ID:

dsi_5419

 Coordinate:

x:11699086-11699316 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.4

Flybase annnotation

exon [x_11699317_11700077_+]; CDS [x_11699317_11700077_+]; CDS [x_11695567_11699085_+]; exon [x_11695389_11699085_+]; intron [x_11699086_11699316_+]

Repeatable elements

NameClassFamilyStrand
(CAG)nSimple_repeatSimple_repeat+
(CTG)nSimple_repeatSimple_repeat+
mature
  1. 2r:7638651-7638669 -
  2. 3r:20069510-20069528 -
  3. dsi_5419  x:11699257-11699275 +
star
  1. 2l:11031489-11031510 -
  2. 2r:7068718-7068739 +
  3. 2r:7068751-7068772 +
  4. 3l:7650285-7650306 +
  5. 3l:19324520-19324541 -
  6. 3r:758020-758041 -
  7. x:2999227-2999248 -
  8. x:9975936-9975957 +
  9. dsi_5419  x:11699226-11699247 +
  10. x:16994792-16994813 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CAATTTATAACGCTGGCCCCCACAAAGGCGGCCAAAACATCACCGAACAAGCAGCAAGCATTGCAATTGCAACAGCAACATGAGGAGCAGCAGCGGCAGCAGCAACAGGCCACAAATGCGTCATCGCCGGCGGCAACTGGCGATGCAACCACAACGCCCACAACAATAACAATTGGTGTTGCTGCTGTTAATGTTGCTGCTGTTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTACTGATGCTGCTGCTGATGCGACTACCTCGCTCAGCAGCAACAACAGCTGCGGCGAAGGCGTCGGCAATAATTTATCAAAGTTTGCAACAGTATCGA
**********************************************************************************************************************************************************************************************..((.((.((.((.((.((.((....)).)).)).)).)).)).))....******************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total O002
Head
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 M023
head
 M025
embryo
 M053
female body
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
.............................................................................................................................................................................................................................TGCTGCTGCTGCTACTGAT........................................................................................... 19 0 3 1.00 3 3 0 0 0 0 0 0 0
........................................................................................................................................................................................................................................................TGGTGCGTCTACCTCGCT................................................................. 18 2 3 0.33 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................AATTCGGGTTGCTGCTGTT.............................................................................................................................................. 19 2 5 0.20 1 0 0 1 0 0 0 0 0
..........................................................................................................................ATCGCCGGCGGCAACGCG............................................................................................................................................................................................... 18 2 5 0.20 1 0 1 0 0 0 0 0 0
..............................................................................................................................................................................................ATGTTGCTGCTGTTGCTGTTGC....................................................................................................................... 22 0 10 0.10 1 0 0 0 1 0 0 0 0
....................................................................................................................................................................................GCTGATGTTAATGTTGCT..................................................................................................................................... 18 1 12 0.08 1 0 1 0 0 0 0 0 0
.........................................................................................................................................................................................................................................TACCGATGCTGCTGCCGATC.............................................................................. 20 3 20 0.05 1 0 0 0 0 0 1 0 0
.............................................................................................................................................................................................................................TGCTGCTGTTGCTACTGA............................................................................................ 18 1 20 0.05 1 0 0 0 0 0 0 0 1
......................................................................................................................................................................................................GCTGTTGCTGTTGCTGCTG.................................................................................................................. 19 0 20 0.05 1 0 0 0 0 1 0 0 0
..........................................................................................................................................................................................................TTGCTGTTGCTGCTGCTGCTGC........................................................................................................... 22 0 20 0.05 1 0 0 0 0 0 0 1 0

Anti-sense strand reads

GTTAAATATTGCGACCGGGGGTGTTTCCGCCGGTTTTGTAGTGGCTTGTTCGTCGTTCGTAACGTTAACGTTGTCGTTGTACTCCTCGTCGTCGCCGTCGTCGTTGTCCGGTGTTTACGCAGTAGCGGCCGCCGTTGACCGCTACGTTGGTGTTGCGGGTGTTGTTATTGTTAACCACAACGACGACAATTACAACGACGACAACGACAACGACGACGACGACGACGACGACGATGACTACGACGACGACTACGCTGATGGAGCGAGTCGTCGTTGTTGTCGACGCCGCTTCCGCAGCCGTTATTAAATAGTTTCAAACGTTGTCATAGCT
*******************************************************************************************..((.((.((.((.((.((.((....)).)).)).)).)).)).))....********************************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total O001
Testis
 O002
Head
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 M024
male body		 SRR553487
NRT_0-2 hours eggs
 M023
head
 M025
embryo
...........................................................................................................................................................................................................................CGACGACGACGACGATGACT............................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................CGCCGCTTCCGCAGCCGT.............................. 18 0 1 1.00 1 1 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................................................................TCGGCGCAGCTTCCGCAG.................................. 18 2 3 0.33 1 0 0 1 0 0 0 0 0
.........................................................................................................................GAAGTGGCCGCCGTTGACC............................................................................................................................................................................................... 19 2 5 0.20 1 0 0 0 0 1 0 0 0
......................................................................................................................................................................................................................................ACGATGACTACGACG...................................................................................... 15 0 5 0.20 1 0 0 0 1 0 0 0 0
......................................................................................................................................................................................................................................AAGATGAATACGACGACAACTAC.............................................................................. 23 3 12 0.17 2 0 0 0 0 0 2 0 0
......CATTGCGATCGGGGGT..................................................................................................................................................................................................................................................................................................................... 16 2 10 0.10 1 0 0 1 0 0 0 0 0
...................................................................................................................................................................................................CGACGACAACGACAACGACGACGAC............................................................................................................... 25 0 20 0.05 1 0 0 0 0 0 0 1 0
......................................................................................................................................................................................................CGACAACGACAACGACGAC.................................................................................................................. 19 0 20 0.05 1 0 0 0 0 0 0 0 1
.......................................................................................................................................................................................................................ACGACGACGACGACGA.................................................................................................... 16 0 20 0.05 1 0 0 0 1 0 0 0 0
...................................................................................................................................................................................................CGACGACAACGACAACGAC..................................................................................................................... 19 0 20 0.05 1 0 0 0 0 0 0 1 0
..........GCGACCGGCGGTGTT.................................................................................................................................................................................................................................................................................................................. 15 1 20 0.05 1 0 0 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:11699036-11699366 + dsi_5419 CAATTTATAACGCTGGCCCCCACAAAGGCGGCCAAAACATCACCGAACAAGCAGCAAGCAT------------------TGCAATTG------CAACAGCAACATGA------GGAGCA---------GCAGCGGCAGCA---------GCAACA------------GGCCACAAATGCGTCATCGCCGGCGGCA---------------------------------ACTGGCGATG---CAACCACA--------------------------------------------------------------------------------------------------------------------------ACGCCCACAACAATAACAATTGGTGTT------GCTGCT------------GTTAATGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGCTGTTGC---TGTT---------------------------------------------GCTG---CTGCTGCTGCTG------C---------------TGCTGCTACTG---------ATGCTGC---TGCTGATGCGACTACCTCGCTC---A------GCAGCA------------------ACAACAGCTGCGGCGAAG------------GCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGA
droSec2 scaffold_21:98694-99012 + CAATTTATAACGCTGGCCCCCACAAAGGCGGCCAAAACATCACCGAACAAGCAGCAAGCAT------------------TGCAATTG------CAACAGCAACATGA------GGAGCA---------GCAGCGGCAGCA---------GCAACA------------GGCCACAAATGCGTCATCGCCGGCGGCA---------------------------------ACTGGCGATG---CAACCACA--------------------------------------------------------------------------------------------------------------------------ACGCCCACAAC------AATTGGTGTT------GCTGCT------------GTTAATGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGCTGTTGC---TGTT---------------------------------------------GC---------TGCTGCTG------C---------------TGCTGCTACTG---------ATGCTGC---TGCTGATGCGACTACCTCGCTC---A------GCAGCA------------------ACAACAGCTGCGGCGAAG------------GCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGA
dm3 chrX:12340774-12341110 + CAATTTATAACGCTGGCCCCCACAAAGGCGGCCAAAACATCACCGAACAAGCAGCAAGCAT------------------TGCAATTG------CAACAGCAACACGA------GGAGCAGCA------GCGGCAGCAGCA---------GCAACA------------GGCCACAAATGCGTCATCGCCGGCGGCA---------------------------------ACTGGCGATG---CAACCACA--------------------------------------------------------------------------------------------------------------------------ACGCCCACAACAATAACAATTGGTGTT------GCTGCT------------GTTAATGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGCTGTTGC---TGTT---------------------------------------------GTTGCTTCTGCTGCTGCTG------C---------------TGCTGCTACTG---------ATGCTGC---TGCTGATGCGACTACCTCGCTC---A------GCAGCA------------------ACAACAGCTGCGGCGAAG------------GCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGA
droEre2 scaffold_4690:14516907-14517237 - CAATTTATAACGCTGGCCCCCACAAAGGCGGCCAAAACATCACCGAACAAGCAGCAAGCAC------------------TGCAATTG------CAACAGCAACATGA------GCAGCAGCA------GCAGCAGCAGCA---------GCAACA------------GGCCACAAATGCGTCATCGCCGGCGGCA---------------------------------ACTGGCGATG---CAACCACA--------------------------------------------------------------------------------------------------------------------------ACGCCCACAACAATAACAACTGGTGTT------GCTGCT------------GTTAATGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGCTGTTGC---TGCT---------------------------------------------GC---------TGCTGCTG------A---------------TGCTGCTGCTG---------CTGCTGCCTCTGCTGATGCGACTACCTCGCTC---A------GCAGCA------------------GCAACAGCTGCGGCGAAG------------GCGGCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGA
droYak3 X:6616684-6617005 + CAATTTATAACGCTGGCCCCCACAAAGGCGGCCAAAACATCACCGAACAAGCAGCAATCAT------------------TGCAATTG------CAACAGCAACATGA------GC---------------AGCAGCAGCA---------GCAACA------------GGCCACAAATGCGTCATCGCCGGCGGCA---------------------------------ACTGGCGATG---CAACCACAACGC-----------------------------------------------------------------------------------------------------------------------CGCCCACAACAATAACAATTGGTGTT------GCTGCT------------GTTAATGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTG---TTGCTCCTCCT------------------------------------------------------GCTGCTGCTG------C---------------TGCTGCTGCTG---------CAGTTGC---TGTTGATGCGACTACCTCGCTC---A------GCGGCA------------------ACAACAGCTGCGGCGAAG------------GCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGA
droEug1 scf7180000409110:715113-715437 + CAATTTATAACGCTGGCCCCCACAAAGGCGGCCAAAACATCGCCGAACAAGCAACAACCAT------------------TGCAAGTG------CAACAGCAACAGCA------GCAACAGCAACAGAAGCAGCAGCAGCG---------GCAACA------------GGCCACAAATGCGTCATCGCCGGCGGCA---------------------------------ACAGGCGATG---CAACCACA--------------------------------------------------------------------------------------------------------------------------ACGCCCACAACAATAACAATTGGTGTT------GCTGCT------------GTTAATGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTG---TTGC---TGTT---------------------------------------------GC---------TGTTGCTG---------------------------ATGCTA---------ATGCTGC---TGCTGATACTACTACCTCGCTC---A------GCGGCA------------------ACAACAGCTGCGGCGAAG------------GCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGA
droBia1 scf7180000302075:1116662-1116989 + CAATTTATAACGCTGGCCCCCACAAAGGCGGCCAAAACATCGCCGAACAAGCAACAAGCAT------------------TGCAAGTG------CAACAGCAACA---------------GCA------ACATGAGCAGCG---------GCAACA------------GGCCACAAATGCGTCATCGCCGGCGGCA---------------------------------GCAGGCGATG---CAACCACA--------------------------------------------------------------------------------------------------------------------------ACGCCCACAACAATAACAATTGGTGTT------GCTGCT------------GTTGCTGCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGCTG---CTGCTACT---------TCA---------------------GATGT------TGCTG---CTGCTACCGCTG------C---------------TGCTGCTACCG---------CTGCTGC---TG---------TTACCTCGCTCAGCA------GCAGCA------------------ACAACAGCTGCGGCGAAG------------GCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGA
droTak1 scf7180000415659:217945-218284 - CAATTTATAACTTTGGCCCCCACAAAGGCGGCCAAAACATCGCCGAACAAGCAACAGACAT------------------TGCAATTG------CAAGTGCAACACGA------GCAGCACGA------GCAGCAGCAGCA---------GCAACA------------GGCCACAAATGCGTCATCGCCGGCGGCA---------------------------------ACAGGCGATG---CAACCACA--------------------------------------------------------------------------------------------------------------------------ACGCCCACAACAATAACAATTGGTGTT------GCTGCT------------GTTAATGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTG---TTGC---TGTT---GGTACTCTTGGTGTTGCTCCCACC------GATG---------------CTGCTGCTGCTG------C---------------TGCTGCT------------------AC---TG---------CTACCTCGCTCAGCA------GCAGCA------------------ACAACAGCTGCGGCGAAG------------GCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGA
droEle1 scf7180000490546:357170-357479 + CAATTTATAACGCTGGCCCCCACAAAGGCGGCCAAAACATCGCCGAACAAGCAACAAGCAT------------------TGCAATTGCAAGTGCAACAGCAACACGA------GCAGCAAC---------AGCAACAGCAGCAACAGCGGCAACA------------GGCCACAAATGCGTCATCGCCGGCGGCA---------------------------------ACAGGCGATG---CAACCACA--------------------------------------------------------------------------------------------------------------------------ACGCCCACAACAATAACAATTGGTGTT------GCTGAT------------GTTAATGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGCTGCTGC---TGC---------------------------------------------------------------------------------------TGCTGCC---------------ACTGC---TGCT---------G---CGATC---A------ACAGCA------------------ACAACAGCTGCGGCGAAG------------GCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGA
droRho1 scf7180000777027:18514-18811 + CAATTTATAACGCTGGCCCCCACAAAGACGGCCAAAACATCGCCGAACAAGCAACAAGCAT------------------TGCAATTGCAAGTGCAACAGCAACATGA---------------------GCAGCATCAGCA---------GCAACA------------GGCCACAAATGCGTCATCGCCGGCGGCA---------------------------------ACAGGCGATG---CAACCACA--------------------------------------------------------------------------------------------------------------------------ACGCCCACAACGATAACAATTGGTGTT------GCTGCT------------GTTAATGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTACTACTGC---TGCT---------------------------------------------GC------------TGCT---------------------------------------------GCTGC---TGCT---------GCCGCGCTC---A------ACAGCA------------------ACAACAGCTGCGGCGAAG------------GCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGA
droFic1 scf7180000453882:67984-68344 + CAATTTATAACGCTGGCCCCCACAAAGGCGGCCAAAACATCGCCGAGCAAGCAACAAGCATTACAATCCCAATCGCAATTGCAATTG------CAATCGCAA------------GTGCA---------ACAACAGCAGCA---------GCAACA------------AGCCACAAATGCGTCATCGCCGGCGGCA---------------------------------ACAGGCGATG---CAACCACA--------------------------------------------------------------------------------------------------------------------------ACGCCCACAACGATAACAATTGGTGTTGCTGCTGGCGTTGCTGTTGCTGCTGTTGATGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGC---TGCTGCTACT---------------------------------GATGT------TGCTG---------------------TTGCTGCTGTTTCTGCTGCTGCTACTG---------CTGCTGC---TG---------CTACCTCGGTC---G------GCGGCA------------------ACAACAGCTGCGGCGAAG------------GCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGA
droKik1 scf7180000302469:1229181-1229550 - CAATTTATAACGCTGGCCCCCAGCAAG---------------------------CAGGCAT------------------TGCAAGTG------CAACAGCAAC---------------------------AGCAACAGCA---------GCAACA------------GGCCACAAATGCGTCATCGCCGGCAGCA------GCAGCAGCAGCAGCAGCCGCGGCAGCAACAAGCAATGCGACAACTGCA--------------------------------------------------------------------------------------------------------------------------ACGCCTACAACTTCTGCAACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGCTCTCAATGTGGCTCCCAGT------CTAGGTGTTGC---TCCC---AGT---CTAGGTGCTAGTCCTACCGCTCTTGATGT------TGTTGCTAC---------------------TGCTGTTAACGCTCCCGC------------------------TCTTGATG--------TTGCTC---A------C-GACCGCGACCACGACGACAACGACAACAGCTGCGGCGAAGGCATCGCCGACGGCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGA
droAna3 scaffold_13335:1010583-1010937 - CAATTTATAACTTTGGCCCCCACAAAAGCGACCAAAATATCACCAAGAG---------------------------------GAGTG------CAACAGCAAC------------------------------------------------------------------------ATGCGTCATCGCAATCAGTA---------------------------------TC------TG---CAACTACAACGCCT-----------------------------------ACAACGAATTTGAAAGCAATTAGGCAAGAGGAGAAACAGCAACAGCAACAG----------------------------------------CAACAGCAGCAAG---------------------------------------------------------------------------------AGCA-------------------------------------------------------------------------------------------------GCAAT--------------------------------------------CATTGCATGTTGCTGTTGCTGTTGAGGCAGCAACATCT------GTTGGTG---TTGCTCAT---------ACG---------------------GATGTTGCTATTGC---------TATTGCTGATAGTGTTGC------------TACTGTGGCTAGTGTTGCTGATGGTGT---TGCCGATGTGGAT------------G------TAGACA------------------ACAACAGCTGCG------------------------GCAATAATT-TATCAAAGTTTGCAACAGTATCGA
