dsi_5663

exon [3r_20959604_20960132_-]; CDS [3r_20959604_20960132_-]; exon [3r_20959344_20959542_-]; CDS [3r_20959344_20959542_-]; intron [3r_20959543_20959603_-]

##################################################-------------------------------------------------------------################################################## AGTTCGCCGACGATGTGGATGCTGTGGCCAGTGCGCTGGGACTGAAGAAGGTTTGTTATAGACAATACAAGAGTAGTGTTGCGTTAGTATTGACTGTTGTGCCATTTATAGATTGGTTGGATTTTCACTGATCTCATCACGGAGGATGCGAGTATCGGCAC ************************************************.....(((((((...(((((.(((.....(((....)))...))).)))))...)))))))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M024 male body	SRR902009 testis	SRR553487 NRT_0-2 hours eggs	SRR618934 dsim w501 ovaries	M023 head	M053 female body	O001 Testis	SRR553486 Makindu_3 day-old ovaries	SRR553485 Chicharo_3 day-old ovaries	SRR553488 RT_0-2 hours eggs
...TCGCCGACGATGTGGATGCTGTGGC.....................................................................................................................................	25	0	1	3.00	3	0	3	0	0	0	0	0	0	0	0
.GTTCGCCGACGATGTGGATG............................................................................................................................................	20	0	1	2.00	2	2	0	0	0	0	0	0	0	0	0
.............................AGTGCGCTGGGACTGAAGAA................................................................................................................	20	0	1	2.00	2	2	0	0	0	0	0	0	0	0	0
.....................................GGGACTGAAGAAGATTGGT.........................................................................................................	19	2	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................GTGCGCTGGGACTGAAGAAG...............................................................................................................	20	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0
...............................TGCGCTGGGACTGAAGAAGATTGGTT........................................................................................................	26	2	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................CCCGGAGGATGAGAATATCGGC..	22	3	1	1.00	1	0	0	0	1	0	0	0	0	0	0
.......................................................................................................................................ATCACGGAGGATGCGAGTATC.....	21	0	1	1.00	1	0	0	0	0	0	1	0	0	0	0
...............................TGCGCTGGGACCGAAGAAGATTGGT.........................................................................................................	25	3	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................GTGCGCTGGGACTGAAGAA................................................................................................................	19	0	1	1.00	1	0	0	0	0	1	0	0	0	0	0
...........................................................................................................GAAGATTGGTTGGATTTTCACT................................	22	2	1	1.00	1	1	0	0	0	0	0	0	0	0	0
..................ATGCTGTGGCCAGTGCGCTGGGACT......................................................................................................................	25	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0
...............................................................................................................ATTGGTTGGATTTTCACTGATCT...........................	23	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0
..............................................................................................................GATTGGTTGGATTTTCACTGATC............................	23	0	1	1.00	1	1	0	0	0	0	0	0	0	0	0
......................................................................................................................................CATCACGGAGGATGCGAGTATCG....	23	0	1	1.00	1	0	0	0	0	0	0	1	0	0	0
....................................................................................................................TTGGATTTTCACTGATCTCATCACGGAGGA...............	30	0	1	1.00	1	0	0	1	0	0	0	0	0	0	0
...........................................................................................................GAAGATTGGTTGGATTTTCA..................................	20	2	2	0.50	1	1	0	0	0	0	0	0	0	0	0
................................GCGCTGGGACTGAAGAAGA..............................................................................................................	19	1	2	0.50	1	0	0	0	0	0	0	0	1	0	0
...................TGCAGTGGACAGTGCTCTGGGA........................................................................................................................	22	3	2	0.50	1	0	0	1	0	0	0	0	0	0	0
..............................................................................................................GATTGGTTGGATTTTCA..................................	17	0	2	0.50	1	0	0	0	0	0	0	0	0	1	0
....................................................................AAGAGTCGTGTTGCG..............................................................................	15	1	4	0.25	1	0	0	0	0	0	0	0	1	0	0
.................................CGCTGGGACTGAGGA.................................................................................................................	15	1	11	0.09	1	0	0	0	0	0	0	0	0	0	1
........GACGAGGTGGGTCCTGTGGC.....................................................................................................................................	20	3	12	0.08	1	0	0	0	1	0	0	0	0	0	0
........GACGAGGTGGGTACTGTGGC.....................................................................................................................................	20	3	14	0.07	1	0	0	0	1	0	0	0	0	0	0
....................................................................................................................TTGGATTTTCAATGAT.............................	16	1	17	0.06	1	0	0	0	0	0	0	0	0	1	0
.....................................................................................................................TGGATTTTTACTGAT.............................	15	1	19	0.05	1	0	0	0	0	0	0	0	0	0	1
..................................GCTGGGACTGAGGAA................................................................................................................	15	1	20	0.05	1	0	0	0	0	0	0	0	1	0	0
...................................CTGGGGCTGTAGAAGGT.............................................................................................................	17	2	20	0.05	1	0	0	0	0	0	0	0	1	0	0

TCAAGCGGCTGCTACACCTACGACACCGGTCACGCGACCCTGACTTCTTCCAAACAATATCTGTTATGTTCTCATCACAACGCAATCATAACTGACAACACGGTAAATATCTAACCAACCTAAAAGTGACTAGAGTAGTGCCTCCTACGCTCATAGCCGTG ************************************************.....(((((((...(((((.(((.....(((....)))...))).)))))...)))))))************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	SRR902009 testis	SRR553488 RT_0-2 hours eggs	M024 male body	M023 head
.......................CACCGGTCATGCGACGATGA......................................................................................................................	20	3	7	0.14	1	1	0	0	0
..............................................................................................................CGAACCAACTTAAAAGTG.................................	18	2	9	0.11	1	0	0	1	0
...................................................AATCAATATATGTCATGTTC..........................................................................................	20	3	20	0.10	2	0	0	0	2
........................................TGACTTCTTCTAAACCAT.......................................................................................................	18	2	14	0.07	1	0	1	0	0
.....................................CCCTGACCTCTTCCA.............................................................................................................	15	1	20	0.05	1	0	1	0	0

