ID:

dsi_5436

 Coordinate:

2r:10518865-10519014 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-2.8 -1.9

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
(TTTTTG)nSimple_repeatSimple_repeat+

Sense Strand Reads

GGGAGATCATCTGGTACATACCTTACTTTAAAAATCAACCAAAATGCCGGGTAATTAATCAATAAAATACATATTATTAGTTCTAATCTAAGAGGAGTAAACAAAAACAAAAAGAAAAACAAAAATACATCAACATTATGAATAAAGAAAATAAGCAACGTGAGCAACGTAATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAAGAAGGCAAAACAAAATCAAGTTTAATGAC
****************************************************************************************.....................................................................((((.....)))).........*********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M053
female body
 M024
male body		 SRR618934
dsim w501 ovaries
 SRR902008
ovaries
 SRR553487
NRT_0-2 hours eggs
 M025
embryo
 SRR553488
RT_0-2 hours eggs
 M023
head
 GSM343915
embryo
 SRR902009
testis
.......................................................................................................................................................TAAGCAACGTGAGCAACGTAATATGGGA....................................................................... 28 0 1 14.00 14 6 8 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TATGGGAAATCTGTAACTTTGGTGATC................................................... 27 0 1 9.00 9 6 3 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TGGGAAATCTGTAACTTTGGTGATC................................................... 25 0 1 4.00 4 2 1 0 0 1 0 0 0 0 0 0 0
..GAGATGATCTGGTAGATA...................................................................................................................................................................................................................................... 18 2 2 3.50 7 0 0 0 4 0 0 0 0 0 3 0 0
...........................................................................................................................................................................ATATGGGAAATCTGTAACTTTGGTGA..................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TATGGGAAATCTGTAACTTTGGTGA..................................................... 25 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................TAATATGGGAAATCTGTAACTTTGGTGATC................................................... 30 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................AGCAACGTGAGCAACGTAATATGGGA....................................................................... 26 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
.......................TACTTTAAAAATCAACCAAAATGCCGGG....................................................................................................................................................................................................... 28 0 1 2.00 2 0 1 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................TAAGCAACGTGAGCAACGTAATATGGGAA...................................................................... 29 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.......................................................................................................................................................................................................TTTTTAAATGTTATTAGTAAAAGAAGGC....................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................TCTGTAACTTTGGTGATCTTTTTAAA........................................... 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................TATGAATAAAGAAAATAAGCAACGTGA....................................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
....................................................AATTAATCAATAAAATACGTATTATTA........................................................................................................................................................................... 27 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
........................ACTTTAAAAATCAACCAAAATGCC.......................................................................................................................................................................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................AAATAAGCAACGTGAGCAACGT................................................................................ 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................ATCTGTAACTTTGGTGATCTTTTT.............................................. 24 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
........................................................................................TAAGAGGAGTAAACAAAAAC.............................................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................ACATCAACATTATGAATAAAGAAAATAAGC.............................................................................................. 30 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................TACATATTATTAGTTCTAATCTAAGAGGA.......................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................ATCTGTAACTTTGGTGATCTTT................................................ 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
............................................................................................................................ATACATCAACATTATGAATAAAGA...................................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................TCTAATCTAAGAGGAGTAAACAAAAACA............................................................................................................................................. 28 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................................................................................................................................................GAAGGCAAAACAAAATCAAGT........ 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TATGGGAAATCTGTAACTTTGGTGAT.................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
...........................TTAAAAATCAACCAAAATGCCGGGTAAT................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................ATGGGAAATCTGTAACTTTGGTGATC................................................... 26 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
..............................................CCGGGTAATTAATCAATAA......................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................CTAAGAGGAGTAAACAAAAACAAAAAGAA...................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................TTAGTAAAAGAAGGCAAAACAAAATC............ 26 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................................AAATGCCGGGTAATTAATCA............................................................................................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................TACATATTATTAGTTCTAATCTAAGA............................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................TACATCAACATTATGAATAAAGAAAATAA................................................................................................ 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................ATATGGGAAATCTGTAACTTTGGT....................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................AATCTGTAACTTTGGTGATCT.................................................. 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................AATATGGGAAATCTGTAACT............................................................ 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................................ATATGGGAAATCTGTAACT............................................................ 19 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................................................................................GAGCAACGTAATATGGGAAATCTGTAAC............................................................. 28 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................TATGGGAAATCTGTAACTTTGGTGATCT.................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................AAGGAAAACAAAAATACATCAACATTAA............................................................................................................... 28 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................AAAAGAAGGCAAAACAAAATCAAGTT....... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..GAGATGATCTGGTAGATAG..................................................................................................................................................................................................................................... 19 3 16 0.94 15 0 0 0 12 0 0 0 0 0 3 0 0
...........................................................................................................................................................................................TCTTTGGTGATCTTTTTAGGTG......................................... 22 3 3 0.33 1 0 0 0 0 0 0 0 0 0 0 1 0
GAGAGATGATCTGGTAGATA...................................................................................................................................................................................................................................... 20 3 7 0.29 2 0 0 0 2 0 0 0 0 0 0 0 0
.....................................................................................................................................................AATAGGCAACGTGAGC..................................................................................... 16 1 4 0.25 1 0 0 0 0 0 0 1 0 0 0 0 0
...................................................................................................AAAAAAAACAAAAAGAAAAACAA................................................................................................................................ 23 1 7 0.14 1 0 0 0 0 0 0 0 0 0 0 0 1
...............................................................................................................................................................................................................................AGGCAAAACAAAATC............ 15 0 8 0.13 1 0 0 0 0 1 0 0 0 0 0 0 0
........................................................................................................................................................................GTAAGATGGGAACTCTG................................................................. 17 2 14 0.07 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................AAGAGGACTTAAAAAAAACAAA........................................................................................................................................... 22 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1 0 0

Anti-sense strand reads

CCCTCTAGTAGACCATGTATGGAATGAAATTTTTAGTTGGTTTTACGGCCCATTAATTAGTTATTTTATGTATAATAATCAAGATTAGATTCTCCTCATTTGTTTTTGTTTTTCTTTTTGTTTTTATGTAGTTGTAATACTTATTTCTTTTATTCGTTGCACTCGTTGCATTATACCCTTTAGACATTGAAACCACTAGAAAAATTTACAATAATCATTTTCTTCCGTTTTGTTTTAGTTCAAATTACTG
***********************************************************************.....................................................................((((.....)))).........**************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 O001
Testis
 SRR553488
RT_0-2 hours eggs
................................................CCCATTAATTAGTGATTG........................................................................................................................................................................................ 18 2 11 3.45 38 25 11 2 0 0 0
...............................................GCCCATTAATTAGTGATTG........................................................................................................................................................................................ 19 2 2 1.00 2 1 0 1 0 0 0
....................................................TTAATTAGTTATTTTATG.................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0
...........................................................................................................................................................................................TGAAACCACTAGAAAAATTTACAATAAT................................... 28 0 1 1.00 1 0 0 0 1 0 0
...............................................GCCCATTAATTAGTGATT......................................................................................................................................................................................... 18 1 1 1.00 1 1 0 0 0 0 0