droBip1 scf7180000395498:123350-123632 + CAATTTATAACTTTGGCCCCCACAAAGGCGGCCAAAATATCACCAA------------CAT------------------------TG------CAACAGCAACATGCGTCATCG----------------------------------------------------------------------CAATTAAAGCA------------------------------------AT------------C----------------------------------------------------------------------------------------------------------------------TGCAACAACGCCTACGAAAG----------------------------------------------------------------------AGAAGCAGCAGCAGCAACAACAGCA-------------------------------------------------------------------------------------------------GCAAT--------------------------------------------CATTGGAT------GTTGCTGTTGAGGTAGCAACATCAGATGTTGCTA---CAGC---TATT---GGTGATAGTGGTGTTGC------------------------------------------------------------------TGGTGTAGCTG---------AT---GT---TGCCGATGTGAATGTAT------------------ACA------------------ACAACAGCTGCG------------------------GCAATAATT-TATCAAAGTTTGCAACAGTATCGA
dp5 XL_group1a:3077915-3078305 + CAATTTATAACGCTGGCCCCCACAAAGGCGGCCAAAACATCGCCAGGGAAGC------------------------------------------------------------------------------AGCAGCAGCAGCAACA---ACCACAGGCGAAATTGGTGGCCACAAATGCGTCATCGCTGGCGGCA------------------------------------GTCGCTG---CAACGACAACGCCA--------------------------------------------------------------------------------------------------------------------ACGCCAACACCTACAACAATTGCTCCT------GCTGCC---------------ACTGCCACTGCCACTACCGCTGCAGCAACA------------------GCAACAGCGATAACAATAGAGCGATCTGTGGCCAGTGTTGATGTTGCAGCCGCAGTCGCTGGGATCGGGATCGAGATCGGCATCGGCATCGACACCAACATCGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAT------------------------------------GACCGAAGCGGCGACGGCAACGGCAACGCCAACAGCTGCGGCGAAG------------GCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGA
droPer2 scaffold_12:201013-201397 - CAATTTATAACGCTGGCCCCCACAAAGGCGGCCAAAACATCGCCAGGGAAGC------------------------------------------------------------------------------AGCAGCAGCAGCAACA---ACCACAGGCGAAATTGGTGGCCACAAATGCGTCATCGCTGGCGGCA------------------------------------GTCGCTG---CAACGACAACGCCA--------------------------------------------------------------------------------------------------------------------ACGCCAACACCTACAACAATTGCTCCT------GCTGCC---------------ACTGCCACTG------CCGCTGCAGCAACA------------------GCAACAGCGATAACAATAGAGCGATCTGTGGCCAGTGTTGATGTTGCAGCCGCAGTCGCTGGGATCGGGATCGAGATCGGCATCGGCATCGACACCAACATCGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAT------------------------------------GACCGAAGCGGCGACGGCAACGGCAACGCCAACAGCTGCGGCGAAG------------GCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGA
droWil2 scf2_1100000003789:1699-2044 - ACAGCAACAG------CAGCAACAATGGCAGCAACAACAACAGCAACAA-----CAACTGCAGCAGCAACAAT------TGCAGCAA------CAACAGCAACAGCA------GCAACA---------ACAGCAGCAACA---------ACAACA------------G----------------------------------------------------------------------------------CAGCA-----------------------------------GCAACA-----------------G---------CAGCATCAGCAACAGCAACAGCAGCAGCGAATGCAACAGCA-------ACAGCAACAGCAGCAACAATTGCAGCA------ACAACAACAACAGCAGCAGCAACAACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAC---AGCAACAACA------------------------------------------------------ACAGCAGCAG------C---------------AACAGCAACAA---------CAGCAGC---AGCAGCAGCAACTGCAACA-AC---A------GCAGCA------------------GCAACAGCAACAACAACA------------ACATCAGCAGCAACAGCAACAACAGCAGCAACAGCAACAA
droVir3 scaffold_12928:3968648-3969014 + CAATTTATAACGTTGGCCCCCACTAAGGCGGCCAT--------------------------------------------TGC------------------------------------------------AGCGGCAGCG---------GCCAAA-ACGTTGCCGGCGGCCACAAATGCGTCATCACCGGCAACGACTGCAATTGCAACA---GTGGCCGCAGCAGCATCAGCAATTG---CAACCACAGCAAC--------------------------------------------------------------------------------------------------------------GGCGACAACGCCTACAACAGCAACAG---------------------------------------------------CAGCAGCTGCAGCA------------------GCGGCAGCAATAACAATAG-------------------------------------------------------------------------------------------------CAACAACTGGCGATGAGCAGAAGATTCAGCCACGATCTGTT---------GCTGCTGTCGACGCG---------------GCCG---TTGC---TGCT---------------------------------------------GC---------TGCTGCT---------------------------------------------GCTGC---TGCT---------G---TCGAC---AATGAGCGCAGCA------------------ACAACAGCTGCGGCGAAG------------GCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGA
droMoj3 scaffold_6359:559769-560117 + CAATTTATAACGCTGGCCCCCACTAAGGCGGCCAATGCG--------------------------------------------------------------------------------------------GCGGCAGC----------------------------GGCCACAAATGCGTCATCGCCTGCAGCA---------------------------------GCAGCGG------------------CAGCAGCAGCAACGGCAGCAATTGCAACCGCCGCAAC--------------------------------------------------------------------------AGCAGCAACGCCTACAACAAC---------------------------------------------------------------------AGAAGCGGCAACAGCAA------------CAG----------------------------------------------------------------CAACATCAACAGCAACATCAACAGCAGCAATAACAATAGCAACAACTGGCGATGAGCAAACGTCGCAGTTACGA------------------------------------------------------GC---TGTT---------------------------------------------GCTG---CTGCTACGACAG------C---------------GACGGCTGCTG---------CGGCTGC---TGTT---------G---TCGAC---A------GCAGCA------------------ACAACAGCTGCGGCGAAG------------GCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGA
droGri2 scaffold_15081:3771553-3771878 - CAATTTATAACGCTGGCGGCCACTAAAGCAGCAGCAACA------------------------------------------------------------------------------------------------------------------CT------------GGCCACAAATGCGTCATCAACAACTGCA------GCTGCAACAGCAGCAACAGTAGCA---ACAGCTACCA---CAACGACAACGCCT-----------------------------------ACAACA-----------------C---------AAACACCAACAGCAACAG----------------------------------------CAACAACAACTGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACGATCAGACGACACAGCAACAATCTGTGGCG------ACTGTTGCTGATGCTTCTGCTGCT---GTTG---------CTGTTGCTGTTGGTGTTGGGGGTGTTGGCGTTGTCGTTGTGGTGGC------TGTTGTTGG---------------------AGTTGTTGCTGTTGCAGC------------------------TGTAGTT------------------G------TTGATG------------------A------------------------------------------------CGCGGTTGTGGTTGGTGTTGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CAATTTATAACGCTGGCCCCCACAAAGGCGGCCAAAACATCACCGAACAAGCAGCAAGCAT------------------TGCAATTG------CAACAGCAACATGA------GGAGCA---------GCAGCGGCAGCA---------GCAACA------------GGCCACAAATGCGTCATCGCCGGCGGCA---------------------------------ACTGGCGATG---CAACCACA--------------------------------------------------------------------------------------------------------------------------ACGCCCACAACAATAACAATTGGTGTT------GCTGCT------------GTTAATGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGCTGTTGC---TGTT---------------------------------------------GCTG---CTGCTGCTGCTG------C---------------TGCTGCTACTG---------ATGCTGC---TGCTGATGCGACTACCTCGCTC---A------GCAGCA------------------ACAACAGCTGCGGCGAAG------------GCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTG------C---------------TGCTGCTACTG---------AT......................................................................................................................................1931.00300000300000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGCTGTTGC---TGTT---------------------------------------------GC...................................................................................................................................................................................................22100.10110000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGTTGC---TGTT---------------------------------------------GCTG---CTG...........................................................................................................................................................................................19200.05100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGC---TGTT---------------------------------------------GCTG---CTGCTGCTGC....................................................................................................................................................................................22200.05100000001000000000
droSec2
CAATTTATAACGCTGGCCCCCACAAAGGCGGCCAAAACATCACCGAACAAGCAGCAAGCAT------------------TGCAATTG------CAACAGCAACATGA------GGAGCA---------GCAGCGGCAGCA---------GCAACA------------GGCCACAAATGCGTCATCGCCGGCGGCA---------------------------------ACTGGCGATG---CAACCACA--------------------------------------------------------------------------------------------------------------------------ACGCCCACAAC------AATTGGTGTT------GCTGCT------------GTTAATGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGCTGTTGC---TGTT---------------------------------------------GC---------TGCTGCTG------C---------------TGCTGCTACTG---------ATGCTGC---TGCTGATGCGACTACCTCGCTC---A------GCAGCA------------------ACAACAGCTGCGGCGAAG------------GCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........AACGCTGGCCCCCACAAAGGCGGCCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCTGCGGCGAAG------------GCGTCGGCAA..............................2511.0010100
...................................................................................................................AGCA---------GCAGCGGCAGCA---------GCAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21150.0710010
dm3
