ID:

dsi_5250

 Coordinate:

3r:17015260-17015409 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.6 -7.9

Flybase annnotation

CDS [3r_17015410_17015532_-]; exon [3r_17015410_17015638_-]; intron [3r_17014198_17015409_-]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TGGTGGGGCTGCAGTTCTCCGGGAAGACGACGTTCGTCAATGTTATTGCAGTGAGTATTTTCGCAGTGGGTGTGTGCGAAATCGTGTGGGTGTATGGGTGAGAGGGTGGTTTTTTTTTTGTGTGTAGTCGTCTGTTGTGGGGTGGGGAGGGGGTTCAGGGAAAGCCGGGGGATCAGCTACTACTTAAAGAGCATTACAAACCCCCAGTCACAAAGGAATTGGCATTAGCTCGAGTCCCCCACTCTAACAT
******************************************************...(((((((.(((.((.((((((....)))))).)).)))..))))))).........***************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 SRR902009
testis
 SRR618934
dsim w501 ovaries
 M023
head
 M024
male body		 O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
 M053
female body
....GGGGCTGCAGTTCTCCGGGAA................................................................................................................................................................................................................................. 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................AGCATTACAAACCCCC............................................. 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...............TCTCCGGGAAGACGACGTTCGTCAATGTT.............................................................................................................................................................................................................. 29 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
............................GACGTTCGTCAATGTTATTGC......................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................GTGGGTGTATGGGTGAGAGGGTGGTTTT......................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GCTCGAGTCCCCCACTCT..... 18 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
......................................................GTATTTTCGCAGTGGGTG.................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...................................................................................................................................................................................................................AAAGGAATTGGCATTAGCTC................... 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................AAAGCCTAGGGATCAGCTACAA.................................................................... 22 3 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0
.............................................................................................ACGGATGAGACGGTGGTTTT......................................................................................................................................... 20 3 9 0.22 2 0 2 0 0 0 0 0 0 0 0 0
.................................................................................................................................GACTGTTGTGGGGTGGGGGGA.................................................................................................... 21 3 6 0.17 1 0 0 0 0 0 0 0 0 1 0 0
.......................AAGATTACGTTTGTCAATGTT.............................................................................................................................................................................................................. 21 3 9 0.11 1 0 0 0 0 0 0 0 0 0 1 0
..........................................................................................................................................GGGGGGGGGAGCGGGTTC.............................................................................................. 18 2 11 0.09 1 0 0 1 0 0 0 0 0 0 0 0
...............................................................................................GGGTGAGAGCGTGCCTTTT........................................................................................................................................ 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1

Anti-sense strand reads

ACCACCCCGACGTCAAGAGGCCCTTCTGCTGCAAGCAGTTACAATAACGTCACTCATAAAAGCGTCACCCACACACGCTTTAGCACACCCACATACCCACTCTCCCACCAAAAAAAAAACACACATCAGCAGACAACACCCCACCCCTCCCCCAAGTCCCTTTCGGCCCCCTAGTCGATGATGAATTTCTCGTAATGTTTGGGGGTCAGTGTTTCCTTAACCGTAATCGAGCTCAGGGGGTGAGATTGTA
*****************************************************************************************************************************************...(((((((.(((.((.((((((....)))))).)).)))..))))))).........****************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M023
head
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 O002
Head
 SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
..............................................................................................ACCCGCGGTCCCACCAAAAA........................................................................................................................................ 20 3 8 4.63 37 37 0 0 0 0 0 0 0
.....CCCGACGTCAAGAGGCCCTTC................................................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0
............................................................................................ATACCCGCGGTCCCACCAAAAA........................................................................................................................................ 22 3 1 1.00 1 1 0 0 0 0 0 0 0
....CCCCGACGTCAAGAGGCCCTTC................................................................................................................................................................................................................................ 22 0 1 1.00 1 0 1 0 0 0 0 0 0
.....CCCGACGTCAAGAGGCCC................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0
............TCAAGAGGCCCTTCTGCTGC.......................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0