Species	Coordinate	ID	Alignment
droSim2	3r:20959493-20959653 -	dsi_5663	AGTTCGCCGACGATGTGGATGCTGTGGCCAGTGCGCTGGGACTGAAGAAGGTTTGTTAT--A--G----------------ACAAT-ACA----------AGAG----TA-GTGTTGCGTTAGTA---T------------------------TGACTGTTGTGCCATTT-ATAGATTGGTTGGATTTTCACTGATCTCATCACGGAGGATGCGAGTATCGGCAC
droSec2	scaffold_13:234921-235081 -		AGTTCGCCGACGATGTGGATGCTGTGGCCAGTGCGCTGGGACTGAAGAAGGTTAGTTAT--A--G----------------ACAGT-ACA----------AGAG----TA-GTGTTGCATTAGTA---T------------------------TGACTGCTGTGCCATTT-ATAGATTGGTTGGATTTTCACTGATCTCATCACGGAGGATGCGAGTATCGGCAC
dm3	chr3R:21447974-21448133 -		AGTTCGCCGACGATGTGGATGCCGTAGCCAGTGCGCTGGGACTGAAGAAGGTTAGTTAGTTATAGACA--------------------G-------------TA---GC-TATGTAGCATTAGTA---T------------------------TGACTTTTGTGACATTT-ATAGATTGGTTGGATTTTCACTGATCTCATCACGGACGATGCGAGTATCGGCAC
droEre2	scaffold_4820:6593828-6593986 +		AGTTCGCTGACGATGTGGATGCCGTTGCCAGTGCGCTAGGACTGAAAAAGGTTAGTTAT--A--A----------------CTACC-ACA----------AAAG----TT-GCCTTTTTT--ATT---T------------------------TTTCATTTCTGACGTTC-TTAGATTGGTTGGATTTTCACTGATCTCATCACGGAGGATGCGAGTGTCGGCAC
droYak3	3R:25026167-25026328 +		AGTTCGCCGACGATGTGGATGCCGTGGCCAGTGCGCTAGGACTGAAGAAGGTTAGTTAA--A--A----------------CTATT-ATG----------CGAG----TT-ATGTTGTTTGATTG---T------------------------TGACATTTGTTTGTTTCATTAGATTGGTTGGATTTTCACTGATCTCATCACGGAGGATGCAAGCATTGGCAC
droEug1	scf7180000409682:1183044-1183205 +		AGGGAGCAGATGATGTGGATGCGGTGGCCACTGCACTTGGACTGAAGAAGGTGTGCTTT--T--A----------------CTATT-ATT----------AGAA----TCGACTTTATTTTTCTA---A------------------------TGATTTCTGTGCATATT-ACAGATTGGTTGGATTTTCACTGATCTCATCACGGAAGATGCGAGTGTCGGCAC
droBia1	scf7180000302136:2295174-2295331 -		AGGGAGCCGACGATGTGGATGCCGTGGCCACTGCGCTGGGACTGAAGAAGGTGAGCTAA--C--T-------ACCTGAAAACC----TAA----------A-AG------------ATATTGCAA---C---TTA---TAT--T---TTTATT--------------TTT-CCAGATTGGTTGGATTTTTACTGATCTCATCACGGAAGATGCGAGTATCGGCAC
droTak1	scf7180000415257:333007-333165 -		AGGGAGCCGACGAGGTGGATGCCGTGGCCAGTGCGCTGGGACTGAAGAAGGTGAGCTAC--T--T-------TTATTA----------C-------------CA---AC-TATCTAATATTACGA---C------------------------TAATATTTGTGTATTTC-CCAGATTGGTTGGATTTTCACTGATCTCATCACGGAGGATGCGAGTGTCGGCAC
droEle1	scf7180000491280:3158448-3158611 -		AGGGAGCCGATGATGTGGATGCCGTGGCCAATGCGCTGGGACTGAAGAAGGTTAGCTAT--T--A----------------CTCTTTGTTCTAGTTTCAT------------TAACCGTCTG-TTACA--AT--TTAT---------GTCAAC--------------TTT-ACAGATTGGTTGGATTTTTACTGATCTCATCACGGAGGATGCGAGCGTCGGCAC
droRho1	scf7180000779501:476227-476389 +		AGGGAGCCGATGATGTGGATGCCGTGGCTAGTGCGCTTGGACTAAAGAAGGTGAGCCTT-----A----------------CTCTTTATTGTAGACCCAT------------CA-GTAATCTCTAACG--AT--CTTT---------ATTATA--------------TTT-ACAGATTGGCTGGATTTTTACTGATCTCATCACGGAGGATGCGAGCGTCGGCAC
droFic1	scf7180000454055:1364010-1364167 -		AGGGTGCTGATGATGTGGATGCTGTGGCAACTGCGCTAGGATTGAAGAAGGTGAGCCAT--T--A----------------CCATTTGTTTTAAATTTGT---------------GAAATCTTTA------A--TAAT---------GGTAAT--------------TCC-ACAGATTGGTTGGATTTTCACTGATCTCATCACGGAGGATGCGACTGTGGGCAC
droKik1	scf7180000302639:1588387-1588545 +		AGGGAGCAGACGATGTGGATGCCGTGGCCAACGCGCTGGGATTGAAAAAGGTGGGAATA--C-----AGTGTATA---------------------------ATGCA----ATCAAATTCAAGGC---TAA-T-----T-G---TTAATTTTT--------------CAA-ACAGATTGGTTGGATATTCACTGATCTCATCACGGAGGATGCTAGTGCCGGCAC
droAna3	scaffold_13340:3704058-3704216 -		AGGGCGCCGACGAAGTGGAGGCTGTTGCTGCGGCTTTGGGACTAAAGAAGGTGAGTTGG--G--A----------------TT----TAA----------A-AGGCATT---CGTGAGTTGCTTA---TCA-C-----T-T---TCAACTTGT--------------CCC-ACAGATTGGCTGGATTTTTACTGATCTCATCACAGAGGATGCTAGTGTGGGCAC
droBip1	scf7180000396712:649471-649626 +		AGGGAGCCGACGATGTGGAGGCTGTTGCCACGGCCTTGGGGCTAAAGAAGGTAAGTTAA--G--A----------------TT----TTA----------AGAG-TT-TA-TTGCTACGT--------T---------CATCATTTAATTTTT--------------CCC-GTAGATTGGCTGGATTTTTACTGATCTCATCACAGAGGATGCTAGTGTGGGCAC
dp5	2:21196508-21196670 -		AGGGCGACGCCGAAGTCGATGCTGTAGCCAATGCGTTAGGACTGAAGAAGGTGCGCCGG--AAAGACACT-TCTTTTACA-------------------------------CTATAGGTTTACTA---CAA-TTT---T-G--T---TTTTTT--------------TTT-ATAGATTGGTTGGATATTCACTGATCTCATCACGGATGATGCAACTGCAGGAAC
droPer2	scaffold_3:3971917-3972079 -		AGGGGGACGCCGAAGTCGATGCTGTAGCCAATGCGTTAGGACTGAAGAAGGTGCGCGGG--AAAGACACT-TCTTTTACA-------------------------------CTATAGGTTTACAA---CAC-TTT---T-G--T---GTTTTT--------------TTT-ATAGATTGGTTGGATATTCACTGATCTCATCACGGATGATGCAACTGCAGGAAC
droWil2	scf2_1100000004943:14601893-14602049 +		AGGGGTCTGCCGATGTAGAAGCTGTGGCAGCTGCTTTAGGGCTGAAAAAAGTAAGATAT--A--T----------------TAAA-TTC-------------CA---TC-TGTGATACTTGCTAA---ATG-A-----T-T--T---GTATT--------------GATT-GCAGATTGGTTGGATTTTCACGGATCTAATAACGGCCGATGCCACCGTTGGCAC
droVir3	scaffold_12855:6854397-6854554 -	dvi_4225	AGGGCGCAGATGAAGTAGATGCCGTAGCCAAGGCATTAGGGCTTAAAAAGGTGTGTGCC--TGAACA------------------TTTTCCT-------------------ATTTGGATTTATTCATG--AA--TTAA---------ATTCCT--------------GTG-ACAGATTGGCTGGATCTTTACGGATCTGATTACGGAAGATGCCAGTGCGGGCAC
droMoj3	scaffold_6540:25758474-25758625 +		AGAACGCTGATGAAGTGGATGCCGTAGCCAAAGCACTAGGACTTAAAAAGGTGAGCAAT--CAATAA------------------ATTTCTA----------AG-------TT--GCAGTTT----TA--AA--TC-----------ATATT--------------ATTT-ATAGATTGGATGGATTTTCACGGATCTAATTACTGAAGATGCAAGCGCTGGCAC
droGri2	scaffold_14906:2997570-2997725 -		AGGGCGCCGACGAGGTCGATGCTGTGGCCAAAGCCTTGGGACTTAAAAAGGTGAATGTC--T------------GTTAAA------TTT-------------CA-------GTTTGAATTGAATAATG--A-------TAT--T---GTTTC--------------TTTG-ACAGATTGGTTGGATCTTTACGGATCTTATAACGGAAGATGCCAGTGCGGGCAC