CAATTTATAACGCTGGCCCCCACAAAGGCGGCCAAAACATCACCGAACAAGCAGCAAGCAT------------------TGCAATTG------CAACAGCAACACGA------GGAGCAGCA------GCGGCAGCAGCA---------GCAACA------------GGCCACAAATGCGTCATCGCCGGCGGCA---------------------------------ACTGGCGATG---CAACCACA--------------------------------------------------------------------------------------------------------------------------ACGCCCACAACAATAACAATTGGTGTT------GCTGCT------------GTTAATGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGCTGTTGC---TGTT---------------------------------------------GTTGCTTCTGCTGCTGCTG------C---------------TGCTGCTACTG---------ATGCTGC---TGCTGATGCGACTACCTCGCTC---A------GCAGCA------------------ACAACAGCTGCGGCGAAG------------GCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC---TGTT---------------------------------------------GTTGCTTCTGCTGCTGC....................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTG---------ATGCTGC---TGCTGA........................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTACTG---------ATGCTGC---TGCT..........................................................................................................................1922.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................AACAGCAACACGA------GGAGCAGCA------GCG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAAG------------GCGTCGGCAATAAT..........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGC---TGTT---------------------------------------------GTTGCTTCTGCTG........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCGACTACCTCGCTC---A------GCA...........................................................................................2211.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------ACAACAGCTGCGGCGAA.....................................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................A---------GCAACA------------GGCCACAAATGCGTCAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................ACTGGCGATG---CAACCACA--------------------------------------------------------------------------------------------------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAAG------------GCGTCGGCAATA............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTG---------ATGCTGC---TGCTGATGC.....................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGTTGC---TGTT---------------------------------------------GTTGCTT..............................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................ATTGGTGTT------GCTGCT------------GTTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC---TGTT---------------------------------------------GTTGCTTCTGCTGCT......................................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................AGCA------GCGGCAGCAGCA---------GCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000
........................................................................................................................................................ACA------------GGCCACAAATGCGTTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1950.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................CGA------GGAGCAGCA------GCGGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1860.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.....................................................................................................................CAGCA------GCGGCAGCAGCA---------GCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGCTGTTGC---TGTT---------------------------------------------GTTGC................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010
...................................................................................................................AGCAGCA------GCGGCAGCAGCA---------GC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000002000000000000000000
....................................................................................................................GCAGCA------GCGGCAGCAGCA---------GCAACA------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.1310000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGCTGTTGC---TGTT---------------------------------------------GTTG.................................................................................................................................................................................................21180.1120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
....................................................................................................................GCAGCA------GCGGCAGCAGCA---------GC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000010000000000000000000000000000
......................................................................................................................AGCA------GCGGCAGCAGCA---------GC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTG---------ATGCTGC---TGCTGATG......................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CAATTTATAACGCTGGCCCCCACAAAGGCGGCCAAAACATCACCGAACAAGCAGCAAGCAC------------------TGCAATTG------CAACAGCAACATGA------GCAGCAGCA------GCAGCAGCAGCA---------GCAACA------------GGCCACAAATGCGTCATCGCCGGCGGCA---------------------------------ACTGGCGATG---CAACCACA--------------------------------------------------------------------------------------------------------------------------ACGCCCACAACAATAACAACTGGTGTT------GCTGCT------------GTTAATGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGCTGTTGC---TGCT---------------------------------------------GC---------TGCTGCTG------A---------------TGCTGCTGCTG---------CTGCTGCCTCTGCTGATGCGACTACCTCGCTC---A------GCAGCA------------------GCAACAGCTGCGGCGAAG------------GCGGCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................GGCCACAAATGCGTCATCGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
................................................................................................CAGCAACATGA------GCAGCAGCA------GC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.3310000100
.................................................................................................AGCAACATGA------GCAGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1860.1710000010
droYak3
CAATTTATAACGCTGGCCCCCACAAAGGCGGCCAAAACATCACCGAACAAGCAGCAATCAT------------------TGCAATTG------CAACAGCAACATGA------GC---------------AGCAGCAGCA---------GCAACA------------GGCCACAAATGCGTCATCGCCGGCGGCA---------------------------------ACTGGCGATG---CAACCACAACGC-----------------------------------------------------------------------------------------------------------------------CGCCCACAACAATAACAATTGGTGTT------GCTGCT------------GTTAATGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTG---TTGCTCCTCCT------------------------------------------------------GCTGCTGCTG------C---------------TGCTGCTGCTG---------CAGTTGC---TGTTGATGCGACTACCTCGCTC---A------GCGGCA------------------ACAACAGCTGCGGCGAAG------------GCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------GCGGCA------------------ACAACAGCTGCGGCGA......................................................2311.00101000000000
..............................................................................................................................................................................AATGCGTCATCGCCGGCGGCA---------------------------------ACTGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
.................................................................................................................GC---------------AGCAGCAGCA---------GCAACA------------GGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.11101000000000
.......................................................................................................ATGA------GC---------------AGCAGCAGCA---------GCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19110.09100001000000
..........................................................................................................A------GC---------------AGCAGCAGCA---------GCAACA------------GG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21180.06101000000000
droEug1
CAATTTATAACGCTGGCCCCCACAAAGGCGGCCAAAACATCGCCGAACAAGCAACAACCAT------------------TGCAAGTG------CAACAGCAACAGCA------GCAACAGCAACAGAAGCAGCAGCAGCG---------GCAACA------------GGCCACAAATGCGTCATCGCCGGCGGCA---------------------------------ACAGGCGATG---CAACCACA--------------------------------------------------------------------------------------------------------------------------ACGCCCACAACAATAACAATTGGTGTT------GCTGCT------------GTTAATGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTG---TTGC---TGTT---------------------------------------------GC---------TGTTGCTG---------------------------ATGCTA---------ATGCTGC---TGCTGATACTACTACCTCGCTC---A------GCGGCA------------------ACAACAGCTGCGGCGAAG------------GCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGASizeHit CountTotal NormTotal
No Reads
droBia1
CAATTTATAACGCTGGCCCCCACAAAGGCGGCCAAAACATCGCCGAACAAGCAACAAGCAT------------------TGCAAGTG------CAACAGCAACA---------------GCA------ACATGAGCAGCG---------GCAACA------------GGCCACAAATGCGTCATCGCCGGCGGCA---------------------------------GCAGGCGATG---CAACCACA--------------------------------------------------------------------------------------------------------------------------ACGCCCACAACAATAACAATTGGTGTT------GCTGCT------------GTTGCTGCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGCTG---CTGCTACT---------TCA---------------------GATGT------TGCTG---CTGCTACCGCTG------C---------------TGCTGCTACCG---------CTGCTGC---TG---------TTACCTCGCTCAGCA------GCAGCA------------------ACAACAGCTGCGGCGAAG------------GCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGASizeHit CountTotal NormTotal
No Reads
droTak1
CAATTTATAACTTTGGCCCCCACAAAGGCGGCCAAAACATCGCCGAACAAGCAACAGACAT------------------TGCAATTG------CAAGTGCAACACGA------GCAGCACGA------GCAGCAGCAGCA---------GCAACA------------GGCCACAAATGCGTCATCGCCGGCGGCA---------------------------------ACAGGCGATG---CAACCACA--------------------------------------------------------------------------------------------------------------------------ACGCCCACAACAATAACAATTGGTGTT------GCTGCT------------GTTAATGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTG---TTGC---TGTT---GGTACTCTTGGTGTTGCTCCCACC------GATG---------------CTGCTGCTGCTG------C---------------TGCTGCT------------------AC---TG---------CTACCTCGCTCAGCA------GCAGCA------------------ACAACAGCTGCGGCGAAG------------GCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGASizeHit CountTotal NormTotal
No Reads
droEle1