..................................................................................................................................................................TTGGCCCCCTAGTCGATGATGA.................................................................. 22 1 1 1.00 1 0 0 1 0 0 0 0 0
..................................................................................................................................................................................................GTGTTTGGGGGTCGGTGTTTCAT................................. 23 3 3 0.33 1 0 0 0 1 0 0 0 0
.....................................................................................................CTCCCACCAAAAAAAAAAA.................................................................................................................................. 19 1 6 0.17 1 0 0 0 0 0 1 0 0
.......................TGCTGCTGCAAGCAGTTG................................................................................................................................................................................................................. 18 2 6 0.17 1 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................TGAATTTCACGAAATGTTAGG................................................ 21 3 6 0.17 1 0 0 0 1 0 0 0 0
.................AGGCCCTTCTTCTGC.......................................................................................................................................................................................................................... 15 1 7 0.14 1 0 0 0 0 0 0 1 0
........................................................................................................................................................................................................................................TCAGGCGATGAGATTG.. 16 2 18 0.11 2 0 0 0 0 2 0 0 0
..................................................................................................................................................................TCGGACCCCTACTGGATGA..................................................................... 19 3 12 0.08 1 0 0 0 0 1 0 0 0
...ACCCCGAATTCAAGAGGCG.................................................................................................................................................................................................................................... 19 3 18 0.06 1 0 0 0 1 0 0 0 0
..................................................................................................................................................................TCGGCCCGCTACTGGATGA..................................................................... 19 3 18 0.06 1 0 0 0 0 1 0 0 0
........................................................................................................................................................................................................................................TCAGGCCGTGAGATTG.. 16 2 19 0.05 1 0 0 0 1 0 0 0 0
......................................................................................................................................................................................GTATTTCTCGAAATGTT................................................... 17 2 20 0.05 1 0 0 0 0 1 0 0 0
.....................................................................................................................................................................................TGAATTTCACGAAATGTT................................................... 18 2 20 0.05 1 0 0 0 0 0 0 0 1
........................................................................................................................................................................CCCTAGTCGACGATGGAT................................................................ 18 2 20 0.05 1 1 0 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:17015210-17015459 - dsi_5250 TGGTGGGGCTGCAGTTCTCCGGGAAGACGACGTTCGTCAATGTTATTGCAGTGAGTATTTT-CGCA-GTGGG-------------------------TGTGTGCGAAA---TCGTGT---GGGTGTATGGGTGAGA---GGGTGGTTT---TTTTTTTGTGTGTAGTCGTCTGTT------GTG--------------------GGGTGG-GGAGGG-G---------GTTCA---GGGAAAGCCGGG-GGATCAG------CTACTACT----------------TAAAGAGCA------T--------TACAAACCC-----------------------------------CCAGTC------------------------------------------------------------ACAAAGGA---ATTGGCA-----------------TTAGCTCG-AG--------------T---CCCCCACTC-TAAC----AT
droSec2 scaffold_0:17875884-17876133 - TGGTGGGGCTGCAGTTCTCCGGGAAGACGACGTTCGTCAATGTTATTGCAGTGAGTATTTT-CGCA-GTGGG-------------------------TGTGTGCGAAT---TCGTGT---GGGTGTATGGGTGAGA---GGGTGGTTT---TTTTTTTGTGTGCGGTCGTCTGTT------GAG--------------------GAGCGG-GGAGGG-G---------GTTCG---GGGAAAGCCGGG-AGATCAG------CTACTACT----------------TAAAGAGCA------T--------TACAAACCC-----------------------------------CCAGTG------------------------------------------------------------ACAAAGGA---ATTGGCA-----------------TTAGCTCA-AG--------------T---CCGCCACTC-TAAC----AT
dm3 chr3R:3952515-3952763 + TAGTGGGGCTGCAGTTCTCCGGGAAGACGACGTTCGTCAATGTTATTGCAGTGAGTATTTT-CGCA-GTGGG-------------------------TGTGTGCGAAT---TCGTGT---GGGTGTATGGGTGAGA---GGGTGGTTT---TTTTTG--TGTGTGGTTGTCTGTT------GTGT-------------------GGGTGG-GGAGGG-G---------GTTCA---CGGAAAGCCGGG-GGATCAG------CTACTACT----------------TAAAAAGCA------T--------TACAAACCC-----------------------------------CCAGTG------------------------------------------------------------ACAAAGGA---ATTGGTC-----------------TTAGCTTG-AT--------------T---CCCCCACTC-TAAC----AT
droEre2 scaffold_4770:17629003-17629241 - TGGTGGGGCTGCAGTTCTCCGGGAAGACGACGTTCGTCAATGTTATTGCAGTGAGTATTTT-CGCA-GTGGG-------------------------TGTGTGCGAAT---TCGTGT---GCGTGTATGGGTGAGA---GGGTGGTTT---TTGTGT---GTGT----GTGTGTG------GTGT---------------------GCGG-GGTAGG-G---------GTGCA---GGGAAAGCCGGG-GGATCAG------CTACCACT----------------TAAAGAGCA------T--------TACAAACCC-----------------------------------CCCGTG------------------------------------------------------------ACAAAGGA---TTGACA--T-----------------AGCGCG-G---------------T---TCCCCAATG-TAAC----AT