..............................................GGCCCATTAATTAGTGATTG........................................................................................................................................................................................ 20 2 2 0.50 1 1 0 0 0 0 0
..............................................TGCCCATTAATTAGTGATTG........................................................................................................................................................................................ 20 3 5 0.40 2 1 1 0 0 0 0
..............................................TGCCCATTAATTAGTGATT......................................................................................................................................................................................... 19 2 3 0.33 1 0 0 1 0 0 0
.....................................................................................................................................................................................................................ATCATTTGCTTCAGTATTGTTT............... 22 3 7 0.14 1 0 0 0 0 0 1
CCCTCTAGTTGACCA........................................................................................................................................................................................................................................... 15 1 13 0.08 1 0 0 0 1 0 0
.............................................ATGCCCATTAATTAGTGATT......................................................................................................................................................................................... 20 3 14 0.07 1 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:10518815-10519064 - dsi_5436 GGGAGA----------------------------------------------------TC---AT--------CTGGT------------ACATAC---------------------------------------C-------TTACTTTA-AA--------------------A--AT---CAACCAAAATGCCGGGTAATTAATCAATA----AAATACAT--ATTATTAGTTCTAAT--CTAAGAG-GAGTAAACAAA-A-ACAA------------------AAAGAAAAACAAAAA-----------TACATCAACATTATGA------------------------------------------------------------------------ATAA--AG-----A------------AA----ATAAGC--AACGTGAGCAACGTA--ATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAAGAAGGCAAAA---------------------CA-----AAATCAAGTT---------------------TAATGAC
droSec2 scaffold_239:1678-1916 - GGGAGA----------------------------------------------------TC---AT--------CTGGT------------ACATAC---------------------------------------C-------TTACTTTA-AA--------------------A--AT---CAACCAAAATGCCGGGTAATTAATCAATA----AAATACAT--ATTATTAGTTCTAAT--CTAAGAG-AAGTAAAGAAA-A-------------------------------ACAAAAA-----------TACATCAACATTATGA------------------------------------------------------------------------ATAA--AG-----A-----------AAA----ACAAGC--AACGTGAGCAACGTA--ATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAAGAAGGCAAAA---------------------CA-----AAATCAAGTT---------------------TAATGAC
dm3 chr2R:9831338-9831598 - GGGAGA----------------------------------------------------TC---AT--------CTGGT------------ACATAC---------------------------------------C-------TTACTTTA-AA--------------------A--AT---CAACCAAAATGCCGGGTAATTAATCAATA----AAATACAT--ATTATTAGTTCTAAT--CTAAGAG-GAGTAAACAAA-A-ACAAAAC-------AAAAACAA-AAGGAAAACAAAAA-----------TACATCAACATTATGA------------------------------------------------------------------------ATAA--AG-----A-----------AAA----ATAAGC--AACGTGAGCAACGTA--ATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAAGAAGGCAAAA---------------------CA-----AAATCAAGTT---------------------TAATGAC
droEre2 scaffold_4845:15990533-15990780 + GGGAGA----------------------------------------------------TC---AT--------CTGGT------------ACATAC---------------------------------------C-------TTACTTTA-A---------------------A--AT---CAACCAAAATGCCGGGTAATTAATCAATA----AAATACAT--ATTATTAGTTCTAAT--CTAAGAG-GAGTAAACAAA-A-ACAA------------------AAACG-AAACAAAAA-----------TACATCAACAATATGA-------------------------------------------------------------------------TAA--AG-----A-----------AAA----TTAAGC--AACGTGAGCAACGTA--AAATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAGGAAAGCAAAA---------------------CA-----AAATCAAGTT---------------------TAATGAC
droYak3 2R:7124212-7124464 + GGGAGA----------------------------------------------------TCATGATGCATCTATCTGGT------------ACATAC---------------------------------------C-------TTACTTTA-AA--------------------A--AT---CAACCAAAATGCCGGGTAATTAATCAATA----AAATACAT--ATTATTAGTTCTAAT--CTAAGAG-GAGTAAACAAA-A-A------------------------------CAAAAA-----------TACATCAACATTATGATAA-------------------------------------------------AA--------------------AA--AG-----G-----------AAA----TTAAGC--AACGTGAGCAACGTA--ATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAAGAATGCAAAA---------------------CA-----AAATCAAGTT---------------------TAATGAC
droEug1 scf7180000409462:3014825-3015108 + AAGAGA----------------------------------------------------TC---AT--------CTGGT------------ACATCC---------------------------------------C-------TTACTTTA-ATAAAAACAAAAACGAAAACTAGAAAC---CAACCAAAATGCCGGGTAATTAATCAATA----AAATACAT--ATTATTAGTTCTAAT--CTAAGCG-GAGAAAGCAA-AA-------------------------------------------------TACATCAACATAATGATAATG-ATAAAGA-AAAT----------------------GAAAGAAAGTAA----------------------AA--TG-----A-----------AAA----ATAAGC--AACGTGAGCAACGTA--ATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAAAAAA---AAA-----------CAA----AAACA----AAAATCAAGTT---------------------TAATGAC
droBia1 scf7180000302291:296442-296664 + AAGAGA----------------------------------------------------TA---AT--------CTGGT------------ACATCC---------------------------------------C-------TTACTTTA-AA--------------------A--AACAACAACCAAAATGCCGGGTATTTAATCAATA----AAATACAT--ATTATTAGTTATAAT--CTAAGCG-GAGTAAACAA-AA-------------------------------------------------TACATCAACATAATATT------------------------------------------------------------------------TAA--A-------------------AA----AAAAGC--AACGTGAGCAACGTA--ATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGAAA-----------A---------------------CA---AAAAATCAAGTT---------------------TAATGAC
droTak1 scf7180000415401:796558-796788 + AAGAGA----------------------------------------------------TC---AT--------CTGGTA----------TACATAC---------------------------------------C-------TTACTTTATAA--------------------A--AT---CAACCAAAATGCCGGGTAATTAATCAATA----AAATACAT--ATTATTAGTTCTAAT--CTAAGCG-GAGTAAACAA-AA-------------------------------------------------TACATCAGCATAATTAT------------------------------------------------------------------------TAACAAG------------------AA----ATAAGC--AACGTGAGCAACGTA--ATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAA-----CAAAA---------------------CA----AAAATCAAGTT---------------------TAATGAC
droEle1 scf7180000491271:175165-175403 - AAGAGA----------------------------------------------------TC---AT--------CTGGTA----------TACATCC---------------------------------------C-------TTACTTTA-AA--------------------A--AT---CAACCAAAATGCCGGGTAATTAATCAATA----AAATACAT--ATTATTAGTTCTAAT--CTAAGCG-AAGTAAACAAA-A--------------------------------------------------ACATCAACATATTGATAA-------------------------------------------AAATAAAA-------A-----TATAAATAA--A---------------------------AAGC--AACGTGAGCAACGTA--ATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAA-----CAAAA---------------------CA----AAAATCAAGTT---------------------TAATGAG
droRho1 scf7180000779260:4946-5170 - AAGAGA----------------------------------------------------TC---AT--------CTGGT------------ACATCC---------------------------------------C-------TTACTTTA-AA--------------------A--AT---CAACCAAAATGCCGGGTAATTAATCAATA----AAATACAT--ATTATTAGTTCTAAT--TTAAGTG-GAGTAAACAA-AA-------------------------------------------------TACATCAACATAATGATAAAT-------------------------------------------A------------------------TA-----------------------------AAAAGC--AACGTGAGCAACGTA--ATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAA-----CAAAA---------------------CA-----AAATCAAGTT---------------------TATTGAG
droFic1 scf7180000454066:1778858-1779100 + AAGAGA----------------------------------------------------TC---AT--------CTGGT------------ACATCC---------------------------------------C-------TTACTTTA-GA--------------------A--AG---CAACCAAAATGCCGGGTAATTAATCAATA----AAATACAT--ATTATTAGTTCTAAT--CTAAGCG-GAGTAAACAA-AA-------------------------------------------------TACATCAACATTATTATAA----------------------------------------------------------------------TAA--AG-----A-----------TAA----ACAAGC--AACGTGAGCAACGTA--AAATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAA-----CAAAACAAAAA----ACAA----AAACA----AAAATCAAGTT---------------------TAATGAC
droKik1 scf7180000302817:282037-282307 - AAGAGAGG---------------------------------------------AGAGATCATCAT--------CTGGT------------ACATCC---------------------------------------C-------TTACTTTA-GA--------------------A--AT---CAACCAAAATGCCGGGTAATTAATCAATA----AAATACAT--AATATTAGTGCTAATATATAAGCT-GAGTAAGCAA-GA-------------------------------------------------TACATCAACATACGGATAAAT-------CTAAAT--------------C----------------------------------------TAA--AG-----A-----------TAA----ATGAGC--AACGTGAGCAACGTAAAATATGGGAAACTTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAA-----CAAAACACAAAAAACACAA----AAACA---AAAAATCAAGTT---------------------TAAAGAC
droAna3 scaffold_13266:17141968-17142268 - AAAAGAAG--AAAAT-----CAATGAAAAAAAATATATATATTGTCGCTAACAAAAGATCATCAT--------CTGGT------------ACATCC---------------------------------------C-------TTACTTTA----------------------------------CCAAAATGCCGGGTAATTAATCAATA----AAATACAT--AATTTTAGTTTTAAT--TTAAGCT-GACTAAA-----A-------------------------------GCAAAAA-----------CACGTCAACATATTGATAATTGAT------------------------------------AAAAATAAAAAATAAAAA-----T-----TAA------------------------------------AAAATGAGCAACGTAAGAAATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTGAAG----GCAAAAAAAAAA----AAAT----AAATA----AAAATCAAGTT---------------------TAGTGAC
droBip1 scf7180000396735:400825-401109 - AGAAAACAAAAAAATCGCAACAA-----------------ATCGTCGCTAACAAAAGATCATCAT--------CTGGT------------ACATCC---------------------------------------C-------TTACTTTA----------------------------------CCAAAACGCCGGGTAATTAATCAATA----AAATACAT--AATTTTAGTTTTAAT--TTAAGCT-GACTAAAGCA-------------------------------------AAAACAAACAAAAAATACGTCTACTTATTGATAA-------------------------------------------AAAT-----------------------TAAA-AGAAAAAA-----------AAA----TAAAGT---AAATGAGCAACGTAAGAAATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAGG----CAAAG---------------------GA----AAAATCAAGTT---------------------TAGTGAC
dp5 3:8143997-8144251 - ATGAGA----------------------------------------------------TCATCAT--------CTGACA-----------ACATCC---------------------------------------CTCAAAAATTACTTTA-AA--------------------A--AT---CAACCAAAATGCCGGGTAACTAATCAATAAATAAAATACAT--AATATTAGTTGTAAT--CTAAGCT-GAATAAACAA-AATACAATAC-----------------------------A-----------TACATCGGCAA---------------------------------------------------AAATAAAA-------------------TAA--AG-----A---------------------AGT--TAATTGAGCAACGTAA-ATATGGGAAATCTGTAACTTTGGTGATCTTTTTAATTGTTATTAGGAAAAAAAACGAAAA---------------------CAGCAAGTAATCAAGTT---------------------CAAT---
droPer2 scaffold_4:2022753-2023009 - ATGAGA----------------------------------------------------TCATCAT--------CTGACA-----------ACATCC---------------------------------------CTCAAAAATTACTTTA-AA--------------------A--AT---CAACCAAAATGCCGGGTAACTAATCAATAAATAAAATACAT--AATATTAGTTGTAAT--CTAAGCT-GAATAAACAA-AATACAATAC-----------------------------A-----------TACATCGGCAA---------------------------------------------------AAATAAAA-------------------TAA--AG-----A---------------------AGT--TAATTGAGCAACGTAA-ATATGGGAAATCTGTAACTTTGGTGATCTTTTTAATTGTTATTAGGAAAAAAA----AAA-----------CGA----AAACAGCAAGTAATCAAGTT---------------------CAAT---
droWil2 scf2_1100000004822:1322021-1322326 - AGAAAC----------------------------------------------------CA---AT--------TTGATGAACCCAAAAATATATCCCCAAAAAAGAAAGAAAAAAAAAAACACAAAACAAACAAAC-------TTACTTTA-A-------------------------------TCCAAAATGCCGGGTAATTAATCAATA----AAATAT----------------------TAAAAG-AAAAAAAACAA-A-------------------------------------ACAAACAAAAAATACATTAATATTAAAATA---------------TTATTTTGTAAGAAACC----------AAAAATAAAA-------ACAAAAC-----AAAG-AGAAAAAA-----------AAATTAAAT--GA--AACGTGAGCAACGTAA-ATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTAATAACAAAAAAAA---AAA-----------CAATACAAAACA-----A-------------------------------------