CAATTTATAACGCTGGCCCCCACAAAGGCGGCCAAAACATCGCCGAACAAGCAACAAGCAT------------------TGCAATTGCAAGTGCAACAGCAACACGA------GCAGCAAC---------AGCAACAGCAGCAACAGCGGCAACA------------GGCCACAAATGCGTCATCGCCGGCGGCA---------------------------------ACAGGCGATG---CAACCACA--------------------------------------------------------------------------------------------------------------------------ACGCCCACAACAATAACAATTGGTGTT------GCTGAT------------GTTAATGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGCTGCTGC---TGC---------------------------------------------------------------------------------------TGCTGCC---------------ACTGC---TGCT---------G---CGATC---A------ACAGCA------------------ACAACAGCTGCGGCGAAG------------GCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGASizeHit CountTotal NormTotal
No Reads
droRho1
CAATTTATAACGCTGGCCCCCACAAAGACGGCCAAAACATCGCCGAACAAGCAACAAGCAT------------------TGCAATTGCAAGTGCAACAGCAACATGA---------------------GCAGCATCAGCA---------GCAACA------------GGCCACAAATGCGTCATCGCCGGCGGCA---------------------------------ACAGGCGATG---CAACCACA--------------------------------------------------------------------------------------------------------------------------ACGCCCACAACGATAACAATTGGTGTT------GCTGCT------------GTTAATGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTACTACTGC---TGCT---------------------------------------------GC------------TGCT---------------------------------------------GCTGC---TGCT---------GCCGCGCTC---A------ACAGCA------------------ACAACAGCTGCGGCGAAG------------GCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGASizeHit CountTotal NormTotal
No Reads
droFic1
CAATTTATAACGCTGGCCCCCACAAAGGCGGCCAAAACATCGCCGAGCAAGCAACAAGCATTACAATCCCAATCGCAATTGCAATTG------CAATCGCAA------------GTGCA---------ACAACAGCAGCA---------GCAACA------------AGCCACAAATGCGTCATCGCCGGCGGCA---------------------------------ACAGGCGATG---CAACCACA--------------------------------------------------------------------------------------------------------------------------ACGCCCACAACGATAACAATTGGTGTTGCTGCTGGCGTTGCTGTTGCTGCTGTTGATGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGC---TGCTGCTACT---------------------------------GATGT------TGCTG---------------------TTGCTGCTGTTTCTGCTGCTGCTACTG---------CTGCTGC---TG---------CTACCTCGGTC---G------GCGGCA------------------ACAACAGCTGCGGCGAAG------------GCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGASizeHit CountTotal NormTotal
No Reads
droKik1
CAATTTATAACGCTGGCCCCCAGCAAG---------------------------CAGGCAT------------------TGCAAGTG------CAACAGCAAC---------------------------AGCAACAGCA---------GCAACA------------GGCCACAAATGCGTCATCGCCGGCAGCA------GCAGCAGCAGCAGCAGCCGCGGCAGCAACAAGCAATGCGACAACTGCA--------------------------------------------------------------------------------------------------------------------------ACGCCTACAACTTCTGCAACT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGCTCTCAATGTGGCTCCCAGT------CTAGGTGTTGC---TCCC---AGT---CTAGGTGCTAGTCCTACCGCTCTTGATGT------TGTTGCTAC---------------------TGCTGTTAACGCTCCCGC------------------------TCTTGATG--------TTGCTC---A------C-GACCGCGACCACGACGACAACGACAACAGCTGCGGCGAAGGCATCGCCGACGGCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGASizeHit CountTotal NormTotal
No Reads
droAna3
CAATTTATAACTTTGGCCCCCACAAAAGCGACCAAAATATCACCAAGAG---------------------------------GAGTG------CAACAGCAAC------------------------------------------------------------------------ATGCGTCATCGCAATCAGTA---------------------------------TC------TG---CAACTACAACGCCT-----------------------------------ACAACGAATTTGAAAGCAATTAGGCAAGAGGAGAAACAGCAACAGCAACAG----------------------------------------CAACAGCAGCAAG---------------------------------------------------------------------------------AGCA-------------------------------------------------------------------------------------------------GCAAT--------------------------------------------CATTGCATGTTGCTGTTGCTGTTGAGGCAGCAACATCT------GTTGGTG---TTGCTCAT---------ACG---------------------GATGTTGCTATTGC---------TATTGCTGATAGTGTTGC------------TACTGTGGCTAGTGTTGCTGATGGTGT---TGCCGATGTGGAT------------G------TAGACA------------------ACAACAGCTGCG------------------------GCAATAATT-TATCAAAGTTTGCAACAGTATCGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGCTGATGGTGT---TGCC..........................................................................................................................1811.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGC------------TACTGTGGCTAGTGTTGCTGA.......................................................................................................................................2611.001100000
...................................AATATCACCAAGAG---------------------------------GAGTG------CAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
................................................................................................................................................................................................................................................................................................................................................AACAG----------------------------------------CAACAGCAGCAAG---------------------------------------------------------------------------------AGCA-------------------------------------------------------------------------------------------------.................................................................................................................................................................................................................................................................................................................................................................2220.501100000
droBip1
CAATTTATAACTTTGGCCCCCACAAAGGCGGCCAAAATATCACCAA------------CAT------------------------TG------CAACAGCAACATGCGTCATCG----------------------------------------------------------------------CAATTAAAGCA------------------------------------AT------------C----------------------------------------------------------------------------------------------------------------------TGCAACAACGCCTACGAAAG----------------------------------------------------------------------AGAAGCAGCAGCAGCAACAACAGCA-------------------------------------------------------------------------------------------------GCAAT--------------------------------------------CATTGGAT------GTTGCTGTTGAGGTAGCAACATCAGATGTTGCTA---CAGC---TATT---GGTGATAGTGGTGTTGC------------------------------------------------------------------TGGTGTAGCTG---------AT---GT---TGCCGATGTGAATGTAT------------------ACA------------------ACAACAGCTGCG------------------------GCAATAATT-TATCAAAGTTTGCAACAGTATCGASizeHit CountTotal NormTotal
No Reads
dp5
CAATTTATAACGCTGGCCCCCACAAAGGCGGCCAAAACATCGCCAGGGAAGC------------------------------------------------------------------------------AGCAGCAGCAGCAACA---ACCACAGGCGAAATTGGTGGCCACAAATGCGTCATCGCTGGCGGCA------------------------------------GTCGCTG---CAACGACAACGCCA--------------------------------------------------------------------------------------------------------------------ACGCCAACACCTACAACAATTGCTCCT------GCTGCC---------------ACTGCCACTGCCACTACCGCTGCAGCAACA------------------GCAACAGCGATAACAATAGAGCGATCTGTGGCCAGTGTTGATGTTGCAGCCGCAGTCGCTGGGATCGGGATCGAGATCGGCATCGGCATCGACACCAACATCGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAT------------------------------------GACCGAAGCGGCGACGGCAACGGCAACGCCAACAGCTGCGGCGAAG------------GCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATGTTGCAGCCGCAGTCG..............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCATCGGCATCGACACCA.......................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGCAACGCCAACAGCTGCG..........................................................2111.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCTGCGGCGAAG------------GCGTCGGCAA..............................2511.0010000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGATCGAGATCGGCATCGGC.................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
........................................................................................................................................AGCAGCAACA---ACCACAGGCGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCATCGGCATCGACACCAAC.....................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAACAGCTGCGGCGAAG------------GCGTCGGCA...............................2711.0010000001000
........................................CGCCAGGGAAGC------------------------------------------------------------------------------AGCAGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAT------------------------------------GACCGAAGCGGCGACG..................................................................................2111.0010100000000
..................................................GC------------------------------------------------------------------------------AGCAGCAGCAGCAACA---ACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21120.0810000100000
droPer2
CAATTTATAACGCTGGCCCCCACAAAGGCGGCCAAAACATCGCCAGGGAAGC------------------------------------------------------------------------------AGCAGCAGCAGCAACA---ACCACAGGCGAAATTGGTGGCCACAAATGCGTCATCGCTGGCGGCA------------------------------------GTCGCTG---CAACGACAACGCCA--------------------------------------------------------------------------------------------------------------------ACGCCAACACCTACAACAATTGCTCCT------GCTGCC---------------ACTGCCACTG------CCGCTGCAGCAACA------------------GCAACAGCGATAACAATAGAGCGATCTGTGGCCAGTGTTGATGTTGCAGCCGCAGTCGCTGGGATCGGGATCGAGATCGGCATCGGCATCGACACCAACATCGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAT------------------------------------GACCGAAGCGGCGACGGCAACGGCAACGCCAACAGCTGCGGCGAAG------------GCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATCGAGATCGGCATCGGCATCGAC...........................................................................................................................................................................................................................................................................................................................................................................2611.001000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGGATCGGGATCGAGATC..........................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