droYak3 3R:8022929-8023178 + TGGTGGGACTGCAGTTCTCCGGGAAGACGACGTTCGTCAATGTTATTGCAGTGAGTATTTT-CGCA-GTGGG-------------------------TGTGTGCGAAT---TCGTGT---GGGTGTATGGGTGAGA---GGGTGGTTT---TTTTTTTGTGTGT----GACTGTT------GTGTGGGGAG---------------AGGG-GGAGCG-G---------GTGCA---GGGAAAGCCGGG-GGATCAG------CTACTACT----------------TAAAGAGCA------T--------TACAAACCC-----------------------------------CCAGTG------------------------------------------------------------ACAAAGGA---AATGGCA-A-----------------ACCGCG-GT--------------T---CCCCCACTC-TAAC----TT
droEug1 scf7180000409490:789960-790206 - TCGTGGGGCTGCAATTCTCAGGGAAGACGACGTTCGTCAATGTTATTGCAGTGAGTATTT--TGCA-GTGGG-------------------------TGTGTGCGAAT---TTGTAC---GGGTGTATGGGTGAGAGGAGGGTAGTTT---TTTTTT---------------GTT------GTGC----AG---------------AGGG-GGAGAG-G---------GTGCA---GAGAAAGCCGGG-GGATCAA------CTATGACTAAA------TGTCGGTTAA----------------------ACCAACGT--------C--------------------------CTAGTC------------------------------------------------------------ACAAAGGA---ATTGATT-A-----------------AGTCCA-TT--------------GACTTTCCCACTT-TCACCCCTTT
droBia1 scf7180000302402:6625555-6625807 + TGGTGGGGCTGCAGTTCTCCGGGAAGACGACGTTCGTCAATGTTATTGCAGTGAGTATTT--CGCA-CTGGGCGT---------------GTGTGAGAGTGTGCGAAT---T-TTGC---CAGAGTGTGGGTGGAG---GGGTGGTTT---TTTTTG---------------GT-------------TCGGAGGAGGGTCGTTGCAG-------GGG-G---------GTGCA---GAGAAAGCCGGG-GGATCGA------CCATGTCTATA------GGTCGGCTGAAGAACC------C--------CACCAACGC-----------------------------------CTAATC------------------------------------------------------------ACAAAGGA---ATTGCC--T-----------------GGC--------------------T---CCCCCACTT-TCCC----TT
droTak1 scf7180000415711:1666885-1667124 + TGGTGGGGCTGCAGTTCTCCGGGAAGACGACGTTCGTCAATGTTATTGCAGTGAGTATTT--CGCA-CTGC---------------TT--GTGTGTGTGTGTGCGAAT---T--TGC---CAGTGTATGGGTGGGA--AGGGTGGTTT---TTTTTT---G---------------------------------------------G-------GGG-G---------GCGCA---GAGAAAGCCGGG-GGATCGG------CCATGACTATATC-----GTCGGTTAAAGAACC----AAA--------CACAAACCC-----------------------------------CTAATC------------------------------------------------------------ACAAAGGA---ACTGCTA-G-----------------AGCTCA-GT--------------G---CCCCCACTT-TCCC----TT
droEle1 scf7180000491212:1907746-1908008 - TGGTGGGGCTGCAATTCTCCGGGAAGACGACGTTCGTCAATGTTATTGCAGTGAGTATTT--CGCAGGGCGGTGTGTGC-GTTTGTGT--GTGTGTGTGTGTGCGAAT---TG--GC---AAGTGTATGGGTGAGA---GGGTGGTTT---TTTTTTTGTG----------------------------------------------AGGGGAAGGGGGCTGT---TGGTGGA---GAGAAAGCCGGG-GGATCAG------CTATGACTAAA------TGTCGGTTAAAGTATA------A--------TACAAACCC--------C--------------------------CAAATC------------------------------------------------------------ACAAAGGA---ATTACA--T-----------------ACCT-------------------T---CCCCAACTT-TCCC----TT
droRho1 scf7180000768365:8909-9143 - TGGTGGGGCTGCAATTCTCCGGGAAGACGACGTTCGTCAATGTTATTGCAGTGAGTATTT--CGCA-GTGGGTGT---------------------ATGTGTGCGAAT---T--TGC---CAGTGTATGGGTGAGA---GGGTGGTTT---TTTTTTT-TG------------------G------GT---------------------G-GGCGGG-G----GTTTGGTGTG---GAGAAAGCCGGG-GGATCAG------CTATGACTAAA------TGTCAGTTAAAGAACA------A--------AACAAACCC-----------------------------------CCAGTC------------------------------------------------------------ACAAAGGA---ATTACC-------------------------------------------T---TCCCCAATT-TCCC----TT
droFic1 scf7180000454106:631465-631690 - TCGTGGGACTGCAGTTCTCCGGGAAGACGACGTTCGTCAATGTTATTGCAGTGAGTATTTTGCACA-GTGGG-------------------------TGTGTGCGGGT---TTCTGT---GAGTGTGTGGGTGAGA---GGGTGGTTT---TTTC---------------------------------------------------G-------GGG-G---------GTGGA---GAGAATGCCGGG-GGATCAA------CTATGACTAAA------AGTCGGTCGAAGAATA------A--------TGCAAACC------------------------------------CGAAAC------------------------------------------------------------ACAAAGGA---ATTGCC--T-----------------CCCTTT-T---------------G---ACCCCACTT-TCCC----TT
droKik1 scf7180000302313:608059-608352 - TGGTGGGGCTGCAGTTCTCGGGCAAAACGACGTTCGTCAATGTTATTGCAGTGAGTACTT--CTTC-GTGGGTGTGTGT---------GTGTGTGTGTGCGTGCGAAT---T-TTGCTACAAGTGTATGGGTGAGA---GGGTGGTTT---TGCTAG--------------GGGCAGGGCGGC----GAGGCGAAG------------------GCG-G---------GGTGA---GAGAAAGCCGGG-GGA----------ATATGACTAAA------AGTCAGT-AAAAAGTA------A--------TACTAAACC--------T--------------------------TAGCTG------------------------------------------------------------ACAAAGGCGGTATGG--TATGGCCAT-----TGTTTTGGTAGGGAGCTCCCTAGGAAACAC-C-TTGCTGTTTCGGAC----TT
droAna3 scaffold_13340:21407746-21407988 + TGGTGGGACTGCAATTCTCCGGGAAAACTACGTTTGTCAATGTTATTGCAGTGAGTATTTT-CAT--T-----T---------TGTTTGTTTGTGTGTGTGTGCGAAT---TTTCGC---TAGTGTGCAGGGGCGA---G-GTGC------------------------------------------------------TGTAACAGGGG--------GGTGG---TCGCCCA---GTGAAAGCCGGGGGGACCGG------GAATGACTACTGTA---TGTTAGT-AACTAATA------A----ATGTCAGGAAACT--------G--------------------------CAAAAC------------------------------------------------------------ACAAAGGA---ATTCGA--T-----------------AGC-------------------------CAACGATT-ATTT----TA
droBip1 scf7180000396413:1130363-1130634 - TGGTGGGACTGCAATTCTCTGGGAAAACGACGTTCGTTAATGTTATTGCAGTGAGTATTTT-CAT--T-----T---------TGTTTGGTTGTGTGTGTGTGCGAATTTTT-TTGC---TTGTGTGCAGGGGGCG--AG-GTGC------------------------------------------------------TGTAACAGGGG--------GGTGG---TCGCGCA---GTGAAAGCCGGGGGGATCGGGTATAACTACTACTAAA------TGTTAGT-AACTAATA------A----AGGGCAGGAACCC--------G--------------------------CAAAAC------------------------------------------------------------ACAAAGGG---ATTGGA--TGGCCAAAGATGTAT-TTCGGTTT-AG--------------T---CCACGGGTG-CGCC----TT