droVir3 scaffold_12875:6230627-6230876 + ---------------------------------------------------------------------------------------------------------------------------------------C-------TTACTTTA-AA--------------------G--TT--GAAACCAAAATGCCGGGTAATTAATCAATA----ACATAATT-AATTATTAATTATTAT--TTAAGCG-AATTGAGCAAAAA-----TACATTATTCG-------------------------------------------------TAA-------AGC-AAAT--------------CT----------AAAAATAAAT-------------------------------------AATAACTAA----AT--GCAAAATGTAAGCAACGTAA-ATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAAAAAA--AAAA---------------------CA-----AAAACAAATTATATAAAATGCTAAAATAACAAAATAAC
droMoj3 scaffold_6496:23801597-23801847 - ---------------------------------------------------------------------------------------------------------------------------------------C-------TTACTTTA-AA--------------------T--GT-TTATACCAAAACGCCGGGTAATTAATCAATA----A-------------TTAATTATTAC--TTAAGCAGAAATGAGCAAAAA-----TACATTATTCG-------------------------------------TAAACTA----------------------T--------------ATAAAAATATATGAAAATAAAA-------------------TAA--AA-----AAGAATAAAAACTTA----TTAAGA--AACGTAAGCAACGTAAAATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAGAAG-----AATAGAAG----TAAA----AAACA-----AAAACTAACG----------------TA---ACAAAAC
droGri2 scaffold_15112:1119632-1119870 + -----------------------------------------------------------------------------------------------C---------------------------------------C-------TTACTTTA-AA--------------------G--AT-TTCAACCAAAATGCCGGGTAATTAATCAATA----ACATGAATTAATTATTAGTTATTAT--TTAAGCA-AAATGAGCTAAAA-----TACATTATTCGTAAACAACAAGA-AAATAAAAA-----------CACTTAA-----------------------------------------------------------------------------------AA--AA-----C-----------TAA----ATGAGA--AACGTAAGCAACGTAA-ATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAAACAAAAAATA---------------------CA-----TAATTAAAAC---------------------AAAAAAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GGGAGA----------------------------------------------------TC---AT--------CTGGT------------ACATAC---------------------------------------C-------TTACTTTA-AA--------------------A--AT---CAACCAAAATGCCGGGTAATTAATCAATA----AAATACAT--ATTATTAGTTCTAAT--CTAAGAG-GAGTAAACAAA-A-ACAA------------------AAAGAAAAACAAAAA-----------TACATCAACATTATGA------------------------------------------------------------------------ATAA--AG-----A------------AA----ATAAGC--AACGTGAGCAACGTA--ATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAAGAAGGCAAAA---------------------CA-----AAATCAAGTT---------------------TAATGACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGC--AACGTGAGCAACGTA--ATATGGGA......................................................................................................................28114.001400000086000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGGAAATCTGTAACTTTGGTGATC..................................................................................................2719.00900000036000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGAAATCTGTAACTTTGGTGATC..................................................................................................2514.00400000012001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGGAAATCTGTAACTTTGGTGA....................................................................................................2612.00200000002000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGGAAATCTGTAACTTTGGTGA....................................................................................................2512.00200000020000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--ATATGGGAAATCTGTAACTTTGGTGATC..................................................................................................3012.00200000002000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC--AACGTGAGCAACGTA--ATATGGGA......................................................................................................................2612.00200000011000000000
................................................................................................................................................TACTTTA-AA--------------------A--AT---CAACCAAAATGCCGGG.................................................................................................................................................................................................................................................................................................................................................................................................2812.00200000010000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGC--AACGTGAGCAACGTA--ATATGGGAA.....................................................................................................................2911.00100000000100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTAAATGTTATTAGTAAAAGAAGGC......................................................................2811.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTAACTTTGGTGATCTTTTTAAA..........................................................................................2611.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................TATGA------------------------------------------------------------------------ATAA--AG-----A------------AA----ATAAGC--AACGTGA........................................................................................................................................2711.00100000000001000000
.................................................................................................................................................ACTTTA-AA--------------------A--AT---CAACCAAAATGCC....................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AA----ATAAGC--AACGTGAGCAACGT.................................................................................................................................2211.00100010000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGTAACTTTGGTGATCTTTTT.............................................................................................2411.00100000000010000000
...................................................................................................................................................................................................................................................TAAGAG-GAGTAAACAAA-A-AC.............................................................................................................................................................................................................................................................................................................................2011.00100000010000000000
.........................................................................................................................................................................................................................................................................................................................ACATCAACATTATGA------------------------------------------------------------------------ATAA--AG-----A------------AA----ATAAGC--...............................................................................................................................................3011.00100000010000000000
..........................................................................................................................................................................................................................TACAT--ATTATTAGTTCTAAT--CTAAGAG-GA...........................................................................................................................................................................................................................................................................................................................................2911.00100000001000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGTAACTTTGGTGATCTTT...............................................................................................2211.00101000000000000000
............................................................................................................................................................................................................................................................................................................A-----------TACATCAACATTATGA------------------------------------------------------------------------ATAA--AG-----A------------.............................................................................................................................................................2411.00100000001000000000
..........................................................................................................................................................................................................................................TCTAAT--CTAAGAG-GAGTAAACAAA-A-ACA............................................................................................................................................................................................................................................................................................................................2811.00100000000010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGCAAAA---------------------CA-----AAATCAAGT.............................2111.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGGAAATCTGTAACTTTGGTGAT...................................................................................................2611.00100000000001000000
....................................................................................................................................................TTA-AA--------------------A--AT---CAACCAAAATGCCGGGTAAT.............................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGAAATCTGTAACTTTGGTGATC..................................................................................................2611.00100000000100000000
.................................................................................................................................................................................................CCGGGTAATTAATCAATA----A...............................................................................................................................................................................................................................................................................................................................................................................1911.00100000001000000000
..................................................................................................................................................................................................................................................CTAAGAG-GAGTAAACAAA-A-ACAA------------------AAAGAA...................................................................................................................................................................................................................................................................................................2911.00100000001000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGTAAAAGAAGGCAAAA---------------------CA-----AAATC.................................2611.00100000000000010000
............................................................................................................................................................................................AAATGCCGGGTAATTAATCA.......................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
..........................................................................................................................................................................................................................TACAT--ATTATTAGTTCTAAT--CTAAGA...............................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
