ID:

dsi_5464

 Coordinate:

2l:9179220-9179533 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.2 -14.1 -14.0

Flybase annnotation

five_prime_UTR [2l_9179064_9179816_+]; exon [2l_9179064_9179816_+]

Repeatable elements

NameClassFamilyStrand
(TG)nSimple_repeatSimple_repeat+
mature
star
  1. dsi_5464  2l:9179314-9179331 +
  2. 2r:16127492-16127509 -

Sense Strand Reads

##############################################################################################################################################################################################################################################################################################################################################################################################################################
ACTAATCATACATAATCATACATTTTCGTGGAGCAAAAACACACGGCAATGTAAATGTTTGATTATATTTTCATTTAAAACGGAGCCAAACAACTGTGTACTTGTGTGAGTGTGTGTGCGTGCGGTGGCTGCGTGTTTGTGTGGAAAAGTGAAAATGCTATTTGGGCCATAATTGTATTGAAATTCTTAGCAACAACAACAAACCAAACCTCGAGTTCGTGGCAAAAAATAAGTTCAAAAAAAAGAGGAAAAACCCAACCAAAGGAAGTGAAAAAGTGAGCGGCTCAGGGATTTTTATGCTGTGCTCCAAGTGAAATAAAGTCTTTGGGAAATTATTATTTATTGTAATTCCTTCACTGAGGAAACATACAAAATAGAAAACAAAAAGATAATCTCCTGTCCCGCTCACACTTT
************************************************************************************************************************************************.................(((((((....((((...((...))...))))...............((.((....)).))..........(((((.........((......))..((...))...........))))))))))))****************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR902009
testis
 O001
Testis
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
...........................................................................................................................................................................................................................................................................GTGAAAAAGTGAGCGGCTCAG.............................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................ATTTTCGTGGAGCAAAAACACACGGCAAT............................................................................................................................................................................................................................................................................................................................................................................ 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................GGAGCAAAAACACACGGCAATTTTCA....................................................................................................................................................................................................................................................................................................................................................................... 26 3 1 1.00 1 1 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................AAGGAAGAGAAAAAGTGAGCGGCTCA............................................................................................................................... 26 1 1 1.00 1 0 0 0 1 0 0 0 0 0
................................................................................................................................................AAAAGTGAAAATGCTATT............................................................................................................................................................................................................................................................ 18 0 2 1.00 2 0 0 0 0 2 0 0 0 0
........................................................................................................TGTGACTGTGTGTGCGTACGG................................................................................................................................................................................................................................................................................................. 21 2 1 1.00 1 0 0 1 0 0 0 0 0 0
...................................................................................................................................................................GGGCCATAATTGTATTGAA........................................................................................................................................................................................................................................ 19 0 1 1.00 1 0 0 0 0 0 1 0 0 0
.............................GGAGCAAAAACACACGGCA.............................................................................................................................................................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0
......................................................................................................................................................................CCCTGATTGTATTGAAATTCTA.................................................................................................................................................................................................................................. 22 3 2 0.50 1 0 1 0 0 0 0 0 0 0
...............................................................................................................................GCTGCGCGTTGGTGCGGAAAA.......................................................................................................................................................................................................................................................................... 21 3 9 0.33 3 0 0 0 0 0 0 0 3 0
.................................................................................................................................................................................................................................................................................................................................................................................CAAAATACAAAACAAAAAGATC....................... 22 2 3 0.33 1 0 0 0 1 0 0 0 0 0
..........................................................................................................................................................................................................ACCAAACGTCGAGTT..................................................................................................................................................................................................... 15 1 6 0.33 2 0 0 0 0 0 0 2 0 0
.........................................................................................................................................................................TGACTGTATTGAAATTCT................................................................................................................................................................................................................................... 18 2 10 0.30 3 0 1 2 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................................................................................................TCCTTCACTGCGGAAA................................................. 16 1 4 0.25 1 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................................................................AAACCTCGATTTCGT.................................................................................................................................................................................................. 15 1 12 0.17 2 0 0 0 0 0 0 2 0 0
......................................................................................................................................................................CCCTAAATGTATTGAAATT..................................................................................................................................................................................................................................... 19 2 6 0.17 1 0 1 0 0 0 0 0 0 0
...........................................................................................................GAGTGTGTGTGCGTGCG.................................................................................................................................................................................................................................................................................................. 17 0 6 0.17 1 0 0 0 0 0 0 0 1 0
..........................................................................................................................................................................GACTGTATTGAAATTCT................................................................................................................................................................................................................................... 17 2 20 0.15 3 0 0 3 0 0 0 0 0 0
...............................AGCAAAAACACAGGGC............................................................................................................................................................................................................................................................................................................................................................................... 16 1 7 0.14 1 0 0 0 0 0 0 1 0 0