dp5 2:13120022-13120362 - TAGTGGGGCTGCAGTTCTCGGGGAAGACAACGTTCGTCAATGTTATTGCAGTGAGTATTTG-CAT--ATGGGTGTGTGTGTTC--------AGTGACAGTGTGCTGTT---T-TTGC---CAATGTGTGCGA--GG---GGGTTGCTTGATTGCT---G-----------CCGTTATGGC------GTAGGAGGAGGCC---------------------CGG---AGGGGCA---GAGAAAGCCGGG-G-----A------CTATGACTATTCTATC---------A---AATAATACAAACGAA-----ATTAACCC-------CG--------------------------CGACTGTCAAAAGAATCGCAAAGAGAGAGAGA--GAGAGAGAGAGGGAGAGCACAGACCCTCGCTCCCTGACG-AGTGAGC--AATCACCAT-----GAACTTGGCCCG-AGG-------------T-C-TCGCTATTT-GGTT----AT
droPer2 scaffold_0:7333616-7333957 + TGGTGGGGCTGCAGTTCTCGGGGAAGACAACGTTCGTCAATGTTATTGCAGTGAGTATTTG-CAT--ATGGGTGTGTGT-TTC--------AGTGACGGTGTGCTGTT---T-TTGC---CAATGTGTGCGA--GG---GGGTTGCTTGATTGCT---G-----------CCGTTATGGC------GTAGGAGGAGGCC---------------------CGG---AGGGGCA---GAGAAAGCCGGG-G-----A------CTATGACTATTCCATC---------A---AATAATACAAACGAA-----ATTAACCC-------CG--------------------------CGACTGTCAAAAGAATCGCAAAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGCACAGACCCTCGCTCCCTGACG-AGTGAGC--AATCACCAT-----GAACTTGGCCCG-AGG-------------T-C-TCGCTATTT-GGTT----AT
droWil2 scf2_1100000004943:14040445-14040520 + TTGTCGGACTACAATTCTCGGGCAAGACAACTTTCGTCAATGTTATTGCAGTGAGTATATTTCGCATGTGGG-------------------------CGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_13047:9968279-9968564 + dvi_16265 TGGTCGGCTTGCAATTCTCAGGCAAAACCACCTTCGTCAATGTTATTGCAGTGAGTATGCT-TTT--T-----T---------TTTTTTTT---------TAGCAAA---------T---AAGTGTGTGTGTGAGG---CGGCGGCTG---TTCTTT---G------------------C------GG------------------GCGC-G---GA-G----GTAA---GCAGAGCAGTGTGCCGCA-A-----G------CTATGCCAATGCAATAG--CCAGAGGAAGAA--------A--CC----AATAAAC-TAAATGC--CTTGGACAGAAGGAGAAGCGCGGGGCGCCAGAC-------------------------ACAAATTGTGACAAATCGAGC-------------------GTTGTTGTTG--TTTGGCCG------------TT------T--------------T---CTATTGATT-TGCC----TT
droMoj3 scaffold_6540:9395547-9395607 - TTGTCGGCCTCCAATTCTCAGGCAAAACCACATTCGTCAATGTTATTGCAGTGAGTATTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2 scaffold_14906:7482792-7483009 - TAGTCGGACTGCAGTTCTCAGGCAAGACGACGTTCGTCAATGTTATTGCAGTGAGTATTTATTGCA-AACAA-------------------------T------GAAA---TGGTGT---GGAA--ATGGG--------CGGTGA-------------------------CTGTT------CCGA---------------------GCGG------------------GGGAA---GAGTTTGCCGCA-G-----T------CTATGACAATGCAATCG--GGAGAGAAAAAA--------A--GA-----AGAAACCTAAACTAAAG--------------------------CAAATG------------------------------------------------------------ACAAATGA---ATCGCC--G-----------------TTT--------------------T---TTTTCCATT-TGCC----AT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TGGTGGGGCTGCAGTTCTCCGGGAAGACGACGTTCGTCAATGTTATTGCAGTGAGTATTTT-CGCA-GTGGG-------------------------TGTGTGCGAAA---TCGTGT---GGGTGTATGGGTGAGA---GGGTGGTTT---TTTTTTTGTGTGTAGTCGTCTGTT------GTG--------------------GGGTGG-GGAGGG-G---------GTTCA---GGGAAAGCCGGG-GGATCAG------CTACTACT----------------TAAAGAGCA------T--------TACAAACCC-----------------------------------CCAGTC------------------------------------------------------------ACAAAGGA---ATTGGCA-----------------TTAGCTCG-AG--------------T---CCCCCACTC-TAAC----ATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....GGGGCTGCAGTTCTCCGGGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200200000000000000
...................................................................................................................................................................................................................................................................................................AGCA------T--------TACAAACCC-----------------------------------CC....................................................................................................................................................1611.00100000000001000000
...............TCTCCGGGAAGACGACGTTCGTCAATGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000001000000000
............................GACGTTCGTCAATGTTATTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
...................................................................................................................GT---GGGTGTATGGGTGAGA---GGGTGGTTT---T................................................................................................................................................................................................................................................................................................................................................................2811.00100000000000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCG-AG--------------T---CCCCCACTC-T.........1811.00100001000000000000
......................................................GTATTTT-CGCA-GTGGG-------------------------TG.....................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGA---ATTGGCA-----------------TTAGCTC..........................................2011.00101000000000000000
droSec2
TGGTGGGGCTGCAGTTCTCCGGGAAGACGACGTTCGTCAATGTTATTGCAGTGAGTATTTT-CGCA-GTGGG-------------------------TGTGTGCGAAT---TCGTGT---GGGTGTATGGGTGAGA---GGGTGGTTT---TTTTTTTGTGTGCGGTCGTCTGTT------GAG--------------------GAGCGG-GGAGGG-G---------GTTCG---GGGAAAGCCGGG-AGATCAG------CTACTACT----------------TAAAGAGCA------T--------TACAAACCC-----------------------------------CCAGTG------------------------------------------------------------ACAAAGGA---ATTGGCA-----------------TTAGCTCA-AG--------------T---CCGCCACTC-TAAC----ATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............AGTTCTCCGGGAAGACGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001
........CTGCAGTTCTCCGGGAAGACGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
..................................................GTGAGTATTTT-CGCA-GTGGG-------------------------T......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
.......GCTGCAGTTCTCCGGGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
.........TGCAGTTCTCCGGGAAGACGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
