ID:

dsi_536

 Coordinate:

x:6064014-6064163 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.69 -4.69

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
AT_richLow_complexityLow_complexity+

Sense Strand Reads

GGGAAATGAGGGGGAAAACCCCGAGACGCCCGAGAGCTCAGGGACCCCTGGTAAGGCTTGAATTCAACCAGTAGTAGGCAAAAAAAAAATATATAAAAAAAAAAAACAATAAAATCAACAAACTCTGTACACCTAACTATGCTATCTTTACTTCTTTATTTTTTGGATTTTTTTGCAAATAAATATACTTGAAAACTGTTTACCAAAACCGCAACTCTGAAATGTTCAATGTTCAATGTCTTGACCAAGC
****************************************************.((................(((((((.....................................................)))).)))..))*********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M024
male body		 M053
female body
 M023
head
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553487
NRT_0-2 hours eggs
...................................................................................................................CAACAAACTCTGTACACCTAACTATGCT........................................................................................................... 28 0 1 3.00 3 3 0 0 0 0 0 0 0
...................................................................................................................CAACAAACTCTGTACACCT.................................................................................................................... 19 0 1 3.00 3 2 0 0 1 0 0 0 0
.................................................................................................................................................CTTTACTTCTTTATTTTTTGGATT................................................................................. 24 0 1 2.00 2 2 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GATGATCAATGTCTTGACC.... 19 2 1 2.00 2 0 2 0 0 0 0 0 0
........................................................................................................................................................................................................TACCAAAACCGCAACTCTGAAATG.......................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0
...............................................................................................................AAATCAACAAACTCTGTACACCG.................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0 0 0 0
..................................................................................................................TCAACAAACTCTGTACACC..................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................................................................................ATAAATATACTTGAAAACTGTTTACC.............................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0
.................................................................................................................ATCAACAAACTCTGTACACCG.................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0
................................................................................................................AATCAACAAACTCTGTACACCTAACT................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................................................................AATCAACAAACTCTGTACACCT.................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0
...................................................................................................................CAACAAACTCTGTACACCTAACT................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0 0 0
.....................................................................................................................................TAACTATGATATCGTTACTTCAT.............................................................................................. 23 3 1 1.00 1 0 0 0 0 0 1 0 0
.........................................................................................................................................................................................TACTTGAAAACTGTTTACC.............................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0
..........................................................................................................CAATAAAATCAACAAACTCTGTACACC..................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0
...........................................................................................................................TCTGTACACCTAACTATGCT........................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................................................................................................CAATAAAATCAACAAACTCTGTACACCT.................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0
..........................................................................................................CAATAAAATCAACAAACTCTGG.......................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0
....................................................................................................................AACAAACTCTGTACACCT.................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0
...........................................................................................................................................................................................CTTGAAAACTGTTTACCAAAACCGCAA.................................... 27 0 1 1.00 1 0 0 1 0 0 0 0 0
....................................................AAGGCTTGAATTCAACCAGT.................................................................................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0 0 0
.......................................................................................................................AAACTCTGTACACCTAACT................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0 0
................................................................CAACCAGTAGTAGGCAAAAAA..................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
..............................................................................................................................................................................................................AACCGCAACTCTGAAATGTTCAATG................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
..................................................................................................................TCAACAAACTCTGTACACCTA................................................................................................................... 21 0 1 1.00 1 0 0 0 0 1 0 0 0
.............................................................................................................................................................................................................................ATGTTCAATGTTCAATGTCT......... 20 0 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................................ATAAAATCAACAAACTCTGTACACC..................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0
..GAAATGAGGGGGAAAACCCCGAGA................................................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 1 0 0 0 0 0
..................................................................................................................TCAACAAACTCTGTACACCTAAA................................................................................................................. 23 1 1 1.00 1 0 0 0 1 0 0 0 0
.......................................................................................................................................................................................................TTACCAAAACCGCAACTCTGAAATGTTC....................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0
................................................................................................................................................................................................................CCGCAACTCTGAAATGTTCAATGTT................. 25 0 1 1.00 1 0 1 0 0 0 0 0 0
................................................................................................................AATCAACAAACTCTGTACACC..................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
...................................................TAAGGCTTGAATTCAACCAGTAGTAGGCAA......................................................................................................................................................................... 30 0 1 1.00 1 0 0 0 0 0 0 1 0
........................GACGCCCGAGAGCTCAGGGACCCCTG........................................................................................................................................................................................................ 26 0 1 1.00 1 0 0 1 0 0 0 0 0
..............................................................................................................AAAATCAACAAACTCTGTACACCT.................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0
........................................GCGACCCCAGGTCAGGCTTGA............................................................................................................................................................................................. 21 3 2 0.50 1 0 0 0 0 1 0 0 0
......................................................................GTACTAGGCAAAAAAAAAATT............................................................................................................................................................... 21 2 2 0.50 1 0 0 0 0 1 0 0 0
...................................................................................................................................................................................................................................GATGATCAATGTCTTGACCG... 20 3 4 0.25 1 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................ACTTGGAAACTGTTTAC............................................... 17 1 4 0.25 1 0 0 0 0 0 0 0 1
..................................................................................................................................................TTTAATTCTAGATTTTTTGGAT.................................................................................. 22 3 10 0.10 1 0 0 0 0 0 1 0 0
....................................................................................................................AAGGAACTCTGTACACTTA................................................................................................................... 19 3 17 0.06 1 0 0 1 0 0 0 0 0
..........................................GACTCCTGCTAAGGCT................................................................................................................................................................................................ 16 2 20 0.05 1 0 0 0 0 1 0 0 0
...............................................CTCGTGAGGCTTGAAT........................................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 1 0
.....................................................................................................................................................................................................GTTTAACAAAACCGGAA.................................... 17 2 20 0.05 1 0 0 0 0 0 1 0 0

Anti-sense strand reads

CCCTTTACTCCCCCTTTTGGGGCTCTGCGGGCTCTCGAGTCCCTGGGGACCATTCCGAACTTAAGTTGGTCATCATCCGTTTTTTTTTTATATATTTTTTTTTTTTGTTATTTTAGTTGTTTGAGACATGTGGATTGATACGATAGAAATGAAGAAATAAAAAACCTAAAAAAACGTTTATTTATATGAACTTTTGACAAATGGTTTTGGCGTTGAGACTTTACAAGTTACAAGTTACAGAACTGGTTCG
***********************************************************************************************************.((................(((((((.....................................................)))).)))..))**************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 GSM343915
embryo
..................................................................................................................AGTTGTTTGAGACATGTGGATTGAT............................................................................................................... 25 0 1 2.00 2 2 0 0 0 0 0 0
....................................................................................................................................................................................................................................TACAAGTTGCAGAACGGGT... 19 2 1 1.00 1 0 0 0 1 0 0 0
