGCCAGGTGAGGAAG---GACA--------CCTTTTTT---TT---------------------------------------------------TGAGGGGCT------------------------------------------------------------ATGATGGGTTGTCT--CTTCTGGGATAAGTGT------------------------------------------------TT------TATATACCTCATTAGATAT-------TCCTCTTTAAATTTATGAATGTTTTTGATACATTTTCCTATAAGGATGGATCTCTA--TACC--------------------------------CTCCTAAACATAATGATTCAATCTA-TGCCTTCCCTTGGAATTTTCC---------------------------------------------TT--TACCAAATG-------------------CATTTCTATCGTTGCCACTTGTT--GATCAGTTTC-CCCTG----TATACCTTATCAGTGCGAATG------------ACCCCGC---AGTGAC---------CCGCCCTGGG---GGTC--CACAT-CG----------------A-CAGATAAG------
droWil2 scf2_1100000004902:4432148-4432384 + GATCAAACCCGGCGCTGTGGTCATCGATTGTGGCATCAATGTGAAGCCAGGTGGGTAAA---TCAA--------AGTCCACCTCAGTTGGTACTTGTTGGTATCTTTTTTT----------------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAAATTTTCCATCC------------------------------------------------------------------------------------------------------------------------------CAACATAATCTCACTTGTT--TACTATTTTC-A--TCGACGTTTCGCTTATCACTAGTTTTGACCCACAATTCGACCCCAT---GCCGAG------------------AGGCACTCCTC------TAGACTCTAGTCATCTTCTGCGATAAG------
droVir3 scaffold_13047:7191964-7192123 - GATAAAGCCAGGCGCCGTGGTCATCGACTGTGGCATTAATGTCAAGCCAGGTGAGTGGG---CATC--------GCTACAGATGAGT---------------------------------------TGCTTTCCGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCAAACCCAGTTGTT--TAC-----------------CATTGCTTATCACAGCGCCTG------------ACCCCT-----GTTGA----------------------GCCCC----------------------------TGATAAGCATGGA
droMoj3 scaffold_6540:3107744-3107798 - GATAAAGCCCGGCGCAGTGGTCATCGATTGTGGCATCAATGTGAAGCCAGGTGAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14830:3056079-3056136 - GATAAAGCCCGGCGCTGTTGTCATCGATTGTGGCATGAATTTTAAGCCAGGTAAGTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GATAAAGCCCGGAGCAGTGGTCATCGATTGCGGCATCAATGTGAAGCCAGGTGAGTGAT---GGTT--------ATCCCTTATCAGT---------------------------------------TGACTGGCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCAGTGAATATCCAATGGATAA---------------------------------------------------------------------TCTAAAGACTTGCTTTAACAT------ATTTTCTA-ATCT------------------------GTGGAA-CCAAACGTTTCCACTTGTT--TACTGATAAAGCCATC----AATCGCTTATCAACGCATCCG------------ACCCCCT---AGTGGAATAAGAAACCG-----------ACCC-CGACCCCCG------------------ACGATAAG------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...............AGTGGTCATCGATTGCGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200200000000000000
..................GGTCATCGATTGCGGCATCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200200000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------ATTTTCTA-ATCT------------------------GTGGAA-CC............................................................................................................................................................2111.00100100000000000000
.............GCAGTGGTCATCGATTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................ATGGATAA---------------------------------------------------------------------TCTAAAGACTTGC........................................................................................................................................................................................................................2111.00100100000000000000
...........GAGCAGTGGTCATCGATTGCGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAT------ATTTTCTA-ATCT------------------------GTGGAA-CC............................................................................................................................................................2311.00100100000000000000
.......................TCGATTGCGGCATCAATGTGAAGCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
........CCGGAGCAGTGGTCATCGATTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000001000
.....................CATCGATTGCGGCATCAATGTGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000010000000
.....................CATCGATTGCGGCATCAATGTGAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000000001000
..................................ATCAATGTGAAGCCAGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1880.13101000000000000000
droSec2
GATAAAGCCCGGAGCAGTGGTCATCGATTGCGGCATCAATGTGAAGCCAGGTGAGTGAT---AGTT--------ATCCCTTATCAGT---------------------------------------TGACTGGCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCAGTGAAAATCCAATGGATAA---------------------------------------------------------------------TCTAAAGACTTGCTTGAACAT------ATTTTATA-ATCT------------------------GTGGAA-CCATACGATTCCACTTGTT--TACTGATAAAGCCATC----AATCGCTTATCAACGCATCCG------------ACCCCCT---AGTGGA----------------------ACTCCTAACCC-CG------------------ACGATAAG------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
GATAAAGCCCGGAGCAGTGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
...........................TTGCGGCATCAATGTGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.....AGCCCGGAGCAGTGGTCATCGATTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
...............AGTGGTCATCGATTGCGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
dm3
GATAAAGCCCGGAGCAGTGGTCATCGATTGCGGCATCAATGTGAAGCCAGGTGAGTGAT---GGTA--------ATCCCTTATC----AGT------------------------------TCAGTTGACTGGCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCAGTGGAAATCCAATAGATAA---------------------------------------------------------------------TTTAAAGACTTGCTTTAACAA------ATTCCCTA-ATCT------------------------GTGGAA-ACATACGTTTCCACTTGTT--TACTGATTACGCCGTC----AATCGCTTATCAACGCATTCG------------ACCCCCT---AGTGGA----------------------ACTCCTAACCC-CG------------------ACGATAAG------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................GTGGTCATCGATTGCGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GCAGTGGTCATCGATTGCGGCAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GCAGTGGTCATCGATTGCGGCATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATCGATTGCGGCATCAATGTGAAGCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTCG------------ACCCCCT---AGTGGA----------------------ACTC..........................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TCATCGATTGCGGCATCAATGTGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CCCGGAGCAGTGGTCATCGATTGCGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................GTGGTCATCGATTGCGGCATCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
......GCCCGGAGCAGTGGTCATCGATTGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................ATCGATTGCGGCATCAATGTGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AAAGCCCGGAGCAGTGGTCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GTGGTCATCGATTGCGGCATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGATTACGCCGTC----AAT..................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
................................GCATCAATGTGAAGCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCTTATCAACGCATTCG------------ACCCCCT---A.........................................................................2711.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATCGATTGCGGCATCAATGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................ATCGATTGCGGCATCAATGTGAAGCCAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AGCCCGGAGCAGTGGTCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...................................................................................C----AGT------------------------------TCAGTTGACTGGCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCCA.............................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AAGCCCGGAGCAGTGGTCATCGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AAAGCCCGGAGCAGTGGTCATCGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
......GCCCGGAGCAGTGGTCATCGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....AAGCCCGGAGCAGTGGTCATCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.....AGCCCGGAGCAGTGGTCATCGATTGCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
............AGCAGTGGTCATCGATTGCGGCATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............AGTGGTCATCGATTGCGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................GAAGCCAGGTGAGTGAT---GGTA--------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AGCAGTGGTCATCGATTGCGGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................GATTGCGGCATCAATGTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....AGCCCGGAGCAGTGGTCATCGATTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................GTGGTCATCGATTGCGGCATCAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CATCGATTGCGGCATCAATGTGAAGCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CATCGATTGCGGCATCAATGTGAAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.ATAAAGCCCGGAGCAGTGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000
......GCCCGGAGCAGTGGTCATCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................ATCGATTGCGGCATCAATGTGAAGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TCGATTGCGGCATCAATGTGAAGCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CAGTGGTCATCGATTGCGGCAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TCGATTGCGGCATCAATGTGAAGCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TCGATTGCGGCATCAATGTGAAGCCAGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TCGATTGCGGCATCAATGTGAAGCCAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................TCGATTGCGGCATCAATGTGAAGCCAGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CGATTGCGGCATCAATGTGAAGCCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.ATAAAGCCCGGAGCAGTGGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TAAAGCCCGGAGCAGTGGTCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..............CAGTGGTCATCGATTGCGGCATCAATGATC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TAAAGCCCGGAGCAGTGGTCATCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GATTGCGGCATCAATGTGAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CGATTGCGGCATCAATGTGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
...................GTCATCGATTGCGGCATCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
GATAAAGCCCGGAGCAGTGGTCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................AGTGGAAATCCAATAGGG............................................................................................................................................................................................................................................................................................................18100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GATAAAGCCCGGAGCCGTGGTCATTGATTGCGGCATCAACGTAAAGCCAGGTGAGTTGT---GGTA--------ATCCCCTATC----TGTATCTAATGATATCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGATACT-AAGATTTT----------------------------ACGCCATATTCCGCTGAAAAAACAATGGGTAGATAATTTTCCATCTCTCAGATACAATGA-------------------------------------------------AATG----------------------------------AA--CATTAACGTTATTTTTGACA-CCAAACGTTTCCACTTGAT--AACTGATTAC-CCATC----AATCGCTTATCAACGACTTCG------------ACCCCCT---AGTGGA----------------------ACTCCTAACCC-CG------------------ACGATAAG------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............CGTGGTCATTGATTGCGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
.....................CATTGATTGCGGCATCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
...................GTCATTGATTGCGGCATCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCG------------ACCCCCT---AGTGGA----------------------ACTCC.........................................2211.0011000000
....................TCATTGATTGCGGCATCAACG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
droYak3
GATAAAACCCGGTGCTGTGGTCATTGATTGCGGCATCAATGTAAAGCCAGGTAAGTGGT---GGTAGTACTGATAGT---------------------------------------------------ACTGATAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCCCAGTGAAAATCCACTGGGTAAAGAATTTTCCATCT-TCAGA-------------------------------------------------CTTAAAGACTTGCTT------------------TA-ATCT------------------------TTGAAA-GCAAATGTTTCCACTTGAT--TACTGCTTAC-CCATC----AATCACTTATCAACGATTTCG------------ACCCCCT---GGTGGA----------------------ACTCCTAACCC-CG------------------ACGATAAG------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................GT---GGTAGTACTGATAGT---------------------------------------------------ACTGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCG------------ACCCCCT---GGTGGA----------------------ACTCC.........................................2111.00100100000000
droEug1
GATAAAGCCTGGAGCCGTGGTCATCGATTGCGGAATCAATGTGAAGCCAGGTAAGTCAC---CTC-------------------------------CCGGTCACTTTTCTTTAAACTTAATTAGCTTT-CTAGCAT-------------------------------------------ATTAAAAGAAAGCATAATCTACCGATTTAGTAGGCTTTT----------AT----------------------------------------------------------------ATAGATA-ATAT-GA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATATTTTTCC--------TATCTCAAAAGAG-------------------CAAACCAAATGTTTCCACTTGTT--TACTGATTTC-CCCTC----AATCGCTTATCAACGGAATCG------------ACCCCCT---AGTGGA----------------------ACTCCTAACCCTCG------------------GAGATAAG------SizeHit CountTotal NormTotal
No Reads
droBia1
GATAAAGCCAGGAGCCGTCGTCATCGATTGCGGCATCAATGTAAAGCCAGGTGAGTCGT---GGTA--------ATCTTTTTT---------------------------------AAA------------------------------------------------------------------------------------------AATAGGTTTTAA--CCTTTTGAATC---------------------------------------------------------------------------GATTTATAAGTATCCGCTTCAAATTG----TTGTTTT---------------------------------------------TAAGATGGG----------------------------------------------CTGAGAGGAATTTATAATTTATTGGATTAAGAGACTTGTCTTCATATTTTC------CCTA-ATCTAAAAAACG-------------------CATTCTAAAAGTTTCCACTTGTT--TACCGATTTT-CCCTC----AATCGCTTATCAACACAATT-----------TGACCCCCT---GGTGGG----------------------TCTCCCAACCCCCG------------------GAGATAAG------SizeHit CountTotal NormTotal
No Reads
droTak1
GATAAAGCCCGGTGCGGTGGTCATCGATTGCGGCATCAATGTGAAGCCAGGTGAGTGGT---CTTT--------TGTCTTTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATATACATATTTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATATTTTT------CCTT-ATCTTCCAAACA-------------------CATTTCAAACATTTCCACTTGTT--CACTGACTTT-CCCTC----AATCGCTTATCAACCTAGTTG------------ACCCCCT---GGTGGG----------------------TTTCCTATCCCCCG----------------G-GAGATAAG------SizeHit CountTotal NormTotal
No Reads
droEle1