.............GTTCTCCGGGAAGACGACGTTCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
dm3
TAGTGGGGCTGCAGTTCTCCGGGAAGACGACGTTCGTCAATGTTATTGCAGTGAGTATTTT-CGCA-GTGGG-------------------------TGTGTGCGAAT---TCGTGT---GGGTGTATGGGTGAGA---GGGTGGTTT---TTTTTG--TGTGTGGTTGTCTGTT------GTGT-------------------GGGTGG-GGAGGG-G---------GTTCA---CGGAAAGCCGGG-GGATCAG------CTACTACT----------------TAAAAAGCA------T--------TACAAACCC-----------------------------------CCAGTG------------------------------------------------------------ACAAAGGA---ATTGGTC-----------------TTAGCTTG-AT--------------T---CCCCCACTC-TAAC----ATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................................................................................................................................................................................................................GGG-G---------GTTCA---CGGAAAGCCGG.................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TGGGGCTGCAGTTCTCCGGGAAGACG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
TAGTGGGGCTGCAGTTCTCCGGGAAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TGGGGCTGCAGTTCTCCGGGAAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...TGGGGCTGCAGTTCTCCGGGAAGACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GCAGTTCTCCGGGAAGACGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................GT---GGGTGTATGGGTGAGA---GGGTGG.......................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000100000000000
.................TCCGGGAAGACGACGTTCGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000010000000000000000000
.................................................................................................TGTGTGCGAAT---TCGTGT---GGG.............................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TGGGGCTGCAGTTCTCCGGGAAGACGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
......................................................................................................................................GA---GGGTGGTTT---TTTTTG--TGTG.....................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010
.......................................ATGTTATTGCAGTGAGTATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000100000000000000000000
............AGTTCTCCGGGAAGACGACGTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GCTGCAGTTCTCCGGGAAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GGGAAGACGACGTTCGTCAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................TT---TTTTTG--TGTGTGGTTGTCT............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................CCC-----------------------------------CCAGTG------------------------------------------------------------ACAAAGGA---A........................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GCTGCAGTTCTCCGGGAAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGA---ATTGGTC-----------------TTAGCTTG-........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................TGT-------------------GGGTGG-GGAGGG-G---------GTTC................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TGCAGTTCTCCGGGAAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................T------GTGT-------------------GGGTGG-GGAGGG-G---------GTT.................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.......................................................................................................................................................TTTTTG--TGTGTGGTTGTCTGT..........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.......GCTGCAGTTCTCCGGGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..........GCAGTTCTCCGGGAAGACGACGTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................G--TGTGTGGTTGTCTGTT------GTGT-------------------GGG.........................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.........................................................................................................................GGTGTATGGGTGAGA---GGGTGG.......................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
..........GCAGTTCTCCGGGAAGACG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.........................................................TTTT-CGCA-GTGGG-------------------------TGTGTGCG...............................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................AAT---TCGTGT---GGGTGTATGGGT....................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................CGCA-GTGGG-------------------------TGTGTGCGAAT---.........................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TGGGGCTGCAGTTCTCCGGGAAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CTGCAGTTCTCCGGGAAGACG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AGTTCTCCGGGAAGACGACGTTCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................AACCC-----------------------------------CCAGTG------------------------------------------------------------ACAAAGGA---A........................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................GTGGTTT---TTTTTG--TGTGTGG..................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GGA---ATTGGTC-----------------TTAGCTTG-AT--------------........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TACAAACCC-----------------------------------CCAGTG------------------------------------------------------------ACAAAGGA---.........................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................TGTT------GTGT-------------------GGGTGG-GGAGGG-G---------GTTC................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.......................................................................G-------------------------TGTGTGCGAAT---TCGTGT---GGG.............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................AGTATTTT-CGCA-GTGGG-------------------------TGT....................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................A---ATTGGTC-----------------TTAGCTTG-AT--------------T---CCCC................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