........................................................................................................................................................................................................................................................................................................................TACATCAACATTATGA------------------------------------------------------------------------ATAA--AG-----A------------AA----ATAA...................................................................................................................................................2911.00100010000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGGAAATCTGTAACTTTGGT......................................................................................................2411.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTGTAACTTTGGTGATCT.................................................................................................2111.00101000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--ATATGGGAAATCTGTAACT...........................................................................................................2011.00100100000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGGAAATCTGTAACT...........................................................................................................1911.00100100000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAACGTA--ATATGGGAAATCTGTAAC............................................................................................................2811.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGGAAATCTGTAACTTTGGTGATCT.................................................................................................2811.00100000001000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGAAGGCAAAA---------------------CA-----AAATCAAGTT---------------------.......2611.00100010000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCAAAA---------------------CA-----AAATC.................................1580.13100000000001000000
droSec2
GGGAGA----------------------------------------------------TC---AT--------CTGGT------------ACATAC---------------------------------------C-------TTACTTTA-AA--------------------A--AT---CAACCAAAATGCCGGGTAATTAATCAATA----AAATACAT--ATTATTAGTTCTAAT--CTAAGAG-AAGTAAAGAAA-A-------------------------------ACAAAAA-----------TACATCAACATTATGA------------------------------------------------------------------------ATAA--AG-----A-----------AAA----ACAAGC--AACGTGAGCAACGTA--ATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAAGAAGGCAAAA---------------------CA-----AAATCAAGTT---------------------TAATGACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--ATATGGGAAATCTGTAACTTTGGTG.....................................................................................................2621.0021010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTA--ATATGGGAAATCTGT...............................................................................................................1820.5010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGAAGGCAAAA---------------------CA-----AAAT..................................2020.5010100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTTATTAGTAAAAGAAGGC......................................................................2220.5010100
...........................................................................................................................................................................................................................................CTAAT--CTAAGAG-AAGTAAAGAA...................................................................................................................................................................................................................................................................................................................................2220.5010010
..............................................................................................................................................................................A--AT---CAACCAAAATGCCGGGTAAT.............................................................................................................................................................................................................................................................................................................................................................................................2320.5010100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACGTA--ATATGGGAAATCTGT...............................................................................................................2320.5010010
..................................................................................................................................................................................................................................................................................................................................TTATGA------------------------------------------------------------------------ATAA--AG-----A-----------AAA----ACAAGC--...............................................................................................................................................2220.5010010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGC--AACGTGAGCAACGTA--ATATGGGAA.....................................................................................................................2820.5010100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGTGATCTTTTTAAATGTTATTA..................................................................................2720.5010010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AAA----ACAAGC--AACGTGAGCAACGT.................................................................................................................................2320.5010100
dm3
GGGAGA----------------------------------------------------TC---AT--------CTGGT------------ACATAC---------------------------------------C-------TTACTTTA-AA--------------------A--AT---CAACCAAAATGCCGGGTAATTAATCAATA----AAATACAT--ATTATTAGTTCTAAT--CTAAGAG-GAGTAAACAAA-A-ACAAAAC-------AAAAACAA-AAGGAAAACAAAAA-----------TACATCAACATTATGA------------------------------------------------------------------------ATAA--AG-----A-----------AAA----ATAAGC--AACGTGAGCAACGTA--ATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAAGAAGGCAAAA---------------------CA-----AAATCAAGTT---------------------TAATGACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGGAAATCTGTAACTTTGGTGA....................................................................................................25130.003000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010500001120001000000000000031200000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTA--ATATGGGAAATCTGT...............................................................................................................2017.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCAACGTA--ATATGGGAAATCTGT...............................................................................................................2617.0070000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010101210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGGAAATCTGTAACTTTGGTGATC..................................................................................................2716.0060000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000200000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--ATATGGGAAATCTGTAACTTTGGTGA....................................................................................................2816.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTA--ATATGGGAAATCTGTAACT...........................................................................................................2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................AT--ATTATTAGTTCTAAT--CTAAGA...............................................................................................................................................................................................................................................................................................................................................2315.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACGTA--ATATGGGAAATCTGTAACT...........................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................T--ATTATTAGTTCTAAT--CTAAGAG-GAGT.........................................................................................................................................................................................................................................................................................................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTA--ATATGGGAAATCTGTAACT...........................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................T--CTAAGAG-GAGTAAACAAA-A-ACAAAAC-------AAA..............................................................................................................................................................................................................................................................................................................3014.0040000000000000000000000000000000000000000000000000000000000000000000000000000010120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................TAAGAG-GAGTAAACAAA-A-ACAAAAC-------AAA..............................................................................................................................................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000010210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GC--AACGTGAGCAACGTA--ATATGGGA......................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000010000000000100000
....................................................................................................................................................................................................................................ATTAGTTCTAAT--CTAAGAG-GAGT.........................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTAACTTTGGTGATCTTTTTAAA..........................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000002020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTA--ATATGGGAAATCTGTAACTT..........................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGAAATCTGTAACTTTGGTGA....................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................TTATGA------------------------------------------------------------------------ATAA--AG-----A-----------AAA----ATAAGC--AACGTGA........................................................................................................................................2913.0030000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TCTAAT--CTAAGAG-GAGTAAACAAA-A-A..............................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATCTGTAACTTTGGTGATCTTTT..............................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTGAGCAACGTA--ATATGGGAA.....................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TATGA------------------------------------------------------------------------ATAA--AG-----A-----------AAA----ATAAGC--AACGTGA........................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000
..............................................................................................................................................................................................................................T--ATTATTAGTTCTAAT--CTAAGAG-GAG..........................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--ATATGGGAAATCTGTAACTTTGGTG.....................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC--AACGTGAGCAACGTA--ATATGGGA......................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGGAAATCTGTAACTTTGGTGA....................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000200000
..............................................................................................................................................................................................................................T--ATTATTAGTTCTAAT--CTAAGA...............................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TC---AT--------CTGGT------------ACATAC---------------------------------------C-------TTACTTTA-AA--------------------A--A.....................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000010020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACGTA--ATATGGGAAATCTGTAAC............................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TAA--AG-----A-----------AAA----ATAAGC--AACGTGAGCAACG..................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
