ID:dsi_5617 |
Coordinate:3l:8276620-8276681 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -10.0 | -9.8 | -9.7 |
 |
 |
 |
intergenic
No Repeatable elements found
|
TCAGACCACGGGGAAGTCAGAGGAGGAAGCGAAGATAAGACATCAATTAGGTAAGTGGGAAGTAGAAGAGATTTATGACCATTTTTAAACTTTCTCTGGATCTCCCCCGTAGGTCTTGCCCTTCGATCCTCTGGCGATGCCGAAGGAGCCCACATTCAACTA
**************************************************......((((.((...(((((.....................)))))..)).))))......************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM343915 embryo |
M025 embryo |
M024 male body |
M023 head |
M053 female body |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|---|
| .............................................................GTAGAAGAGATTTATGACC.................................................................................. | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................TTTTAAACTTTCTCTGGAT............................................................. | 19 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................CTGGCGATGCCGGATGAACC............ | 20 | 3 | 6 | 0.50 | 3 | 0 | 0 | 1 | 1 | 1 | 0 |
| ...........................................................................................................CGTACGGCTTACCCTTCGA.................................... | 19 | 3 | 5 | 0.20 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................CTGGCGATGCGGAATGAACC............ | 20 | 3 | 8 | 0.13 | 1 | 0 | 0 | 1 | 0 | 0 | 0 |
| ............................................AATTGGGTAAGTGGGAAAT................................................................................................... | 19 | 2 | 10 | 0.10 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
|
AGTCTGGTGCCCCTTCAGTCTCCTCCTTCGCTTCTATTCTGTAGTTAATCCATTCACCCTTCATCTTCTCTAAATACTGGTAAAAATTTGAAAGAGACCTAGAGGGGGCATCCAGAACGGGAAGCTAGGAGACCGCTACGGCTTCCTCGGGTGTAAGTTGAT
**************************************************......((((.((...(((((.....................)))))..)).))))......************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR618934 dsim w501 ovaries |
SRR553488 RT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|
| ...................................................................................................................AACGGGAAGCTAGTAGA.............................. | 17 | 1 | 1 | 1.00 | 1 | 1 | 0 |
| ..................................................................................................CGAGATGGGGCATCCA................................................ | 16 | 2 | 10 | 0.10 | 1 | 1 | 0 |
| ....................................................................................AGTTTGAATGAGACCTA............................................................. | 17 | 2 | 15 | 0.07 | 1 | 0 | 1 |
| .................................................................................AAAAAGTTGAAAGAGA................................................................. | 16 | 1 | 20 | 0.05 | 1 | 0 | 1 |
| .....................................................................................................................CGGGAAGCTTGGAGAT............................. | 16 | 2 | 20 | 0.05 | 1 | 1 | 0 |
Generated: 04/24/2015 at 10:48 AM