..............................................................................................................................................................................................................................ACAAGTTACAAGTTACAGAAC....... 21 0 1 1.00 1 0 1 0 0 0 0 0
................................................................................................................................................................................................................................AAGTTACAAGTTACACCCCTGGT... 23 3 1 1.00 1 0 0 0 0 1 0 0
.....................................................TCCGAACTTAAGTTGGTCATCAT.............................................................................................................................................................................. 23 0 1 1.00 1 0 0 1 0 0 0 0
..........................................................................................................GGTTTTTTAGTTGTTTTAGACAT......................................................................................................................... 23 3 2 0.50 1 1 0 0 0 0 0 0
.......................................................CGAACTTAAGTAGGTCATC................................................................................................................................................................................ 19 1 2 0.50 1 0 1 0 0 0 0 0
.............................................................................................................................................................................................................................TCCAAGTTACAAGTCACAG.......... 19 2 4 0.25 1 0 0 0 0 0 1 0
.............................................................................................ATTTTTTTTTTTTGTTTTTTTGGTTGTAT................................................................................................................................ 29 3 5 0.20 1 0 0 1 0 0 0 0
....................................................................................................................................................................................................AAAAATGGTTTTGGCGAT.................................... 18 2 10 0.10 1 0 0 0 1 0 0 0
.................................................................................................................TAGTTCTTTGAGACA.......................................................................................................................... 15 1 13 0.08 1 0 0 0 1 0 0 0
.......................................................................................................................................................AAGAAGTAAAAAACCTA.................................................................................. 17 1 14 0.07 1 0 0 1 0 0 0 0
.............................................................................................ATTTTTTTTTTTTATTATGTCAGT..................................................................................................................................... 24 3 15 0.07 1 0 0 0 0 1 0 0
.............................................................................................................................................................................................................................TCCGAGTTACAAGTCACAG.......... 19 3 16 0.06 1 0 0 0 0 1 0 0
.......................................................................................TTAGATCTTTTTTTTTTTTGTCAT........................................................................................................................................... 24 3 16 0.06 1 0 0 0 0 1 0 0
.........................................................................................................................................................................................................TGGTTTTGGCGTGGCGA................................ 17 2 17 0.06 1 0 0 0 1 0 0 0
.................................................................TTGGTCTACATCCGTTTCTT..................................................................................................................................................................... 20 3 17 0.06 1 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 x:6063964-6064213 + dsi_536 GGGA------------A-ATGAGG------GGGAAA------------------------------------------ACCCCG------AGAC----------GCCCGAGAGCTCAGG---GACCCCTGGTAAGGCTTGAATTCAAC--CAGTA--------GTAG-GCAAAAAA-AA--------------AAT-----------------A-T--------------ATAAAAAAAAAA-------------A-A-------------------------CAATAAAA-----TCAACAAACTCTGTACACC--TAACTA-----TGCTAT--------CTTTAC-TT----------CT---TT--AT-TTTTTGG-A--TTTTTTTGCAAATAAATATACTTGAAAACTGTTTA----------------------CCAA------AACCGCAAC-TCTGAAATGTTCAATGTTC-AATGTCTTGACCA---------------AGC---
droSec2 scaffold_4:343091-343334 - dse_1266 GGGA------------A-ATGAGG------GGGAAA------------------------------------------ACCCCG------AGAC----------GCCCGAGAGCTCAGG---GACCCCTGGTAAGGCTTGAATTCAAC--CAGTA--------GTAG-GCAAAAAA-AA--------------AA--------------------------------------AAAGAAAAA-------------A-A-------------------------CAATAAAA-----TCAACAAACTCTGTACACC--TAACTA-----TGCTAT--------CTTTAC-TT----------CT---TT--AT-TTTTTGG-A--TTTTTTTGCAAATAAATATACTTGAAAACTGTTTA----------------------CCAA------AACCGCATC-TCTGAAATGTTCAATGTTC-AATGTCTTGACCA---------------AGC---
dm3 chrX:6449243-6449508 + GGGA------------A-ATGAGG------GGGAAA------------------------------------------ACCCCG------AGAC----------GCCCGAGAGCTCAGG---GACCCCTGGTAAGGCTTGAATTCAAC--CACTACCCGA-AAGTAG-GCAAAAAA-AA--------------AA--AAATAAATACAAAA--------------ATAA-------AAAAAA-------------A-A-------------------------CAATAAAA-----TCAAGAAACTCTGTACACC--TAACTA-----TGCTAT--------CTTTAC-TT----------CT---TT--AT-TTTTTGG-A--TTTTTTTGCAAATAAATATACTTGAAAACTGTTTA----------------------CCAA------AACCGCAAC-TATGAAATGTTCAATGTTC-AATGTCTTGACCA---------------AGC---
droEre2 scaffold_4690:15389147-15389393 + GGGA------------A-ATGAGG------GGGAAA------------------------------------------ACCCCG------AGAC----------GGCCGAGAGCTCAGG---GACCCCTGGTAAGGCTTGAATTCAAC--CACTACCCGA-AAGTAG-GCAAAAAA-AA--------------AA-----------------------------------ACAAAAAAAAAA-------------C-A-------------------------CAATCAAA-----TCAAGAAACTCTGTACACC--TAACTA-----TGCTAT--------CTTTAC-TT----------CT---TT--A--TTTTTGG-A--TT-TTTCGCAAATAAATATACTTGAAAACTGTTTA----------------------CCAA------AACTGCAAC-TCTGAAATGTTCA--------ATGTCTTGACCA---------------AGCGC-
droYak3 X:2424936-2425201 + GGGA------------A-ATGAGG------GGGAAA------------------------------------------ACCCCG------AGAC----------GCCCGAGAGCTCAGG---GACCCCTGGTAAGGCTTGAATTCAAC--CACTACCCGA-AAGTAG-GCAAAAAA-AA--------------A-T------------------AAAATTAAAAAATAAAACAAA----CAA-------------A-A-------------------------CAATAAAA-----TCAAGAAACTCTGTACACC--TAACTA-----TGCTAT--------CTTTAC-TT----------CT---AC--A--TTTTTGG-A--TTTTTTTGCAAATAAATATACTTGAAAACTGTTTA----------------------CCAA-A----AACCGCAAC-TCTGAAATGTTCAATGTTC-AATGTCTTGACCA---------------AGC---
droEug1 scf7180000409522:128211-128487 + GGGA------------A-ACGAGG------GGGAAA------------------------------------------CCCCAG------AGAC----------GCCCGAGAGCTCAGG---GACCCCTGGTAAGGCTTGAATTCAAC--CACTACCCGAAAAATTG-CCAAAAA---------------GATA-T------------------ATAATAAAAAAAAAAAACAAAAAAAAA-----------------------TAATATAT-------------ACAAAA-----TCAAGAAACTCTGTACACC--TAACTA-----TGCTAT--------CTATACTTT----------CT---TA--ATTTTTTTGG-A--TTTTTTTGCAAATAAATATACTTGAAAACTGTTTA----------------------CCAA------AACCGCAAC-TCTGAAATGTTCAATGTTC-AATGTCTTGACCA--------------AAGC---
droBia1 scf7180000301760:2951384-2951627 - GGGA------------A-GCGAGG------GGGAAA------------------------------------------GCCCCG------AGAC----------GCCCGAGAGCTCAGG---GACCCCTGGTAAGGCTTGAATTCAAC--CACTACCCGGCCAATTG-CCAAAAGAA-ATC------------AAT---------------------------------------------------------AAA----------------------------AATCAAA-----TCGAGA-ACTCTGTACACC--TAACTA-----TGCTAT------T-CTATAC-TT----------CT---T---AT-TTTTTGG-A--TT--TTTGCAAATAAATATACTTGAAAACCGTTTA----------------------CCAA------AACCGCAAC-TCTGAAATGTTCAATGTTC-AATGTCTTGACAA--------------AAGC---
droTak1 scf7180000414549:60935-61180 + GGGA------------A-ACGAGG------GGGAAA------------------------------------------GCCCCG------AGAC----------GCCCGAGAGCTCAGG---GACCCCTGGTAAGGCTTGAATTCAACTCCACTACCCGACAAATTGACCAAAAAAA-A----------A---AAT-----------------A-------------------------------------------------------------------------TATA-----TGAAGAAACTCTGTACACC--TAACTACTA--TGCTAT--------CTATAC-TT----------CT---TT--A--TTTTTGG-A--TTTTTTTGCAAATAAATATACTTGAAAACTGTTTA----------------------CCAA-A----AACCGCAAC-TCTGAAATGTTCAATGTTC-AATGTCTTGACCA---------------AAA---
droEle1 scf7180000491044:335334-335581 + GGGA------------A-ACGAGG------GGGAAA------------------------------------------ACCCCG------AGAC----------GAACGAGAGCTCAGG---GACCCCTGGTAAGGCTTGATTTCAAC--CACTCCCCGA-AAATTG-CCAAAATAA-A----------------TTT-------------------------------------------------------AAAAA-------------------------CA--AAAA-----TCAAGAAACTCTGTACACC--TAACTA-----TGCTAT-----AT-CTATAC-TT----------CT---TT--ATTTTTTTGG-A--TTTGTTTGCAAATAAATATACTTGAAAACTGTTTA----------------------CCAA------AACCGCAAC-TCTGAAATGTTCAATGTTCCTATGTCTTGACCA---------------AGC---
droRho1 scf7180000776942:18986-19226 + TGGA------------A-ACGAGG------GGGAAA------------------------------------------ACCCCG------AGAC----------GCCCGAGAGCTCAGG---GACCCCTGGTAAGGCTTGAATTCAAC--CACTACCCGA-AAATTG-CCAAAAGAA-A----------------T---------------------------------------------------------AAA-A-------------------------AA--AAAA-----TCAAGAAACTCTGTACACC--TAACTA-----T-CTAT--------CTATAC-TT----------CT---TT--AT-TTTTTGG-A--TTTTTTTGCAAATAAATATACTTGAA-ACTGTTTA----------------------CCAAAA----AACCGCAAC-TCTGAAATGTTCAATGTTC-AATGTCTTGACCA---------------AGC---
droFic1 scf7180000454072:953886-954121 - GGGA------------A-GCGAGG------GGGAAA------------------------------------------ACCCCG------AGAC----------GCCCGAGAGCTCAGG---GACCCCTGGTAAGGCTTGAATTCAAC--CACTACCCGA-A-CTTG-CCAAAAGAA-A--------------AAT---------------------------------------------------------AAA-A-------------------------CA--AAAA---T-TTAAGAAACTCTGTACACC--TAACTA-----TTCTAT--------CTATAC-TT----------CT---T--------TTTTG-A--TT--TTTGCAAATAAATATACTTGAAAACTGTTTA----------------------CCAA------AACCGCAAC-TCTGAAATGTTCAATGTTC-AATGTCTTGACCA---------------AGC---
droKik1 scf7180000302517:10502-10732 - GGGC------------C-AAGAGG------GGGAAGAAGAAGCCCCA------------------------------ATCGCCG------AGTTGGC-------AGACGGGAGCTCTGGGATGACCCCTGGTAAGGCTTGAAAACAAC--AACT---CGA----TCG-GCAAA---------------------------------------------------------------------------------------------------------------GATAAAA-----TCAAGAAACTCTGTACACTTTTAACTA-----TGCTAT--------AT-TAC-TT----------CT---TT--TT-ATTTTGG-A--ACTGTTTGCAAATAAAAATAAAAAATAAACCTTTA----------------------A-AA------AACC---AA-ACTGAAATGTTCAAACACG-AAA---------------------------CT-G
droAna3 scaffold_12929:3015610-3015836 + GGGA------------A-ACGAGGGCTCCGGGGAAG------------------------------------------TGCCCGTGGGTGAG-------AGCACCCCCGAGAA---------GTCCCCTGGTAAGGCTTGAA-----C--CACCAC----------------A------TCA-AGTTAAAA-------------------------------------------------------GTCTA----------------------------------TTTAGA-----ACATGAAACTCTGTACACC--TAACTA-----TGCTAT--CGATTACTTTAC-TT----------CT---TTTTAT-TTTTTGG-AA-CTATTTTGCAAATAAATATA-------------------------------------TCGA------AACCGCAAT-CCTGAAATGTTCA--------ATGTCTTGACCA---------------AGCACC
droBip1 scf7180000395360:26683-26912 - GGGA------------A-ACGAGG------GGGAAG------------------------------------------TCCCTGTGGGCGAC-CACCAGACCAACCCCGAGAAAT---------CCCCCGGTAAGGCTTGAATT----------------------G-CCACATGAA-A------TTAC-A-------------------------------------------------------GTCTA----------------------------------TTTAAA-----ACATGAAACTCTGTACACT--TAACTACTATATGCTATATCGATTACTATAC-TT----------CT---TTTTAT-TTTTTGG-AA-CTATTTTGCAAATAAATAAA-------------------------------------TCAA------AACCGCAAT-TCTGAAATATTCA--------ATGTCTTGACCA---------------AGC---