......................................................................................................................................................................................................................................................................A-ACAAAAC-------AAAAACAA-AAGGAAAACAAA............................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................CAAAATGCCGGGTAATTAATCAATA----................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TAAT--CTAAGAG-GAGTAAACAAA-A-ACAAAA.........................................................................................................................................................................................................................................................................................................................2913.0030000000000000000000000000000000000000000000000000000000000000000000000000000021000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTA--ATATGGGAAATCTGTAACT...........................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TCTAAT--CTAAGAG-GAGTAAACAAA-A-ACA............................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
...............................................................................................................................................TTACTTTA-AA--------------------A--AT---CAACCAAAATGCCGGG.................................................................................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTGGTGATCTTTTTAAATGTT......................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGC--AACGTGAGCAACGTA--ATATGGG.......................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--ATATGGGAAATCTGTAACTTTGGT......................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....................................................................................................................................................................................................................................TTAGTTCTAAT--CTAAGAG-GAGTAAACAAA-.................................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGAAATCTGTAACTTTGGTGA....................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
................................................................T--------CTGGT------------ACATAC---------------------------------------C-------TTACTTTA-AA--------------------A--A.....................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GA----------------------------------------------------TC---AT--------CTGGT------------ACATAC---------------------------------------C-------TTACTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................CAT--ATTATTAGTTCTAAT--CTAAGAG-GAG..........................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TCTAAT--CTAAGAG-GAGTAAACAAA-A-ACAAA..........................................................................................................................................................................................................................................................................................................................3012.0020000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTA--ATATGGGAAATCTGTAACTTTGG.......................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTA--ATATGGGAAATCTGT...............................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAGAAGGCAAAA---------------------CA-----AAATCAAGTT---------------------.......2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................AA-----------TACATCAACATTATGA------------------------------------------------------------------------ATAA--AG-----A-----------A.............................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCAACGTA--ATATGGGAAATCTG................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..........................................................................................................................................................................................................................................TCTAAT--CTAAGAG-GAGTAAACAAA-A-ACAA...........................................................................................................................................................................................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TAAT--CTAAGAG-GAGTAAACAAA-A-ACA............................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GC--AACGTGAGCAACGTA--ATATGGGAAA....................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--ATATGGGAAATCTGTAAC............................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................TGCCGGGTAATTAATCAATA----AAATAC..........................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................AA--AG-----A-----------AAA----ATAAGC--AACGTGAGCAAC...................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTGATCTTTTTAAATGTTATTAGT................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTA--ATATGGGAAATCTGT...............................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGC--AACGTGAGCAACGTA--ATATGGGA......................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.............................................................................................TAC---------------------------------------C-------TTACTTTA-AA--------------------A--AT---CAACCAAAA........................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................T--------CTGGT------------ACATAC---------------------------------------C-------TTACTTTA-AA--------------------A--AT---CAAC.............................................................................................................................................................................................................................................................................................................................................................................................................3012.0020000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGTAAAAGAAGGCAAAA---------------------CA-----AAA...................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................TACTTTA-AA--------------------A--AT---CAACCAAAATGCCGGG.................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTGAGCAACGTA--ATATGGGAAATC..................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000100000
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...............................................................................................................................................................................................................................................................................................AAGGAAAACAAAAA-----------TACATCAACATTA..................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGAAATCTGTAACTTTGGTGAT...................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................AACAA-AAGGAAAACAAAAA-----------TACATC.........................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................AGTAAACAAA-A-ACAAAAC-------AAAAA............................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTGTAACTTTGGTGATCTTTTTA............................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................C--AACGTGAGCAACGTA--ATATGGG.......................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........................................................................................................................................................................................................................................................................................................................TACATCAACATTATGA------------------------------------------------------------------------ATAA--AG-----A-----------..............................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................A-ACAAAAC-------AAAAACAA-AAGGAAAACAAAAA-----------...............................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTA--ATATGGGAAATCTGTAAC............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................AATGCCGGGTAATTAATCAATA----AAA.............................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GGGAGA----------------------------------------------------TC---AT--------CTGGT------------ACATAC---------------------------------------C-------TTACTTTA-A---------------------A--AT---CAACCAAAATGCCGGGTAATTAATCAATA----AAATACAT--ATTATTAGTTCTAAT--CTAAGAG-GAGTAAACAAA-A-ACAA------------------AAACG-AAACAAAAA-----------TACATCAACAATATGA-------------------------------------------------------------------------TAA--AG-----A-----------AAA----TTAAGC--AACGTGAGCAACGTA--AAATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAGGAAAGCAAAA---------------------CA-----AAATCAAGTT---------------------TAATGACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTGAGCAACGTA--AAATGGGA......................................................................................................................2311.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGC--AACGTGAGCAACGTA--AAATGGGA......................................................................................................................2811.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................G-----A-----------AAA----TTAAGC--AACGTGAGCAACGT.................................................................................................................................2511.0010000100
....GA----------------------------------------------------TC---AT--------CTGGT------------ACATAC---------------------------------------C-------TT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAAAGCAAAA---------------------CA-----AAATCAAGTT---------------------T......2611.0010000100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCAACGTA--AAATGGGAAATCTG................................................................................................................2511.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCAAAA---------------------CA-----AAATCAAGT.............................1911.0010000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--AAATGGGAAATCTGTAACTTTGGT......................................................................................................2511.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AA----TTAAGC--AACGTGAGCAAC...................................................................................................................................2011.0010000100
.....................................................................................................................................................................................................................................................................................................AACAAAAA-----------TACATCAACAATATG................................................................................................................................................................................................................................................................2311.0011000000
...................................................................................................................................................................................................................................................................................................................................................................................................................A--AG-----A-----------AAA----TTAAGC--AACGTGAGC......................................................................................................................................2211.0010000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAATGTTATTAGTAAAGGA..........................................................................2111.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACGTA--AAATGGGAAATCTGTAACT...........................................................................................................2711.0011000000