................................................................................................................TATGTGCGTGAGGGGGCTGC.......................................................................................................................................................................................................................................................................................... 20 3 7 0.14 1 0 0 0 0 0 0 0 1 0
.............................................................................................................................................................................TGTATTGAAATTCTAACC............................................................................................................................................................................................................................... 18 2 14 0.07 1 0 1 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................TAAGTTCAAAAAAAAGAAAAAAA.................................................................................................................................................................. 23 2 16 0.06 1 0 0 0 0 0 0 0 1 0
...................................................................TTTTCATTTAAAATGGA.......................................................................................................................................................................................................................................................................................................................................... 17 1 17 0.06 1 0 0 0 0 0 0 0 0 1
...............................................................................................................GTGTGTGCGTTCGGTGCC............................................................................................................................................................................................................................................................................................. 18 2 17 0.06 1 0 0 0 0 0 0 0 1 0
...........................................................................................................................................TGTGGAAAAGTGAAA.................................................................................................................................................................................................................................................................... 15 0 17 0.06 1 0 0 0 0 0 0 0 1 0
.........................................................................................................................................................................TGACTGTATTGAAATTC.................................................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 1 0 0 0 0 0 0
...........................................................................................................................................................................ACTGTATTGAAATTC.................................................................................................................................................................................................................................... 15 1 20 0.05 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................AATGTATTGAAATTCT................................................................................................................................................................................................................................... 16 1 20 0.05 1 0 0 1 0 0 0 0 0 0

Anti-sense strand reads

TGATTAGTATGTATTAGTATGTAAAAGCACCTCGTTTTTGTGTGCCGTTACATTTACAAACTAATATAAAAGTAAATTTTGCCTCGGTTTGTTGACACATGAACACACTCACACACACGCACGCCACCGACGCACAAACACACCTTTTCACTTTTACGATAAACCCGGTATTAACATAACTTTAAGAATCGTTGTTGTTGTTTGGTTTGGAGCTCAAGCACCGTTTTTTATTCAAGTTTTTTTTCTCCTTTTTGGGTTGGTTTCCTTCACTTTTTCACTCGCCGAGTCCCTAAAAATACGACACGAGGTTCACTTTATTTCAGAAACCCTTTAATAATAAATAACATTAAGGAAGTGACTCCTTTGTATGTTTTATCTTTTGTTTTTCTATTAGAGGACAGGGCGAGTGTGAAA
******************************************************************************************************************************.................(((((((....((((...((...))...))))...............((.((....)).))..........(((((.........((......))..((...))...........))))))))))))************************************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 GSM343915
embryo
...................................................................................................................................................................................................................................................................................................................................................................................................CTATTAGAGGACAGGGCGAGT...... 21 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................AAGTAAATTTTACCTAGGT...................................................................................................................................................................................................................................................................................................................................... 19 2 7 0.57 4 0 3 0 0 0 1 0
.....AGTAGGTATGAGTAGGTAAAAG................................................................................................................................................................................................................................................................................................................................................................................................... 22 3 2 0.50 1 0 0 0 1 0 0 0
...............................................................................................................................................................................................................................................................................................................................................AGAGAATAACATTAAGGAAGT.......................................................... 21 3 3 0.33 1 0 0 0 0 1 0 0
.................................................................TTAAAAGTAAATTTTACCTAGGT...................................................................................................................................................................................................................................................................................................................................... 23 3 3 0.33 1 0 0 1 0 0 0 0
.........................................................................................................................................................................................GACTCGTTGTTGTTGTTTCGTGT.............................................................................................................................................................................................................. 23 3 3 0.33 1 0 1 0 0 0 0 0
........................................................................................................................................................................................................TTTGGTTGGGAGCTGAAGC................................................................................................................................................................................................... 19 2 3 0.33 1 1 0 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................................AAATTAAAGTAAGGAAGTGACT...................................................... 22 3 7 0.14 1 0 0 1 0 0 0 0
..........................................................................................................................................................................................ACTCGTTGTTGTTGTTTCGTGT.............................................................................................................................................................................................................. 22 3 8 0.13 1 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................................................GCCTTATTGGGTTGGTTT....................................................................................................................................................... 18 2 9 0.11 1 0 0 0 0 1 0 0
...........................................................................................................................................................................................AGCGTTCTTGTTTTTTGGTTTG............................................................................................................................................................................................................. 22 3 10 0.10 1 0 1 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................................................TTTTTTATTAGAGGTCAGGA........... 20 3 12 0.08 1 0 0 0 0 0 0 1
....................................................................................................................................................................................................................................................................................................................................................CTAAAATTAAGCAAGTGACT...................................................... 20 3 20 0.05 1 0 0 0 0 1 0 0