dp5 XL_group1a:3547254-3547501 - GGGACCCGAAACCCTCA-GCGAGG------GGGAAC---------------------------------------------CCG------TGC-------------CCCGTCCCTCAGA---GAGCGTTGGTAAGGCATCT--------------CCCGA-A-----------------TAAACGTTAAAGATA-TTGAACAACCCCCAAAGC--------------AA-------CC----------------------------------------AGC-------AACCAATC-------TTTTTGTAAA----TGCCTA-----TGCTCA-----TT-ATTTTC-TT----------TTTGT-T--T--TCTTTCGAAACTGTTTTTGCAAATAAATATAATA----------------------------------CCGAAAAAACAAATGCAATGTTTGAAATGT-------TC-AATGTCTTGACCCCCAAC---------GTGC---
droPer2 scaffold_11:86072-86328 - GGGACCCGAAACCCTCA-GCGAGG------GGGAAC---------------------------------------------CCG------TGC-------------CCCGTCCCTCAGA---GAGCGTTGGTAAGGCATCT--------------CCCGA-A-----------------TAAACGTTAAAGATA-TTGAACAACCCCCAAAGC--------------AA-------CC----------------------------------------AGC-------AACCAATC-------TTTTTGTAAA----TGCCTA-----TGCTCA-----TT-ATTTTC-TT----------TTTGT-T--T--TCTTTCGAAACTGTTTTTGCAAATAAATATAATA----------------------------------CCGAAAAAACAAATGCAATGTTTGAAATGT-------TC-AATGTCTTGACCCCCAACGTGCACCATACAC---
droWil2 scf2_1100000004515:4382638-4382946 + CGGTCCG-------TCCGTTAAGG------AGGTCC------CAGATCCGGTTCCGGTT---------CCGGTAACGAATGCAA------CAGC----------GGTGACAAGTTCAGA---GACCGTTGGTAAGGCATGAATCC------------CGA-A-ATAA-ACCACACC-AA--------------CAATACACACACACA----------------------------CACACA-------------C-A-------------------------CACATACA-----TATATACACTTTGTAACTA--TACCAATTA--CTCTAT--------T--TAG-TATTTAAAAACTAT---TT--CTGTTTTTGG-A--GT-ACTTGCAAATAAAAACTTTTT---ACTGATTACAAAAACAAAACAAAAAATAAAT-AA--AACCAAATGCAAT-CTTGAAATATTCA--------ATATTTTGCTCA---------------AGC---
droVir3 scaffold_12928:486801-487071 + dvi_8279 GGGTCCG-------GCCGCCGATG------CGGATG------CGGCTCAAAACGCGGCTCAAACCGAAGCGGCCAGCATTGCCA------AGGC----------GGTGACAAGTACTGA---AACCGTTGGTAAGGCCCAAAAGGCA---------------------ACAACAGC-AA--------------CA-----------------------------------ACAACATAAAATCTAAATCAAATAAA-ACACAAACCACAAATCGAGCAAGCAACTATTACT-----TCAACT--TCTTCTACTTG--CAACCA-----AACAC-------C-GTT-TTTTG----------TTTGT-T--T----TTT---T--TTTTTTTTTTAATTTATATAGAGAAAATTTATTTT----------------------TTGA------AA----------------------------------------------------------C---
droGri2 scaffold_15203:6910775-6910871 + -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-TT----------TT---TT--TT-TTTTTGG-A--AC--TTTGCAAATAAAAACTGTTATACAAAATACA--------------------AACAAA------AAATGCGAA-TGTGATATGTTCTATGT----ATGGCCTACACA---------------CAC---

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GGGA------------A-ATGAGG------GGGAAA------------------------------------------ACCCCG------AGAC----------GCCCGAGAGCTCAGG---GACCCCTGGTAAGGCTTGAATTCAAC--CAGTA--------GTAG-GCAAAAAA-AA--------------AAT-----------------A-T--------------ATAAAAAAAAAA-------------A-A-------------------------CAATAAAA-----TCAACAAACTCTGTACACC--TAACTA-----TGCTAT--------CTTTAC-TT----------CT---TT--AT-TTTTTGG-A--TTTTTTTGCAAATAAATATACTTGAAAACTGTTTA----------------------CCAA------AACCGCAAC-TCTGAAATGTTCAATGTTC-AATGTCTTGACCA---------------AGC---SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................................................................................................................................................................................................CAACAAACTCTGTACACC--TAACTA-----TGCT.......................................................................................................................................................................................2813.00300300000000000000
.........................................................................................................................................................................................................................................................................................................CAACAAACTCTGTACACC--T.....................................................................................................................................................................................................1913.00310200000000000000
......................................................................................................................................................................................................................................................................................................................................................CTTTAC-TT----------CT---TT--AT-TTTTTGG-A--TT.................................................................................................................................2412.00200200000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................TA----------------------CCAA------AACCGCAAC-TCTGAAATG.............................................2411.00110000000000000000
................................................................................................................................................................................................................................................................................................AAA-----TCAACAAACTCTGTACACC--G.....................................................................................................................................................................................................2311.00101000000000000000
........................................................................................................................................................................................................................................................................................................TCAACAAACTCTGTACACC--......................................................................................................................................................................................................1911.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................ATAAATATACTTGAAAACTGTTTA----------------------CC........................................................................2611.00101000000000000000
..................................................................................................................................................................................................................................................................................................A-----TCAACAAACTCTGTACACC--G.....................................................................................................................................................................................................2111.00101000000000000000
.................................................................................................................................................................................................................................................................................................AA-----TCAACAAACTCTGTACACC--TAACT.................................................................................................................................................................................................2611.00100100000000000000
.................................................................................................................................................................................................................................................................................................AA-----TCAACAAACTCTGTACACC--T.....................................................................................................................................................................................................2211.00101000000000000000
.........................................................................................................................................................................................................................................................................................................CAACAAACTCTGTACACC--TAACT.................................................................................................................................................................................................2311.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TACTTGAAAACTGTTTA----------------------CC........................................................................1911.00101000000000000000
...........................................................................................................................................................................................................................................................................................CAATAAAA-----TCAACAAACTCTGTACACC--......................................................................................................................................................................................................2711.00100100000000000000
.................................................................................................................................................................................................................................................................................................................TCTGTACACC--TAACTA-----TGCT.......................................................................................................................................................................................2011.00100100000000000000
...........................................................................................................................................................................................................................................................................................CAATAAAA-----TCAACAAACTCTGTACACC--T.....................................................................................................................................................................................................2811.00101000000000000000
...........................................................................................................................................................................................................................................................................................CAATAAAA-----TCAACAAACTCTGG.............................................................................................................................................................................................................2211.00101000000000000000
..........................................................................................................................................................................................................................................................................................................AACAAACTCTGTACACC--T.....................................................................................................................................................................................................1811.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................CTTGAAAACTGTTTA----------------------CCAA------AACCGCAA........................................................2711.00100010000000000000
....................................................................................................................................AAGGCTTGAATTCAAC--CAGT.........................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
.............................................................................................................................................................................................................................................................................................................AAACTCTGTACACC--TAACT.................................................................................................................................................................................................1911.00100100000000000000