...................................................................................................................................................................................................................................................................................................................................TATGA-------------------------------------------------------------------------TAA--AG-----A-----------AAA----TTAAGC--AACGTGA........................................................................................................................................2711.0011000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTA--AAATGGGAAATCTGTAAC............................................................................................................2411.0010000100
.............................................................................................TAC---------------------------------------C-------TTACTTTA-A---------------------A--AT---CAACCAAAATGC.....................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
.......................................................................................................................................................................................................................................AGTTCTAAT--CTAAGAG-GA...........................................................................................................................................................................................................................................................................................................................................1811.0010000010
...................................................................................................................................................................................................................................................................................................................................TATGA-------------------------------------------------------------------------TAA--AG-----A-----------AAA----TTAAGC--AACG...........................................................................................................................................2411.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTAACTTTGGTGATCTT................................................................................................1911.0010010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGGGAAATCTGTAACTTTGGTGATC..................................................................................................2811.0011000000
..............................................................................................................................................................................................................................................................................................AAACG-AAACAAAAA-----------TACATC.........................................................................................................................................................................................................................................................................2011.0010000100
...............................................................................................................................................................................................TGCCGGGTAATTAATCAATA----AAATAC..........................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
.....................................................................................................................................................................................................................................................................................................................................TGA-------------------------------------------------------------------------TAA--AG-----A-----------AAA----TTAAGC--AACGTGAGC......................................................................................................................................2711.0011000000
.................................................................................................................................................................................................................................ATTATTAGTTCTAAT--CTAAGAG-GAGT.........................................................................................................................................................................................................................................................................................................................................2611.0010000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTA--AAATGGGAAATCTGTAACTTTGGT......................................................................................................2711.0010000100
......................................................................................................................................................A-A---------------------A--AT---CAACCAAAATGCCGGGT................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
droYak3
GGGAGA----------------------------------------------------TCATGATGCATCTATCTGGT------------ACATAC---------------------------------------C-------TTACTTTA-AA--------------------A--AT---CAACCAAAATGCCGGGTAATTAATCAATA----AAATACAT--ATTATTAGTTCTAAT--CTAAGAG-GAGTAAACAAA-A-A------------------------------CAAAAA-----------TACATCAACATTATGATAA-------------------------------------------------AA--------------------AA--AG-----G-----------AAA----TTAAGC--AACGTGAGCAACGTA--ATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAAGAATGCAAAA---------------------CA-----AAATCAAGTT---------------------TAATGACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAAA---------------------CA-----AAATCAAGT.............................1811.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--ATATGGGAAATCTGTAACTTTGGT......................................................................................................2511.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGTAACTTTGGTGATC..................................................................................................1911.00100100000000
......................................................................................................................................................................................................................................................................................................................................GATAA-------------------------------------------------AA--------------------AA--AG-----G-----------AAA----TTAAGC--...............................................................................................................................................2111.00100000010000
..............................................................................................................................................................................A--AT---CAACCAAAATGCCGGGT................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTGAGCAACGTA--ATATGGGA......................................................................................................................2311.00100000010000
...........................................................................................CATAC---------------------------------------C-------TTACTTTA-AA--------------------A--AT---CAAC.............................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................AA--------------------AA--AG-----G-----------AAA----TTAAGC--AACGTG.........................................................................................................................................2211.00100000010000
....GA----------------------------------------------------TCATGATGCATCTATCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
................................................................................................................................................................................................................................................................................................................................CATTATGATAA-------------------------------------------------AA--------------------AA--AG-----G-----------AAA----TTAAG..................................................................................................................................................2611.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................C--AACGTGAGCAACGTA--ATATGGGA......................................................................................................................2411.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGTA--ATATGGGAAATCTGT...............................................................................................................2211.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTGGTGATCTTTTTAAATGTTA.....................................................................................2611.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................AG-----G-----------AAA----TTAAGC--AACGTGAGC......................................................................................................................................2111.00100000010000
.................................................................GCATCTATCTGGT------------ACATAC---------------------------------------C-------........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGAAATCTGTAACTTT.........................................................................................................1911.00100000100000
.......................................................................................................................................................................................AACCAAAATGCCGGGTAATT............................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--ATATGGGAAATCTGTAACTTTGGTGAT...................................................................................................2811.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................A----TTAAGC--AACGTGAGCAACGT.................................................................................................................................2111.00100000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GC--AACGTGAGCAACGTA--ATATGGGA......................................................................................................................2511.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AA----TTAAGC--AACGTGAGCAACGT.................................................................................................................................2211.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--ATATGGGAAATCTGTAACTTTGGTGA....................................................................................................2711.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGGAAATCTGTAACTTTGGTGATCT.................................................................................................2911.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AA----TTAAGC--AACGTGAGCAAC...................................................................................................................................2011.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGTAACTTTGGTGATCTT................................................................................................2111.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGC--AACGTGAGCAACGTA--..............................................................................................................................2011.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGAAATCTGTAACTTTGGT......................................................................................................2211.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGCAAAA---------------------CA-----AAATCAAGTT---------------------T......2311.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACGTA--ATATGGGAAATCTGT...............................................................................................................2311.00100000010000
droEug1