........................................................CAAACTAATCTGAAAGT..................................................................................................................................................................................................................................................................................................................................................... 17 2 20 0.05 1 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:9179170-9179583 + dsi_5464 ACTA-ATCAT-ACATAATC-ATACA---TTTTCGTG--GAGC--------AAAAACACACGGCA-ATGTAAATGTTTGATTATAT-TTTCATTTAAAAC--GGAGCC----------------AA---ACAA---------CTGTGTA----------CTTGTGTGAGTG------TGTGTGCGT--------------------GCGGTGGCT------------GCGTGTT----------TGTGTG-------GAAAAGTGAAAAT--GCTATTTGGGCCATAA---TTGTATTGAAATTCTTA--GCAACAA-CA-ACAA--AC-CAA--ACCTCG-AGT---------TCGTGGCAAAAAAT---------AAGTTCAAAA-AAA----------------------A--------GAG-GAAAAACC--CAACC-----------------------------------------------------------------------AAAGGAAGTG---AAAAAGTGAGCGGCTCAGGGATTT-----------------------------------T------------------------TATGCTGTGCT-----------CCAA-----GTGAAATAAA-GTCTTTGGG----AAATT--ATTAT------TTATTGTAATTCCTTCACTGAGGAAACATACAA-AATAGAAAA-------------------------CAAAAAGATAA--------TCT------------C--CTGTCCCGCTCACACTTT
droSec2 scaffold_3:4942531-4942943 + ACTA-ATCAT-ACATAATC-ATACA---TTTTCGTG--GAGC--------AAAAACACATGGCA-ATGTAAATGTTTGATTATAT-TTCCATTTAAAAC--GGAGCC----------------AA---ACAA---------CTGTGTA----------CTTGTGTGAGTG------TGTGTGCGT--------------------GCGGTGGCT------------GCGTGCT----------TGTGTG-------GAAAAGTGAAAAT--GCTATTTGGGCCATAA---TTGTATTGAAATTCTTA--GCAACAA-CA-ACAA--AC-CAA--ACCTCG-AGT---------TCGTGGCAAAAAAT---------AAGTTCAT--TAAA----------------------A--------GAC-GAAAAACC--CAACA-----------------------------------------------------------------------GAAGGAAGTG---AAAAAGTGAGCGGCTCAGAGATTT-----------------------------------T------------------------TATGCTGTGCT-----------CCAA-----GTGAAATAAA-GTCTTTGGG----AAATA--ATTAT------TTATTGTAATTCCTTCACTGAGGAAACATATAA-AATAGAAAA-------------------------CAAAAAGATCA--------TCT------------C--CTGTCCCGCTCACACTTT
dm3 chr2L:9495607-9496022 + ACTA-ATCAT-ACATAATC-ATACA---TTTTCGTG--GAGC--------AAAAACACACGGCA-ATGTAAATGTTTGATTATAT-TTTCATTTAAAAC--GGAGCC----------------AA---ACAA---------CTGTGTA----------CTTGTGTGAGTG------TGTGTGCGT--------------------GCGGTGGCT------------GCGTGCT----------TGTGTG-------GAAAAGTGAAAAT--GCTATTTGGGCCATAA---TTGTATTGAAATTCTTA--GCAACAA-CA-ACAA--AC-CAA--ACCTCG-AGT---------TCGTGGCAAAAAAT---------AAGTTCGAAAAAAA----------------------A--------GAC-GAAAACCC--CAACA-----------------------------------------------------------------------AAAGGAAGTG---AAAAAGTGAGCGGCTCAGGGATTT--------------------------T--------T------------------------TATGCTGTGCT-----------CCAA-----GTGAAATAAA-GTCTTTGGG----AAATA--ATTAT------TTATTGTAATTCCTTCGCTGAGGAAACATACAA-AATAGAAAA-------------------------CAAAAAGATAA--------TCT------------C--CTGTCCCGCTCACACTTT
droEre2 scaffold_4929:10098847-10099261 + ACTA-ATCAT-ACATAATC-ATACA---TTTTCGTG--GAGC--------AAAAACACACGGCA-ATGTAAATGCTTGATTATAT-TTTCATTTAAAAC--GGAGCC----------------AA---ACAA---------CTGTGTA----------CTTGTGTGAGTG------TGTGTGCGT--------------------GCGGTGGCT------------GCGTGCT----------TGTGTG-------GAAAAGTGAAAAT--GCTATTTGGGCCATAA---TTGTATTGAAATTCTTA--GCAACAA-CA----AA--C-CAA--ACCTCG-AAT---------TCGTGGCAAAAAAGAATTAA------------A----------------AAAAATTCAAA--------AACGGAAAACCC-----------------------------------------------------C------AGA---------------AAAGGAAGGG--AAAAAAGTGAGCGGCTCAGGGATTT-----------------------------------T------------------------CATGCGGTGCT-----------CCAA-----GTGAAATAAT-GTCTTTGGG----AAATA--ATTAT------TAATTGCAATTCCTTCTCTGATGAAATGTACAA-GA-AGAAAA-------------------------CAGAGAGATAA--------TCC------------C--CTGTCCCGCTCACACTTT
droYak3 2L:12163742-12164139 + ACTA-ATCAT-ACATAATC-ATACA---TTTTCGTG--GAGC--------AAAAACACACGGCA-ATGTAAATGTTTGATTATAT-TTTCATTTAAAAC--GGAGCC----------------AA---ACCA---------CTGTGTA----------CTTGTGTGAGTGCGAGTGTGTGTGCGT--------------------GCGGTGGCT------------GCGTGTT----------TGTGTG-------GAAAAGTGAAAAT--GCTATTTGGGCCATAA---TTGTATTGAAATTCTTA--GCAACAA-CA----AA--C-CAA--ACCTCG-AAT---------TCGTGGCAAAAAAT---------ATGTTCA---TAAA----------------------A--------GGC-AAAAAACC--CAACC-----------------------------------------------------------------------C----AAGTG--AAAAAAGTGAGCGGTTTGGGAATTA-----------------------------------C------------------------CATGCGGTGAT-----------CCAA-----GTGAATTAAA-GTCTTTGGG----AAATA--ATTAA------TAATTGTACAT-------------------CAA-AAAAGAAAAAACCCA--------------------AGAAAGATAA--------CCT------------C--CTGTCCCGCTCACACTTT
droEug1 scf7180000406904:540853-541300 + ACTA-ATCAT-ACATAATC-ATACA---TTTTCGTG--GAGC--------AAAAACACACGGCAAATGTAAATGTTTGATTA--T-TTTCATTTAAAAC--GGAGCC----------------AA---ACAA---------CTGTTTA----------TGTGTATGTGTG------TGAGTGCCT--ATGTGT----TG-TGT--GAGCTGGCT------------GCGTGTT----------TGTGTG-------GAAAAGTGAAAAT--GCTATTTGGGCCATAA---TTGTATTGAAATTCTTA--GCAACAA-CA----A--TCG-GC--ACCTCA-AAT---------TCGTGGCAAAAAAAAT-TAAAAT-----TAAAG------AAGAG----------------GAAAC-------GA--AATCG-AAACAAAACAGAAACA--ACG---------------A----A--AAAGGTTC------AGGC---------------AAAGATGTG-AAAAAAAGTGAGCGGCGATGGGATTT-----------------------------------TTATGT-------GGTTGCTGT---TATGTG------------GTGACCAA-----GTGAAA--AAGCTCTTAACTACATAAATA--AATAT------TA----TTATTC---------GATATTAT-------------------------AAAAAAAG-GC----------ATTT--------TCT------------T--CTATCTCGCTCGAACTTG
droBia1 scf7180000302408:3685173-3685593 - ACTA-ATCAT-ACATAATC-ATACA---TTTTCGTG--GCGA--------AAACACACACGGCA-ATGTAAATGTTTGATTA--T-TTTCATTTAAAAC--GGAGCC----------------AA---ACAA---------CTGTGTA----------AGTGAGTGTGTG----TGTGTGTGTGT--------------------GCGCTGGCT------------GCGTGTT----------TGTGTG-------GAAAAGTGAAAAG--GCTATTTGGGCCATAA---TTGTATTGAAATTCTAA--GCAACAA-CA----AA-ACA-AC--ACCTCG-AAT---------TGGTGGCAAAAAAC---AAAA-----TTCAAAG------AAAAG----------------GAAAA-------GAAGAACC--GAACAAAACAGAAG-------------------------------------C------AGGC---------------AAAGAAGTG---GAAAAGTGAGCGGCGGTGCGATTT-----------------------------------T------------------------TCTGTG------------TTGGCCAA-----GTGGAA--AAGGTCTTAATT----GAGTA--AATAT------TAATCGGAAATTCGGCTTTGCGGAATAGTAACGA-AAATA---AATTC------------------------------A-CT-----TCG------------T--TCGTCTCCCTCGCACTCT
droTak1 scf7180000415207:56941-57408 - ACTA-ATCAT-ACATAATC-ATACA---TTTTCGTG--GGGC--------AAAAACACACGGCA-ATGTAAATGTTTGATTA--T-TTTCATTTAAAAC--GGAGCC----------------AA---ACAA---------CTGTGAA----------TGTGAGTGTGTG------TGTGAGCTT--GTGTGT------------TTGCTGGCT------------GCGTGTT----------TGTGTG-------GAAAAGTGAAAAT--GCTATTTGGGCCATAA---TTGTATTGAAATTCTTA--GCAACAA-CAAACAA--ACG-GC--ACCTCG-AAA---------TCGTGGCAAAAAAT---AAAAAT-----TAAAGGAAGCGAAGAA----------------GAAAA-------GAAAAACC--GAACACAACAGAAATA--AAG---------------AAA--A--AAAGGTTC------AGGC---------------AAAGAAGTG--GAAAAAGTGAGCGGCGGTGGAATTT-----------------------------------TTCAGT-------GCTGGCTGT---TATGTG------------GTGGCCAA-----GTGAAA--AA-GTCTTAATT----AAATA--AATAT------TAATCGGAAATTCTGCTTCGCGGAATAATAATAA--TACAA--AATAT------------------------------T-TT-TCGTTCT------------T--CTGTCCCACTCGCACCTT
droEle1 scf7180000491186:2473340-2473713 + ACTA-ATCAT-ACATAATA-AT------------------------------------ACGGCA-ATGTAAGTGTTTGATTA--T-TTTCACTTAAAAC--GGAGCC----------------AA---GTGT---------TTGTGTG----------CTTATGTG--------------------------T----TG-----------GCCT------------GCATGTT----------TATGTG-------GAAAAGTGAAAAT--GCTATTTGGGCCAAAA---TTGTATTGAAATTCTTA--GCAACAACCA-AC-----------------------------------GGCAAAAAAA-------------------TAAA----------------------AGACAA-------GAAAAACC--AAACAAAACAGAAAAA--CCA---------------A----A--CTAGGTTC------AGGC---------------AAAGAAGTG-GAAAAAAGTGAGCGGTGC--------------------------------------------------------------TGT---TATGTG------------GCGGCCAA-----GTGAAA--AAA-CCATAATT----AAATA--AATATTAATCTTAATCGGAA-TTCTGTTTCGCGGAATAATAAAA----------AATTCATTTAT---A--------------A-----ATT-TGGCTTAT------------T--TTGCCTCGCTCGCACTTT
droRho1 scf7180000776897:18565-18944 - ACTA-ATCAT-ACATAATC-ATACA---TTTTCGTG--GAGC--------AAAAACACACGGCA-ATGTAAATGTTTGATTA--T-TTTCATTTAAAAC--GGAGCC----------------AA---ACAA---------CAGTGTG----------TTTGAGAG-----------------------------------------------T------------GTGTGTT----------TGTGTG-------GAAAAGTGAAAAT--GCTATTTGGGCCAAAA---TTGTATTGAAATTCTTA--GCAACAACCA-AC---------------------------------GGGGAAAAAA-G----------------------------AA----------------GAAAA-------GAAAAACC--AAACAAAACAGAAAAA--CCG---------------A----A--CGAGGTTC------AGGC---------------AAAGACGTG-GAAAAAAGTGAGCGGTGC--------------------------------------------------------------TGT---TATGTG------------GTGGCCGA-----GTTAAA--AAA-CCATAATT----AAATA--AATAT------TAATCGAGAATTCTGTTTTGCGAAATAACACAA----------AATTCAATTAT---T-------------------AATT-TG----CC------------T--TTTTCTCGTTTGCATTAT
droFic1 scf7180000454076:170411-170810 - ACCA-ATCGC-ACATAATAAATACA---TTTTCGTG--GAGC--------TGAAAAACACGGCA-ATGTAAATGTTTGATTG--T-TTTCATTTAAAAC--GGAGCC----------------AAAC-ACAA---------CTGTTTG----------CAAGTGTGTGTG------T-------------------------------------------------------G----------TGTGTG-------GAAAAGTGAAAAT--GCTATTTGGGCCATAA---TCATATTGAAATTCTTA--GCAACAAGCA-ACGG--------CGAA--AA-AAT--------------------------TAAAAT-----AAAAG------AAGAA--------------------G-------GAAAAATC--AAACAAAACCGAGAAACCAC----------------A----ATTAAAGGTTC------AGGC---------------AAAGAAGTGGGGAAAAAGTGAGCGGCGCT--------------------------------------------------------------GTTATTATGC---------------GGCCAA-----GTGAAA--AA--TCTTAATT----AAATA--AATGT------TAATCGGAAATTCTGCTTCGTGGAATAATTAAA-AATATAAAT-------TTAT---G--------------A-----ATT-TGC--TCT------------CTGCCATCTCGCTCGCACTTT