................................................................................................................................................CAAC--CAGTA--------GTAG-GCAAAAAA-..................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCGCAAC-TCTGAAATGTTCAATG......................................2511.00100100000000000000
........................................................................................................................................................................................................................................................................................................TCAACAAACTCTGTACACC--TA....................................................................................................................................................................................................2111.00100000001000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTCAATGTTC-AATGTCT...........................2011.00101000000000000000
.............................................................................................................................................................................................................................................................................................ATAAAA-----TCAACAAACTCTGTACACC--......................................................................................................................................................................................................2511.00100100000000000000
..GA------------A-ATGAGG------GGGAAA------------------------------------------ACCCCG------AGA......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
........................................................................................................................................................................................................................................................................................................TCAACAAACTCTGTACACC--TAAA..................................................................................................................................................................................................2311.00110000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TTA----------------------CCAA------AACCGCAAC-TCTGAAATGTTC..........................................2811.00101000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCAAC-TCTGAAATGTTCAATGTT....................................2511.00101000000000000000
.................................................................................................................................................................................................................................................................................................AA-----TCAACAAACTCTGTACACC--......................................................................................................................................................................................................2111.00100100000000000000
...................................................................................................................................TAAGGCTTGAATTCAAC--CAGTA--------GTAG-GCAA.......................................................................................................................................................................................................................................................................................................................................................3011.00100000010000000000
...........................................................................................GAC----------GCCCGAGAGCTCAGG---GACCCCTG.................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
...............................................................................................................................................................................................................................................................................................AAAA-----TCAACAAACTCTGTACACC--T.....................................................................................................................................................................................................2411.00110000000000000000
droSec2
GGGA------------A-ATGAGG------GGGAAA------------------------------------------ACCCCG------AGAC----------GCCCGAGAGCTCAGG---GACCCCTGGTAAGGCTTGAATTCAAC--CAGTA--------GTAG-GCAAAAAA-AA--------------AA--------------------------------------AAAGAAAAA-------------A-A-------------------------CAATAAAA-----TCAACAAACTCTGTACACC--TAACTA-----TGCTAT--------CTTTAC-TT----------CT---TT--AT-TTTTTGG-A--TTTTTTTGCAAATAAATATACTTGAAAACTGTTTA----------------------CCAA------AACCGCATC-TCTGAAATGTTCAATGTTC-AATGTCTTGACCA---------------AGC---SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................GAGAGCTCAGG---GACCCCTGGT...............................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
................A-ATGAGG------GGGAAA------------------------------------------ACCCCG------AGAC----------GCC........................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
...........................................................................................................CGAGAGCTCAGG---GACCCCTGGTAAGGC..........................................................................................................................................................................................................................................................................................................................................................................................2711.0010100
................................................................................CCCG------AGAC----------GCCCGAGAGCTCAGG---GACCCC...................................................................................................................................................................................................................................................................................................................................................................................................2911.0010001
.................................................................................................................................GGTAAGGCTTGAATTCAAC--CA...........................................................................................................................................................................................................................................................................................................................................................................2111.0011000
................................................................................................................................................................................................................................................................................................................................CTA-----TGCTAT--------CTTTAC-TT----------CT---TT--AT-T.............................................................................................................................................2411.0011000
.............................................................................................................AGAGCTCAGG---GACCCCTGGTAAG............................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
........................................................................................................................................................................................................................................................................................................................................................................................TTGG-A--TTTTTTTGCAAAT......................................................................................................................1811.0010001
..........................................................................................................................GACCCCTGGTAAGGCTTG.......................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
..........................................................................................................................................................................AAAAAA-AA--------------AA--------------------------------------AAAGAAAAA-------------A-A-------------------------........................................................................................................................................................................................................................................21200.0510010
dm3
GGGA------------A-ATGAGG------GGGAAA------------------------------------------ACCCCG------AGAC----------GCCCGAGAGCTCAGG---GACCCCTGGTAAGGCTTGAATTCAAC--CACTACCCGA-AAGTAG-GCAAAAAA-AA--------------AA--AAATAAATACAAAA--------------ATAA-------AAAAAA-------------A-A-------------------------CAATAAAA-----TCAAGAAACTCTGTACACC--TAACTA-----TGCTAT--------CTTTAC-TT----------CT---TT--AT-TTTTTGG-A--TTTTTTTGCAAATAAATATACTTGAAAACTGTTTA----------------------CCAA------AACCGCAAC-TATGAAATGTTCAATGTTC-AATGTCTTGACCA---------------AGC---SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................A-AAGTAG-GCAAAAAA-AA--------------A.................................................................................................................................................................................................................................................................................................................................18110.00100000000000000000000000000000000000000000000000000000000000000000000000000000022330000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................GAGAGCTCAGG---GACCCCTGGT...............................................................................................................................................................................................................................................................................................................................................................................................2119.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000008
..................................................................................................................................................................................................................................................................................................A-----TCAAGAAACTCTGTACACC--TAACTA-----...........................................................................................................................................................................................2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................CCGAGAGCTCAGG---GACCCCTGCC...............................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................G---GACCCCTGGTAAGGCTTGAAT....................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TATACTTGAAAACTGTTTA----------------------CCAA------A...............................................................2412.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ATATACTTGAAAACTGTTTA----------------------CCAA------................................................................2412.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................TAC-TT----------CT---TT--AT-TTTTTGG-A--TTTTTT.............................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................C----------GCCCGAGAGCTCAGG---GA.......................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................TGCAAATAAATATACTTGAAAACTGT...................................................................................................2612.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................TTCAAC--CACTACCCGA-AAGTAG-...........................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................TAAGGCTTGAATTCAAC--CACT.........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GAGG------GGGAAA------------------------------------------ACCCCG------AGAC----------...........