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droSim2

AGTTCGCCGACGATGTGGATGCTGTGGCCAGTGCGCTGGGACTGAAGAAGGTTTGTTAT--A--G----------------ACAAT-ACA----------AGAG----TA-GTGTTGCGTTAGTA---T------------------------TGACTGTTGTGCCATTT-ATAGATTGGTTGGATTTTCACTGATCTCATCACGGAGGATGCGAGTATCGGCAC	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
...TCGCCGACGATGTGGATGCTGTGGC.....................................................................................................................................................................................................	25	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0
.GTTCGCCGACGATGTGGATG............................................................................................................................................................................................................	20	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................AGTGCGCTGGGACTGAAGAA................................................................................................................................................................................	20	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................GTGCGCTGGGACTGAAGAAG...............................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................ATCACGGAGGATGCGAGTATC.....	21	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................GTGCGCTGGGACTGAAGAA................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................ATGCTGTGGCCAGTGCGCTGGGACT......................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................ATTGGTTGGATTTTCACTGATCT...........................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................GATTGGTTGGATTTTCACTGATC............................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................CATCACGGAGGATGCGAGTATCG....	23	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................TTGGATTTTCACTGATCTCATCACGGAGGA...............	30	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
................................GCGCTGGGACTGAAGAAGA..............................................................................................................................................................................	19	2	0.50	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................GATTGGTTGGATTTTCA..................................	17	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0

droSec2

AGTTCGCCGACGATGTGGATGCTGTGGCCAGTGCGCTGGGACTGAAGAAGGTTAGTTAT--A--G----------------ACAGT-ACA----------AGAG----TA-GTGTTGCATTAGTA---T------------------------TGACTGCTGTGCCATTT-ATAGATTGGTTGGATTTTCACTGATCTCATCACGGAGGATGCGAGTATCGGCAC	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
................................................................................................................................................................................................TGATCTCATCACGGAGGATGC............	21	1	2.00	2	0	2	0	0
............ATGTGGATGCTGTGGCCAGTG................................................................................................................................................................................................	21	1	2.00	2	1	1	0	0
........GACGATGTGGATGCTGTGGCCA...................................................................................................................................................................................................	22	1	2.00	2	0	2	0	0
...................TGCTGTGGCCAGTGCGCTGGGACT......................................................................................................................................................................................	24	1	2.00	2	0	2	0	0
......CCGACGATGTGGATGCTGTG.......................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1
...................................................................................................................................................................................................TCTCATCACGGAGGATGCGAGTATC.....	25	1	1.00	1	1	0	0	0
.GTTCGCCGACGATGTGGATGCTGT........................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0
.............................................................................................................................................................................AGATTGGTTGGATTTTCAC.................................	19	1	1.00	1	0	0	0	1
......................................................................................................................................................................................................CATCACGGAGGATGCGAGTATCGGC..	25	1	1.00	1	0	1	0	0
..........................GCCAGTGCGCTGGGACTGAAG..................................................................................................................................................................................	21	1	1.00	1	1	0	0	0
..............................................................................................................................................................................GATTGGTTGGATTTTCACTGAT.............................	22	1	1.00	1	0	1	0	0
.....GCCGACGATGTGGATGCTGTGG......................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0
........................................................................................................................................................................................ATTTTCACTGATCTCATCACGG...................	22	1	1.00	1	0	1	0	0
....CGCCGACGATGTGGATGCTGTGGCC....................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0
...TCGCCGACGATGTGGATGCT..........................................................................................................................................................................................................	20	1	1.00	1	0	0	0	1
...................TGCTGTGGCCAGTGCGCTGGGA........................................................................................................................................................................................	22	1	1.00	1	0	0	0	1
.............................................................................................................................................................................................................GAGGATGCGAGTATCGGC..	18	1	1.00	1	1	0	0	0
........GACGATGTGGATGCTGTGGCC....................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0
..................ATGCTGTGGCCAGTGCGCTGGGACTG.....................................................................................................................................................................................	26	1	1.00	1	0	1	0	0
.................................................................................................................................................................................................GATCTCATCACGGAGGATGCGAGTATC.....	27	1	1.00	1	1	0	0	0
.......................GTGGCCAGTGCGCTGGGACT......................................................................................................................................................................................	20	1	1.00	1	1	0	0	0
....CGCCGACGATGTGGATGC...........................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0
....................................................................................................................................................................................................CTCATCACGGAGGATGCGAG.........	20	1	1.00	1	1	0	0	0
...........GATGTGGATGCTGTGGCCAGTGCGCT............................................................................................................................................................................................	26	1	1.00	1	0	0	0	1
.........................................................................................................................................................................................................CACGGAGGATGCGAGTATCGGCA.	23	1	1.00	1	1	0	0	0
.......................................................................................................................................................................................................ATCACGGAGGATGCGAGTATCGGC..	24	1	1.00	1	0	1	0	0
.................................................................................................................................................................................................GATCTCATCACGGAGGATGC............	20	1	1.00	1	1	0	0	0
..................ATGCTGTGGCCAGTGCGCTGGGACT......................................................................................................................................................................................	25	1	1.00	1	0	1	0	0
................................................................................................................................................................................................TGATCTCATCACGGAGGATGCGAGTATC.....	28	1	1.00	1	1	0	0	0
......................................................................................................................................................................................................CATCACGGAGGATGCGAGTATC.....	22	1	1.00	1	1	0	0	0
.................GATGCTGTGGCCAGTGCGCT............................................................................................................................................................................................	20	1	1.00	1	0	1	0	0
...............................................................................................................................................................................................CTGATCTCATCACGGAGG................	18	1	1.00	1	1	0	0	0
...........................................................................................................................................................................................................CGGAGGATGCGAGTATCGGC..	20	1	1.00	1	1	0	0	0
.............................................................................................................................................................................................................GAGGATGCGAGTATCGGCAC	20	1	1.00	1	0	1	0	0
........................TGGCCAGTGCGCTGGGAC.......................................................................................................................................................................................	18	1	1.00	1	1	0	0	0
....................................................................................................................................................................................................CTCATCACGGAGGATGCGAGTATCGGC..	27	1	1.00	1	0	1	0	0
...............TGGATGCTGTGGCCAGTGCGCTGGGACT......................................................................................................................................................................................	28	1	1.00	1	0	1	0	0
.........................................................................................................................................................................................................CACGGAGGATGCGAGTAT......	18	1	1.00	1	1	0	0	0
................GGATGCTGTGGCCAGTGCGCTGGG.........................................................................................................................................................................................	24	1	1.00	1	1	0	0	0
.....................CTGTGGCCAGTGCGCTGGGACT......................................................................................................................................................................................	22	1	1.00	1	0	1	0	0
...................TGCTGTGGCCAGTGCGCTGGGAC.......................................................................................................................................................................................	23	1	1.00	1	0	1	0	0
.................GATGCTGTGGCCAGTGCGCTGGG.........................................................................................................................................................................................	23	1	1.00	1	1	0	0	0
.................GATGCTGTGGCCAGTGCGCTGGGACTG.....................................................................................................................................................................................	27	1	1.00	1	0	1	0	0
........................................................................................................................................................................................................TCACGGAGGATGCGAGTATCGGC..	23	1	1.00	1	0	1	0	0
.......................................................................................................................................................................................................ATCACGGAGGATGCGAGTATCG....	22	1	1.00	1	0	1	0	0
........................................................................................................................................................................................................TCACGGAGGATGCGAGTA.......	18	1	1.00	1	1	0	0	0
.........ACGATGTGGATGCTGTGGC.....................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0
................................................................................................................................................................................TTGGTTGGATTTTCACTG...............................	18	2	0.50	1	1	0	0	0