..............................................................................................................................................................................................CGGCA------------------------------------GTCGCTG---CAACGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
droWil2
ACAGCAACAG------CAGCAACAATGGCAGCAACAACAACAGCAACAA-----CAACTGCAGCAGCAACAAT------TGCAGCAA------CAACAGCAACAGCA------GCAACA---------ACAGCAGCAACA---------ACAACA------------G----------------------------------------------------------------------------------CAGCA-----------------------------------GCAACA-----------------G---------CAGCATCAGCAACAGCAACAGCAGCAGCGAATGCAACAGCA-------ACAGCAACAGCAGCAACAATTGCAGCA------ACAACAACAACAGCAGCAGCAACAACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAC---AGCAACAACA------------------------------------------------------ACAGCAGCAG------C---------------AACAGCAACAA---------CAGCAGC---AGCAGCAGCAACTGCAACA-AC---A------GCAGCA------------------GCAACAGCAACAACAACA------------ACATCAGCAGCAACAGCAACAACAGCAGCAACAGCAACAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................AACAATGGCAGCAACAACAACAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.7014014000
....................................................................................................................................................................................................................................................................................................AACA-----------------G---------CAGCATCAGCAACAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.25100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAGCAGCAACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.20400040
....................................................................................................................................................................................................................................................................................................................................................................................................AATTGCAGCA------ACAACAACAACAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24100.20202000
............................................................................................................................................................................................................................................................................................................................................................................................................CA------ACAACAACAACAGCAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.20400040
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAGCAACAGCAACAACAGCAG............25130.15201010
...................................................................AACAAT------TGCAGCAA------CAACAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.15303000
...................................................................................................................................GCAGCAACA---------ACAACA------------G----------------------------------------------------------------------------------CA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.15300030
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA------------ACATCAGCAGCAACA.........................19200.10200020
....................................................................................................................................................................................................................................................................................................................................................................................................AATTGCAGCA------ACAACAACAACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23100.10101000
.................................................................................................................................................................................................................................................................................................................................................................................................AACAATTGCAGCA------ACAACAACAACAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27100.10101000
.....................................................................................AA------CAACAGCAACAGCA------GCAACA---------A................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10202000
..............................................CAA-----CAACTGCAGCAGCAACAAT------TGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10202000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAC---AGCAACAACA------------------------------------------------------ACAGCAGCA...................................................................................................................................................................................25200.10202000
...................................................................AACAAT------TGCAGCAA------CAACAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.10200020
....................AACAATGGCAGCAACAACAACAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10202000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACA-AC---A------GCAGCA------------------GCA...................................................................18200.10200020
..................................................................................AGCAA------CAACAGCAACAGCA------G...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10202000
...............................................................................TGCAGCAA------CAACAGCAACAGCA------G...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10202000
....................................................................................................................................................................................................................................................................................................................................................................................................AATTGCAGCA------ACAACAACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19130.08100010
........................................................................................................................................................................................................................................................................................................................................................................AGCA-------ACAGCAACAGCAGCAACAATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25160.06100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------ACATCAGCAGCAACAGCAACAA..................23170.06101000
..................................................................................................................................................................................................................................................................................................................................................................TGCAACAGCA-------ACAGCAACAGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24170.06101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC---AGCAGCAGCAACTGCA..............................................................................................................22170.06101000
....................................................................................................................................................................................................................................................................................................................................AGCATCAGCAACAGCAACAGCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23170.06101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACA------------ACATCAGCAGCAACAGC.......................23180.06100100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACA------------ACATCAGCAGCAAC..........................24190.05100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACA------------ACATCAGCAGCAACA.........................25190.05101000
.........................TGGCAGCAACAACAACAGCAACAA-----...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA------------------------------------------------------ACAGCAGCAG------C---------------AACAGCA.....................................................................................................................................................22200.05101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAACAACA------------ACATCAGC................................25200.05101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACA------------ACATCAGCAGCAAC..........................22200.05100010
..AGCAACAG------CAGCAACAATGGCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---AGCAACAACA------------------------------------------------------ACAGCAGCAG------C---------------A...........................................................................................................................................................25200.05100010
................................AACAACAACAGCAACAA-----CAACTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAACAACAGCAG............20200.05101000
...............................................AA-----CAACTGCAGCAGCAACAAT------TG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA-AC---A------GCAGCA------------------GCAACA................................................................20200.05100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACA------------------------------------------------------ACAGCAGCAG------C---------------AA..........................................................................................................................................................19200.05100010
...............................................................................TGCAGCAA------CAACAGCAACAGCA------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