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................TAAAA-----TCAAGAAACTCTGTACACC--TAAC..................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTGCAAATAAATATACTTGA..........................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ATATACTTGAAAACTGTTTA----------------------CG........................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................CCCCTGGTAAGGCTTGAATTCAAC--CAC..........................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTGCAAATAAATATA...............................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................A--TTTTTTTGCAAATAAATATA...............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................TACCCGA-AAGTAG-GCAAAAAA-AA--------------AA--A.............................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................CCCCTGGTAAGGCTTGAATTCAAC--CACT.........................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................TCAGG---GACCCCTGGTAAGGCT.........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................C----------GCCCGAGAGCTCAGG---GACCCCTGGT...............................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.......................................................................................................................................GCTTGAATTCAAC--CACTACCCGA-AAG...............................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................TAAGGCTTGAATTCAAC--CACTACC......................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................TTTTGCAAATAAATATACTTGAAA........................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................A-ATGAGG------GGGAAA------------------------------------------ACCCCG------AGAC----------G..........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CAAGAAACTCTGTACACC--TAACTA-----T..........................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................AC----------GCCCGAGAGCTCAGG---GACC.....................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TGGTAAGGCTTGAATTCAAC--CACT.........................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GAGG------GGGAAA------------------------------------------ACCCCG------AGAC----------GCCCGAG....................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................CGAGAGCTCAGG---GACCCCTGGT...............................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................................................................GCCCGAGAGCTCAGG---GACCCCTGGTAA.............................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................CGA-AAGTAG-GCAAAAAA-AA--------------AA--AAATA.........................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................GAGAGCTCAGG---GACCCCTGGTA..............................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
........................................................................................................................................CTTGAATTCAAC--CACTACCC.....................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................AA------------------------------------------ACCCCG------AGAC----------GCCCGAGAG..................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................C--TAACTA-----TGCTAT--------CTTTAC-TT----------CT---T....................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................CTGGTAAGGCTTGAATTCAAC--CACT.........................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................C----------GCCCGAGAGCTCAGG---GACCCCTGGTAA.............................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TGGTAAGGCTTGAATTCAAC--C............................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC-TATGAAATGTTCAATGTT....................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAATGTTC-AATGTCTTGACC......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................AAGAAACTCTGTACACC--TAAC..................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................AAATATACTTGAAAACTGTT..................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AGAAACTCTGTACACC--TAACT.................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................CCCCG------AGAC----------GCCCGAGAGCTCAGG---GACC.....................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................AT-TTTTTGG-A--TTTTTTTGCAAATAAATAT................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................AGAGCTCAGG---GACCCCTGGTAAGGCT.........................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................ATTCAAC--CACTACCCGA-AAGT..............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................T--AT-TTTTTGG-A--TTTTTTTGCAAATAAA...................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................TACCCGA-AAGTAG-GCAAAAAA-AA--------------AA--AAA...........................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................CTGTACACC--TAACTA-----TGCTAT--------CTTTAC-TT----------C.........................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TTTTTGG-A--TTTTTTTGCAAA.......................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................CGAGAGCTCAGG---GACCCCTGGTAAGGC..........................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................AGAGCTCAGG---GACCCCTGGTAAGG...........................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................GAAA------------------------------------------ACCCCG------AGAC----------GCCCGAGAGCT................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..............................................................................................................................................................................................................................................................................................TAAAA-----TCAAGAAACTCTGT.............................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................AAATATACTTGAAAACTGTTT.................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................CCCTGGTAAGGCTTGAATTCAAC--CAC..........................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GA------------A-ATGAGG------GGGAAA------------------------------------------ACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................A-AAGTAG-GCAAAAAA-AA--------------AA--..............................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................CCG------AGAC----------GCCCGAGAGCTCAGG---GA.......................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................CCTGGTAAGGCTTGAATTCAAC--CACT.........................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................ACCCCG------AGAC----------GCCCGAGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................CCGA-AAGTAG-GCAAAAAA-AA--------------AA--A.............................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................AGAC----------GCCCGAGAGCTCAGG---.........................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................AATAAATATACTTGAAAACTGT...................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................TAAAA-----TCAAGAAACTCTGTACACC--T.....................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................CAATAAAA-----TCAAGAAACTCTGTACACC--......................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................CAAC--CACTACCCGA-AAGTAG-GC.........................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................A------------------------------------------ACCCCG------AGAC----------GCCCGAGAGCTCAGG---GA.......................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................ATAAAA-----TCAAGAAACTCTGTACACC--T.....................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
...........................................................................................GAC----------GCCCGAGAGCTCAGG---GACCCCTGGT...............................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..............................................................................................................................................................................................................................................................................................................................................................................TT--AT-TTTTTGG-A--TTTTTTTGCAAAT......................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................................................................................................................................................................................................................................................................................................AA-----TCAAGAAACTCTGTACACC--A.....................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TTTTGG-A--TTTTTTTGCAAATAAATAA................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................TATACTTGAAAACTGTTTA----------------------..........................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................AAGGCTTGAATTCAAC--CA...........................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................A--------------ATAA-------AAAAAA-------------A-A-------------------------CAATAAAA-----...........................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droEre2
GGGA------------A-ATGAGG------GGGAAA------------------------------------------ACCCCG------AGAC----------GGCCGAGAGCTCAGG---GACCCCTGGTAAGGCTTGAATTCAAC--CACTACCCGA-AAGTAG-GCAAAAAA-AA--------------AA-----------------------------------ACAAAAAAAAAA-------------C-A-------------------------CAATCAAA-----TCAAGAAACTCTGTACACC--TAACTA-----TGCTAT--------CTTTAC-TT----------CT---TT--A--TTTTTGG-A--TT-TTTCGCAAATAAATATACTTGAAAACTGTTTA----------------------CCAA------AACTGCAAC-TCTGAAATGTTCA--------ATGTCTTGACCA---------------AGCGC-SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................................................................................................................TCAAGAAACTCTGTACACC--T.....................................................................................................................................................................................................20115.001500000015
.....................................................................................................................................................................................................................................................................................................................TACACC--TAACTA-----TGCTAT--------CTTTAC-TT----------C.........................................................................................................................................................2713.0030000003
.........................................................................................................................................................................................................................................AAAAAAAAA-------------C-A-------------------------CAATCAAA-----T..........................................................................................................................................................................................................................2011.0011000000
...................................................................................G------AGAC----------GGCCGAGAGCTCAGG---G........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100
..............................................................................................................................CCTGGTAAGGCTTGAATTCAAC--.............................................................................................................................................................................................................................................................................................................................................................................2211.0010100000