droKik1 scf7180000302472:1817689-1818130 + ACCA-ACCAT-TC-CAATC-ATACATAATTTTCGTG--GAGG--------A-AAACACACGGCA-ATGTAAATGTTTGATTGT-T-TTTCATTTAAAAC--GGAGCT----------------AA---ACAATCGGGCCCCCTGTTT--------------G--------------TGTGTGCGT--------------------GC--TAG-T------------GTGTGTG----------TGTGTG-------GAAAAGTGAAAAT--GCTATTTGGGCCATAA---TTGTATCGAAATTCTTA--GCAACAA-CG----AA--CA-CC--AGCTCAAATT---------TTGTGGCAAAAAAA---------ATGTATAAAGAAAA----------------------C--------CACGGAAAAACCC-AAAGAAGA-AAAAATA--ACG---------------A----A--AAAGGTTC------AGGC---------------AAAGAAATG---AAAAAGTGAGCGGCGTG---------------------------------TTTCGATTTTTA-CTGCCTTT---TG-----------GCTGTCTTTCGTGTTGCGGTCGTTCTTCTTTCAG--AAA-CCATAATT----AAATAGAAATAT------TAATTGAAA-TTT---------------T-------------------------AACGAATTGGCG-----AAATTCGC--------TCT------------T--GCGTTTTGCCCTCTCGCT
droAna3 scaffold_12943:865338-865630 + ACTA-ATCGT-TCGTTATC--------------TAT--TAGT--------GAAAAAAGAAGTCG-ATGTAAATATTT-ATTG--T-TTTCATTTAAAAC--GGAGCC----------------AA---ACAA---------TTGTGTG----------TATGTGTGGTTG------CCTGCGCTG--------------------TGTGTGTGT------------GAGTGTT----------TGGCTG-------AAAAAGTGAAAAT--GCTATTTGGGCCATAA---TTGTATGAAAATTCTTA--GCAACAA-CA----AAGCCG-AC--ACCTCG-AC-AACAAATAATCGTGGCACAAAAATGTGAA------------A------AACAG----------------CAAATGAAA---------------------ACG-------------------------AAA--A--AAAGGTTC------AGGC--------AAAGG-CAAAGAAATG---AAAAAGTGAGCGGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396728:2263702-2264168 - ACTA-ATCGTGTCGTTATC-A-----------------------------------ACACATCG-ATGTAAATATTT-ATTG--T-TTTCATTTAAAAC--GGAGCC----C-----------AA---ACAA---------TTGTGTG----------TATGTGTGTGT-----------------------------------------------------------ATGTT----------TGGCTGAAAGAAAAAAAAGTGAAAAT--GCTATTTGGGCCATAA---TTGTATGAAAATTCTTA--GCAACAA-CA----AAGCCG-AC--ACCTCG-AC-AAGAAATAATCGTGGCACAAAAATGTGAA------------A------AACAG----------------CAAATGAAA---------------------ACG-------------------------AAAAAA--AAAGGTTCAAACGACCAAAAAAAAAAAAAGGACAAAGAAATG---AAAAAGTGAGCGGTGGCGGGCGCG----------------------TTTTTTTCGGTTGCGT-GTTCTTGTTGTTGGCTGT---TATGTG------------GCGTCCAA-----GTGGAA--A---CCCTAATT----AAATA----TAT------TAATTGAAAACTCTGCTCAGAGGAGTAATAAAAATATATATAT-------TTAT--TGAATT-GCAAACA---AGTTAC--------CCTCGTCTGTTATTTC--GCGTTCTGCTCTCTCGCT
dp5 4_group1:803855-804114 - TCTGCAATAT-CTGCAATC--------------C--AATAATAAGGGAAAATTCCCCCGTTGCA-ATGTA-ATATTTGAATA--T-TTTCATTTATGAT--TTCCCC----------------TAACAACAA---------CTGTTT-------------TGTGTTT----------------------------------------TGTG--T------------GTGTGTG----------TGTGCG-------AAGAAGTGAAAAT--GCTATTGAGGCCATAATATTTGTATTGAAATTCTTA--GCGGCGG-CC-ACAA-----------------AAT---------TCGTGGCAAAAGAT---------AC------------------AACAAAAATAA-----------------------------------------------------------------------------TTCGATTTCCCGCAAAGAAATGAACGA----------CGAAAAAAGTGAGCGGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_5:4407086-4407343 + TCTGCAATAT-CTGCAATC--------------C--AATAATAAGGGAAAATTCCCCCGTTGCA-ATGTA-ATATTTGAATA--T-TTTCATTTATGAT--TTCCCC----------------TAACAACAA---------CTGTTT-------------TGTGTTT----------------------------------------TG----T------------GTGTGTG----------TGTGCG-------AAGAAGTGAAAAT--GCTATTGAGGCCATAATATTTGTATTGAAATTCTTA--GCGGCGG-CC-ACAA-----------------AAT---------TCGTGGCAAAAGAT---------AC------------------AACAAAAATAA-----------------------------------------------------------------------------TTCGATTTCCCGCAAAGAAATGAACGA----------CGAAAAAAGTGAGCGGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004585:6991961-6992351 + TTTG-ATAAA-TGAAAAGG-AAATG---TGAAA-GA--GAGG--------AAAACCATATAATA-ATGTAATTAT-TGTTTATTGTTTTG-GTTAATAT----ATGT----------------AA---T--T---------CTGTGTTGTTAATTGTGTTTG--------------TGTGTGTAT--------------------GT-ATGTAT------------GATTGCG----------TTTGTG-------GAAAAGTGAAAATATGCAATATTAAGCA-AT---TTGTATTTAA-----------------------------------------------------------CAAAAAAG---AAAAGT-----AAAAG------AAAAG----------------AAAA--------TAAGAATACAGAGCACA---AAAAAA--GTGAGCCACGAGGCGCTTA----AGAGGAGGAAG------AAGC---------------AAACAAACAAAAAAAAAGTGAGCGGCATT------T-------------------------CCTTTTGTTGTTA-TTTCTATT--------------------------------------------------------TGTTTGAG---TTAATC--AACAT------T----------TTTTTTTCTTG---TGAC-------------------------GGAAAATT-GCACACA---A--TTT--------TCA------------T-ATGGTCTATGTTCTTGTTT
droVir3 scaffold_12723:2433955-2434177 - ATAA-ATTAT-TTGCATTA-AA---------------AGAGCTGCAAATAACATCCACGTTGCA-ATGTACATGATTTTATG--T-TTTAGTCTATT-----GTTCT----------------AA-AAACAA---------TTGTAA-----TAAGTGTTTGTGTGTGTG------TGTGTGTGC--------------------CTGGTACTTACTCGAAACAAAGCGTGTTT---GTGATGTGTGTG-------AAAAAGCCAAAAT--GCAATTTGGGCCAAAA---TCGTATTGAAATTCTGATAGCAACAA-CA----G--------CGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6500:15608811-15609122 - ATAT-------------AA-ATAAG---TTTCTGCA--AATA--------AATTACACGTTGCA-ATGTAAATGATTATGAG--T-TTTAATCAAAAGC--TATAAT----------------AA-AAAT-ATCA-AACTACTGTTTA----------TGTATGAGTGTG--AGAGTGTGTGTGT--------------------GTAGCG------------------TGTTTCGCGTTGTGTGTGTG-------AAAAAGTGAAAAT--GAAATTTGGGCCAAAA---TTGTATTTAAATTCTTA--ACGCCAA-CA-ACAG--------CGAA--CA-AGT---------TAGTTAAGAAATAA---------ATGTACA---TACG----------------------T--------GTT-ATATGAGC--CAGCC-----------------------------------------------------------------------A----AAGAA--AAAATA-------------------AATAAATAAAAAGTGAGCGGTTTG--T--------T------------------------CGCGCTGTGTT-----------GCGT-----GT-------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_15252:1881404-1881679 + ATAA-ATCAT-TTGCATTC-GTAA-----CGCTGAG--AGGC--------AAGAACACGTTGCA-ATGTAAATTCTTACAAG--T-TTTAATTGATAATAATTCAAGTAACAAAAATAGTGCCCATA-ACCA---------CTGTTTA----------CATGTGTGTGTG------TGTGTGTGAGCATGTGTTAATGTGCTTGTGCAGTG--T------------GTGTGCG----------TGTGTA-------AAAAAGTGAAAAT--GCAATTTGGGCCAAAA---TTGTATTGAAATTCTTA--ACAGCAA-CA-ACAG------CG--ACCGCA-AAT---------TCGTGGCAAAATTT---AAAAATTAGTTCCAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ACTA-ATCAT-ACATAATC-ATACA---TTTTCGTG--GAGC--------AAAAACACACGGCA-ATGTAAATGTTTGATTATAT-TTTCATTTAAAAC--GGAGCC----------------AA---ACAA---------CTGTGTA----------CTTGTGTGAGTG------TGTGTGCGT--------------------GCGGTGGCT------------GCGTGTT----------TGTGTG-------GAAAAGTGAAAAT--GCTATTTGGGCCATAA---TTGTATTGAAATTCTTA--GCAACAA-CA-ACAA--AC-CAA--ACCTCG-AGT---------TCGTGGCAAAAAAT---------AAGTTCAAAA-AAA----------------------A--------GAG-GAAAAACC--CAACC-----------------------------------------------------------------------AAAGGAAGTG---AAAAAGTGAGCGGCTCAGGGATTT-----------------------------------T------------------------TATGCTGTGCT-----------CCAA-----GTGAAATAAA-GTCTTTGGG----AAATT--ATTAT------TTATTGTAATTCCTTCACTGAGGAAACATACAA-AATAGAAAA-------------------------CAAAAAGATAA--------TCT------------C--CTGTCCCGCTCACACTTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTG---AAAAAGTGAGCGGCTCAG......................................................................................................................................................................................................................................................................2111.00100010000000000000
........................A---TTTTCGTG--GAGC--------AAAAACACACGGCA-AT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100010000000000000
.................................................................................................................................................................................................................................................................AAAAGTGAAAAT--GCTATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1821.00200002000000000000
......................................................................................................................................................................................................................................................................................GGGCCATAA---TTGTATTGAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000100000
...................................G--GAGC--------AAAAACACACGGCA-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000000000
.....................................................................................................................................................................GAGTG------TGTGTGCGT--------------------GCG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1760.17100000000001000000
.....................................................................................................................................................................................................................................................TGTG-------GAAAAGTGAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15170.06100000000001000000
droSec2