AAGAGA----------------------------------------------------TC---AT--------CTGGT------------ACATCC---------------------------------------C-------TTACTTTA-ATAAAAACAAAAACGAAAACTAGAAAC---CAACCAAAATGCCGGGTAATTAATCAATA----AAATACAT--ATTATTAGTTCTAAT--CTAAGCG-GAGAAAGCAA-AA-------------------------------------------------TACATCAACATAATGATAATG-ATAAAGA-AAAT----------------------GAAAGAAAGTAA----------------------AA--TG-----A-----------AAA----ATAAGC--AACGTGAGCAACGTA--ATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAAAAAA---AAA-----------CAA----AAACA----AAAATCAAGTT---------------------TAATGACSizeHit CountTotal NormTotal
No Reads
droBia1
AAGAGA----------------------------------------------------TA---AT--------CTGGT------------ACATCC---------------------------------------C-------TTACTTTA-AA--------------------A--AACAACAACCAAAATGCCGGGTATTTAATCAATA----AAATACAT--ATTATTAGTTATAAT--CTAAGCG-GAGTAAACAA-AA-------------------------------------------------TACATCAACATAATATT------------------------------------------------------------------------TAA--A-------------------AA----AAAAGC--AACGTGAGCAACGTA--ATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGAAA-----------A---------------------CA---AAAAATCAAGTT---------------------TAATGACSizeHit CountTotal NormTotal
No Reads
droTak1
AAGAGA----------------------------------------------------TC---AT--------CTGGTA----------TACATAC---------------------------------------C-------TTACTTTATAA--------------------A--AT---CAACCAAAATGCCGGGTAATTAATCAATA----AAATACAT--ATTATTAGTTCTAAT--CTAAGCG-GAGTAAACAA-AA-------------------------------------------------TACATCAGCATAATTAT------------------------------------------------------------------------TAACAAG------------------AA----ATAAGC--AACGTGAGCAACGTA--ATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAA-----CAAAA---------------------CA----AAAATCAAGTT---------------------TAATGACSizeHit CountTotal NormTotal
No Reads
droEle1
AAGAGA----------------------------------------------------TC---AT--------CTGGTA----------TACATCC---------------------------------------C-------TTACTTTA-AA--------------------A--AT---CAACCAAAATGCCGGGTAATTAATCAATA----AAATACAT--ATTATTAGTTCTAAT--CTAAGCG-AAGTAAACAAA-A--------------------------------------------------ACATCAACATATTGATAA-------------------------------------------AAATAAAA-------A-----TATAAATAA--A---------------------------AAGC--AACGTGAGCAACGTA--ATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAA-----CAAAA---------------------CA----AAAATCAAGTT---------------------TAATGAGSizeHit CountTotal NormTotal
No Reads
droRho1
AAGAGA----------------------------------------------------TC---AT--------CTGGT------------ACATCC---------------------------------------C-------TTACTTTA-AA--------------------A--AT---CAACCAAAATGCCGGGTAATTAATCAATA----AAATACAT--ATTATTAGTTCTAAT--TTAAGTG-GAGTAAACAA-AA-------------------------------------------------TACATCAACATAATGATAAAT-------------------------------------------A------------------------TA-----------------------------AAAAGC--AACGTGAGCAACGTA--ATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAA-----CAAAA---------------------CA-----AAATCAAGTT---------------------TATTGAGSizeHit CountTotal NormTotal
No Reads
droFic1
AAGAGA----------------------------------------------------TC---AT--------CTGGT------------ACATCC---------------------------------------C-------TTACTTTA-GA--------------------A--AG---CAACCAAAATGCCGGGTAATTAATCAATA----AAATACAT--ATTATTAGTTCTAAT--CTAAGCG-GAGTAAACAA-AA-------------------------------------------------TACATCAACATTATTATAA----------------------------------------------------------------------TAA--AG-----A-----------TAA----ACAAGC--AACGTGAGCAACGTA--AAATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAA-----CAAAACAAAAA----ACAA----AAACA----AAAATCAAGTT---------------------TAATGACSizeHit CountTotal NormTotal
No Reads
droKik1
AAGAGAGG---------------------------------------------AGAGATCATCAT--------CTGGT------------ACATCC---------------------------------------C-------TTACTTTA-GA--------------------A--AT---CAACCAAAATGCCGGGTAATTAATCAATA----AAATACAT--AATATTAGTGCTAATATATAAGCT-GAGTAAGCAA-GA-------------------------------------------------TACATCAACATACGGATAAAT-------CTAAAT--------------C----------------------------------------TAA--AG-----A-----------TAA----ATGAGC--AACGTGAGCAACGTAAAATATGGGAAACTTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAA-----CAAAACACAAAAAACACAA----AAACA---AAAAATCAAGTT---------------------TAAAGACSizeHit CountTotal NormTotal
No Reads
droAna3
AAAAGAAG--AAAAT-----CAATGAAAAAAAATATATATATTGTCGCTAACAAAAGATCATCAT--------CTGGT------------ACATCC---------------------------------------C-------TTACTTTA----------------------------------CCAAAATGCCGGGTAATTAATCAATA----AAATACAT--AATTTTAGTTTTAAT--TTAAGCT-GACTAAA-----A-------------------------------GCAAAAA-----------CACGTCAACATATTGATAATTGAT------------------------------------AAAAATAAAAAATAAAAA-----T-----TAA------------------------------------AAAATGAGCAACGTAAGAAATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTGAAG----GCAAAAAAAAAA----AAAT----AAATA----AAAATCAAGTT---------------------TAGTGACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................AA------------------------------------AAAATGAGCAACGTAAGAAATGGGA......................................................................................................................2712.002000020
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAATCTGTAACTTTGGT......................................................................................................1911.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------AAAATGAGCAACGTAAGAA............................................................................................................................2011.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGAAATCTGTAACTTTGGT......................................................................................................2211.001000010
................................................................................................................................................................................................................................................................A-----A-------------------------------GCAAAAA-----------CACGTCAACATATTGATA.............................................................................................................................................................................................................................................................2711.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTAAGAAATGGGAAATCT.................................................................................................................2011.001000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATTAGTGAAG----GCAAAA..................................................................1911.001000010
.......................................................................................................................................C-------TTACTTTA----------------------------------CCAAAATGCCGGGT................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..............................................................................................................................................................................................................................................AT--TTAAGCT-GACTAAA-----A-------------------------------GC...............................................................................................................................................................................................................................................................................................1911.001010000
.............................................................................................................................................................................................................................................AAT--TTAAGCT-GACTAAA-----A-------------------------------.................................................................................................................................................................................................................................................................................................1811.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAATGTTATTAGTGAAG----GC......................................................................2111.001000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAAATCTGTAACTTTGGTG.....................................................................................................2011.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAAATGTTATTAGTGAAG----GCA.....................................................................2311.001010000
droBip1
AGAAAACAAAAAAATCGCAACAA-----------------ATCGTCGCTAACAAAAGATCATCAT--------CTGGT------------ACATCC---------------------------------------C-------TTACTTTA----------------------------------CCAAAACGCCGGGTAATTAATCAATA----AAATACAT--AATTTTAGTTTTAAT--TTAAGCT-GACTAAAGCA-------------------------------------AAAACAAACAAAAAATACGTCTACTTATTGATAA-------------------------------------------AAAT-----------------------TAAA-AGAAAAAA-----------AAA----TAAAGT---AAATGAGCAACGTAAGAAATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAGG----CAAAG---------------------GA----AAAATCAAGTT---------------------TAGTGACSizeHit CountTotal NormTotal
No Reads
dp5
ATGAGA----------------------------------------------------TCATCAT--------CTGACA-----------ACATCC---------------------------------------CTCAAAAATTACTTTA-AA--------------------A--AT---CAACCAAAATGCCGGGTAACTAATCAATAAATAAAATACAT--AATATTAGTTGTAAT--CTAAGCT-GAATAAACAA-AATACAATAC-----------------------------A-----------TACATCGGCAA---------------------------------------------------AAATAAAA-------------------TAA--AG-----A---------------------AGT--TAATTGAGCAACGTAA-ATATGGGAAATCTGTAACTTTGGTGATCTTTTTAATTGTTATTAGGAAAAAAAACGAAAA---------------------CAGCAAGTAATCAAGTT---------------------CAAT---SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATCTGTAACTTTGGTGATCTTTT..............................................................................................2611.0010000000010
..............................................................................................................................................................................................................................................................AAACAA-AATACAATAC-----------------------------A-----------TACATCGGC......................................................................................................................................................................................................................................................................2611.0010010000000
..............................................................................................................................................................................A--AT---CAACCAAAATGCCGGGT................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCTGTAACTTTGGTGATCTTTT..............................................................................................2411.0010100000000
..........................................................................................................................................................................................................................................TGTAAT--CTAAGCT-GAATAAACAA-AATACA............................................................................................................................................................................................................................................................................................................................2911.0010100000000
..................................................................................................................................................................................T---CAACCAAAATGCCGGGTAACT............................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
........................................................................................................................................................................................ACCAAAATGCCGGGTAACTA...........................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGAAAA---------------------CAGCAAGTAATCAAGTT---------------------.......2511.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGGAAAAAAAACGAAAA---------------------CAGC.........................................2411.0010001000000