GATAAAACCGGGAGCTGTGGTCATCGATTGCGGCATCAATGTGAAGCCAGGTGAGTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TTTGAAAACCTATATTATTACC---------------------------------------------------------TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCT------------------------ATTCAT-GGAAATATTTCCACTTTCT--CACTGATTTC-CTCTC----CATCGCTTATCAACACATTCG------------ACCCCCT---AGTGGG----------------------ACTACTAACCCCCG------------------GAGATAAG------SizeHit CountTotal NormTotal
No Reads
droFic1
GATAAAGCCGGGTGCTGTGGTCATCGATTGCGGCATTAATGTGAAGCCAGGTTAGTACA---GACA--------ATCTATAATC------------------------------------------------------T------------------------------------------------------------AGAGATTTGAGAAGATATTTCTAACTTTTATGA---GAGATACAGAATTTATTGGTTATCTATCTATTTATGTTCACTAAGATATAGTTTTGTATTC--AAACA-------------------TATTTTAAAATTAAAGAATTT---------------------------------------------------------------------------------------------------------------------------------------------TCTTCACATTTCC------CACA-ATTATAATAACA-------------------CAGCCCAAACTTTTCCACTTGTT--TACTGATTAC-CACTC----AGTCGCTTATCAACGCATTCG------------ACCCCCT---GTTGGG----------------------AATCCTAACCTCTG------------------AAGATAAG------SizeHit CountTotal NormTotal
No Reads
droKik1
GATCAAGCCCGGAGCCGTGGTCATTGATTGTGGCATCAATGTGAAGCCAGGTAAGGT--------T--------TTTCTTCCT---------------------------------CTAGTTAGGTTTTTCGGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAAAGACTTTCTCTTGAAT-----------------TT------------------------TT-----CAAAATATTTCCATTTGTTTTTACGG-TTTT-CCGTC----TGTCGCTTATCAATGCGCTCG------------ACCTCCCCGGGGTGGA----------------------ACTCCTAACCCCCT---------------GCTGAGATAAG------SizeHit CountTotal NormTotal
No Reads
droAna3
GATTAAGCCCGGAGCTGTAGTAATAGATTGTGGCATCAATGTGAAGCTAGGTAAGAGCAAAAGG-T--------AGCCCCCATGAA--CCC-------------------------CCAGTTCA----TCTGATCATCCGAGAGACTCTAATCAGTTTCATTATGGAATTTTCCAGTGCCTGA-----------------------------------------------------------------------------------------------------AAATGTGAATGA--AAACA-------------------TATTTTAAAATTGAAAATT---------------------------CCATATCTA--TAGC--------------------------------T--------GTATTGAC----TGCT-TGAC-TGCC-TGGGATATT--------CGATCC---------------------------------AT--AACGAATTACATTTTAAAAT--CT-ATCG----GCAGCCATGCCACTTGTT--TACCAAT----CGCTC----TATTCCTTATCATTTGGGATG------------ACCTCTC---GGGAGG----------------------CTTGCCAGCCC-TC--------------TTC-CAGATAAG------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......GCCCGGAGCTGTAGTAATA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003000003
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGAC----TGCT-TGAC-TGCC-TGGGAT....................................................................................................................................................................................................................................................2511.001010000
.ATTAAGCCCGGAGCTGTAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
droBip1
GATTAAGCCCGGAGCTGTAGTAATTGATTGTGGCATCAATGTAAAGCCAGGTAAGTGCCAAAGA----------AGCCTCCATT----TGT-------------------------CTAGTCCA----TCTGACCATCCGAGAAACTTTAATCACTTCCATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAATCTAAAGCAGTTCAATGGAAGCTGCAGTTACTAGGTCCATAAC-----------------------------ATTG------------------------GTGCATCT-CAGTCATACCACTTGTT--TACCGAT----CCCTC----TATTCCTTATCATTTGGCATG------------ACCTCTT---GAGAGG----------------------CTTGCCAGCCC-TA--------------TTC-CAGATAAG------SizeHit CountTotal NormTotal
No Reads
dp5
GATAAAGCCCGGTGCGGTGGTCATCGATTGTGGCATTAATGTGAAGCCAGGTGAGGAAG---GACA--------CCTTTTTTT-------------------------------------------------------TGAGGGGCT------------------------------------------------------------ATGATGGGTTGTCT--CTTCTGGGATA---------------------------------------------------------------------------GATAT-------TCCTCTTTAAATTTATGAATGTTTTTGATACATTTTCCTATAAGGATGGATCTCTA--TACC--------------------------------CTCCTAAACATAATGATTCAATCTA-TGCCTTCCCTTGGAATTTTCC---------------------------------------------TT--TACCAAATG-------------------CATTTCTATCGTTGCCACTTGTT--GATCAGTTTC-CCCTG----CATACCTTATCAGTGCGAATG------------ACCCCGC---AGTGAC---------CCGCCCTGGG---GGTC--CACAT-CG----------------A-CAGATAAG------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................GGGCT------------------------------------------------------------ATGATGGGTTGTCG--A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTT--GATCAGTTTC-CCCTG----C....................................................................................................................1911.0010100000000
droPer2
