ID:dsi_5434 |
Coordinate:3r:4758793-4758942 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -24.6 | -24.3 | -24.1 |
 |
 |
 |
intergenic
No Repeatable elements found
|
TAACTCGGGAGCAGCACAATTTAATTTGTATATATCTGGGCTTTGGTTAACGACTTTACTTATTTACGATTGGCATTAAATGGTTAACACGTGTCCGCTCCACTGACTTTGAGTCTCTTAAAGATCTCGATGCTGCAAGCGCCCGTAATCTTTCGACCGCGAGGAGTCTACTGTTTGCCTTCGATTTCCCGCATTTCCAGGAACACGCATACGCAGTGGAGTCCAGCCAAAAGAGCAGATGCACACGGAC
**************************************************................(((..((((...((((((..((.(((....((..((.((((((((((...)))))))...))).))..))..)))(((((..((....))..))).)).))..)))))))))).))).................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | O001 Testis |
SRR553488 RT_0-2 hours eggs |
SRR553486 Makindu_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|
| ...............................................................................................................AGTCTCTTAAAGATCTCG......................................................................................................................... | 18 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 |
| ...........................................................................................................................................................................................................GACGCATACCCAGTGGA.............................. | 17 | 2 | 13 | 0.08 | 1 | 0 | 1 | 0 |
| ..................................................................................................................................................................................................................................CCAAAAGAACAGATGAA....... | 17 | 2 | 20 | 0.05 | 1 | 0 | 0 | 1 |
|
ATTGAGCCCTCGTCGTGTTAAATTAAACATATATAGACCCGAAACCAATTGCTGAAATGAATAAATGCTAACCGTAATTTACCAATTGTGCACAGGCGAGGTGACTGAAACTCAGAGAATTTCTAGAGCTACGACGTTCGCGGGCATTAGAAAGCTGGCGCTCCTCAGATGACAAACGGAAGCTAAAGGGCGTAAAGGTCCTTGTGCGTATGCGTCACCTCAGGTCGGTTTTCTCGTCTACGTGTGCCTG
**************************************************................(((..((((...((((((..((.(((....((..((.((((((((((...)))))))...))).))..))..)))(((((..((....))..))).)).))..)))))))))).))).................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M024 male body |
SRR553487 NRT_0-2 hours eggs |
SRR553485 Chicharo_3 day-old ovaries |
SRR553488 RT_0-2 hours eggs |
M025 embryo |
SRR618934 dsim w501 ovaries |
SRR553486 Makindu_3 day-old ovaries |
M023 head |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........................................................................................................................................................................................................................TCAGTTCGGTTTGCTCGT............. | 18 | 2 | 13 | 2.08 | 27 | 2 | 13 | 3 | 4 | 3 | 0 | 1 | 1 |
| ...........................................................................................................................................................TGGGGCTCCTCAGCTGAAAA........................................................................... | 20 | 3 | 5 | 0.80 | 4 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................ACGTGACTGAAACTGAGACAA................................................................................................................................... | 21 | 3 | 7 | 0.14 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| .........................................................................................................................................................................................AAGGGCGCAAAGGTCCTA............................................... | 18 | 2 | 9 | 0.11 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| ............................................................................................................................................................GGGGCTCCTCAGCTGAAAA........................................................................... | 19 | 3 | 20 | 0.10 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................ACGACGTTCGCGCGC......................................................................................................... | 15 | 1 | 12 | 0.08 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ................................................................................................................CAGAGAATTTCTGGGGTTA....................................................................................................................... | 19 | 3 | 15 | 0.07 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| .................................................................................................................................................................................................................................CGGTTTTCTTGTCTACTTAT..... | 20 | 3 | 18 | 0.06 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
| ....................................................................................................................................................................TCAGATGACAAGGGGA...................................................................... | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
Generated: 04/24/2015 at 10:25 AM