.................................................................................................................CTCAGG---GACCCCTGGTAAGGCTT........................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100
............................................................................................................................................................................................................................................................................................................GAAACTCTGTACACC--TAACTA-----TGC........................................................................................................................................................................................2411.0010000010
............................................................................................................GAGAGCTCAGG---GACCCCTGGT...............................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.......................................................................................................................................GCTTGAATTCAAC--CACTACCC.....................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
droYak3
GGGA------------A-ATGAGG------GGGAAA------------------------------------------ACCCCG------AGAC----------GCCCGAGAGCTCAGG---GACCCCTGGTAAGGCTTGAATTCAAC--CACTACCCGA-AAGTAG-GCAAAAAA-AA--------------A-T------------------AAAATTAAAAAATAAAACAAA----CAA-------------A-A-------------------------CAATAAAA-----TCAAGAAACTCTGTACACC--TAACTA-----TGCTAT--------CTTTAC-TT----------CT---AC--A--TTTTTGG-A--TTTTTTTGCAAATAAATATACTTGAAAACTGTTTA----------------------CCAA-A----AACCGCAAC-TCTGAAATGTTCAATGTTC-AATGTCTTGACCA---------------AGC---SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................................................................................CCCGAGAGCTCAGG---GACCCCTGGTA..............................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................TACTTGAAAACTGTTTA----------------------CCA.......................................................................2011.00101000000000
..........................................................................................................CCGAGAGCTCAGG---GACCCCTGGTAAGGC..........................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTTCAATGTTC-AATGTCTT..........................2211.00101000000000
.................................................................................................................................................................................................................................................A-------------A-A-------------------------CAATAAAA-----TCAAGAAACTCTGT.............................................................................................................................................................................................................2511.00101000000000
.................................................................................................................................................................................................................................................................................................AA-----TCAAGAAACTCTGTACACC--......................................................................................................................................................................................................2111.00110000000000
..........................................................................................................CCGAGAGCTCAGG---GACCCCTGGT...............................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.....................................................................................................................................................................AG-GCAAAAAA-AA--------------A-T------------------AAAATT.......................................................................................................................................................................................................................................................................................................2011.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................ATACTTGAAAACTGTTTA----------------------CCAA-A----AACCGC..........................................................2911.00101000000000
..........................................................................................................................................TGAATTCAAC--CACTACCCGA-AAGT..............................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTTA----------------------CCAA-A----AACCGCAAC-TCTG..................................................2511.00101000000000
.............................................................................................................................................ATTCAAC--CACTACCCGA-AAGT..............................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
...........................................................................................................................................................................................................................................................................................CAATAAAA-----TCAAGAAACTCTGT.............................................................................................................................................................................................................2211.00101000000000
droEug1
GGGA------------A-ACGAGG------GGGAAA------------------------------------------CCCCAG------AGAC----------GCCCGAGAGCTCAGG---GACCCCTGGTAAGGCTTGAATTCAAC--CACTACCCGAAAAATTG-CCAAAAA---------------GATA-T------------------ATAATAAAAAAAAAAAACAAAAAAAAA-----------------------TAATATAT-------------ACAAAA-----TCAAGAAACTCTGTACACC--TAACTA-----TGCTAT--------CTATACTTT----------CT---TA--ATTTTTTTGG-A--TTTTTTTGCAAATAAATATACTTGAAAACTGTTTA----------------------CCAA------AACCGCAAC-TCTGAAATGTTCAATGTTC-AATGTCTTGACCA--------------AAGC---SizeHit CountTotal NormTotal
No Reads
droBia1
GGGA------------A-GCGAGG------GGGAAA------------------------------------------GCCCCG------AGAC----------GCCCGAGAGCTCAGG---GACCCCTGGTAAGGCTTGAATTCAAC--CACTACCCGGCCAATTG-CCAAAAGAA-ATC------------AAT---------------------------------------------------------AAA----------------------------AATCAAA-----TCGAGA-ACTCTGTACACC--TAACTA-----TGCTAT------T-CTATAC-TT----------CT---T---AT-TTTTTGG-A--TT--TTTGCAAATAAATATACTTGAAAACCGTTTA----------------------CCAA------AACCGCAAC-TCTGAAATGTTCAATGTTC-AATGTCTTGACAA--------------AAGC---SizeHit CountTotal NormTotal
No Reads
droTak1
GGGA------------A-ACGAGG------GGGAAA------------------------------------------GCCCCG------AGAC----------GCCCGAGAGCTCAGG---GACCCCTGGTAAGGCTTGAATTCAACTCCACTACCCGACAAATTGACCAAAAAAA-A----------A---AAT-----------------A-------------------------------------------------------------------------TATA-----TGAAGAAACTCTGTACACC--TAACTACTA--TGCTAT--------CTATAC-TT----------CT---TT--A--TTTTTGG-A--TTTTTTTGCAAATAAATATACTTGAAAACTGTTTA----------------------CCAA-A----AACCGCAAC-TCTGAAATGTTCAATGTTC-AATGTCTTGACCA---------------AAA---SizeHit CountTotal NormTotal
No Reads
droEle1
GGGA------------A-ACGAGG------GGGAAA------------------------------------------ACCCCG------AGAC----------GAACGAGAGCTCAGG---GACCCCTGGTAAGGCTTGATTTCAAC--CACTCCCCGA-AAATTG-CCAAAATAA-A----------------TTT-------------------------------------------------------AAAAA-------------------------CA--AAAA-----TCAAGAAACTCTGTACACC--TAACTA-----TGCTAT-----AT-CTATAC-TT----------CT---TT--ATTTTTTTGG-A--TTTGTTTGCAAATAAATATACTTGAAAACTGTTTA----------------------CCAA------AACCGCAAC-TCTGAAATGTTCAATGTTCCTATGTCTTGACCA---------------AGC---SizeHit CountTotal NormTotal
No Reads
droRho1
TGGA------------A-ACGAGG------GGGAAA------------------------------------------ACCCCG------AGAC----------GCCCGAGAGCTCAGG---GACCCCTGGTAAGGCTTGAATTCAAC--CACTACCCGA-AAATTG-CCAAAAGAA-A----------------T---------------------------------------------------------AAA-A-------------------------AA--AAAA-----TCAAGAAACTCTGTACACC--TAACTA-----T-CTAT--------CTATAC-TT----------CT---TT--AT-TTTTTGG-A--TTTTTTTGCAAATAAATATACTTGAA-ACTGTTTA----------------------CCAAAA----AACCGCAAC-TCTGAAATGTTCAATGTTC-AATGTCTTGACCA---------------AGC---SizeHit CountTotal NormTotal
No Reads
droFic1
GGGA------------A-GCGAGG------GGGAAA------------------------------------------ACCCCG------AGAC----------GCCCGAGAGCTCAGG---GACCCCTGGTAAGGCTTGAATTCAAC--CACTACCCGA-A-CTTG-CCAAAAGAA-A--------------AAT---------------------------------------------------------AAA-A-------------------------CA--AAAA---T-TTAAGAAACTCTGTACACC--TAACTA-----TTCTAT--------CTATAC-TT----------CT---T--------TTTTG-A--TT--TTTGCAAATAAATATACTTGAAAACTGTTTA----------------------CCAA------AACCGCAAC-TCTGAAATGTTCAATGTTC-AATGTCTTGACCA---------------AGC---SizeHit CountTotal NormTotal
No Reads
droKik1
GGGC------------C-AAGAGG------GGGAAGAAGAAGCCCCA------------------------------ATCGCCG------AGTTGGC-------AGACGGGAGCTCTGGGATGACCCCTGGTAAGGCTTGAAAACAAC--AACT---CGA----TCG-GCAAA---------------------------------------------------------------------------------------------------------------GATAAAA-----TCAAGAAACTCTGTACACTTTTAACTA-----TGCTAT--------AT-TAC-TT----------CT---TT--TT-ATTTTGG-A--ACTGTTTGCAAATAAAAATAAAAAATAAACCTTTA----------------------A-AA------AACC---AA-ACTGAAATGTTCAAACACG-AAA---------------------------CT-GSizeHit CountTotal NormTotal
No Reads
droAna3
GGGA------------A-ACGAGGGCTCCGGGGAAG------------------------------------------TGCCCGTGGGTGAG-------AGCACCCCCGAGAA---------GTCCCCTGGTAAGGCTTGAA-----C--CACCAC----------------A------TCA-AGTTAAAA-------------------------------------------------------GTCTA----------------------------------TTTAGA-----ACATGAAACTCTGTACACC--TAACTA-----TGCTAT--CGATTACTTTAC-TT----------CT---TTTTAT-TTTTTGG-AA-CTATTTTGCAAATAAATATA-------------------------------------TCGA------AACCGCAAT-CCTGAAATGTTCA--------ATGTCTTGACCA---------------AGCACCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................CACCCCCGAGAA---------GTCCCCTGG................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
....................................................................................................................................................................................................................................................................................................................GTACACC--TAACTA-----TGCTAT--CG.................................................................................................................................................................................2111.001010000
.GGA------------A-ACGAGGGCTCCGGGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
..GA------------A-ACGAGGGCTCCGGGGAAG------------------------------------------T....................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.....................................................................................................CACCCCCGAGAA---------GTCCCCTGGTAAG............................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
.........................................................................................GAG-------AGCACCCCCGAGAA---------GTCC.....................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.........................................................................................................................................................................................................................................................................................................CATGAAACTCTGTACACC--T.....................................................................................................................................................................................................1911.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT-CCTGAAATGTTCA--------ATGTCTTGACC......................2711.001010000