droPer2
ATGAGA----------------------------------------------------TCATCAT--------CTGACA-----------ACATCC---------------------------------------CTCAAAAATTACTTTA-AA--------------------A--AT---CAACCAAAATGCCGGGTAACTAATCAATAAATAAAATACAT--AATATTAGTTGTAAT--CTAAGCT-GAATAAACAA-AATACAATAC-----------------------------A-----------TACATCGGCAA---------------------------------------------------AAATAAAA-------------------TAA--AG-----A---------------------AGT--TAATTGAGCAACGTAA-ATATGGGAAATCTGTAACTTTGGTGATCTTTTTAATTGTTATTAGGAAAAAAA----AAA-----------CGA----AAACAGCAAGTAATCAAGTT---------------------CAAT---SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAA-ATATGGGAAATCTGTAACTTTGG.......................................................................................................2611.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................A-------------------TAA--AG-----A---------------------AGT--TAATTGAGCAACGTA................................................................................................................................2511.001010000
droWil2
AGAAAC----------------------------------------------------CA---AT--------TTGATGAACCCAAAAATATATCCCCAAAAAAGAAAGAAAAAAAAAAACACAAAACAAACAAAC-------TTACTTTA-A-------------------------------TCCAAAATGCCGGGTAATTAATCAATA----AAATAT----------------------TAAAAG-AAAAAAAACAA-A-------------------------------------ACAAACAAAAAATACATTAATATTAAAATA---------------TTATTTTGTAAGAAACC----------AAAAATAAAA-------ACAAAAC-----AAAG-AGAAAAAA-----------AAATTAAAT--GA--AACGTGAGCAACGTAA-ATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTAATAACAAAAAAAA---AAA-----------CAATACAAAACA-----A-------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................A-A-------------------------------TCCAAAATGCCGGGTA...............................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGTAACTTTGGTGATCTT................................................................................................2111.00101000
......................................................................................................................................................................................................................................................................................................................................................................AACC----------AAAAATAAAA-------ACAAAAC-----AAAG-AG...............................................................................................................................................................................2711.00100100
.............................................................................TGAACCCAAAAATATATCCCCAAAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110000
......................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAAAA-----------AAATTAAAT--GA--AACGTGAGC......................................................................................................................................2811.00101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-ATATGGGAAATCTGTAACTTTGGT......................................................................................................2611.00100100
droVir3
---------------------------------------------------------------------------------------------------------------------------------------C-------TTACTTTA-AA--------------------G--TT--GAAACCAAAATGCCGGGTAATTAATCAATA----ACATAATT-AATTATTAATTATTAT--TTAAGCG-AATTGAGCAAAAA-----TACATTATTCG-------------------------------------------------TAA-------AGC-AAAT--------------CT----------AAAAATAAAT-------------------------------------AATAACTAA----AT--GCAAAATGTAAGCAACGTAA-ATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAAAAAA--AAAA---------------------CA-----AAAACAAATTATATAAAATGCTAAAATAACAAAATAACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGCAACGTAA-ATATGGGAAATCTG................................................................................................................2612.002000000000000000000000000000101000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGGAAATCTGTAACTTTGGTGA....................................................................................................2512.002000000001000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................AA-----TACATTATTCG-------------------------------------------------TAA-------AGC-AA...............................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATATAAAATGCTAAAATAACT.......2411.001000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TGAGCAAAAA-----TACATTATTCG-------------------------------------------------TAA-------AGC-.................................................................................................................................................................................................................................................2711.001000000000000000000000000010000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TAT--TTAAGCG-AATTGAGCAAAAA-----TAC........................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000100000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAAGCAACGTAA-ATATGGGAAATCT.................................................................................................................2711.001000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAA-ATATGGGAAATCTGT...............................................................................................................1911.001000000000000000000000000000000000000010000000000000000000000000
..........................................................................................................................................................................................CAAAATGCCGGGTAATTAATCA.......................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TAT--TTAAGCG-AATTGAGCAAA..................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGGAAATCTGTAACTTTGGT......................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TAAAT-------------------------------------AATAACTAA----AT--GCAAAATG...........................................................................................................................................2411.001000000000000000000000000010000000000000000000000000000000000000
............................................................................................................................................................................................................................................................TTGAGCAAAAA-----TACATTATTCG-------------------------------------------------TAA-------AG...................................................................................................................................................................................................................................................2711.001000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGGAAATCTGTAACTTTGGTGATC..................................................................................................2711.001000000000000000000000000000000100000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AACTAA----AT--GCAAAATGTAAGC......................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTGATCTTTTTAAATGTTATTA..................................................................................2611.001000000000000000000000000010000000000000000000000000000000000000
......................................................................................................................................................................................AAACCAAAATGCCGGGTAAT.............................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................GAAACCAAAATGCCGGGT................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATGTAAGCAACGTAA-ATATGGGA......................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACTTTGGTGATCTTTTT.............................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
---------------------------------------------------------------------------------------------------------------------------------------C-------TTACTTTA-AA--------------------T--GT-TTATACCAAAACGCCGGGTAATTAATCAATA----A-------------TTAATTATTAC--TTAAGCAGAAATGAGCAAAAA-----TACATTATTCG-------------------------------------TAAACTA----------------------T--------------ATAAAAATATATGAAAATAAAA-------------------TAA--AA-----AAGAATAAAAACTTA----TTAAGA--AACGTAAGCAACGTAAAATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAGAAG-----AATAGAAG----TAAA----AAACA-----AAAACTAACG----------------TA---ACAAAACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................TTATACCAAAACGCCGGGT................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAATATGGGAAATCTGTAAC............................................................................................................2211.001000001
.................................................................................................................................................................................GT-TTATACCAAAACGCCGGGTAA..............................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
....................................................................................................................................................................................................GGTAATTAATCAATA----A-------------TTAATT............................................................................................................................................................................................................................................................................................................................................................2211.001100000
....................................................................................................................................................TTA-AA--------------------T--GT-TTATACCAAAACGCC....................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGA--AACGTAAGCAACGT.................................................................................................................................1811.001000100
................................................................................................................................................................................................................................................................GCAAAAA-----TACATTATTCG-------------------------------------TAA........................................................................................................................................................................................................................................................................2111.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTATTAGTAAAGAAG-----AATAGA..............................................................2211.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGTGATCTTTTTAAATGTTA.....................................................................................2211.001100000
......................................................................................................................................................................................................................................................................A-----TACATTATTCG-------------------------------------TAAACTA----------------------T--------------...............................................................................................................................................................................................................................2011.001100000
droGri2
-----------------------------------------------------------------------------------------------C---------------------------------------C-------TTACTTTA-AA--------------------G--AT-TTCAACCAAAATGCCGGGTAATTAATCAATA----ACATGAATTAATTATTAGTTATTAT--TTAAGCA-AAATGAGCTAAAA-----TACATTATTCGTAAACAACAAGA-AAATAAAAA-----------CACTTAA-----------------------------------------------------------------------------------AA--AA-----C-----------TAA----ATGAGA--AACGTAAGCAACGTAA-ATATGGGAAATCTGTAACTTTGGTGATCTTTTTAAATGTTATTAGTAAAAACAAAAAATA---------------------CA-----TAATTAAAAC---------------------AAAAAACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 12:48 PM