..............................................................................................................................ATGGGTGAGA---GGGTGGTTT---T................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.......................................................TATTTT-CGCA-GTGGG-------------------------TGTG...................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................GTCTGTT------GTGT-------------------GGGTGG-GGAG.................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................GGTTT---TTTTTG--TGTGTGGTTG...............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................TGCAGTGAGTATTTT-CGCA-GT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
....................................................................................................GTGCGAAT---TCGTGT---GGG.............................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GTGGGGCTGCAGTTCTCCGGGAAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.........................................................................................................................GGTGTATGGGTGAGA---GG...........................................................................................................................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..GTGGGGCTGCAGTTCTCCGGGAAGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.........TGCAGTTCTCCGGGAAGACGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..............................................................................................................................................................................T------GTGT-------------------GGGTGG-GGAGGG-G---------G...................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................ACGACGTTCGTCAATGTTAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TTCTCCGGGAAGACGACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CTGCAGTTCTCCGGGAAGACGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TCTCCGGGAAGACGACGTTCGTCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GTTCTCCGGGAAGACGACGTTCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............GTTCTCCGGGAAGACGACGTTCGTCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTGAGTATTTT-CGCA-GTGGG-------------------------T......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
TAGTGGGGCTGCAGTTCTCCGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AGTTCTCCGGGAAGACGACGTTCGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AGTGGGGCTGCAGTTCTCCGGGAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TTTTG--TGTGTGGTTGTCTGTT------...................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AGGA---ATTGGTC-----------------TTAGCTT..........................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
...........................CGACGTTCGTCAATGTTATTGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GGGGCTGCAGTTCTCCGGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TGGTGGGGCTGCAGTTCTCCGGGAAGACGACGTTCGTCAATGTTATTGCAGTGAGTATTTT-CGCA-GTGGG-------------------------TGTGTGCGAAT---TCGTGT---GCGTGTATGGGTGAGA---GGGTGGTTT---TTGTGT---GTGT----GTGTGTG------GTGT---------------------GCGG-GGTAGG-G---------GTGCA---GGGAAAGCCGGG-GGATCAG------CTACCACT----------------TAAAGAGCA------T--------TACAAACCC-----------------------------------CCCGTG------------------------------------------------------------ACAAAGGA---TTGACA--T-----------------AGCGCG-G---------------T---TCCCCAATG-TAAC----ATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................G------------------------------------------------------------ACAAAGGA---TTGACA--T-----------------AGCGC..........................................2111.0010000100
....................................................................................................................T---GCGTGTATGGGTGAGA---GG...........................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
.......................AAGACGACGTTCGTCAATGTTATTGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
droYak3
TGGTGGGACTGCAGTTCTCCGGGAAGACGACGTTCGTCAATGTTATTGCAGTGAGTATTTT-CGCA-GTGGG-------------------------TGTGTGCGAAT---TCGTGT---GGGTGTATGGGTGAGA---GGGTGGTTT---TTTTTTTGTGTGT----GACTGTT------GTGTGGGGAG---------------AGGG-GGAGCG-G---------GTGCA---GGGAAAGCCGGG-GGATCAG------CTACTACT----------------TAAAGAGCA------T--------TACAAACCC-----------------------------------CCAGTG------------------------------------------------------------ACAAAGGA---AATGGCA-A-----------------ACCGCG-GT--------------T---CCCCCACTC-TAAC----TTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGGA---AATGGCA-A-----------------ACCGC..........................................2011.00101000000000
........CTGCAGTTCTCCGGGAAGACGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
.......................................................................................................................................................................................GTGGGGAG---------------AGGG-GGAGCG-G---------GTGC................................................................................................................................................................................................................................................................................2311.00100100000000
.....GGACTGCAGTTCTCCGGGAAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
droEug1