GATAAAGCCCGGTGCGGTGGTCATCGATTGTGGCATTAATGTGAAGCCAGGTGAGGAAG---GACA--------CCTTTTTT---TT---------------------------------------------------TGAGGGGCT------------------------------------------------------------ATGATGGGTTGTCT--CTTCTGGGATAAGTGT------------------------------------------------TT------TATATACCTCATTAGATAT-------TCCTCTTTAAATTTATGAATGTTTTTGATACATTTTCCTATAAGGATGGATCTCTA--TACC--------------------------------CTCCTAAACATAATGATTCAATCTA-TGCCTTCCCTTGGAATTTTCC---------------------------------------------TT--TACCAAATG-------------------CATTTCTATCGTTGCCACTTGTT--GATCAGTTTC-CCCTG----TATACCTTATCAGTGCGAATG------------ACCCCGC---AGTGAC---------CCGCCCTGGG---GGTC--CACAT-CG----------------A-CAGATAAG------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................CATCGATTGTGGCATTAATGTGAAGCCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.002200000
.....................CATCGATTGTGGCATTAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.............GCGGTGGTCATCGATTGTGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droWil2
GATCAAACCCGGCGCTGTGGTCATCGATTGTGGCATCAATGTGAAGCCAGGTGGGTAAA---TCAA--------AGTCCACCTCAGTTGGTACTTGTTGGTATCTTTTTTT----------------------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAAATTTTCCATCC------------------------------------------------------------------------------------------------------------------------------CAACATAATCTCACTTGTT--TACTATTTTC-A--TCGACGTTTCGCTTATCACTAGTTTTGACCCACAATTCGACCCCAT---GCCGAG------------------AGGCACTCCTC------TAGACTCTAGTCATCTTCTGCGATAAG------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......ACCCGGCGCTGTGGTCATCGATTGTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00110000
..................GGTCATCGATTGTGGCATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
.....AACCCGGCGCTGTGGTCATCGATTGTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00110000
................GTGGTCATCGATTGTGGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001
GATCAAACCCGGCGCTGTGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.....................CATCGATTGTGGCATCAATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
droVir3
GATAAAGCCAGGCGCCGTGGTCATCGACTGTGGCATTAATGTCAAGCCAGGTGAGTGGG---CATC--------GCTACAGATGAGT---------------------------------------TGCTTTCCGC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCC------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCAAACCCAGTTGTT--TAC-----------------CATTGCTTATCACAGCGCCTG------------ACCCCT-----GTTGA----------------------GCCCC----------------------------TGATAAGCATGGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........GGCGCCGTGGTCATCGACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003001000000000000000000000000001010000000000000000000000000000000
..........GGCGCCGTGGTCATCGACTGTGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002000200000000000000000000000000000000000000000000000000000000000
....................TCATCGACTGTGGCATT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001000000000000000000000000000000000000000000000000000000010000000
..TAAAGCCAGGCGCCGTGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
...AAAGCCAGGCGCCGTGGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000100000000000000000000000000000000000000000000000000000
......................ATCGACTGTGGCATTAATGTCAAGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000000000000000000000000000000000000000000000000000000000000
.......................TCGACTGTGGCATTAATGTCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..TAAAGCCAGGCGCCGTGGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...............CGTGGTCATCGACTGTGGCATTAATGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000001000000000000000000000000000000000
........................CGACTGTGGCATTAATGTCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
...............CGTGGTCATCGACTGTGGCATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000000000000000000000000000000000000000000000000000000000000
..TAAAGCCAGGCGCCGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000010
.ATAAAGCCAGGCGCCGTGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000100
.............................GTGGCATTAATGTCAAGCCAGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
GATAAAGCCCGGCGCAGTGGTCATCGATTGTGGCATCAATGTGAAGCCAGGTGAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............CGCAGTGGTCATCGATTGTGGCATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
droGri2
GATAAAGCCCGGCGCTGTTGTCATCGATTGTGGCATGAATTTTAAGCCAGGTAAGTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...AAAGCCCGGCGCTGTTGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00220
................GTTGTCATCGATTGTGGCATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
....AAGCCCGGCGCTGTTGTCATCGATTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101
GATAAAGCCCGGCGCTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
....AAGCCCGGCGCTGTTGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
GATAAAGCCCGGCGCTGTTGTC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110

Generated: 05/18/2015 at 05:36 PM