ACTA-ATCAT-ACATAATC-ATACA---TTTTCGTG--GAGC--------AAAAACACATGGCA-ATGTAAATGTTTGATTATAT-TTCCATTTAAAAC--GGAGCC----------------AA---ACAA---------CTGTGTA----------CTTGTGTGAGTG------TGTGTGCGT--------------------GCGGTGGCT------------GCGTGCT----------TGTGTG-------GAAAAGTGAAAAT--GCTATTTGGGCCATAA---TTGTATTGAAATTCTTA--GCAACAA-CA-ACAA--AC-CAA--ACCTCG-AGT---------TCGTGGCAAAAAAT---------AAGTTCAT--TAAA----------------------A--------GAC-GAAAAACC--CAACA-----------------------------------------------------------------------GAAGGAAGTG---AAAAAGTGAGCGGCTCAGAGATTT-----------------------------------T------------------------TATGCTGTGCT-----------CCAA-----GTGAAATAAA-GTCTTTGGG----AAATA--ATTAT------TTATTGTAATTCCTTCACTGAGGAAACATATAA-AATAGAAAA-------------------------CAAAAAGATCA--------TCT------------C--CTGTCCCGCTCACACTTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............TAATC-ATACA---TTTTCGTG--GAGC--------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
........................................................................................................................................................................TG------TGTGTGCGT--------------------GCGGTGGCT------------GCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001
..............................................................................................................................................TGTGTA----------CTTGTGTGAGTG------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
dm3
ACTA-ATCAT-ACATAATC-ATACA---TTTTCGTG--GAGC--------AAAAACACACGGCA-ATGTAAATGTTTGATTATAT-TTTCATTTAAAAC--GGAGCC----------------AA---ACAA---------CTGTGTA----------CTTGTGTGAGTG------TGTGTGCGT--------------------GCGGTGGCT------------GCGTGCT----------TGTGTG-------GAAAAGTGAAAAT--GCTATTTGGGCCATAA---TTGTATTGAAATTCTTA--GCAACAA-CA-ACAA--AC-CAA--ACCTCG-AGT---------TCGTGGCAAAAAAT---------AAGTTCGAAAAAAA----------------------A--------GAC-GAAAACCC--CAACA-----------------------------------------------------------------------AAAGGAAGTG---AAAAAGTGAGCGGCTCAGGGATTT--------------------------T--------T------------------------TATGCTGTGCT-----------CCAA-----GTGAAATAAA-GTCTTTGGG----AAATA--ATTAT------TTATTGTAATTCCTTCGCTGAGGAAACATACAA-AATAGAAAA-------------------------CAAAAAGATAA--------TCT------------C--CTGTCCCGCTCACACTTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................AAACCC--CAACA-----------------------------------------------------------------------AAAGGAAGTG---AA......................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--------TCT------------C--CTGTCCCGCTCACAC...2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------------------------------------------------------------------AAAGGAAGTG---AAAAAGTGAGCG............................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------TCT------------C--CTGTCCCGCTCACACT..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GTG--GAGC--------AAAAACACACGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAGATAA--------TCT------------C--CTGTCCCGCT........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGATAA--------TCT------------C--CTGTCCCGCTCACAC...2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................CA-ATGTAAATGTTTGATTAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........T-ACATAATC-ATACA---TTTTCGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA-----------------------------------------------------------------------AAAGGAAGTG---AAAAAGTGAGC.............................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---AAAAAGTGAGCGGCTCAGGG....................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TG------TGTGTGCGT--------------------GCGGTGGCT------------GC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---AAAAAGTGAGCGGCTCAGGGA...................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAATAAA-GTCTTTGGG----A............................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
......................................................................................................................................................................................................................................................................................................ATTGAAATTCTTA--GCAACAA-CA-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................TTTAAAAC--GGAGCC----------------AA---AC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTGCT-----------CCAA-----GTGAAA...............................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................TGTTTGATTATAT-TTTCATTTAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--------TCT------------C--CTGTCCCGCTCAC.....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................TTGTGTGAGTG------TGTGTGCGT--------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTT--------------------------T--------T------------------------TATGCTGTGCT-----------CCAA-----G....................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................TAAAAC--GGAGCC----------------AA---ACAA---------CTGTGTA----------CT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................CTGTGTA----------CTTGTGTGAGTG------TG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................TTTAAAAC--GGAGCC----------------AA---ACAA---------CT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.............ATAATC-ATACA---TTTTCGTG--GAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................GTG------TGTGTGCGT--------------------GCGGTGGCT------------GC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................................................................................TGGCT------------GCGTGCT----------TGTGTG-------GAAAAGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AC-GAAAACCC--CAACA-----------------------------------------------------------------------AAAGGA...............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATAA--------TCT------------C--CTGTCCCGCTCACA....2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-GTCTTTGGG----AAATA--ATT...................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TC-ATACA---TTTTCGTG--GAGT--------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------------------T--------T------------------------TATGCTGTGCT-----------CCAA-----GTG..................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................ATTTAAAAC--GGAGCC----------------AA---ACAA---------CTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................ATC-ATACA---TTTTCGTG--GAGC--------AAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................AAC--GGAGCC----------------AA---ACAA---------CTGTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................TTTCATTTAAAAC--GGAGCC----------------AA---ACAA---------CT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................A---TTTTCGTG--GAGC--------AAAAACACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................G------TGTGTGCGT--------------------GCGGTGGCT------------GCGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TACA---TTTTCGTG--GAGC--------AAAAACACACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................AACAA-CA-ACAA--AC-CAA--ACCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................TACA---TTTTCGTG--GAGC--------AAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TC-ATACA---TTTTCGTG--GAGC--------AAAAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TTCGTG--GAGC--------AAAAACACACGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--ATTAT------TTATTGTAATTCCTTC...........................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................GAGTG------TGTGTGCGT--------------------GCGGTGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.....................TACA---TTTTCGTG--GAGC--------AA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................AAAC--GGAGCC----------------AA---ACAA---------CTGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.......................................................CACACGGCA-ATGTAAATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAT------TTATTGTAATTCCTTC...........................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-----------------------------------------------------------------------AAAGGAAGTG---AAAAAGTGA...............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.................................................................................................................................................................................................................................................................................................................................................TCG-AGT---------TCGTGGCAAAATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................AAAAGTGAAAAT--GCTATTTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...................................................................................................................................................................................................................................................................................................................................................................................................AAA----------------------A--------GAC-GAAAACCC--CAACA-----------------------------------------------------------------------A....................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................GTGTGCGT--------------------GCGGTGGCT------------G.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GTG--GAGC--------AAAAACACACGGCA-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