TCGTGGGGCTGCAATTCTCAGGGAAGACGACGTTCGTCAATGTTATTGCAGTGAGTATTT--TGCA-GTGGG-------------------------TGTGTGCGAAT---TTGTAC---GGGTGTATGGGTGAGAGGAGGGTAGTTT---TTTTTT---------------GTT------GTGC----AG---------------AGGG-GGAGAG-G---------GTGCA---GAGAAAGCCGGG-GGATCAA------CTATGACTAAA------TGTCGGTTAA----------------------ACCAACGT--------C--------------------------CTAGTC------------------------------------------------------------ACAAAGGA---ATTGATT-A-----------------AGTCCA-TT--------------GACTTTCCCACTT-TCACCCCTTTSizeHit CountTotal NormTotal
No Reads
droBia1
TGGTGGGGCTGCAGTTCTCCGGGAAGACGACGTTCGTCAATGTTATTGCAGTGAGTATTT--CGCA-CTGGGCGT---------------GTGTGAGAGTGTGCGAAT---T-TTGC---CAGAGTGTGGGTGGAG---GGGTGGTTT---TTTTTG---------------GT-------------TCGGAGGAGGGTCGTTGCAG-------GGG-G---------GTGCA---GAGAAAGCCGGG-GGATCGA------CCATGTCTATA------GGTCGGCTGAAGAACC------C--------CACCAACGC-----------------------------------CTAATC------------------------------------------------------------ACAAAGGA---ATTGCC--T-----------------GGC--------------------T---CCCCCACTT-TCCC----TTSizeHit CountTotal NormTotal
No Reads
droTak1
TGGTGGGGCTGCAGTTCTCCGGGAAGACGACGTTCGTCAATGTTATTGCAGTGAGTATTT--CGCA-CTGC---------------TT--GTGTGTGTGTGTGCGAAT---T--TGC---CAGTGTATGGGTGGGA--AGGGTGGTTT---TTTTTT---G---------------------------------------------G-------GGG-G---------GCGCA---GAGAAAGCCGGG-GGATCGG------CCATGACTATATC-----GTCGGTTAAAGAACC----AAA--------CACAAACCC-----------------------------------CTAATC------------------------------------------------------------ACAAAGGA---ACTGCTA-G-----------------AGCTCA-GT--------------G---CCCCCACTT-TCCC----TTSizeHit CountTotal NormTotal
No Reads
droEle1
TGGTGGGGCTGCAATTCTCCGGGAAGACGACGTTCGTCAATGTTATTGCAGTGAGTATTT--CGCAGGGCGGTGTGTGC-GTTTGTGT--GTGTGTGTGTGTGCGAAT---TG--GC---AAGTGTATGGGTGAGA---GGGTGGTTT---TTTTTTTGTG----------------------------------------------AGGGGAAGGGGGCTGT---TGGTGGA---GAGAAAGCCGGG-GGATCAG------CTATGACTAAA------TGTCGGTTAAAGTATA------A--------TACAAACCC--------C--------------------------CAAATC------------------------------------------------------------ACAAAGGA---ATTACA--T-----------------ACCT-------------------T---CCCCAACTT-TCCC----TTSizeHit CountTotal NormTotal
No Reads
droRho1
TGGTGGGGCTGCAATTCTCCGGGAAGACGACGTTCGTCAATGTTATTGCAGTGAGTATTT--CGCA-GTGGGTGT---------------------ATGTGTGCGAAT---T--TGC---CAGTGTATGGGTGAGA---GGGTGGTTT---TTTTTTT-TG------------------G------GT---------------------G-GGCGGG-G----GTTTGGTGTG---GAGAAAGCCGGG-GGATCAG------CTATGACTAAA------TGTCAGTTAAAGAACA------A--------AACAAACCC-----------------------------------CCAGTC------------------------------------------------------------ACAAAGGA---ATTACC-------------------------------------------T---TCCCCAATT-TCCC----TTSizeHit CountTotal NormTotal
No Reads
droFic1
TCGTGGGACTGCAGTTCTCCGGGAAGACGACGTTCGTCAATGTTATTGCAGTGAGTATTTTGCACA-GTGGG-------------------------TGTGTGCGGGT---TTCTGT---GAGTGTGTGGGTGAGA---GGGTGGTTT---TTTC---------------------------------------------------G-------GGG-G---------GTGGA---GAGAATGCCGGG-GGATCAA------CTATGACTAAA------AGTCGGTCGAAGAATA------A--------TGCAAACC------------------------------------CGAAAC------------------------------------------------------------ACAAAGGA---ATTGCC--T-----------------CCCTTT-T---------------G---ACCCCACTT-TCCC----TTSizeHit CountTotal NormTotal
No Reads
droKik1
TGGTGGGGCTGCAGTTCTCGGGCAAAACGACGTTCGTCAATGTTATTGCAGTGAGTACTT--CTTC-GTGGGTGTGTGT---------GTGTGTGTGTGCGTGCGAAT---T-TTGCTACAAGTGTATGGGTGAGA---GGGTGGTTT---TGCTAG--------------GGGCAGGGCGGC----GAGGCGAAG------------------GCG-G---------GGTGA---GAGAAAGCCGGG-GGA----------ATATGACTAAA------AGTCAGT-AAAAAGTA------A--------TACTAAACC--------T--------------------------TAGCTG------------------------------------------------------------ACAAAGGCGGTATGG--TATGGCCAT-----TGTTTTGGTAGGGAGCTCCCTAGGAAACAC-C-TTGCTGTTTCGGAC----TTSizeHit CountTotal NormTotal
No Reads
droAna3
TGGTGGGACTGCAATTCTCCGGGAAAACTACGTTTGTCAATGTTATTGCAGTGAGTATTTT-CAT--T-----T---------TGTTTGTTTGTGTGTGTGTGCGAAT---TTTCGC---TAGTGTGCAGGGGCGA---G-GTGC------------------------------------------------------TGTAACAGGGG--------GGTGG---TCGCCCA---GTGAAAGCCGGGGGGACCGG------GAATGACTACTGTA---TGTTAGT-AACTAATA------A----ATGTCAGGAAACT--------G--------------------------CAAAAC------------------------------------------------------------ACAAAGGA---ATTCGA--T-----------------AGC-------------------------CAACGATT-ATTT----TASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TGGTGGGACTGCAATTCTCTGGGAAAACGACGTTCGTTAATGTTATTGCAGTGAGTATTTT-CAT--T-----T---------TGTTTGGTTGTGTGTGTGTGCGAATTTTT-TTGC---TTGTGTGCAGGGGGCG--AG-GTGC------------------------------------------------------TGTAACAGGGG--------GGTGG---TCGCGCA---GTGAAAGCCGGGGGGATCGGGTATAACTACTACTAAA------TGTTAGT-AACTAATA------A----AGGGCAGGAACCC--------G--------------------------CAAAAC------------------------------------------------------------ACAAAGGG---ATTGGA--TGGCCAAAGATGTAT-TTCGGTTT-AG--------------T---CCACGGGTG-CGCC----TTSizeHit CountTotal NormTotal
No Reads
dp5
TAGTGGGGCTGCAGTTCTCGGGGAAGACAACGTTCGTCAATGTTATTGCAGTGAGTATTTG-CAT--ATGGGTGTGTGTGTTC--------AGTGACAGTGTGCTGTT---T-TTGC---CAATGTGTGCGA--GG---GGGTTGCTTGATTGCT---G-----------CCGTTATGGC------GTAGGAGGAGGCC---------------------CGG---AGGGGCA---GAGAAAGCCGGG-G-----A------CTATGACTATTCTATC---------A---AATAATACAAACGAA-----ATTAACCC-------CG--------------------------CGACTGTCAAAAGAATCGCAAAGAGAGAGAGA--GAGAGAGAGAGGGAGAGCACAGACCCTCGCTCCCTGACG-AGTGAGC--AATCACCAT-----GAACTTGGCCCG-AGG-------------T-C-TCGCTATTT-GGTT----ATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....GGGGCTGCAGTTCTCGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000001
.............GTTCTCGGGGAAGACAACGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.............GTTCTCGGGGAAGACAACGTTCGTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
......................GAAGACAACGTTCGTCAATGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..GTGGGGCTGCAGTTCTCGGGGAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.......................................ATGTTATTGCAGTGAGTATTTG-CA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
...TGGGGCTGCAGTTCTCGGGGAAGACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000010
...............................................................................................................................................TGCTTGATTGCT---G-----------CCGTTAT.......................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.AGTGGGGCTGCAGTTCTCGGGGAAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000001
............AGTTCTCGGGGAAGACAACGTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100000
..........................................................................................................................................................................................................................................................................................................................................................................................GAGAGAGA--GAGAGAGAGAGGGA......................................................................................................22200.0510000001000
droPer2
TGGTGGGGCTGCAGTTCTCGGGGAAGACAACGTTCGTCAATGTTATTGCAGTGAGTATTTG-CAT--ATGGGTGTGTGT-TTC--------AGTGACGGTGTGCTGTT---T-TTGC---CAATGTGTGCGA--GG---GGGTTGCTTGATTGCT---G-----------CCGTTATGGC------GTAGGAGGAGGCC---------------------CGG---AGGGGCA---GAGAAAGCCGGG-G-----A------CTATGACTATTCCATC---------A---AATAATACAAACGAA-----ATTAACCC-------CG--------------------------CGACTGTCAAAAGAATCGCAAAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGCACAGACCCTCGCTCCCTGACG-AGTGAGC--AATCACCAT-----GAACTTGGCCCG-AGG-------------T-C-TCGCTATTT-GGTT----ATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........TGCAGTTCTCGGGGAAGACAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
........................................................................................................................CAATGTGTGCGA--GG---GGGTTGCT.....................................................................................................................................................................................................................................................................................................................................................................2211.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACCAT-----GAACTTGGCCCG-A.......................................2111.001010000
droWil2
TTGTCGGACTACAATTCTCGGGCAAGACAACTTTCGTCAATGTTATTGCAGTGAGTATATTTCGCATGTGGG-------------------------CGTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......GACTACAATTCTCGGGCAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
.....GGACTACAATTCTCGGGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.....GGACTACAATTCTCGGGCAAGACAACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
droVir3
TGGTCGGCTTGCAATTCTCAGGCAAAACCACCTTCGTCAATGTTATTGCAGTGAGTATGCT-TTT--T-----T---------TTTTTTTT---------TAGCAAA---------T---AAGTGTGTGTGTGAGG---CGGCGGCTG---TTCTTT---G------------------C------GG------------------GCGC-G---GA-G----GTAA---GCAGAGCAGTGTGCCGCA-A-----G------CTATGCCAATGCAATAG--CCAGAGGAAGAA--------A--CC----AATAAAC-TAAATGC--CTTGGACAGAAGGAGAAGCGCGGGGCGCCAGAC-------------------------ACAAATTGTGACAAATCGAGC-------------------GTTGTTGTTG--TTTGGCCG------------TT------T--------------T---CTATTGATT-TGCC----TTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............ATTCTCAGGCAAAACCACCTTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
..GTCGGCTTGCAATTCTCAGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
..........GCAATTCTCAGGCAAAACCACCTTCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...............................CTTCGTCAATGTTATTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................CGGCTG---TTCTTT---G------------------C------GG------------------GCGC-.....................................................................................................................................................................................................................................................................................................2011.001100000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TTGTGACAAATCGAGC-------------------GTTGT..........................................................................2111.001000000000100000000000000000000000000000000000000000000000000000
droMoj3
TTGTCGGCCTCCAATTCTCAGGCAAAACCACATTCGTCAATGTTATTGCAGTGAGTATTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................CACATTCGTCAATGTTATTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
................................TTCGTCAATGTTATTGCATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.251100000
droGri2
TAGTCGGACTGCAGTTCTCAGGCAAGACGACGTTCGTCAATGTTATTGCAGTGAGTATTTATTGCA-AACAA-------------------------T------GAAA---TGGTGT---GGAA--ATGGG--------CGGTGA-------------------------CTGTT------CCGA---------------------GCGG------------------GGGAA---GAGTTTGCCGCA-G-----T------CTATGACAATGCAATCG--GGAGAGAAAAAA--------A--GA-----AGAAACCTAAACTAAAG--------------------------CAAATG------------------------------------------------------------ACAAATGA---ATCGCC--G-----------------TTT--------------------T---TTTTCCATT-TGCC----ATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..GTCGGACTGCAGTTCTCAGGCAAGACG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00110
............AGTTCTCAGGCAAGACGACGTTCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110
..........GCAGTTCTCAGGCAAGACGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101
....................GGCAAGACGACGTTCGTCAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
..................CAGGCAAGACGACGTTCGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101

Generated: 05/18/2015 at 10:04 AM