............................................................................................................................................................................................................................................................................................................................................AT--CGATTACTTTAC-TT----------CT---TTTTAT-T.............................................................................................................................................2511.001100000
....................................................................................................................................................................................................................................................................................................................GTACACC--TAACTA-----TGCTAT--C..................................................................................................................................................................................2011.001010000
...............................................................................GCCCGTGGGTGAG-------AGCACC..........................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.......................................................................................GTGAG-------AGCACCCCCGAGAA---------GTCC.....................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
....................GAGGGCTCCGGGGAAG------------------------------------------TGCCCGTGGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
......................GGGCTCCGGGGAAG------------------------------------------TA...................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.001000100
...............................................................................................................................................................................................................................................................................................................ACTCTGTACACC--TAACTA-----TGCTAT--CGATT..............................................................................................................................................................................2911.001010000
droBip1
GGGA------------A-ACGAGG------GGGAAG------------------------------------------TCCCTGTGGGCGAC-CACCAGACCAACCCCGAGAAAT---------CCCCCGGTAAGGCTTGAATT----------------------G-CCACATGAA-A------TTAC-A-------------------------------------------------------GTCTA----------------------------------TTTAAA-----ACATGAAACTCTGTACACT--TAACTACTATATGCTATATCGATTACTATAC-TT----------CT---TTTTAT-TTTTTGG-AA-CTATTTTGCAAATAAATAAA-------------------------------------TCAA------AACCGCAAT-TCTGAAATATTCA--------ATGTCTTGACCA---------------AGC---SizeHit CountTotal NormTotal
No Reads
dp5
GGGACCCGAAACCCTCA-GCGAGG------GGGAAC---------------------------------------------CCG------TGC-------------CCCGTCCCTCAGA---GAGCGTTGGTAAGGCATCT--------------CCCGA-A-----------------TAAACGTTAAAGATA-TTGAACAACCCCCAAAGC--------------AA-------CC----------------------------------------AGC-------AACCAATC-------TTTTTGTAAA----TGCCTA-----TGCTCA-----TT-ATTTTC-TT----------TTTGT-T--T--TCTTTCGAAACTGTTTTTGCAAATAAATATAATA----------------------------------CCGAAAAAACAAATGCAATGTTTGAAATGT-------TC-AATGTCTTGACCCCCAAC---------GTGC---SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................AACCCCCAAAGC--------------AA-------CC----------------------------------------AGC-------...................................................................................................................................................................................................................................1912.0020110000000
............................................................................................................................................................................................AAGATA-TTGAACAACCCCCAAAGC--------------................................................................................................................................................................................................................................................................................................2411.0010100000000
............................................................................................C-------------CCCGTCCCTCAGA---GAGC.....................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001000000
..............................................................................................................................GTTGGTAAGGCATCT--------------CCCGA-..................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...............................................................................................................CCCTCAGA---GAGCGTTGGTAAGGC..........................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100000
........................................................................................................................................................................................................................................................................................C-------AACCAATC-------TTTTTGTAAA----TG....................................................................................................................................................................................................2111.0010100000000
...................................................................................................................CAGA---GAGCGTTGGTAAGGCATCT--------------CC......................................................................................................................................................................................................................................................................................................................................................................2511.0010000010000
..........................................................................................................................................................................................TAAAGATA-TTGAACAACCCCC...................................................................................................................................................................................................................................................................................................................2111.0010100000000
....................GAGG------GGGAAC---------------------------------------------CCG------TGC-------------CCCGTCC..................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
...................................................................................G------TGC-------------CCCGTCCCTCAGA---G........................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................ATATAATA----------------------------------CCGAAAAAACA...............................................................1911.0010100000000
...............CA-GCGAGG------GGGAAC---------------------------------------------CCG------TGC-------------CCC......................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100000
droPer2
GGGACCCGAAACCCTCA-GCGAGG------GGGAAC---------------------------------------------CCG------TGC-------------CCCGTCCCTCAGA---GAGCGTTGGTAAGGCATCT--------------CCCGA-A-----------------TAAACGTTAAAGATA-TTGAACAACCCCCAAAGC--------------AA-------CC----------------------------------------AGC-------AACCAATC-------TTTTTGTAAA----TGCCTA-----TGCTCA-----TT-ATTTTC-TT----------TTTGT-T--T--TCTTTCGAAACTGTTTTTGCAAATAAATATAATA----------------------------------CCGAAAAAACAAATGCAATGTTTGAAATGT-------TC-AATGTCTTGACCCCCAACGTGCACCATACAC---SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................GTCCCTCAGA---GAGCGTTGGTAAGGC..........................................................................................................................................................................................................................................................................................................................................................................................2512.002200000
....................................................................................................................AGA---GAGCGTTGGTAAGGCATCT--------------C.......................................................................................................................................................................................................................................................................................................................................................................2312.002100010
...................................................................................................................................................................................TAAACGTTAAAGATA-TTGA............................................................................................................................................................................................................................................................................................................................1911.001001000
...................................................................................................................CAGA---GAGCGTTGGTAAGGCATCT--------------........................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..........................................................................................................................GAGCGTTGGTAAGGCATCT--------------CCCGA-..................................................................................................................................................................................................................................................................................................................................................................2411.001000001
droWil2
CGGTCCG-------TCCGTTAAGG------AGGTCC------CAGATCCGGTTCCGGTT---------CCGGTAACGAATGCAA------CAGC----------GGTGACAAGTTCAGA---GACCGTTGGTAAGGCATGAATCC------------CGA-A-ATAA-ACCACACC-AA--------------CAATACACACACACA----------------------------CACACA-------------C-A-------------------------CACATACA-----TATATACACTTTGTAACTA--TACCAATTA--CTCTAT--------T--TAG-TATTTAAAAACTAT---TT--CTGTTTTTGG-A--GT-ACTTGCAAATAAAAACTTTTT---ACTGATTACAAAAACAAAACAAAAAATAAAT-AA--AACCAAATGCAAT-CTTGAAATATTCA--------ATATTTTGCTCA---------------AGC---SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................AACGAATGCAA------CAGC----------GGTGA......................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200200
...........................................................................................................GACAAGTTCAGA---GACCGTT..................................................................................................................................................................................................................................................................................................................................................................................................1912.00200200
........................................................................................................GGTGACAAGTTCAGA---GACCGTTGG................................................................................................................................................................................................................................................................................................................................................................................................2412.00201100