dm3

AGTTCGCCGACGATGTGGATGCCGTAGCCAGTGCGCTGGGACTGAAGAAGGTTAGTTAGTTATAGACA--------------------G-------------TA---GC-TATGTAGCATTAGTA---T------------------------TGACTTTTGTGACATTT-ATAGATTGGTTGGATTTTCACTGATCTCATCACGGACGATGCGAGTATCGGCAC	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.................................CGCTGGGACTGAAGAAG...............................................................................................................................................................................	17	1	17.00	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	7	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................GCGCTGGGACTGAAGAAG...............................................................................................................................................................................	18	1	13.00	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
...........GATGTGGATGCCGTAGCC....................................................................................................................................................................................................	18	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................AGTGCGCTGGGACTGAAGA.................................................................................................................................................................................	19	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................GATTGGTTGGATTTTCAC.................................	18	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........GACGATGTGGATGCCGTAGCC....................................................................................................................................................................................................	21	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................GATTGGTTGGATTTTCACT................................	19	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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..........................................................................................................................................................................................................ACGGACGATGCGAGTATCGGC..	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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..............................................................................................................................................................................................ACTGATCTCATCACGGACGATC.............	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................GTAGCCAGTGCGCTGGGACTGAAGAATC..............................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................GATTGGTTGGATTTTCACTGA..............................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................TGCGCTGGGACTGAAGAATC..............................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................ATCACGGACGATGCGATC........	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................TGATCTCATCACGGACGATGCGA..........	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................ATCTCATCACGGACGATGCGA..........	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................CTGATCTCATCACGGACGA...............	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEre2

AGTTCGCTGACGATGTGGATGCCGTTGCCAGTGCGCTAGGACTGAAAAAGGTTAGTTAT--A--A----------------CTACC-ACA----------AAAG----TT-GCCTTTTTT--ATT---T------------------------TTTCATTTCTGACGTTC-TTAGATTGGTTGGATTTTCACTGATCTCATCACGGAGGATGCGAGTGTCGGCAC	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.........................................................................................................................................................................................................CACGGAGGATGCGAGTGTCGGC..	22	1	3.00	3	0	0	0	0	2	1	0
.............................................................................................................................................................................................................GAGGATGCGAGTGTCGGCA.	19	1	2.00	2	2	0	0	0	0	0	0
........GACGATGTGGATGCCGTTGCCAGTGCG..............................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	1	0	0
...........GATGTGGATGCCGTTGCCA...................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0
..................................................................................................................................................................................................ATCTCATCACGGAGGATGCGAGTGTC.....	26	1	1.00	1	0	0	0	0	1	0	0
.....GCTGACGATGTGGATGCCGTTGCCAG..................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
..........................................................................................................................................................................................TTTCACTGATCTCATCACGGA..................	21	1	1.00	1	0	0	0	0	1	0	0
...TCGCTGACGATGTGGATGCC..........................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
...........GATGTGGATGCCGTTGCCAGTGCGC.............................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
.............TGTGGATGCCGTTGCCAGTGCGCT............................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0	0
..................................................................................................................................................................................................ATCTCATCACGGAGGATGCGAGT........	23	1	1.00	1	1	0	0	0	0	0	0
..........................................................................................................................................................................................TTTCACTGATCTCATCACGGAGGAT..............	25	1	1.00	1	1	0	0	0	0	0	0
...............................TGCGCTAGGACTGAAAAAGA..............................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0
..............................................................................................................................................................................GATTGGTTGGATTTTCACTGAT.............................	22	1	1.00	1	0	0	0	0	0	1	0
.............................................................................................................................................................................................................GAGGATGCGAGTGTCGGC..	18	1	1.00	1	1	0	0	0	0	0	0
........................................................................................................................................................................................................TCACGGAGGATGCGAGTGTCGGC..	23	1	1.00	1	0	0	0	0	0	1	0
..............................................................................................................................................................................................ACTGATCTCATCACGGAGGATGCG...........	24	1	1.00	1	1	0	0	0	0	0	0
..............................................................................................................................................................................GATTGGTTGGATTTTCACTGA..............................	21	1	1.00	1	0	0	0	0	1	0	0
...TCGCTGACGATGTGGATGCCGT........................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1	0
..............................................................................................................................................................................GATTGGTTGGATTTTCACT................................	19	1	1.00	1	1	0	0	0	0	0	0
...........GATGTGGATGCCGTTGCCAGTGC...............................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0	0
.......................GTTGCCAGTGCGCTAGGACTG.....................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
..............GTGGATGCCGTTGCCAGT.................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	1	0
...TCGCTGACGATGTGGATGCCGTTGCCA...................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................................................................................................................CTGATCTCATCACGGAGGATGCG...........	23	1	1.00	1	1	0	0	0	0	0	0
.......................................................................................................................................................................................................ATCACGGAGGATGCGAGTGTC.....	21	1	1.00	1	0	0	0	0	1	0	0
.............................................................................................................................................................................................CACTGATCTCATCACGGA..................	18	1	1.00	1	0	0	0	0	0	1	0
.........ACGATGTGGATGCCGTTGCC....................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
.............TGTGGATGCCGTTGCCAGTGCGCTAG..........................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
........................TTGCCAGTGCGCTAGGACT......................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0
.............................AGTGCGCTAGGACTGAAAAA................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................................................................................................ATTGGTTGGATTTTCACTGA..............................	20	1	1.00	1	1	0	0	0	0	0	0
......CTGACGATGTGGATGCCGTTGCCAGT.................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
.........................................................................................................................................................................................................CACGGAGGATGCGAGTGT......	18	1	1.00	1	0	0	0	0	1	0	0
...............................................................................................................................................................................................CTGATCTCATCACGGAGGATGCGAG.........	25	1	1.00	1	1	0	0	0	0	0	0
................................GCGCTAGGACTGAAAAAG...............................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0
..........................................................................................................................................................................................TTTCACTGATCTCATCACGGAGGATGC............	27	1	1.00	1	1	0	0	0	0	0	0
.............................AGTGCGCTAGGACTGAAAA.................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0
.......................GTTGCCAGTGCGCTAGGACTGAAAA.................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
...............................................................................................................................................................................................CTGATCTCATCACGGAGGA...............	19	1	1.00	1	1	0	0	0	0	0	0
...................TGCCGTTGCCAGTGCGCTA...........................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1	0
.GTTCGCTGACGATGTGGATGCC..........................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
.............TGTGGATGCCGTTGCCAGTGCG..............................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
...TCGCTGACGATGTGGATGCCG.........................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1	0
..............................................................................................................................................................................GATTGGTTGGATTTTCACTGATCTCA.........................	26	1	1.00	1	1	0	0	0	0	0	0
.................................................................................................................................................................................TGGTTGGATTTTCACTGAT.............................	19	1	1.00	1	1	0	0	0	0	0	0
..................................................................................................................................................................................................ATCTCATCACGGAGGATGC............	19	1	1.00	1	1	0	0	0	0	0	0
........GACGATGTGGATGCCGTT.......................................................................................................................................................................................................	18	2	0.50	1	1	0	0	0	0	0	0
..............................................................................................................................................................................GATTGGTTGGATTTTCAAA................................	19	7	0.14	1	0	0	0	0	1	0	0