........AT-ACATAATC-ATACA---TTTTCGTG--GAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................ACAA--AC-CAA--ACCTCG-AGT---------TCGTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................GTG--GAGC--------AAAAACACACGGCA-AT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................AA--ACCTCG-AGT---------TCGTGGCAAAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAA--------TCT------------C--CTGTCCCGCTCACACT..2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................GTG-------GAAAAGTGAAAAT--G....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1720.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATTCCTTCGCTGAGTT...................................................................................................1950.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................AATGTTTGATTATAT-TTTCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
droEre2
ACTA-ATCAT-ACATAATC-ATACA---TTTTCGTG--GAGC--------AAAAACACACGGCA-ATGTAAATGCTTGATTATAT-TTTCATTTAAAAC--GGAGCC----------------AA---ACAA---------CTGTGTA----------CTTGTGTGAGTG------TGTGTGCGT--------------------GCGGTGGCT------------GCGTGCT----------TGTGTG-------GAAAAGTGAAAAT--GCTATTTGGGCCATAA---TTGTATTGAAATTCTTA--GCAACAA-CA----AA--C-CAA--ACCTCG-AAT---------TCGTGGCAAAAAAGAATTAA------------A----------------AAAAATTCAAA--------AACGGAAAACCC-----------------------------------------------------C------AGA---------------AAAGGAAGGG--AAAAAAGTGAGCGGCTCAGGGATTT-----------------------------------T------------------------CATGCGGTGCT-----------CCAA-----GTGAAATAAT-GTCTTTGGG----AAATA--ATTAT------TAATTGCAATTCCTTCTCTGATGAAATGTACAA-GA-AGAAAA-------------------------CAGAGAGATAA--------TCC------------C--CTGTCCCGCTCACACTTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................................................................................................AAATTCTTA--GCAACAA-CA----AA--C-CAA--ACCTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTTTGGG----AAATA--ATTAT------TAATTGC....................................................................................................................2611.0010000010
..................C-ATACA---TTTTCGTG--GAGC--------AAAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAA--------TCC------------C--CTGTCCCGCTCACAC...2211.0011000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................AACCC-----------------------------------------------------C------AGA---------------AAAGGAAGGG--A........................................................................................................................................................................................................................................................................................2011.0010000100
.............................TTTCGTG--GAGC--------AAAAACACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
...................................................................................................................................................................................................................GCT------------GCGTGCT----------TGTGTG-------GAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
......................................................................................................................................................................................................................................GCT----------TGTGTG-------GAAAAGTGAAAAT--GC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
droYak3
ACTA-ATCAT-ACATAATC-ATACA---TTTTCGTG--GAGC--------AAAAACACACGGCA-ATGTAAATGTTTGATTATAT-TTTCATTTAAAAC--GGAGCC----------------AA---ACCA---------CTGTGTA----------CTTGTGTGAGTGCGAGTGTGTGTGCGT--------------------GCGGTGGCT------------GCGTGTT----------TGTGTG-------GAAAAGTGAAAAT--GCTATTTGGGCCATAA---TTGTATTGAAATTCTTA--GCAACAA-CA----AA--C-CAA--ACCTCG-AAT---------TCGTGGCAAAAAAT---------ATGTTCA---TAAA----------------------A--------GGC-AAAAAACC--CAACC-----------------------------------------------------------------------C----AAGTG--AAAAAAGTGAGCGGTTTGGGAATTA-----------------------------------C------------------------CATGCGGTGAT-----------CCAA-----GTGAATTAAA-GTCTTTGGG----AAATA--ATTAA------TAATTGTACAT-------------------CAA-AAAAGAAAAAACCCA--------------------AGAAAGATAA--------CCT------------C--CTGTCCCGCTCACACTTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGAGCGGTTTGGGAATTA-----------------------------------C------------------------CATGC...............................................................................................................................................................................................2811.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTG--AAAAAAGTGAGCGGT..........................................................................................................................................................................................................................................................................1811.00100000010000
........................A---TTTTCGTG--GAGC--------AAAAACACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATAA--------CCT------------C--CTGTCCCGCT........2011.00101000000000
........................A---TTTTCGTG--GAGC--------AAAAACACACGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTG--AAAAAAGTGAGCGGTTTGGG.....................................................................................................................................................................................................................................................................2311.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAT-----------CCAA-----GTGAATTAAA-GTCTTT....................................................................................................................................................2311.00101000000000
.........................................................................................................................................................................GCGAGTGTGTGTGCGT--------------------GCGGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGATAA--------CCT------------C--CTGTCCCGCT........2211.00100100000000
............................................................................................................................................................................AGTGTGTGTGCGT--------------------GCGGTGGCT------------GC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
...................................G--GAGC--------AAAAACACACGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50101000000000
droEug1
ACTA-ATCAT-ACATAATC-ATACA---TTTTCGTG--GAGC--------AAAAACACACGGCAAATGTAAATGTTTGATTA--T-TTTCATTTAAAAC--GGAGCC----------------AA---ACAA---------CTGTTTA----------TGTGTATGTGTG------TGAGTGCCT--ATGTGT----TG-TGT--GAGCTGGCT------------GCGTGTT----------TGTGTG-------GAAAAGTGAAAAT--GCTATTTGGGCCATAA---TTGTATTGAAATTCTTA--GCAACAA-CA----A--TCG-GC--ACCTCA-AAT---------TCGTGGCAAAAAAAAT-TAAAAT-----TAAAG------AAGAG----------------GAAAC-------GA--AATCG-AAACAAAACAGAAACA--ACG---------------A----A--AAAGGTTC------AGGC---------------AAAGATGTG-AAAAAAAGTGAGCGGCGATGGGATTT-----------------------------------TTATGT-------GGTTGCTGT---TATGTG------------GTGACCAA-----GTGAAA--AAGCTCTTAACTACATAAATA--AATAT------TA----TTATTC---------GATATTAT-------------------------AAAAAAAG-GC----------ATTT--------TCT------------T--CTATCTCGCTCGAACTTGSizeHit CountTotal NormTotal
No Reads
droBia1
ACTA-ATCAT-ACATAATC-ATACA---TTTTCGTG--GCGA--------AAACACACACGGCA-ATGTAAATGTTTGATTA--T-TTTCATTTAAAAC--GGAGCC----------------AA---ACAA---------CTGTGTA----------AGTGAGTGTGTG----TGTGTGTGTGT--------------------GCGCTGGCT------------GCGTGTT----------TGTGTG-------GAAAAGTGAAAAG--GCTATTTGGGCCATAA---TTGTATTGAAATTCTAA--GCAACAA-CA----AA-ACA-AC--ACCTCG-AAT---------TGGTGGCAAAAAAC---AAAA-----TTCAAAG------AAAAG----------------GAAAA-------GAAGAACC--GAACAAAACAGAAG-------------------------------------C------AGGC---------------AAAGAAGTG---GAAAAGTGAGCGGCGGTGCGATTT-----------------------------------T------------------------TCTGTG------------TTGGCCAA-----GTGGAA--AAGGTCTTAATT----GAGTA--AATAT------TAATCGGAAATTCGGCTTTGCGGAATAGTAACGA-AAATA---AATTC------------------------------A-CT-----TCG------------T--TCGTCTCCCTCGCACTCTSizeHit CountTotal NormTotal
No Reads
droTak1
ACTA-ATCAT-ACATAATC-ATACA---TTTTCGTG--GGGC--------AAAAACACACGGCA-ATGTAAATGTTTGATTA--T-TTTCATTTAAAAC--GGAGCC----------------AA---ACAA---------CTGTGAA----------TGTGAGTGTGTG------TGTGAGCTT--GTGTGT------------TTGCTGGCT------------GCGTGTT----------TGTGTG-------GAAAAGTGAAAAT--GCTATTTGGGCCATAA---TTGTATTGAAATTCTTA--GCAACAA-CAAACAA--ACG-GC--ACCTCG-AAA---------TCGTGGCAAAAAAT---AAAAAT-----TAAAGGAAGCGAAGAA----------------GAAAA-------GAAAAACC--GAACACAACAGAAATA--AAG---------------AAA--A--AAAGGTTC------AGGC---------------AAAGAAGTG--GAAAAAGTGAGCGGCGGTGGAATTT-----------------------------------TTCAGT-------GCTGGCTGT---TATGTG------------GTGGCCAA-----GTGAAA--AA-GTCTTAATT----AAATA--AATAT------TAATCGGAAATTCTGCTTCGCGGAATAATAATAA--TACAA--AATAT------------------------------T-TT-TCGTTCT------------T--CTGTCCCACTCGCACCTTSizeHit CountTotal NormTotal
No Reads
droEle1
ACTA-ATCAT-ACATAATA-AT------------------------------------ACGGCA-ATGTAAGTGTTTGATTA--T-TTTCACTTAAAAC--GGAGCC----------------AA---GTGT---------TTGTGTG----------CTTATGTG--------------------------T----TG-----------GCCT------------GCATGTT----------TATGTG-------GAAAAGTGAAAAT--GCTATTTGGGCCAAAA---TTGTATTGAAATTCTTA--GCAACAACCA-AC-----------------------------------GGCAAAAAAA-------------------TAAA----------------------AGACAA-------GAAAAACC--AAACAAAACAGAAAAA--CCA---------------A----A--CTAGGTTC------AGGC---------------AAAGAAGTG-GAAAAAAGTGAGCGGTGC--------------------------------------------------------------TGT---TATGTG------------GCGGCCAA-----GTGAAA--AAA-CCATAATT----AAATA--AATATTAATCTTAATCGGAA-TTCTGTTTCGCGGAATAATAAAA----------AATTCATTTAT---A--------------A-----ATT-TGGCTTAT------------T--TTGCCTCGCTCGCACTTTSizeHit CountTotal NormTotal