...............................................AA-----CAACTGCAGCAGCAACAAT------T.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
........................................................................T------TGCAGCAA------CAACAGCAACAGCA------G...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAG------C---------------AACAGCAACAA---------........................................................................................................................................21200.05100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACA------------------------------------------------------ACAGCAGCAG------C---------------AA..........................................................................................................................................................20200.05100001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACA------------------------------------------------------ACAGCAGCAG------C---------------AACA........................................................................................................................................................21200.05100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACA------------------------------------------------------ACAGCAGCAG------C---------------AACAG.......................................................................................................................................................22200.05100010
........................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCAGCAACAACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------....................................................................................................................................................................................................................................................................23200.05100010
...................................................................AACAAT------TGCAGCAA------CAACAGCAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
.........................TGGCAGCAACAACAACAGCAACAA-----CAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
...................CAACAATGGCAGCAACAACAACAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
.................AGCAACAATGGCAGCAACAACAACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAG------C---------------AACAGCAACAA---------CAGCAG..................................................................................................................................24200.05100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA-AC---A------GCAGCA------------------GCAACAGC..............................................................21200.05101000
................................................................................................................................ACAGCAGCAACA---------ACAACA------------G----------------------------------------------------------------------------------CA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
.....................ACAATGGCAGCAACAACAACAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
...................................................................AACAAT------TGCAGCAA------CAACAGCAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
......................................AACAGCAACAA-----CAACTGCAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
.......................AATGGCAGCAACAACAACAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.......CAG------CAGCAACAATGGCAGCAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
................................AACAACAACAGCAACAA-----CAACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
..........................GGCAGCAACAACAACAGCAACAA-----...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
........AG------CAGCAACAATGGCAGCAACAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCAGCAGCAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
..........................................................................................................................................................................................................................................................................................................................................AGCAACAGCAACAGCAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000
.........................TGGCAGCAACAACAACAGCAACAA-----CAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAGCAGCAACAGCAAC..24200.05100010
...........................................................................................................................................................................................................................................................................................................................................................................................................GCA------ACAACAACAACAGCAGCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
..........................GGCAGCAACAACAACAGCAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.......................................ACAGCAACAA-----CAACTGCAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
............................................................................................................................................................................................................................................................................................................................................................................................................CA------ACAACAACAACAGCAGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
........................................................................T------TGCAGCAA------CAACAGCAACAGCA------GC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
................................AACAACAACAGCAACAA-----CAACTGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAC---AGCAACAACA------------------------------------------------------ACAGC.......................................................................................................................................................................................20200.05101000
............................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAACAACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAC---A...........................................................................................................................................................................................................................................................25200.05100100
.....................................................................................................................CA---------ACAGCAGCAACA---------ACAACA------------G----------------------------------------------------------------------------------CAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------AACAGCAACAA---------CAGCAGC---AGCAG.........................................................................................................................24200.05101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA------------ACATCAGCAGCAAC..........................19200.05100010
..................................................................................................................CAACA---------ACAGCAGCAACA---------ACAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
...................................................................AACAAT------TGCAGCAA------CAACAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
..............................................CAA-----CAACTGCAGCAGCAACAAT------TGCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
.......................AATGGCAGCAACAACAACAGCAACAA-----C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
...................................................................................................CAACAGCA------GCAACA---------ACAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG------C---------------AACAGCAACAA---------CAGCAGC---AGC...........................................................................................................................26200.05101000
..................................................................CAACAAT------TGCAGCAA------CAACAGCAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
......................................................................AAT------TGCAGCAA------CAACAGCAACAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
............................................AACAA-----CAACTGCAGCAGCAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
...................................AACAACAGCAACAA-----CAACTGCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.........................................................................................................................................ACA---------ACAACA------------G----------------------------------------------------------------------------------CAGCA-----------------------------------GCAACA-----------------G---------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
.................................................................................................................................................................................................................................................................................................................................................................................................AACAATTGCAGCA------ACAACAACAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-AC---A------GCAGCA------------------GCAACAGC..............................................................18200.05100010
.........................................AGCAACAA-----CAACTGCAGCAGCAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
.......................AATGGCAGCAACAACAACAGCAACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
.....................ACAATGGCAGCAACAACAACAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