droYak3

AGTTCGCCGACGATGTGGATGCCGTGGCCAGTGCGCTAGGACTGAAGAAGGTTAGTTAA--A--A----------------CTATT-ATG----------CGAG----TT-ATGTTGTTTGATTG---T------------------------TGACATTTGTTTGTTTCATTAGATTGGTTGGATTTTCACTGATCTCATCACGGAGGATGCAAGCATTGGCAC	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.....GCCGACGATGTGGATGCCGT........................................................................................................................................................................................................	20	1	3.00	3	0	0	0	0	0	0	3	0	0	0	0
........GACGATGTGGATGCCGTGGCC....................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
.................................................................................................................................................................................TGGTTGGATTTTCACTGATCTCATC.......................	25	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................CTGATCTCATCACGGAGGATGCA...........	23	1	2.00	2	0	0	0	0	0	1	1	0	0	0	0
......................................................................................................................................................................................................CATCACGGAGGATGCAAGCA.......	20	1	2.00	2	0	0	0	0	0	0	2	0	0	0	0
..............................................................................................................................................................................................ACTGATCTCATCACGGAGGATGCAAGC........	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
......................CGTGGCCAGTGCGCTAGGACTGAAGAAG...............................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................AGATTGGTTGGATTTTCA..................................	18	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0
.................................................................................................................................................................................................GATCTCATCACGGAGGATGCAAGCATTGG...	29	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.........ACGATGTGGATGCCGTGGCCAGTGCGCT............................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
........................................................................................................................................................................................ATTTTCACTGATCTCATCACGGAGGATGC............	29	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..TTCGCCGACGATGTGGATGCCGTGGCC....................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
......................................................................................................................................................................................................CATCACGGAGGATGCAAGCAT......	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
............ATGTGGATGCCGTGGCCA...................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0
...............TGGATGCCGTGGCCAGTGCG..............................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...................................................................................................................................................................................................TCTCATCACGGAGGATGCAAGC........	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..........................................................................................................................................................................................TTTCACTGATCTCATCACGGAGGATGC............	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...............................................................................................................................................................................................CTGATCTCATCACGGAGGATGC............	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...................................................................................................................................................................................................TCTCATCACGGAGGATGCAAGCA.......	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.GTTCGCCGACGATGTGGATGCC..........................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
................................................................................................................................................................................TTGGTTGGATTTTCACTGAT.............................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
......................................................................................................................................................................................................CATCACGGAGGATGCAAGCATTGGCA.	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
............ATGTGGATGCCGTGGCCAGTGCGCT............................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
........GACGATGTGGATGCCGTGGCCAGTGCGCT............................................................................................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
........GACGATGTGGATGCCGTGGC.....................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..............................GTGCGCTAGGACTGAAGAAG...............................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...........GATGTGGATGCCGTGGCCAGTGCGCT............................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.........ACGATGTGGATGCCGTGGCCAGTG................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..............................................................................................................................................................................................ACTGATCTCATCACGGAGGA...............	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...............................................................................................................................................................................................CTGATCTCATCACGGAGGATGCAAGCA.......	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
............ATGTGGATGCCGTGGCCAGTG................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.................................................................................................................................................................................................GATCTCATCACGGAGGATGCAAG.........	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................................................................................................................ATCTCATCACGGAGGATGCAAGC........	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
........................................................................................................................................................................................................TCACGGAGGATGCAAGCATT.....	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................................CACTGATCTCATCACGGAGGAT..............	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...............................................................................................................................................................................................CTGATCTCATCACGGAGGAT..............	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
....CGCCGACGATGTGGATGCCG.........................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
....CGCCGACGATGTGGATGCC..........................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................TTTTCACTGATCTCATCACGGAGGATGC............	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0

droEug1

AGGGAGCAGATGATGTGGATGCGGTGGCCACTGCACTTGGACTGAAGAAGGTGTGCTTT--T--A----------------CTATT-ATT----------AGAA----TCGACTTTATTTTTCTA---A------------------------TGATTTCTGTGCATATT-ACAGATTGGTTGGATTTTCACTGATCTCATCACGGAAGATGCGAGTGTCGGCAC	Size	Hit Count	Total Norm	Total
No Reads

droBia1

AGGGAGCCGACGATGTGGATGCCGTGGCCACTGCGCTGGGACTGAAGAAGGTGAGCTAA--C--T-------ACCTGAAAACC----TAA----------A-AG------------ATATTGCAA---C---TTA---TAT--T---TTTATT--------------TTT-CCAGATTGGTTGGATTTTTACTGATCTCATCACGGAAGATGCGAGTATCGGCAC	Size	Hit Count	Total Norm	Total
No Reads

droTak1

AGGGAGCCGACGAGGTGGATGCCGTGGCCAGTGCGCTGGGACTGAAGAAGGTGAGCTAC--T--T-------TTATTA----------C-------------CA---AC-TATCTAATATTACGA---C------------------------TAATATTTGTGTATTTC-CCAGATTGGTTGGATTTTCACTGATCTCATCACGGAGGATGCGAGTGTCGGCAC	Size	Hit Count	Total Norm	Total
No Reads

droEle1

AGGGAGCCGATGATGTGGATGCCGTGGCCAATGCGCTGGGACTGAAGAAGGTTAGCTAT--T--A----------------CTCTTTGTTCTAGTTTCAT------------TAACCGTCTG-TTACA--AT--TTAT---------GTCAAC--------------TTT-ACAGATTGGTTGGATTTTTACTGATCTCATCACGGAGGATGCGAGCGTCGGCAC	Size	Hit Count	Total Norm	Total
No Reads

droRho1

AGGGAGCCGATGATGTGGATGCCGTGGCTAGTGCGCTTGGACTAAAGAAGGTGAGCCTT-----A----------------CTCTTTATTGTAGACCCAT------------CA-GTAATCTCTAACG--AT--CTTT---------ATTATA--------------TTT-ACAGATTGGCTGGATTTTTACTGATCTCATCACGGAGGATGCGAGCGTCGGCAC	Size	Hit Count	Total Norm	Total
No Reads

droFic1

AGGGTGCTGATGATGTGGATGCTGTGGCAACTGCGCTAGGATTGAAGAAGGTGAGCCAT--T--A----------------CCATTTGTTTTAAATTTGT---------------GAAATCTTTA------A--TAAT---------GGTAAT--------------TCC-ACAGATTGGTTGGATTTTCACTGATCTCATCACGGAGGATGCGACTGTGGGCAC	Size	Hit Count	Total Norm	Total
No Reads

droKik1

AGGGAGCAGACGATGTGGATGCCGTGGCCAACGCGCTGGGATTGAAAAAGGTGGGAATA--C-----AGTGTATA---------------------------ATGCA----ATCAAATTCAAGGC---TAA-T-----T-G---TTAATTTTT--------------CAA-ACAGATTGGTTGGATATTCACTGATCTCATCACGGAGGATGCTAGTGCCGGCAC	Size	Hit Count	Total Norm	Total
No Reads