No Reads
droRho1
ACTA-ATCAT-ACATAATC-ATACA---TTTTCGTG--GAGC--------AAAAACACACGGCA-ATGTAAATGTTTGATTA--T-TTTCATTTAAAAC--GGAGCC----------------AA---ACAA---------CAGTGTG----------TTTGAGAG-----------------------------------------------T------------GTGTGTT----------TGTGTG-------GAAAAGTGAAAAT--GCTATTTGGGCCAAAA---TTGTATTGAAATTCTTA--GCAACAACCA-AC---------------------------------GGGGAAAAAA-G----------------------------AA----------------GAAAA-------GAAAAACC--AAACAAAACAGAAAAA--CCG---------------A----A--CGAGGTTC------AGGC---------------AAAGACGTG-GAAAAAAGTGAGCGGTGC--------------------------------------------------------------TGT---TATGTG------------GTGGCCGA-----GTTAAA--AAA-CCATAATT----AAATA--AATAT------TAATCGAGAATTCTGTTTTGCGAAATAACACAA----------AATTCAATTAT---T-------------------AATT-TG----CC------------T--TTTTCTCGTTTGCATTATSizeHit CountTotal NormTotal
No Reads
droFic1
ACCA-ATCGC-ACATAATAAATACA---TTTTCGTG--GAGC--------TGAAAAACACGGCA-ATGTAAATGTTTGATTG--T-TTTCATTTAAAAC--GGAGCC----------------AAAC-ACAA---------CTGTTTG----------CAAGTGTGTGTG------T-------------------------------------------------------G----------TGTGTG-------GAAAAGTGAAAAT--GCTATTTGGGCCATAA---TCATATTGAAATTCTTA--GCAACAAGCA-ACGG--------CGAA--AA-AAT--------------------------TAAAAT-----AAAAG------AAGAA--------------------G-------GAAAAATC--AAACAAAACCGAGAAACCAC----------------A----ATTAAAGGTTC------AGGC---------------AAAGAAGTGGGGAAAAAGTGAGCGGCGCT--------------------------------------------------------------GTTATTATGC---------------GGCCAA-----GTGAAA--AA--TCTTAATT----AAATA--AATGT------TAATCGGAAATTCTGCTTCGTGGAATAATTAAA-AATATAAAT-------TTAT---G--------------A-----ATT-TGC--TCT------------CTGCCATCTCGCTCGCACTTTSizeHit CountTotal NormTotal
No Reads
droKik1
ACCA-ACCAT-TC-CAATC-ATACATAATTTTCGTG--GAGG--------A-AAACACACGGCA-ATGTAAATGTTTGATTGT-T-TTTCATTTAAAAC--GGAGCT----------------AA---ACAATCGGGCCCCCTGTTT--------------G--------------TGTGTGCGT--------------------GC--TAG-T------------GTGTGTG----------TGTGTG-------GAAAAGTGAAAAT--GCTATTTGGGCCATAA---TTGTATCGAAATTCTTA--GCAACAA-CG----AA--CA-CC--AGCTCAAATT---------TTGTGGCAAAAAAA---------ATGTATAAAGAAAA----------------------C--------CACGGAAAAACCC-AAAGAAGA-AAAAATA--ACG---------------A----A--AAAGGTTC------AGGC---------------AAAGAAATG---AAAAAGTGAGCGGCGTG---------------------------------TTTCGATTTTTA-CTGCCTTT---TG-----------GCTGTCTTTCGTGTTGCGGTCGTTCTTCTTTCAG--AAA-CCATAATT----AAATAGAAATAT------TAATTGAAA-TTT---------------T-------------------------AACGAATTGGCG-----AAATTCGC--------TCT------------T--GCGTTTTGCCCTCTCGCTSizeHit CountTotal NormTotal
No Reads
droAna3
ACTA-ATCGT-TCGTTATC--------------TAT--TAGT--------GAAAAAAGAAGTCG-ATGTAAATATTT-ATTG--T-TTTCATTTAAAAC--GGAGCC----------------AA---ACAA---------TTGTGTG----------TATGTGTGGTTG------CCTGCGCTG--------------------TGTGTGTGT------------GAGTGTT----------TGGCTG-------AAAAAGTGAAAAT--GCTATTTGGGCCATAA---TTGTATGAAAATTCTTA--GCAACAA-CA----AAGCCG-AC--ACCTCG-AC-AACAAATAATCGTGGCACAAAAATGTGAA------------A------AACAG----------------CAAATGAAA---------------------ACG-------------------------AAA--A--AAAGGTTC------AGGC--------AAAGG-CAAAGAAATG---AAAAAGTGAGCGGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................GTGTGGTTG------CCTGCGCTG--------------------TG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..................................................................................................................................AA---------TTGTGTG----------TATGTGTGGTTG------CCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
............................................................................................TTAAAAC--GGAGCC----------------AA---ACAA---------TTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.................................................................................................................................................................GTGTGGTTG------CCTGCGCTG--------------------TGTGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..............................................................................................................................................................................................................................................................................................................................................................TAATCGTGGCACAAAAATGTGAA------------A------AACA........................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000010
droBip1
ACTA-ATCGTGTCGTTATC-A-----------------------------------ACACATCG-ATGTAAATATTT-ATTG--T-TTTCATTTAAAAC--GGAGCC----C-----------AA---ACAA---------TTGTGTG----------TATGTGTGTGT-----------------------------------------------------------ATGTT----------TGGCTGAAAGAAAAAAAAGTGAAAAT--GCTATTTGGGCCATAA---TTGTATGAAAATTCTTA--GCAACAA-CA----AAGCCG-AC--ACCTCG-AC-AAGAAATAATCGTGGCACAAAAATGTGAA------------A------AACAG----------------CAAATGAAA---------------------ACG-------------------------AAAAAA--AAAGGTTCAAACGACCAAAAAAAAAAAAAGGACAAAGAAATG---AAAAAGTGAGCGGTGGCGGGCGCG----------------------TTTTTTTCGGTTGCGT-GTTCTTGTTGTTGGCTGT---TATGTG------------GCGTCCAA-----GTGGAA--A---CCCTAATT----AAATA----TAT------TAATTGAAAACTCTGCTCAGAGGAGTAATAAAAATATATATAT-------TTAT--TGAATT-GCAAACA---AGTTAC--------CCTCGTCTGTTATTTC--GCGTTCTGCTCTCTCGCTSizeHit CountTotal NormTotal
No Reads
dp5
TCTGCAATAT-CTGCAATC--------------C--AATAATAAGGGAAAATTCCCCCGTTGCA-ATGTA-ATATTTGAATA--T-TTTCATTTATGAT--TTCCCC----------------TAACAACAA---------CTGTTT-------------TGTGTTT----------------------------------------TGTG--T------------GTGTGTG----------TGTGCG-------AAGAAGTGAAAAT--GCTATTGAGGCCATAATATTTGTATTGAAATTCTTA--GCGGCGG-CC-ACAA-----------------AAT---------TCGTGGCAAAAGAT---------AC------------------AACAAAAATAA-----------------------------------------------------------------------------TTCGATTTCCCGCAAAGAAATGAACGA----------CGAAAAAAGTGAGCGGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAACGA----------CGAAAAAAGTGAGCGGC..........................................................................................................................................................................................................................................................................2611.0010000000001
.................................................................................................................................................................................................................................................................................................TTTGTATTGAAATTCTTA--GCGGCGG-G......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000010
..................................................................................................................................................................................................................................................................................................TTGTATTGAAATTCTTA--GCGGCGG-C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACGA----------CGAAAAAAGTGAGC.............................................................................................................................................................................................................................................................................2011.0010100000000
...............................................................................................TGAT--TTCCCC----------------TAACAACAA---------CT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATTTCCCGCAAAGAAAT...........................................................................................................................................................................................................................................................................................................2011.0010010000000
droPer2
TCTGCAATAT-CTGCAATC--------------C--AATAATAAGGGAAAATTCCCCCGTTGCA-ATGTA-ATATTTGAATA--T-TTTCATTTATGAT--TTCCCC----------------TAACAACAA---------CTGTTT-------------TGTGTTT----------------------------------------TG----T------------GTGTGTG----------TGTGCG-------AAGAAGTGAAAAT--GCTATTGAGGCCATAATATTTGTATTGAAATTCTTA--GCGGCGG-CC-ACAA-----------------AAT---------TCGTGGCAAAAGAT---------AC------------------AACAAAAATAA-----------------------------------------------------------------------------TTCGATTTCCCGCAAAGAAATGAACGA----------CGAAAAAAGTGAGCGGCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................GTGTGTG----------TGTGCG-------AAGAAGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
...............................................................................................................................................GTTT-------------TGTGTTT----------------------------------------TG----T------------GTGTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.672000002
droWil2