.....................................CAACAGCAACAA-----CAACTGCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAGCAGCAACAACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------....................................................................................................................................................................................................................................................................22200.05100010
....................................................................................CAA------CAACAGCAACAGCA------GCAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
..................................................................................................................................AGCAGCAACA---------ACAACA------------G----------------------------------------------------------------------------------CAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACA------------ACATCAGCAGC.............................22200.05101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAGCAGCAAC........18200.05100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---AGCAACAACA------------------------------------------------------ACAGCAGCA...................................................................................................................................................................................22200.05101000
..................................CAACAACAGCAACAA-----CAACTGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
.............................AGCAACAACAACAGCAACAA-----CAACTGCAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.05101000
...........................................................................................................................................A---------ACAACA------------G----------------------------------------------------------------------------------CAGCA-----------------------------------GCAACA-----------------G---------CA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.....................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAACAATTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
.....................................................................................................................................................................................................................................................................................................................................................................AACAGCA-------ACAGCAACAGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
...............................................................................TGCAGCAA------CAACAGCAACAGCA------GC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
.......................AATGGCAGCAACAACAACAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
droVir3
CAATTTATAACGTTGGCCCCCACTAAGGCGGCCAT--------------------------------------------TGC------------------------------------------------AGCGGCAGCG---------GCCAAA-ACGTTGCCGGCGGCCACAAATGCGTCATCACCGGCAACGACTGCAATTGCAACA---GTGGCCGCAGCAGCATCAGCAATTG---CAACCACAGCAAC--------------------------------------------------------------------------------------------------------------GGCGACAACGCCTACAACAGCAACAG---------------------------------------------------CAGCAGCTGCAGCA------------------GCGGCAGCAATAACAATAG-------------------------------------------------------------------------------------------------CAACAACTGGCGATGAGCAGAAGATTCAGCCACGATCTGTT---------GCTGCTGTCGACGCG---------------GCCG---TTGC---TGCT---------------------------------------------GC---------TGCTGCT---------------------------------------------GCTGC---TGCT---------G---TCGAC---AATGAGCGCAGCA------------------ACAACAGCTGCGGCGAAG------------GCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCGGCGAAG------------GCGTCGGCA...............................2112.002000000000000000000100000000000000000000000000000000000000000100
...................................................................................................................................................................................GTCATCACCGGCAACGACTGCAAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACTGGCGATGAGCAGAAGA............................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCCACGATCTGTT---------GCTGCT............................................................................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................CTACAACAGCAACAG---------------------------------------------------CAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.141001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAG---------------------------------------------------CAGCAGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000100000000000000000000000000000000000000000000000
droMoj3
CAATTTATAACGCTGGCCCCCACTAAGGCGGCCAATGCG--------------------------------------------------------------------------------------------GCGGCAGC----------------------------GGCCACAAATGCGTCATCGCCTGCAGCA---------------------------------GCAGCGG------------------CAGCAGCAGCAACGGCAGCAATTGCAACCGCCGCAAC--------------------------------------------------------------------------AGCAGCAACGCCTACAACAAC---------------------------------------------------------------------AGAAGCGGCAACAGCAA------------CAG----------------------------------------------------------------CAACATCAACAGCAACATCAACAGCAGCAATAACAATAGCAACAACTGGCGATGAGCAAACGTCGCAGTTACGA------------------------------------------------------GC---TGTT---------------------------------------------GCTG---CTGCTACGACAG------C---------------GACGGCTGCTG---------CGGCTGC---TGTT---------G---TCGAC---A------GCAGCA------------------ACAACAGCTGCGGCGAAG------------GCGTCGGCAATAATT-TATCAAAGTTTGCAACAGTATCGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................................................................................................................................................................................................................................................................ATTGCAACCGCCGCAAC--------------------------------------------------------------------------AGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
.........................................................................................................................................................................................................................................GG------------------CAGCAGCAGCAACGGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.111100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACATCAACAGCAGC...............................................................................................................................................................................................................................................................................................................................................................21150.071100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACATCAACAGCAG................................................................................................................................................................................................................................................................................................................................................................19190.051100000
.................................................................................................................................................................................................CA---------------------------------GCAGCGG------------------CAGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACATCAACAGCA.................................................................................................................................................................................................................................................................................................................................................................18200.051000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------CAG----------------------------------------------------------------CAACATCAACAGCAACA..........................................................................................................................................................................................................................................................................................................................................................................21200.051100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------CAG----------------------------------------------------------------CAACATCAACAGCA.............................................................................................................................................................................................................................................................................................................................................................................18200.051000010
droGri2
CAATTTATAACGCTGGCGGCCACTAAAGCAGCAGCAACA------------------------------------------------------------------------------------------------------------------CT------------GGCCACAAATGCGTCATCAACAACTGCA------GCTGCAACAGCAGCAACAGTAGCA---ACAGCTACCA---CAACGACAACGCCT-----------------------------------ACAACA-----------------C---------AAACACCAACAGCAACAG----------------------------------------CAACAACAACTGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGACGATCAGACGACACAGCAACAATCTGTGGCG------ACTGTTGCTGATGCTTCTGCTGCT---GTTG---------CTGTTGCTGTTGGTGTTGGGGGTGTTGGCGTTGTCGTTGTGGTGGC------TGTTGTTGG---------------------AGTTGTTGCTGTTGCAGC------------------------TGTAGTT------------------G------TTGATG------------------A------------------------------------------------CGCGGTTGTGGTTGGTGTTGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.........................................................................................................................................................CT------------GGCCACAAATGCGTCATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110

Generated: 05/18/2015 at 11:10 AM