droAna3

AGGGCGCCGACGAAGTGGAGGCTGTTGCTGCGGCTTTGGGACTAAAGAAGGTGAGTTGG--G--A----------------TT----TAA----------A-AGGCATT---CGTGAGTTGCTTA---TCA-C-----T-T---TCAACTTGT--------------CCC-ACAGATTGGCTGGATTTTTACTGATCTCATCACAGAGGATGCTAGTGTGGGCAC	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.............................................................................................................................................................................................................GAGGATGCTAGTGTGGGC..	18	1	3.00	3	0	0	0	0	1	2
.............................................................................................................................................................................................................GAGGATGCTAGTGTGGGCAC	20	1	3.00	3	2	0	0	0	1	0
.......................GTTGCTGCGGCTTTGGGACT......................................................................................................................................................................................	20	1	2.00	2	1	0	0	0	0	1
.......................GTTGCTGCGGCTTTGGGACTAAAG..................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	2
.........ACGAAGTGGAGGCTGTTGCTGC..................................................................................................................................................................................................	22	1	2.00	2	2	0	0	0	0	0
..............................................................................................................................................................................GATTGGCTGGATTTTTACTGATCTCA.........................	26	1	2.00	2	0	0	0	0	0	2
........GACGAAGTGGAGGCTGTTGCTGCGGCT..............................................................................................................................................................................................	27	1	2.00	2	0	0	0	0	0	2
..............GTGGAGGCTGTTGCTGCGGCT..............................................................................................................................................................................................	21	1	2.00	2	2	0	0	0	0	0
.....................CTGTTGCTGCGGCTTTGGGAC.......................................................................................................................................................................................	21	1	2.00	2	2	0	0	0	0	0
.............AGTGGAGGCTGTTGCTGCGGCTTTGGGA........................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0
................GGAGGCTGTTGCTGCGGCTTTG...........................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
.............................GCGGCTTTGGGACTAAAGAAGA..............................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0
.............................................................................................................................................................................................TACTGATCTCATCACAGAGGAT..............	22	1	1.00	1	0	0	0	0	0	1
..............................................................................................................................................................................GATTGGCTGGATTTTTACTG...............................	20	1	1.00	1	1	0	0	0	0	0
............AAGTGGAGGCTGTTGCTGCGGCTTTGG..........................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
....................GCTGTTGCTGCGGCTTTGGGAC.......................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
.....GCCGACGAAGTGGAGGCTGTTGCTGCG.................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
.............AGTGGAGGCTGTTGCTGCGGCTTTGGG.........................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	1
............................TGCGGCTTTGGGACTAAA...................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................TTACTGATCTCATCACAGAGGATGCT...........	26	1	1.00	1	0	0	0	0	0	1
...............TGGAGGCTGTTGCTGCGGCTTTGGGACT......................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
............AAGTGGAGGCTGTTGCTGCGGC...............................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
.......CGACGAAGTGGAGGCTGTTGC.....................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0
....................GCTGTTGCTGCGGCTTTGGGACTAA....................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................ATTGGCTGGATTTTTACTGATCTC..........................	24	1	1.00	1	0	0	0	0	0	1
AGGGCGCCGACGAAGTGGAGGCTGTT.......................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
.........................TGCTGCGGCTTTGGGACTAAAGAA................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
........................................................................................................................................................................................................TCACAGAGGATGCTAGTGTGGGC..	23	1	1.00	1	0	0	0	0	1	0
..........................................................................................................................................................................................................ACAGAGGATGCTAGTGTGGGC..	21	1	1.00	1	0	0	0	0	0	1
.................GAGGCTGTTGCTGCGGCTTTGGGACT......................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................AGATTGGCTGGATTTTTACT................................	20	1	1.00	1	0	0	0	0	0	1
.......................GTTGCTGCGGCTTTGGGACTA.....................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1
................GGAGGCTGTTGCTGCGGCTTTGGGACT......................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................................................CACAGAGGATGCTAGTGTGGGC..	22	1	1.00	1	0	0	0	0	1	0
...................GGCTGTTGCTGCGGCTTTGGGA........................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
...................GGCTGTTGCTGCGGCTTTGGGACTAAAG..................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0
...................GGCTGTTGCTGCGGCTTTGGG.........................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................CTGATCTCATCACAGAGGATGCT...........	23	1	1.00	1	0	0	0	0	0	1
...GCGCCGACGAAGTGGAGGCTGTTGC.....................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	1	0
..............GTGGAGGCTGTTGCTGCGGCTTTGG..........................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
................GGAGGCTGTTGCTGCGGCT..............................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0

droBip1

AGGGAGCCGACGATGTGGAGGCTGTTGCCACGGCCTTGGGGCTAAAGAAGGTAAGTTAA--G--A----------------TT----TTA----------AGAG-TT-TA-TTGCTACGT--------T---------CATCATTTAATTTTT--------------CCC-GTAGATTGGCTGGATTTTTACTGATCTCATCACAGAGGATGCTAGTGTGGGCAC	Size	Hit Count	Total Norm	Total
No Reads