TTTG-ATAAA-TGAAAAGG-AAATG---TGAAA-GA--GAGG--------AAAACCATATAATA-ATGTAATTAT-TGTTTATTGTTTTG-GTTAATAT----ATGT----------------AA---T--T---------CTGTGTTGTTAATTGTGTTTG--------------TGTGTGTAT--------------------GT-ATGTAT------------GATTGCG----------TTTGTG-------GAAAAGTGAAAATATGCAATATTAAGCA-AT---TTGTATTTAA-----------------------------------------------------------CAAAAAAG---AAAAGT-----AAAAG------AAAAG----------------AAAA--------TAAGAATACAGAGCACA---AAAAAA--GTGAGCCACGAGGCGCTTA----AGAGGAGGAAG------AAGC---------------AAACAAACAAAAAAAAAGTGAGCGGCATT------T-------------------------CCTTTTGTTGTTA-TTTCTATT--------------------------------------------------------TGTTTGAG---TTAATC--AACAT------T----------TTTTTTTCTTG---TGAC-------------------------GGAAAATT-GCACACA---A--TTT--------TCA------------T-ATGGTCTATGTTCTTGTTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............GAAAAGG-AAATG---TGAAA-GA--GA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGAGCACA---AAAAAA--GTG............................................................................................................................................................................................................................................................................................................................................................1911.00100010
........................................................................................................................................................................................................................................G----------TTTGTG-------GAAAAGTGAAAATAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCCACGAGGCGCTTA----AGAGGAG.................................................................................................................................................................................................................................................................................................................................2411.00100100
................................................................................................................................................................................................................................................................................................................................................................................................................................A--------TAAGAATACAGAGCACA---AA.....................................................................................................................................................................................................................................................................................................................................................................2011.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................AA--------TAAGAATACAGAGCACA---AAA....................................................................................................................................................................................................................................................................................................................................................................2211.00100100
.....................AATG---TGAAA-GA--GAGG--------AAAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
........................G---TGAAA-GA--GAGG--------AAAACCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
..................................................................................................................................................................................................................................GATTGCG----------TTTGTG-------GAAAAGTGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
...................................................................................................................................................................................GTGTAT--------------------GT-ATGTAT------------GATTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
.......AAA-TGAAAAGG-AAATG---TGAAA-GA--GA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
.......AAA-TGAAAAGG-AAATG---TGAAA-GA--GAGG--------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
...................................................................GTAATTAT-TGTTTATTGTTTTG-G........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.................................................................................................................................................................................................................TGTAT------------GATTGCG----------TTTGTG-------GAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
...................................................................................................................................................................................................................................ATTGCG----------TTTGTG-------GAAAAGTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.............................................................................................................................................................GTTTG--------------TGTGTGTAT--------------------GT-ATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1960.17100010
droVir3
ATAA-ATTAT-TTGCATTA-AA---------------AGAGCTGCAAATAACATCCACGTTGCA-ATGTACATGATTTTATG--T-TTTAGTCTATT-----GTTCT----------------AA-AAACAA---------TTGTAA-----TAAGTGTTTGTGTGTGTG------TGTGTGTGC--------------------CTGGTACTTACTCGAAACAAAGCGTGTTT---GTGATGTGTGTG-------AAAAAGCCAAAAT--GCAATTTGGGCCAAAA---TCGTATTGAAATTCTGATAGCAACAA-CA----G--------CGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................TTTAGTCTATT-----GTTCT----------------AA-AAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
................................................................................................................................................................................................................GTACTTACTCGAAACAAAGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000001000000000000000000000000000000000000000000
...............................................................................................................................................GTAA-----TAAGTGTTTGTGTGTGTG------TG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000010000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AATTCTGATAGCAACAA-CA----G--------C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................ATTGAAATTCTGATAGCAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..................A-AA---------------AGAGCTGCAAATAACATCCACGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000001000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................GAAATTCTGATAGCAACAA-CA----G--------C.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
........AT-TTGCATTA-AA---------------AGAGCTGCAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................GTGTTT---GTGATGTGTGTG-------AAAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................ACAAAGCGTGTTT---GTGATGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000100000000000000000000000
droMoj3
ATAT-------------AA-ATAAG---TTTCTGCA--AATA--------AATTACACGTTGCA-ATGTAAATGATTATGAG--T-TTTAATCAAAAGC--TATAAT----------------AA-AAAT-ATCA-AACTACTGTTTA----------TGTATGAGTGTG--AGAGTGTGTGTGT--------------------GTAGCG------------------TGTTTCGCGTTGTGTGTGTG-------AAAAAGTGAAAAT--GAAATTTGGGCCAAAA---TTGTATTTAAATTCTTA--ACGCCAA-CA-ACAG--------CGAA--CA-AGT---------TAGTTAAGAAATAA---------ATGTACA---TACG----------------------T--------GTT-ATATGAGC--CAGCC-----------------------------------------------------------------------A----AAGAA--AAAATA-------------------AATAAATAAAAAGTGAGCGGTTTG--T--------T------------------------CGCGCTGTGTT-----------GCGT-----GT-------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................................................................................................................GAAATTTGGGCCAAAA---TTGTATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
...............................................................................................................................................................................................................AGCG------------------TGTTTCGCGTTGTGTGTGTG-------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
droGri2
ATAA-ATCAT-TTGCATTC-GTAA-----CGCTGAG--AGGC--------AAGAACACGTTGCA-ATGTAAATTCTTACAAG--T-TTTAATTGATAATAATTCAAGTAACAAAAATAGTGCCCATA-ACCA---------CTGTTTA----------CATGTGTGTGTG------TGTGTGTGAGCATGTGTTAATGTGCTTGTGCAGTG--T------------GTGTGCG----------TGTGTA-------AAAAAGTGAAAAT--GCAATTTGGGCCAAAA---TTGTATTGAAATTCTTA--ACAGCAA-CA-ACAG------CG--ACCGCA-AAT---------TCGTGGCAAAATTT---AAAAATTAGTTCCAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..................................................................................................................................................................................................................................................................................................................A--ACAGCAA-CA-ACAG------CG--ACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
..............................GCTGAG--AGGC--------AAGAACACGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
...............................................................................................................................................................................................................AGTG--T------------GTGTGCG----------TGTGTA-------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18110.09110

Generated: 05/19/2015 at 02:13 AM