........................................................................................................................................................................................................................................................................................................................................CTCTAT--------T--TAG-TATTTAAA..............................................................................................................................................................1811.00100010
...............................................................................TGCAA------CAGC----------GGTGACAAG..................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001
....................................................................................................................AGA---GACCGTTGGTAAGGCATGAATCC------------C.....................................................................................................................................................................................................................................................................................................................................................................2711.00100100
.........................................................................................................................................................................................................................................................................................................................................................................AT---TT--CTGTTTTTGG-A--GT-ACTTGC..........................................................................................................................2311.00100010
.................................................................................................................TTCAGA---GACCGTTGGTAAGGC..........................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
...........................................................................CGAATGCAA------CAGC----------GGTGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
..............................AGGTCC------CAGATCCGGTTCCGGTT---------CCG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
................................................................................................................................................................................................................................................CA-------------C-A-------------------------CACATACA-----TATATACACTTTGT.............................................................................................................................................................................................................2611.00100010
.......................................................................GTAACGAATGCAA------CAGC----------GGTGACA....................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000
..............................................................................................................................GTTGGTAAGGCATGAATCC------------C.....................................................................................................................................................................................................................................................................................................................................................................2011.00110000
..........................................................................................................................................................................................................................................................................................................................A--TACCAATTA--CTCTAT--------T--TAG-T.....................................................................................................................................................................2111.00100010
...................................................................................................................CAGA---GACCGTTGGTAAGGCATG.......................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
...................................................................................................................CAGA---GACCGTTGGTAAGGC..........................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
................................................................................................................GTTCAGA---GACCGTTGGTAAGGCAT........................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
.........................................................................AACGAATGCAA------CAGC----------GGTGACAAGTT................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
.....................................................CCGGTT---------CCGGTAACGAATGCAA------CAGC----------...........................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
.............................................................................................................................CGTTGGTAAGGCATGAATCC------------C.....................................................................................................................................................................................................................................................................................................................................................................2111.00100100
..............................................................................................................................................................................................................................................................................................................................................................ATTTAAAAACTAT---TT--CTGTTTTT.........................................................................................................................................2311.00101000
........................................................................................................GGTGACAAGTTCAGA---GACCGTTGGT...............................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
..................................................................................................................................................................................................................................................................................................A-----TATATACACTTTGTAACTA--TACCA.................................................................................................................................................................................................2511.00101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAACAAAAAATAAAT-AA--A...................................................................2060.17101000
droVir3
GGGTCCG-------GCCGCCGATG------CGGATG------CGGCTCAAAACGCGGCTCAAACCGAAGCGGCCAGCATTGCCA------AGGC----------GGTGACAAGTACTGA---AACCGTTGGTAAGGCCCAAAAGGCA---------------------ACAACAGC-AA--------------CA-----------------------------------ACAACATAAAATCTAAATCAAATAAA-ACACAAACCACAAATCGAGCAAGCAACTATTACT-----TCAACT--TCTTCTACTTG--CAACCA-----AACAC-------C-GTT-TTTTG----------TTTGT-T--T----TTT---T--TTTTTTTTTTAATTTATATAGAGAAAATTTATTTT----------------------TTGA------AA----------------------------------------------------------C---SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................................CAACTATTACT-----TCAACT--TCTT...............................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................CAGCATTGCCA------AGGC----------GGTGA......................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
........................................................................................................GGTGACAAGTACTGA---AACCGTTG.................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................CAAAAGGCA---------------------ACAACAGC-AA--------------CA-----------------------------------ACAACATA.....................................................................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................GC-AA--------------CA-----------------------------------ACAACATAAAATCTAAAT...........................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................A-ACACAAACCACAAATCGAGCAAGC..........................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TTCTACTTG--CAACCA-----AACAC-------C-GTT-.........................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................ACAC-------C-GTT-TTTTG----------TTTGT-T--T----T...........................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................ATCGAGCAAGCAACTATTACT-----...........................................................................................................................................................................................................................2111.001000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................CAAACCACAAATCGAGCAAGCAACTA.....................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
...............................................CAAAACGCGGCTCAAACCGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................GTTGGTAAGGCCCAAAAG...................................................................................................................................................................................................................................................................................................................................................................................1811.001000000010000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................AACT--TCTTCTACTTG--CAACCA-----AACAC-------C-GT...........................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................A---AACCGTTGGTAAGGCCCAAAAG...................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
.........................................................CTCAAACCGAAGCGGCCAGCATTGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................TG--CAACCA-----AACAC-------C-GTT-TTTTG----------..........................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................GCAACTATTACT-----TCAACT--TCTTCTACT..........................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................CGAGCAAGCAACTATTACT-----TCAACT--...................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CAACT--TCTTCTACTTG--CAACCA-----...........................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................GA---AACCGTTGGTAAGGCCCAA......................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000001000000000000000000000000000
...............................................CAAAACGCGGCTCAAACCGAAGCGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................CGTTGGTAAGGCCCAAAAGG..................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................................................................AACTATTACT-----TCAACT--TCTTCTACTTG--......................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................TGCCA------AGGC----------GGTGACAAG..................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................CAACT--TCTTCTACTTG--CAACC.................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................A---------------------ACAACAGC-AA--------------CA-----------------------------------ACAACATA.....................................................................................................................................................................................................................................................................................2150.201000000000000000000000100000000000000000000000000000000000000000
droGri2
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-TT----------TT---TT--TT-TTTTTGG-A--AC--TTTGCAAATAAAAACTGTTATACAAAATACA--------------------AACAAA------AAATGCGAA-TGTGATATGTTCTATGT----ATGGCCTACACA---------------CAC---SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 03:08 PM