dp5

AGGGCGACGCCGAAGTCGATGCTGTAGCCAATGCGTTAGGACTGAAGAAGGTGCGCCGG--AAAGACACT-TCTTTTACA-------------------------------CTATAGGTTTACTA---CAA-TTT---T-G--T---TTTTTT--------------TTT-ATAGATTGGTTGGATATTCACTGATCTCATCACGGATGATGCAACTGCAGGAAC	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
..........................................................................................................................................................................................................ACGGATGATGCAACTGCAGGAAC	23	1	10.00	10	0	1	0	0	0	0	1	0	8	0
.........................................................................................................................................................................................................CACGGATGATGCAACTGCAGGAAC	24	1	9.00	9	0	2	0	0	0	0	4	0	3	0
..........................................................................................................................................................................................ATTCACTGATCTCATCACGGATGAT..............	25	1	5.00	5	0	4	0	0	0	0	1	0	0	0
............................................................................................................................................................................................TCACTGATCTCATCACGGATGAT..............	23	1	5.00	5	0	4	0	0	0	0	1	0	0	0
...........................................................................................................................................................................................TTCACTGATCTCATCACGGATGAT..............	24	1	5.00	5	0	5	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................ATCACGGATGATGCAACTGCAGGAAC	26	1	4.00	4	0	1	0	0	0	0	0	0	3	0
........................................................................................................................................................................................................TCACGGATGATGCAACTGCAGGAAC	25	1	4.00	4	1	0	0	0	0	1	0	0	2	0
..........................................................................................................................................................................................ATTCACTGATCTCATCACGGATGATG.............	26	1	3.00	3	0	3	0	0	0	0	0	0	0	0
.......CGCCGAAGTCGATGCTGTAGCC....................................................................................................................................................................................................	22	1	3.00	3	0	0	0	0	0	0	0	0	3	0
...............................................................................................................................................................................................CTGATCTCATCACGGATGAT..............	20	1	3.00	3	0	2	0	0	0	0	1	0	0	0
.......................GTAGCCAATGCGTTAGGACTGAAG..................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	2	0
..............................................................................................................................................................................GATTGGTTGGATATTCACTG...............................	20	1	2.00	2	0	1	0	0	0	0	1	0	0	0
...........GAAGTCGATGCTGTAGCCAATGCG..............................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	2	0
.......................................................................................................................................................................................................ATCACGGATGATGCAACTGCAGGA..	24	1	2.00	2	0	0	0	0	0	0	0	0	2	0
.........CCGAAGTCGATGCTGTAGCC....................................................................................................................................................................................................	20	1	2.00	2	1	0	0	0	0	0	1	0	0	0
...........GAAGTCGATGCTGTAGCCA...................................................................................................................................................................................................	19	1	2.00	2	0	2	0	0	0	0	0	0	0	0
........GCCGAAGTCGATGCTGTAGCCAA..................................................................................................................................................................................................	23	1	2.00	2	0	1	0	0	0	0	1	0	0	0
........................................................................................................................................................................................................TCACGGATGATGCAACTGCA.....	20	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................ACTGATCTCATCACGGATGAT..............	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........GAAGTCGATGCTGTAGCCAAT.................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0
.......................GTAGCCAATGCGTTAGGACT......................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0
...................................................................................................................................................................................GTTGGATATTCACTGATCTC..........................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................TGATCTCATCACGGATGATGCAACTGCA.....	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................ATCTCATCACGGATGATGCAACTG.......	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................CACTGATCTCATCACGGATGATGCA...........	25	1	1.00	1	1	0	0	0	0	0	0	0	0	0
.....................CTGTAGCCAATGCGTTAGGA........................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................CACTGATCTCATCACGGATGATGCAACTG.......	29	1	1.00	1	0	0	0	0	0	0	1	0	0	0
.............................AATGCGTTAGGACTGAAGAAG...............................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0
................................................................................................................................................................................TTGGTTGGATATTCACTGATCTCA.........................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................TATTCACTGATCTCATCACGGAT.................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................ACTGATCTCATCACGGATGATGCAACTG.......	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................CTGATCTCATCACGGATGATG.............	21	1	1.00	1	0	0	0	0	0	1	0	0	0	0
.....................................................................................................................................................................................................TCATCACGGATGATGCAACTG.......	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............AAGTCGATGCTGTAGCCAATGCGTT............................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0
......................TGTAGCCAATGCGTTAGGACTG.....................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................GATCTCATCACGGATGATGCAACT........	24	1	1.00	1	0	0	0	0	0	1	0	0	0	0
..........................GCCAATGCGTTAGGACTGAA...................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........GCCGAAGTCGATGCTGTAGCCA...................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................CACTGATCTCATCACGGATGAT..............	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................GTAGCCAATGCGTTAGGACTG.....................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0
.......................................................................................................................................................................................................ATCACGGATGATGCAACTGCA.....	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................GATCTCATCACGGATGATGCA...........	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....GACGCCGAAGTCGATGCTGTAGC.....................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................TTCACTGATCTCATCACGGATGATG.............	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................CGGATGATGCAACTGCAGGAAC	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................GATGCTGTAGCCAATGCGTTAGGACTG.....................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0
..............GTCGATGCTGTAGCCAATG................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	1	0
............................................................................................................................................................................................................GGATGATGCAACTGCAGGAA.	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................CTGATCTCATCACGGATGATGCA...........	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................ACTGATCTCATCACGGATGATG.............	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................GGTTGGATATTCACTGAT.............................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................ATCTCATCACGGATGATGCAACTGC......	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................GCCAATGCGTTAGGACTGAAGA.................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	1	0	0
........................TAGCCAATGCGTTAGGACTGAAG..................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................ATGATGCAACTGCAGGAAC	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................ACGGATGATGCAACTGCA.....	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................CTCATCACGGATGATGCAACTGC......	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0
...............................................................................................................................................................................ATTGGTTGGATATTCACTGATC............................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................TAGCCAATGCGTTAGGACTG.....................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0	0	0	0
.....GACGCCGAAGTCGATGCTGTAGCCAATGC...............................................................................................................................................................................................	29	1	1.00	1	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................GATATTCACTGATCTCATCACGGATGATG.............	29	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................TCACTGATCTCATCACGGATGATG.............	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................AGCCAATGCGTTAGGACTGAAGAAG...............................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....GACGCCGAAGTCGATGCTGTAGCCA...................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................ACTGATCTCATCACGGATGATGCA...........	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0
.............................................................................................................................................................................AGATTGGTTGGATATTCACT................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0
.........................................................................................................................................................................................TATTCACTGATCTCATCACGGATGAT..............	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................GATGATGCAACTGCAGGAAC	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................TGGTTGGATATTCACTGATC............................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................TGTAGCCAATGCGTTAGGACTGAAG..................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	1	0

droPer2

AGGGGGACGCCGAAGTCGATGCTGTAGCCAATGCGTTAGGACTGAAGAAGGTGCGCGGG--AAAGACACT-TCTTTTACA-------------------------------CTATAGGTTTACAA---CAC-TTT---T-G--T---GTTTTT--------------TTT-ATAGATTGGTTGGATATTCACTGATCTCATCACGGATGATGCAACTGCAGGAAC	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.......................................................................................................................................................................................................ATCACGGATGATGCAACTGCAGGAAC	26	1	5.00	5	0	0	0	0	0	5
.........................................................................................................................................................................................................CACGGATGATGCAACTGCAGGAAC	24	1	3.00	3	0	0	0	0	0	3
...............................................................................................................................................................................ATTGGTTGGATATTCACTGATCT...........................	23	1	3.00	3	3	0	0	0	0	0
...........................................................................................................................................................................................TTCACTGATCTCATCACGGATGAT..............	24	1	2.00	2	0	2	0	0	0	0
............................CAATGCGTTAGGACTGAAGA.................................................................................................................................................................................	20	1	2.00	2	2	0	0	0	0	0
............................................................................................................................................................................................TCACTGATCTCATCACGGATGAT..............	23	1	2.00	2	0	1	0	0	0	1
.....GACGCCGAAGTCGATGCTGTAGCCA...................................................................................................................................................................................................	25	1	2.00	2	2	0	0	0	0	0
..............GTCGATGCTGTAGCCAATGCGTT............................................................................................................................................................................................	23	1	2.00	2	0	0	0	0	0	2
....................GCTGTAGCCAATGCGTTAGGA........................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1
...........GAAGTCGATGCTGTAGCCAATGCGTTA...........................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	1
............................CAATGCGTTAGGACTGAAGG.................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................TGGATATTCACTGATCTCA.........................	19	1	1.00	1	0	1	0	0	0	0
..........................GCCAATGCGTTAGGACTGAAGA.................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
......................TGTAGCCAATGCGTTAGGACTGAAGAA................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	1
.....................................................................................................................................................................................................TCATCACGGATGATGCAACTGCAGGAAC	28	1	1.00	1	0	0	0	0	0	1
..........................GCCAATGCGTTAGGACTGAAGAAGA..............................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	1
..........................................................................................................................................................................................................ACGGATGATGCAACTGCAGGA..	21	1	1.00	1	0	1	0	0	0	0
..............................................................................................................................................................................................ACTGATCTCATCACGGATGATG.............	22	1	1.00	1	0	1	0	0	0	0
....GGACGCCGAAGTCGATGCTGTAG......................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	1
...GGGACGCCGAAGTCGATGCTGT........................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
.................GATGCTGTAGCCAATGCGTTAGGACTG.....................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	1
......................TGTAGCCAATGCGTTAGGACT......................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1
.................................................................................................................................................................................................GATCTCATCACGGATGATG.............	19	1	1.00	1	0	1	0	0	0	0
..GGGGACGCCGAAGTCGATGCT..........................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
.................GATGCTGTAGCCAATGCGTT............................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
......................................................................................................................................................................................................CATCACGGATGATGCAACTGCAGGAAC	27	1	1.00	1	0	0	0	0	0	1
............................................................................................................................................................................................TCACTGATCTCATCACGGA..................	19	1	1.00	1	0	1	0	0	0	0
........................................................................................................................................................................................................TCACGGATGATGCAACTGCA.....	20	1	1.00	1	0	1	0	0	0	0
....................GCTGTAGCCAATGCGTTAGGACTGAAG..................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	1
................CGATGCTGTAGCCAATGCGT.............................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
.........................................................................................................................................................................................................CACGGATGATGCAACTGCAGGA..	22	1	1.00	1	0	1	0	0	0	0
.......CGCCGAAGTCGATGCTGTAGC.....................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1
...............................................................................................................................................................................................................TGATGCAACTGCAGGAAC	18	1	1.00	1	0	1	0	0	0	0
.........................................................................................................................................................................................................CACGGATGATGCAACTGCA.....	19	1	1.00	1	0	1	0	0	0	0
........GCCGAAGTCGATGCTGTAGCCA...................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1
.............................................................................................................................................................................................................GATGATGCAACTGCAGGAAC	20	1	1.00	1	0	1	0	0	0	0
.................GATGCTGTAGCCAATGCGTTA...........................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1
.........CCGAAGTCGATGCTGTAGCC....................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
................CGATGCTGTAGCCAATGCGTTAGGACT......................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	1
...............................TGCGTTAGGACTGAAGAAGA..............................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
...................................................................................................................................................................................GTTGGATATTCACTGATCTCAT........................	22	1	1.00	1	0	1	0	0	0	0
.......................................................................................................................................................................................................ATCACGGATGATGCAACTGCAGGAA.	25	1	1.00	1	0	0	0	0	0	1
.......................................................................................................................................................................................GATATTCACTGATCTCATCACGGATGAT..............	28	1	1.00	1	0	0	0	0	0	1
......................TGTAGCCAATGCGTTAGGACTGAAG..................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	1
...........GAAGTCGATGCTGTAGCCAATGCGTT............................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	1
.......................................................................................................................................................................................................ATCACGGATGATGCAACT........	18	1	1.00	1	0	1	0	0	0	0
...GGGACGCCGAAGTCGATGCTG.........................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
...........................................................................................................................................................................................................CGGATGATGCAACTGCAGGAAC	22	1	1.00	1	0	1	0	0	0	0
...................................................................................................................................................................................GTTGGATATTCACTGATCT...........................	19	1	1.00	1	0	1	0	0	0	0

droWil2

AGGGGTCTGCCGATGTAGAAGCTGTGGCAGCTGCTTTAGGGCTGAAAAAAGTAAGATAT--A--T----------------TAAA-TTC-------------CA---TC-TGTGATACTTGCTAA---ATG-A-----T-T--T---GTATT--------------GATT-GCAGATTGGTTGGATTTTCACGGATCTAATAACGGCCGATGCCACCGTTGGCAC	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.........................................................................................................................................................................................TTTTCACGGATCTAATAACGGCC.................	23	1	2.00	2	1	0	1	0	0
.......................GTGGCAGCTGCTTTAGGGCT......................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0
......................TGTGGCAGCTGCTTTAGGGC.......................................................................................................................................................................................	20	1	1.00	1	0	0	0	1	0
...........GATGTAGAAGCTGTGGCA....................................................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0
.......................GTGGCAGCTGCTTTAGGGCTGAAAA.................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0
................................................................................................................................................................................TTGGTTGGATTTTCACGGATCTAATA.......................	26	1	1.00	1	1	0	0	0	0
...............................................................................................................................................................................ATTGGTTGGATTTTCACGG...............................	19	1	1.00	1	0	0	1	0	0
............................................................................................................................................................................................TCACGGATCTAATAACGGCC.................	20	1	1.00	1	1	0	0	0	0
..................................................................................................................................................................................................ATCTAATAACGGCCGATGCCACCGTTG....	27	1	1.00	1	0	1	0	0	0
..GGGTCTGCCGATGTAGAA.............................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
.................................................................................................................................................................................................GATCTAATAACGGCCGATGC............	20	1	1.00	1	0	1	0	0	0
...............................................................................................................................................................................ATTGGTTGGATTTTCACGGATCT...........................	23	1	1.00	1	1	0	0	0	0
........................................................................................................................................................................................ATTTTCACGGATCTAATAAC.....................	20	1	1.00	1	0	0	0	1	0
.......TGCCGATGTAGAAGCTGTGGCAGCTG................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0
...................................................................................................................................................................................GTTGGATTTTCACGGATC............................	18	1	1.00	1	0	1	0	0	0

droVir3

AGGGCGCAGATGAAGTAGATGCCGTAGCCAAGGCATTAGGGCTTAAAAAGGTGTGTGCC--TGAACA------------------TTTTCCT-------------------ATTTGGATTTATTCATG--AA--TTAA---------ATTCCT--------------GTG-ACAGATTGGCTGGATCTTTACGGATCTGATTACGGAAGATGCCAGTGCGGGCAC	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
........GATGAAGTAGATGCCGTAGCCA...................................................................................................................................................................................................	22	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................GTAGCCAAGGCATTAGGGCTTA....................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................AGCCAAGGCATTAGGGCTTA....................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................TGCCGTAGCCAAGGCATTAGGGCTTAAA..................................................................................................................................................................................	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................GATTACGGAAGATGCCAGT........	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................AGATTGGCTGGATCTTTACGGA..............................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................GATCTGATTACGGAAGATGCCA..........	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................TTGGCTGGATCTTTACGGATCTGATT.......................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................CTTTACGGATCTGATTACGGA..................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................ATTGGCTGGATCTTTACGGATCTGA.........................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GTGTGTGCC--TGAACA------------------TTTTCCT-------------------ATT...............................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................GCTGGATCTTTACGGATCTGA.........................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................TAGCCAAGGCATTAGGGCT......................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
AGGGCGCAGATGAAGTAGATGCCG.........................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................GGAAGATGCCAGTGCGGGCAC	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........GAAGTAGATGCCGTAGCCAAGGC...............................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........GAAGTAGATGCCGTAGCC....................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................GTAGCCAAGGCATTAGGGCTT.....................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................GATCTGATTACGGAAGAT..............	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................GAAGATGCCAGTGCGGGCA.	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................GATCTGATTACGGAAGATA.............	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................AAGATGCCAGTGCGGGCAC	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................AAGGCATTAGGGCTTAAAA.................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................TTGGCTGGATCTTTACGGATCT...........................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................AGATTGGCTGGATCTTTAC.................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................GGCTGGATCTTTACGGATCTGATTAC.....................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................AGATTGGCTGGATCTTTACGGATC............................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................ATTGGCTGGATCTTTACGGA..............................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.........................................................................................................................................................................................................TACGGAAGATGCCAGTGCGGGCA.	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....GCAGATGAAGTAGATGCCGTA.......................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...GCGCAGATGAAGTAGATGCC..........................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................GATTACGGAAGATGCCAGTGCGGGCAC	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................TGGCTGGATCTTTACGGATCTG..........................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......AGATGAAGTAGATGCCGTA.......................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................TGCCGTAGCCAAGGCATTAGGGCT......................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

AGAACGCTGATGAAGTGGATGCCGTAGCCAAAGCACTAGGACTTAAAAAGGTGAGCAAT--CAATAA------------------ATTTCTA----------AG-------TT--GCAGTTT----TA--AA--TC-----------ATATT--------------ATTT-ATAGATTGGATGGATTTTCACGGATCTAATTACTGAAGATGCAAGCGCTGGCAC	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
............................................................................................................................................................................................................TGAAGATGCAAGCGCTGGCA.	20	1	2.00	2	1	0	0	0	0	1
....CGCTGATGAAGTGGATGCC..........................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
.........ATGAAGTGGATGCCGTAGCCA...................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
......................CGTAGCCAAAGCACTAGGA........................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1
....CGCTGATGAAGTGGATGCCGTAGCCAA..................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................AGATTGGATGGATTTTCACGGATCT...........................	25	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................................................TACTGAAGATGCAAGCGCTGGCA.	23	1	1.00	1	0	0	1	0	0	0

droGri2

AGGGCGCCGACGAGGTCGATGCTGTGGCCAAAGCCTTGGGACTTAAAAAGGTGAATGTC--T------------GTTAAA------TTT-------------CA-------GTTTGAATTGAATAATG--A-------TAT--T---GTTTC--------------TTTG-ACAGATTGGTTGGATCTTTACGGATCTTATAACGGAAGATGCCAGTGCGGGCAC	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

dsi_5663

3r:20959543-20959603 -

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads