ID:

dsi_5166

 Coordinate:

2r:3867507-3867566 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.1

Flybase annnotation

exon [2r_3867567_3868203_-]; CDS [2r_3867567_3868203_-]; CDS [2r_3867340_3867506_-]; exon [2r_3867251_3867506_-]; intron [2r_3867507_3867566_-]

No Repeatable elements found

Sense Strand Reads

##################################################------------------------------------------------------------##################################################
GGTGCCCTACACCTACTTGCCCTTCGGCGTGGGACCTCGGAACTGCATAGGTCAGTTAATCAAAGTCTTACGATAAGGAGGACAGTTTAAATCATACTATTTCTTTGTAGGAAACCGATATGCCTTGATGCAGGTCAAGGGTATGCTCTTTAACCTACTT
**************************************************......................(((((((((..(((.........))).)))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 M024
male body		 M025
embryo
 GSM343915
embryo
 M023
head
 SRR618934
dsim w501 ovaries
 SRR902009
testis
 SRR902008
ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
.................TGCCCTTCGGCGTGGGACCTCGGAACTG................................................................................................................... 28 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
.....................CTTCGGCGTGGGACCTCGGAACTGCATA............................................................................................................... 28 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
............................GTGGGACCTCGGAACTGC.................................................................................................................. 18 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0
.....................CTTCGGCGTGGGACCTCGGAACTGC.................................................................................................................. 25 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
................TTGCCCTTCGGCGTGGGACC............................................................................................................................ 20 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0
..............................GGGACCTCGGAACTGCATAGG............................................................................................................. 21 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
..............ACTTGCCCTTCGGCGTGGGACCTCGGA....................................................................................................................... 27 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0
.......................TCGGCGTGGGACCTCGGAACTGCATAG.............................................................................................................. 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
GGTGCCCTACACCTACTTGCCCTTCGGCG................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................TGATGCAGGTCAAGGGTAC................ 19 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............CTACTTCCCCTTCGGCGTGGGACCTCG......................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................TCGGCGTGGGGACTCGGAACC.................................................................................................................... 21 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0
...............................................................................................................................ATGCAGGTCAAGGGTATGCTCG........... 22 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.....................CTTCGGCGTGGGACCTCGGAACTGCATAG.............................................................................................................. 29 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
................................................................................................................AACCGATATGCCTTGATGCAGGT......................... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
........................CGGCGTGCGACCTCGGAACTGC.................................................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................ATAGGAAACCGATATGCCTTGATGCA............................ 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........CCTACTTGCCCTTCGGCGTGGGACCTC.......................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................AACCGATATGCCTTGATGCAGG.......................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............ACTTGCCCTTCGGCGTGG................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................CGATATGCCTTGATGTAGGTCAAGGGT.................. 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...........................................................................................................TAGGAAACCGATATGCCTTG................................. 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................................................................................................AACCGATATGCCTTGATGCA............................ 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
..............................................................................................................................GATGCAGGTCAAGGGTAT................ 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
........................CGGCGTGGGACCTCGGAACTGC.................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................TGCCCTTCGGCGTGGGACCTC.......................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........................CGCGGGACCTGGGAACTGCA................................................................................................................. 20 2 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.............................TGGGACCTCGGAACTGCATAGGAAA.......................................................................................................... 25 2 1 1.00 1 0 0 0 0 0 0 1 0 0 0
.........................................................AATCAAAGTCTTACGATAAGGAGGAC............................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................GGTCAAGGGTATGCTCTTTAACC..... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..........................................................................................................ATAGGAAACCGATATGCCTTGATGCAG........................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................GATGCAGGTCAAGGGTATGCTCT........... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............CTACTTGCCCTTCGGCGTGGGACCTCG......................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................GTCAAGGGTATGCTCTTTAACCT.... 23 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................CAAGGGTATGCTCTTTAACCT.... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................GATGCAGGTCAAGGGTATGCTCTTTAAC...... 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................GATGCAGGTCAAGGGTATGCTC............ 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
................TTGCCCTTCGGCGTGGGACCTC.......................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................TTCGGCGTGGGACCTCGGAA...................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.........CACCTACTTGCCCTTCGGCGTG................................................................................................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
......................TTCGGCGTGGGACCTCGGAACTGCATA............................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................................GTCAAGGGTATGCTCTTTAACC..... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................TCGGCGTGGGACCTCGGAACT.................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................GCCCTTCGGCGTGGGACCTC.......................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............................GTGGGACCTCGGAACTGCATAGG............................................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
................................GACCTCGGAACTGCATAGGA............................................................................................................ 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................GATGCAGGTCAAGGGCAT................ 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............CTACTTGCCCTTCGGCGTGGGACCTC.......................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
............CTACTTGCCCTTCGGCGTG................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................ATATGCCTTGATGCAGGTCAAG..................... 22 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................GTCAAGGGTATGCTCTTTAAC...... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................GGAAACCGATATGCCTTGATGCAG........................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.....................CTTCGGCGTGGGACCTCGGAA...................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
............CTACTTGCCCTTCGGCGTGGGACCT........................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................................GATATGCCTTGATGCAGGTC........................ 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
...............CCTGCGCTTCGGCGTGGG............................................................................................................................... 18 2 5 0.20 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................GTTGTAGGACTCCGATATG...................................... 19 3 5 0.20 1 0 0 1 0 0 0 0 0 0 0
.................................ACCTGGGAACTGCAT................................................................................................................ 15 1 7 0.14 1 0 0 0 0 0 1 0 0 0 0
.........................GGCGTGGGGACTCGGAACC.................................................................................................................... 19 3 12 0.08 1 0 0 0 0 1 0 0 0 0 0
..........................................................ATCAAAGTCCGACGATA..................................................................................... 17 2 13 0.08 1 0 0 0 0 0 0 0 1 0 0
................................................................GTCTAACCGTAAGGAGGA.............................................................................. 18 3 15 0.07 1 0 0 0 0 0 1 0 0 0 0
..................ACGCTTCGGCGTGGGA.............................................................................................................................. 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 1
.................................ACCTGGGAACTGCATG............................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

CCACGGGATGTGGATGAACGGGAAGCCGCACCCTGGAGCCTTGACGTATCCAGTCAATTAGTTTCAGAATGCTATTCCTCCTGTCAAATTTAGTATGATAAAGAAACATCCTTTGGCTATACGGAACTACGTCCAGTTCCCATACGAGAAATTGGATGAA
**************************************************......................(((((((((..(((.........))).)))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:3867457-3867616 - dsi_5166 GGTGCCCTACACCTACTTGCCCTTCGGCGTGGGACCTCGGAACTGCATAGGTCAGTTAA--TCAAAGTCTTACGAT---------------------------------------------------------------AAGG---------------------------------AGGACAGTTTAA----------------------AT-CATACTA----------TTTCT----TTGTAGGAAACCGATATGCCTTGATGCAGGTCAAGGGTATGCTCTTTAACCTACTT
droSec2 scaffold_1:687146-687305 - GGTGCCCTACACCTACTTGCCCTTCGGCGTGGGACCTCGGAACTGCATAGGTCAGTTAA--TCAAAGTGTTATGAT---------------------------------------------------------------AAGG---------------------------------AGGACAGTTAAA----------------------AT-CATACTA----------TTTCT----TTGTAGGAAACCGATATGCCTTGATGCAGGTCAAGGGTATGCTCTTTAACCTACTG
dm3 chr2R:3017998-3018157 - GGTGCCCTACACCTACTTGCCATTCGGCGTGGGACCTAGGAATTGCATAGGTCAGTTAA--TAAAAGTGTTACGAT---------------------------------------------------------------AAGG---------------------------------AGGACAGTTTAA----------------------AT-CATACAA----------TTTCT----TTGTAGGAAATCGATATGCCTTGATGCAGGTCAAGGGTATGCTCTTCAACCTACTG
droEre2 scaffold_4929:19549562-19549722 + AGTGCCCTACACCTACTTGCCCTTTGGCGTGGGACCCCGGAACTGCATAGGTCAGTCAA--TCGAAGTGTTAGGAT---------------------------------------------------------------GTGG---------------------------------AGCAAGGATTCA----------------------ATATGAACAT----------TTTCT----TTACAGGAAACCGATATGCCCTGATGCAGGTCAAGGGTATGTTATACAATCTGCTG
droYak3 2L:15727875-15728038 - AGTGCCCTACACCTACTTGCCCTTTGGCGTGGGACCCAGGAATTGCATAGGTGAGTTAG--CCAACGGGTTACGACATGGAGGAGAA---------------------------------------------------------------------------------------------AAGCTTGA----------------------AGATAAACAT----------TTGCA----TTGCAGGAAATCGATATGCCTTGATGCAGGTCAAGGGTATGCTATACAATCTACTG
droEug1 scf7180000409672:5043034-5043205 - GGTGCCGTACACCTATTTACCATTCGGCGTAGGACCCCGAAACTGCATTGGTAAGTTAA--GACATG--TTCCCAA---------------------------------------------------------------TCGGAATTTAC--AAAA-TG--------------------------AAA----------------------AC-CGTACTATGTATATGTAAATTC----TTCCAGGAAATCGATATGCATTGATGCAGGTCAAGGGAATGCTGTACAACCTGCTG
droBia1 scf7180000302292:3121733-3121918 + GGTGCCCTACAGCTATTTGCCTTTCGGCGTGGGACCTCGGAACTGCATAGGTGAGTTTT-------------------GGGGGAATATTTCTTT---------------G-AGATTTCTTTTGATGCT-----T-----T------GG--TTATC-TATTTGC-TATTA--C-----------------------------------------AATG-----TATTC--AAATAT----TTGCAGGGAATCGGTATGCTTTGATGCAGGTCAAGGGCTTCCTCTTCAACCTGCTG
droTak1 scf7180000415382:260591-260766 - GGTGCCCTACACCTATTTGCCTTTTGGAGTGGGACCTCGCAGCTGTATTGGTAAGCAAA--TACTTG-------AT---GCTTTAAG----------------------------------T-----------------------TTCGG--TCCCC-ACTTCTTAT---TTA-------------AA----------------------TCA-ATACTA--TTTTA--TCCAAA----CCTTAGGAAATCGCTATGCCTTGATGCAGGTCAAGGGCATACTATACAACCTACTG
droEle1 scf7180000491265:146081-146320 - GGTGCCATACACCTATTTGCCTTTCGGGGTGGGACCTCGAAACTGTATAGGTGAGTTGA-ACCTTC-T---AAGACATGGGCTAAAATTGTTTTTAAAGGGGTATCTTGGTACACCTCTTTGCACAATTTGAGCT----GGGT----ACG--ACCA-TGAA---------------AAACCAACTATATCTGAATTATATTTACTACAT--------------------CCACTT----CCTCAGGAAATCGCTATGCTTTGATGCAAGTCAAGGGCATGCTGTACAATCTGCTG
droRho1 scf7180000779932:301613-301778 - CTTGCCATTTACCTATATACCCTTTGGTGCTGGACCTCGAAGCTGCATAGGTAAGGAAA--TCTCATAAATAT-----------------------------------------------------CC-----C-----T------AG--AAAAT-AAATAAT-TAATA--A-----------------------------------------TAAA-----TATTA--ATCAAT----CCACAGCCAGCCGATTTGCCCAGATGCAGGTGAAGGGCATGTTGTACCACCTGCTG
droFic1 scf7180000453809:268675-268842 - TGTGCCATTTACTTATATGCCATTTGGAGCTGGACCCCGAAGTTGTATTGGTGAGGAGA--TCTACTGA-----------------------------------------------------ATTTAG-----T-----------TGTTG--AACC-TATAAA-TAATA--TA-------------AT----------------------A-----------CAATGATTATCCT----CTACAGCCAATAGATTTGCCCAGATGCAGGCGAAGGGATTGTTGTTCCACCTTCTT
droKik1 scf7180000302640:133786-133959 - TGTGCCATATACTTATATACCCTTTGGCGCGGGTCCCCGCAGCTGCATAGGTAAGCCAA--CTTCTGT----------GAAGGAAT-------------------------------------------------------------CAG--ATCCC-ACATTTTAC-CTTA----T---CAGCTTAT----------------------CA-AACGAAA----------TTTTA----TTTCAGCCAATCGATTTGCTCACATGCAGGCCAAGGGAATGCTATATCACCTGCTG
droAna3 scaffold_13266:3256156-3256318 - GGTTCCCTACACCTATTTGCCATTTGGCGTTGGTCCTCGTAACTGCATTGGTGAGTTAA--TATACATA-----------------------------------------------------TTTTAT-----A-------------------------------TA---TTTTAGATCC-------------------------------AA-ATTCTA--CCCTCTTTTCCCT----TGTTAGGCAATCGCTATGCCCTGATGCAGGTCAAGGGAATGCTGTATAACCTGATT
droBip1 scf7180000396427:1721236-1721396 - AGTTCCCTACACTTATTTGCCGTTCGGAGTGGGTCCCCGTAACTGCATTGGTGAGTTAA--TCTTTCTGTCT------------------------------------------------------AT-----CTAGACAAGA---------------------------------TCGGCTCTCTAT----------------------AC-CA-------------TTACTCT----TCGTAGGAAATCGCTATGCCCTGATGCAGGTCAAGGGAATGCTGTACAACCTGATT
dp5 3:1303511-1303678 - AGTGCCTTACACATATTTGCCGTTTGGAGTAGGTCCCCGAAACTGCATAGGTGAGTCTG--CTTCTCC----------GAAGGAAAT----------------------------------ATTTTGT------------------------------------TAG---TTT-------------AA----------------------CCA-TTACCA--TTATCATTTCTAT----CCCCAGGCAATCGATATGCTCTGATGCAGGTCAAGGGAATGTTGTACAACCTCCTG
droPer2 scaffold_2:1477900-1478067 - AGTGCCTTACACATATTTGCCGTTTGGAGTAGGTCCCCGAAACTGCATAGGTGAGTCTG--CTTCTCC----------GAAGGAAAT----------------------------------ATTTTGT------------------------------------TAG---TTT-------------AA----------------------CCA-TTACCA--TTATCATTTCTAT----CCCCAGGCAATCGATATGCTCTGATGCAGGTCAAGGGAATGTTGTACAACCTCCTG
droWil2 scf2_1100000004513:2618873-2619027 - GGTGCCATATACGTATCTGCCTTTTGGTGTGGGACCACGCAATTGCATTGGTAAGTCAG--CCTCA-TCTTATCTC---------------------------------------------------------------TTGG---------------------------------AAACCGATTTTA----------------------AT-TGA--------------CTTAT----TTTCAGGCAATCGATATGCTCTAATGCAGGCCAAGGCCATGCTCTATAATCTTGTA
droVir3 scaffold_10324:1181852-1182013 - CGTGCCCTACACGTATCTGCCCTTCGGCGCAGGTCCTCGCAATTGCATAGGTGAGTGCGAACCTTT-T-------------------------------------------------------CTTGT------------------------------------TTA---TTT-------------AT---GTGTAGTATTTA------TT----------------ATTTTTGATTCCACGCAGGCAATCGTTATGCTCTGATGCAGGCCAAGGCCATGTTATACAACCTGGTG
droMoj3 scaffold_6540:16660502-16660667 + TCTGCCATTTACGTATTATCCTTTCGGCGTAGGGCCACGCAATTGCATAGGTGAGTGGC--AGGCTCT-----GAT---ATCTAAGG----------------------------------TATTTGT------------------------------------TAA---TAT-------------TT----------ATTTA------TT----------------AATTATGATTT-CTCTAGGCTCCCGATTCGCATTACTTGAGGCCAAAGCTGTGATCTACTATCTGCTG
droGri2 scaffold_15245:9260656-9260819 - GGTACCCTACTCCTATTTGCCCTTCGGCGTAGGACCACGTAGCTGTATAGGTATGTTCT-AGCTCCAA----------AAAGATAAC----------------------------------ACTCGAA------------------------------------TAA---TAT-------------G--------------CATGTCTGTT----------------ACTTTTGA----TTGCAGGAAATCGTTATGCTCTGATGCAGGCCAAGGCTATGTTGTACAATCTAGTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GGTGCCCTACACCTACTTGCCCTTCGGCGTGGGACCTCGGAACTGCATAGGTCAGTTAA--TCAAAGTCTTACGAT---------------------------------------------------------------AAGG---------------------------------AGGACAGTTTAA----------------------AT-CATACTA----------TTTCT----TTGTAGGAAACCGATATGCCTTGATGCAGGTCAAGGGTATGCTCTTTAACCTACTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................TGCCCTTCGGCGTGGGACCTCGGAACTG..........................................................................................................................................................................................................................................................2812.00202000000000000000
.....................CTTCGGCGTGGGACCTCGGAACTGCATA......................................................................................................................................................................................................................................................2812.00202000000000000000
............................GTGGGACCTCGGAACTGC.........................................................................................................................................................................................................................................................1812.00200020000000000000
.....................CTTCGGCGTGGGACCTCGGAACTGC.........................................................................................................................................................................................................................................................2512.00202000000000000000
................TTGCCCTTCGGCGTGGGACC...................................................................................................................................................................................................................................................................2012.00200200000000000000
..............................GGGACCTCGGAACTGCATAGG....................................................................................................................................................................................................................................................2112.00202000000000000000
..............ACTTGCCCTTCGGCGTGGGACCTCGGA..............................................................................................................................................................................................................................................................2712.00201010000000000000
.......................TCGGCGTGGGACCTCGGAACTGCATAG.....................................................................................................................................................................................................................................................2711.00110000000000000000
GGTGCCCTACACCTACTTGCCCTTCGGCG..........................................................................................................................................................................................................................................................................2911.00100010000000000000
....................................................................................................................................................................................................................................................................TGATGCAGGTCAAGGGTAC................1911.00101000000000000000
......................................................................................................................................................................................................................................................................ATGCAGGTCAAGGGTATGCTCG...........2211.00100100000000000000
.....................CTTCGGCGTGGGACCTCGGAACTGCATAG.....................................................................................................................................................................................................................................................2911.00101000000000000000
.......................................................................................................................................................................................................................................................AACCGATATGCCTTGATGCAGGT.........................2311.00100010000000000000
...........CCTACTTGCCCTTCGGCGTGGGACCTC.................................................................................................................................................................................................................................................................2711.00100010000000000000
.......................................................................................................................................................................................................................................................AACCGATATGCCTTGATGCAGG..........................2211.00100010000000000000
..............ACTTGCCCTTCGGCGTGG.......................................................................................................................................................................................................................................................................1811.00100010000000000000
..................................................................................................................................................................................................................................................TAGGAAACCGATATGCCTTG.................................2011.00100010000000000000
.......................................................................................................................................................................................................................................................AACCGATATGCCTTGATGCA............................2011.00100000000000100000
.....................................................................................................................................................................................................................................................................GATGCAGGTCAAGGGTAT................1811.00100000000000100000
........................CGGCGTGGGACCTCGGAACTGC.........................................................................................................................................................................................................................................................2211.00100010000000000000
.................TGCCCTTCGGCGTGGGACCTC.................................................................................................................................................................................................................................................................2111.00101000000000000000
.........................................................AA--TCAAAGTCTTACGAT---------------------------------------------------------------AAGG---------------------------------AGGAC..................................................................................................................2611.00101000000000000000
...........................................................................................................................................................................................................................................................................GGTCAAGGGTATGCTCTTTAACC.....2311.00100010000000000000
.....................................................................................................................................................................................................................................................................GATGCAGGTCAAGGGTATGCTCT...........2311.00100010000000000000
............CTACTTGCCCTTCGGCGTGGGACCTCG................................................................................................................................................................................................................................................................2711.00100010000000000000
............................................................................................................................................................................................................................................................................GTCAAGGGTATGCTCTTTAACCT....2311.00101000000000000000
..............................................................................................................................................................................................................................................................................CAAGGGTATGCTCTTTAACCT....2111.00100010000000000000
.....................................................................................................................................................................................................................................................................GATGCAGGTCAAGGGTATGCTCTTTAAC......2811.00101000000000000000
.....................................................................................................................................................................................................................................................................GATGCAGGTCAAGGGTATGCTC............2211.00100100000000000000
................TTGCCCTTCGGCGTGGGACCTC.................................................................................................................................................................................................................................................................2211.00101000000000000000
......................TTCGGCGTGGGACCTCGGAA.............................................................................................................................................................................................................................................................2011.00101000000000000000
.........CACCTACTTGCCCTTCGGCGTG........................................................................................................................................................................................................................................................................2211.00101000000000000000
......................TTCGGCGTGGGACCTCGGAACTGCATA......................................................................................................................................................................................................................................................2711.00101000000000000000
............................................................................................................................................................................................................................................................................GTCAAGGGTATGCTCTTTAACC.....2211.00100010000000000000
.......................TCGGCGTGGGACCTCGGAACT...........................................................................................................................................................................................................................................................2111.00101000000000000000
..................GCCCTTCGGCGTGGGACCTC.................................................................................................................................................................................................................................................................2011.00100010000000000000
............................GTGGGACCTCGGAACTGCATAGG....................................................................................................................................................................................................................................................2311.00100010000000000000
................................GACCTCGGAACTGCATAGGA...................................................................................................................................................................................................................................................2011.00100010000000000000
............CTACTTGCCCTTCGGCGTGGGACCTC.................................................................................................................................................................................................................................................................2611.00100010000000000000
............CTACTTGCCCTTCGGCGTG........................................................................................................................................................................................................................................................................1911.00101000000000000000
............................................................................................................................................................................................................................................................ATATGCCTTGATGCAGGTCAAG.....................2211.00100010000000000000
............................................................................................................................................................................................................................................................................GTCAAGGGTATGCTCTTTAAC......2111.00100010000000000000
....................................................................................................................................................................................................................................................GGAAACCGATATGCCTTGATGCAG...........................2411.00100010000000000000
.....................CTTCGGCGTGGGACCTCGGAA.............................................................................................................................................................................................................................................................2111.00101000000000000000
............CTACTTGCCCTTCGGCGTGGGACCT..................................................................................................................................................................................................................................................................2511.00101000000000000000
...........................................................................................................................................................................................................................................................GATATGCCTTGATGCAGGTC........................2011.00100000000000100000
droSec2
GGTGCCCTACACCTACTTGCCCTTCGGCGTGGGACCTCGGAACTGCATAGGTCAGTTAA--TCAAAGTGTTATGAT---------------------------------------------------------------AAGG---------------------------------AGGACAGTTAAA----------------------AT-CATACTA----------TTTCT----TTGTAGGAAACCGATATGCCTTGATGCAGGTCAAGGGTATGCTCTTTAACCTACTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................................................................................................................................................................................................................................................................GATGCAGGTCAAGGGTATGCTCT...........2321.5031200
............................GTGGGACCTCGGAACTGC.........................................................................................................................................................................................................................................................1821.0020011
.....................................................................................................................................................................................................................................................................GATGCAGGTCAAGGGTATGCTC............2220.5010100
............................GTGGGACCTCGGAACTGCATAGG....................................................................................................................................................................................................................................................2320.5010100
............................GTGGGACCTCGGAACTGCATA......................................................................................................................................................................................................................................................2120.5010100
........................................................................................................................................................................................................................................................ACCGATATGCCTTGATGCAGGTCAAGGGT..................2920.5010100
......CTACACCTACTTGCCCTTCGGCGT.........................................................................................................................................................................................................................................................................2420.5010100
........................CGGCGTGGGACCTCGGAACT...........................................................................................................................................................................................................................................................2020.5010010
........ACACCTACTTGCCCTTCGGCGTGG.......................................................................................................................................................................................................................................................................2420.5010010
........................CGGCGTGGGACCTCGGAACTGCATAGGA...................................................................................................................................................................................................................................................2820.5010100
..............................GGGACCTCGGAACTGCATAGG....................................................................................................................................................................................................................................................2120.5010100
......................................................................................................................................................................................................................................................................ATGCAGGTCAAGGGTATGCTCTTT.........2420.5010100
........................................................................................................................................................................................................................................................................GCAGGTCAAGGGTATGCTCTTT.........2220.5010100
..............................GGGACCTCGGAACTGCATAG.....................................................................................................................................................................................................................................................2020.5010100
.....................................................................................................................................................................................................................................................................GATGCAGGTCAAGGGTATGCTCTTT.........2520.5010010
.............................................................................................................................................................................................................................................................TATGCCTTGATGCAGGTCAAGGG...................2320.5011000
........................CGGCGTGGGACCTCGGAACTGC.........................................................................................................................................................................................................................................................2220.5010010
dm3
GGTGCCCTACACCTACTTGCCATTCGGCGTGGGACCTAGGAATTGCATAGGTCAGTTAA--TAAAAGTGTTACGAT---------------------------------------------------------------AAGG---------------------------------AGGACAGTTTAA----------------------AT-CATACAA----------TTTCT----TTGTAGGAAATCGATATGCCTTGATGCAGGTCAAGGGTATGCTCTTCAACCTACTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................GACCTAGGAATTGCATAG.....................................................................................................................................................................................................................................................1817.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................GATGCAGGTCAAGGGTATGCT.............2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001100000000
..................................................................................................................................................................................................................................................................................GGTATGCTCTTCAACCTACT.2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ATTCGGCGTGGGACCTAGGA..............................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000200000000
............................GTGGGACCTAGGAATTGCAT.......................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010010000000
...............................GGACCTAGGAATTGCATAG.....................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000001000000000000000000000010000000
............................GTGGGACCTAGGAATTGCATA......................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GGGACCTAGGAATTGCATA......................................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000
..............................GGGACCTAGGAATTGCATAG.....................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000100000000000
....................................................................................................................................................................................................................................................................TGATGCAGGTCAAGGGTAT................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................AGGAAATCGATATGCCTTGATG..............................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................AAGGGTATGCTCTTCAACCTA...2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ATTCGGCGTGGGACCTAGGAATTGC.........................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................GTGGGACCTAGGAATTGCA........................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......................TTCGGCGTGGGACCTAGGA..............................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................ATGCCTTGATGCAGGTCAAGGGT..................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................ATTCGGCGTGGGACCTAGGAATTGCAT.......................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................TTGCCATTCGGCGTGGGACC...................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GTGGGACCTAGGAATTGCATC......................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................TGATGCAGGTCAAGGGTATGCT.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................GCAGGTCAAGGGTATGCTC............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TGCCATTCGGCGTGGGAC....................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GGGACCTAGGAATTGCATAGG....................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................................................................................................................................................................................................................................GATGCAGGTCAAGGGTAT................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
........................CGGCGTGGGACCTAGGAAT............................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................................................................................................................................................CGATATGCCTTGATGCAGGT.........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................................................................AGGGTATGCTCTTCAACCT....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GTGGGACCTAGGAATTGC.........................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TGGGACCTAGGAATTGCAT.......................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......................TTCGGCGTGGGACCTAGGAATTGCATAG.....................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................CGTGGGACCTAGGAATTGCAT.......................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....................ATTCGGCGTGGGACCTAGGAATTGCATAG.....................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...GCCCTACACCTACTTGCCATTCGGCGT.........................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GGGACCTAGGAATTGCAT.......................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.......TACACCTACTTGCCATTC..............................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TTGATGCAGGTCAAGGGTATGCT.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......CTACACCTACTTGCCATTCGGCGT.........................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TTCGGCGTGGGACCTAGGAATTGC.........................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........ACACCTACTTGCCATTCGGCGT.........................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.......................TCGGCGTGGGACCTAGGAATTGCATAG.....................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.........................................................................................................................................................................................................................................................................CAGGTCAAGGGTATGCTCTT..........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................AGGAAATCGATATGCCTTGATGCAGGT.........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TTGCCATTCGGCGTGGGACCTA.................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................TGCAGGTCAAGGGTATGC..............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..................................................................................................................................................................................................................................................................CTTGATGCAGGTCAAGGGT..................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TGCCCTACACCTACTTGCC..................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
AGTGCCCTACACCTACTTGCCCTTTGGCGTGGGACCCCGGAACTGCATAGGTCAGTCAA--TCGAAGTGTTAGGAT---------------------------------------------------------------GTGG---------------------------------AGCAAGGATTCA----------------------ATATGAACAT----------TTTCT----TTACAGGAAACCGATATGCCCTGATGCAGGTCAAGGGTATGTTATACAATCTGCTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................................................................................................................................................GATATGCCCTGATGCAGGTCAAGG....................2411.0011000000
..................................................................................................................................................................................................................................................................CCTGATGCAGGTCAAGGGTATG...............2211.0010000100
......................TTTGGCGTGGGACCCCGGAACTGC.........................................................................................................................................................................................................................................................2411.0010000010
......................TTTGGCGTGGGACCCCGGAACTGCAT.......................................................................................................................................................................................................................................................2611.0010000100
droYak3
AGTGCCCTACACCTACTTGCCCTTTGGCGTGGGACCCAGGAATTGCATAGGTGAGTTAG--CCAACGGGTTACGACATGGAGGAGAA---------------------------------------------------------------------------------------------AAGCTTGA----------------------AGATAAACAT----------TTGCA----TTGCAGGAAATCGATATGCCTTGATGCAGGTCAAGGGTATGCTATACAATCTACTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................................................................................................................................................................................................GATGCAGGTCAAGGGTATGCT.............21114.0014100001120000
.....................................................................................................................................................................................................................................................................GATGCAGGTCAAGGGTATGCTATACA........2618.00803000050000
....................................................................................................................................................................................................................................................................TGATGCAGGTCAAGGGTATGCTATACA........2713.00300000030000
............................GTGGGACCCAGGAATTGCAT.......................................................................................................................................................................................................................................................2013.00300000030000
.....................................................................................................................................................................................................................................................................GATGCAGGTCAAGGGTATGCTATACAAT......2813.00300000030000
....................................................................................................................................................................................................................................................................TGATGCAGGTCAAGGGTAT................1913.00300000030000
...........................................................................................................................................................................................................................................................GATATGCCTTGATGCAGGTCAAGGGT..................2612.00200000020000
....................................................................................................................................................................................................................................................................TGATGCAGGTCAAGGGTATGC..............2112.00200000020000
.....................................................................................................................................................................................................................................................................GATGCAGGTCAAGGGTATGCTAT...........2312.00200000020000
..............................GGGACCCAGGAATTGCATAGGA...................................................................................................................................................................................................................................................2212.00200000020000
..........................................................................................................................................................................................................................................................................AGGTCAAGGGTATGCTATACAAT......2312.00200000020000
.....................................................................................................................................................................................................................................................................GATGCAGGTCAAGGGTATGCTATA..........2412.00200000020000
.......................................................................................................................................................................................................................................................AATCGATATGCCTTGATGCAGGT.........................2312.00201000010000
.....................................................................................................................................................................................................................................................................GATGCAGGTCAAGGGTAT................1812.00201000010000
........ACACCTACTTGCCCTTTGGCGT.........................................................................................................................................................................................................................................................................2212.00201000100000
..........................................................................................................................................................................................................................................................CGATATGCCTTGATGCAGGTCAAGGGT..................2711.00100000010000
.....................................................................................................................................................................................................................................................................GATGCAGGTCAAGGGTATGCTATACAATC.....2911.00100000010000
...........................................................................................................................................................................................................................................................GATATGCCTTGATGCAGGTCA.......................2111.00100000010000
........................................................................................................................................................................................................................................................ATCGATATGCCTTGATGCAGGTC........................2311.00100000010000
.....................................................................................................................................................................................................................................................................GATGCAGGTCAAGGGTATGCTATAC.........2511.00101000000000
.....................CTTTGGCGTGGGACCCAG................................................................................................................................................................................................................................................................1811.00101000000000
..............................................ATAGGTGAGTTAG--CCAACGG...................................................................................................................................................................................................................................2011.00100000010000
....................................................................................................................................................................................................................................................................TGATGCAGGTCAAGGGTATG...............2011.00100000010000
..................GCCCTTTGGCGTGGGACCC..................................................................................................................................................................................................................................................................1911.00101000000000
......CTACACCTACTTGCCCTTT..............................................................................................................................................................................................................................................................................1911.00101000000000
.......................................................................................................................................................................................................................................................................TGCAGGTCAAGGGTATGCTATACA........2411.00100000010000
........................................................................................................................................................................................................................................................................GCAGGTCAAGGGTATGCTAT...........2011.00100000010000
..................GCCCTTTGGCGTGGGACCCA.................................................................................................................................................................................................................................................................2011.00101000000000
........................................................................................................................................................................................................................................................................GCAGGTCAAGGGTATGCTATACA........2311.00100000010000
..............................GGGACCCAGGAATTGCATAG.....................................................................................................................................................................................................................................................2011.00100000010000
..............................GGGACCCAGGAATTGCATA......................................................................................................................................................................................................................................................1911.00100000010000
...GCCCTACACCTACTTGCCCTTTGGCGT.........................................................................................................................................................................................................................................................................2711.00101000000000
...........................................................................................................................................................................................................................................................GATATGCCTTGATGCAGGTCAAGGGTA.................2711.00101000000000
.........................................................................................................................................................................................................................CAT----------TTGCA----TTGCAGGAAATCGA..........................................2211.00100000010000
..............................................................................................................................................................................................................................................................................CAAGGGTATGCTATACAAT......1911.00100000010000
........................................................................................................................................................................................................................................................ATCGATATGCCTTGATGCAGGTCAAGGGT..................2911.00100000010000
.........................................................................................................................................................................................................................................................TCGATATGCCTTGATGCAGGTCAAGG....................2611.00101000000000
.........................GGCGTGGGACCCAGGAATTGCA........................................................................................................................................................................................................................................................2211.00101000000000
............CTACTTGCCCTTTGGCGTG........................................................................................................................................................................................................................................................................1911.00101000000000
....................................................................................................................................................................................................................................................GGAAATCGATATGCCTTGATGCAGGTC........................2711.00101000000000
............................GTGGGACCCAGGAATTGCATAGGA...................................................................................................................................................................................................................................................2411.00100000010000
.....................................................................................................................................................................................................................................................................GATGCAGGTCAAGGGTATG...............1911.00100000100000
..........................................................................................................................................................................................................................................................................AGGTCAAGGGTATGCTATACA........2111.00100000010000
...........................................................................................................................................................................................................................................................GATATGCCTTGATGCAGGT.........................1911.00100000010000
..................................................GTGAGTTAG--CCAACGGGTT................................................................................................................................................................................................................................1911.00100000010000
............................................................................................................................................................................................................................................................ATATGCCTTGATGCAGGTCAAGG....................2311.00101000000000
............................GTGGGACCCAGGAATTGCATA......................................................................................................................................................................................................................................................2111.00100000010000
......................................................................................................................................................................................................................................................AAATCGATATGCCTTGATGCA............................2111.00101000000000
.............................TGGGACCCAGGAATTGCATA......................................................................................................................................................................................................................................................2011.00100000010000
......................................................................................................................................................................................................................................................................ATGCAGGTCAAGGGTATGCTATACAAT......2711.00100000010000
......................................................................................................................................................................................................................................................AAATCGATATGCCTTGATGCAGGTCAAG.....................2811.00101000000000
..........ACCTACTTGCCCTTTGGCGT.........................................................................................................................................................................................................................................................................2011.00101000000000
......CTACACCTACTTGCCCTTTGGCGT.........................................................................................................................................................................................................................................................................2411.00100000010000
.....................................................................................................................................................................................................................................................................GATGCAGGTCAAGGGTATGC..............2011.00100000010000
....................CCTTTGGCGTGGGACCCAGGAATT...........................................................................................................................................................................................................................................................2411.00101000000000
...............................GGACCCAGGAATTGCATA......................................................................................................................................................................................................................................................1811.00100000100000
..............................................ATAGGTGAGTTAG--CCAACGGGT.................................................................................................................................................................................................................................2211.00100000010000
................................GACCCAGGAATTGCATAGGAA..................................................................................................................................................................................................................................................2120.50100000010000
droEug1
GGTGCCGTACACCTATTTACCATTCGGCGTAGGACCCCGAAACTGCATTGGTAAGTTAA--GACATG--TTCCCAA---------------------------------------------------------------TCGGAATTTAC--AAAA-TG--------------------------AAA----------------------AC-CGTACTATGTATATGTAAATTC----TTCCAGGAAATCGATATGCATTGATGCAGGTCAAGGGAATGCTGTACAACCTGCTGSizeHit CountTotal NormTotal
No Reads
droBia1
GGTGCCCTACAGCTATTTGCCTTTCGGCGTGGGACCTCGGAACTGCATAGGTGAGTTTT-------------------GGGGGAATATTTCTTT---------------G-AGATTTCTTTTGATGCT-----T-----T------GG--TTATC-TATTTGC-TATTA--C-----------------------------------------AATG-----TATTC--AAATAT----TTGCAGGGAATCGGTATGCTTTGATGCAGGTCAAGGGCTTCCTCTTCAACCTGCTGSizeHit CountTotal NormTotal
No Reads
droTak1
GGTGCCCTACACCTATTTGCCTTTTGGAGTGGGACCTCGCAGCTGTATTGGTAAGCAAA--TACTTG-------AT---GCTTTAAG----------------------------------T-----------------------TTCGG--TCCCC-ACTTCTTAT---TTA-------------AA----------------------TCA-ATACTA--TTTTA--TCCAAA----CCTTAGGAAATCGCTATGCCTTGATGCAGGTCAAGGGCATACTATACAACCTACTGSizeHit CountTotal NormTotal
No Reads
droEle1
GGTGCCATACACCTATTTGCCTTTCGGGGTGGGACCTCGAAACTGTATAGGTGAGTTGA-ACCTTC-T---AAGACATGGGCTAAAATTGTTTTTAAAGGGGTATCTTGGTACACCTCTTTGCACAATTTGAGCT----GGGT----ACG--ACCA-TGAA---------------AAACCAACTATATCTGAATTATATTTACTACAT--------------------CCACTT----CCTCAGGAAATCGCTATGCTTTGATGCAAGTCAAGGGCATGCTGTACAATCTGCTGSizeHit CountTotal NormTotal
No Reads
droRho1
CTTGCCATTTACCTATATACCCTTTGGTGCTGGACCTCGAAGCTGCATAGGTAAGGAAA--TCTCATAAATAT-----------------------------------------------------CC-----C-----T------AG--AAAAT-AAATAAT-TAATA--A-----------------------------------------TAAA-----TATTA--ATCAAT----CCACAGCCAGCCGATTTGCCCAGATGCAGGTGAAGGGCATGTTGTACCACCTGCTGSizeHit CountTotal NormTotal
No Reads
droFic1
TGTGCCATTTACTTATATGCCATTTGGAGCTGGACCCCGAAGTTGTATTGGTGAGGAGA--TCTACTGA-----------------------------------------------------ATTTAG-----T-----------TGTTG--AACC-TATAAA-TAATA--TA-------------AT----------------------A-----------CAATGATTATCCT----CTACAGCCAATAGATTTGCCCAGATGCAGGCGAAGGGATTGTTGTTCCACCTTCTTSizeHit CountTotal NormTotal
No Reads
droKik1
TGTGCCATATACTTATATACCCTTTGGCGCGGGTCCCCGCAGCTGCATAGGTAAGCCAA--CTTCTGT----------GAAGGAAT-------------------------------------------------------------CAG--ATCCC-ACATTTTAC-CTTA----T---CAGCTTAT----------------------CA-AACGAAA----------TTTTA----TTTCAGCCAATCGATTTGCTCACATGCAGGCCAAGGGAATGCTATATCACCTGCTGSizeHit CountTotal NormTotal
No Reads
droAna3
GGTTCCCTACACCTATTTGCCATTTGGCGTTGGTCCTCGTAACTGCATTGGTGAGTTAA--TATACATA-----------------------------------------------------TTTTAT-----A-------------------------------TA---TTTTAGATCC-------------------------------AA-ATTCTA--CCCTCTTTTCCCT----TGTTAGGCAATCGCTATGCCCTGATGCAGGTCAAGGGAATGCTGTATAACCTGATTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................GTTGGTCCTCGTAACTGCATT......................................................................................................................................................................................................................................................2114.004220000
....................CATTTGGCGTTGGTCCTCGTAACTGC.........................................................................................................................................................................................................................................................2614.004110020
............................GTTGGTCCTCGTAACTGCATTGGC...................................................................................................................................................................................................................................................2414.004030001
............................GTTGGTCCTCGTAACTGCATTG.....................................................................................................................................................................................................................................................2212.002101000
........................................................................................................................................................................................................................................................ATCGCTATGCCCTGATGCA............................1922.004301000
.....................ATTTGGCGTTGGTCCTCGTAACTGC.........................................................................................................................................................................................................................................................2512.002000011
............................GTTGGTCCTCGTAACTGC.........................................................................................................................................................................................................................................................1812.002020000
....................CATTTGGCGTTGGTCCTCGTAACT...........................................................................................................................................................................................................................................................2412.002110000
...........................CGTTGGTCCTCGTAACTGCATT......................................................................................................................................................................................................................................................2212.002110000
........................................................................................................................................................................................................................................................................GCAGGTCAAGGGAATGCTGT...........2021.503010020
.............................TTGGTCCTCGTAACTGCATTGGC...................................................................................................................................................................................................................................................2311.001100000
.....................................................................................................................................................................................................................................................................GATGCAGGTCAAGGGAAT................1821.002100001
.....................................................................................................................................................................................................................................................................GATGCAGGTCAAGGGAATGCT.............2121.002000020
.....................................................................................................................................................................................................................................................................GATGCAGGTCAAGGGAATGCTGTA..........2421.002000020
.....................................................................................................................................................................................................................................................................................ATGCTGTATAACCTGATT1811.001010000
....................CATTTGGCGTTGGTCCTCGTAAC............................................................................................................................................................................................................................................................2311.001010000
...........................CGTTGGTCCTCGTAACTGC.........................................................................................................................................................................................................................................................1911.001010000
...............................GGTCCTCGTAACTGCATTG.....................................................................................................................................................................................................................................................1911.001100000
......................TTTGGCGTTGGTCCTCGTAACTGCATTG.....................................................................................................................................................................................................................................................2811.001100000
............................GTTGGTCCTCGTAACTGCAT.......................................................................................................................................................................................................................................................2011.001000010
....................................................................................................................................................................................................................................................................................AATGCTGTATAACCTGATT1911.001010000
....................CATTTGGCGTTGGTCCTC.................................................................................................................................................................................................................................................................1821.002110000
.......................TTGGCGTTGGTCCTCGTAAC............................................................................................................................................................................................................................................................2011.001010000
............................GTTGGTCCTCGTAACTGCATTGG....................................................................................................................................................................................................................................................2311.001000010
..........................GCGTTGGTCCTCGTAACTGC.........................................................................................................................................................................................................................................................2011.001100000
..............................TGGTCCTCGTAACTGCATTGGC...................................................................................................................................................................................................................................................2211.001010000
.....................................................................................................................................................................................................................................................................GATGCAGGTCAAGGGAATGCTGTATAC.......2711.001100000
............................GTTGGTCCTCGTAACTGCA........................................................................................................................................................................................................................................................1911.001010000
........................................................................................................................................................................................................................................................ATCGCTATGCCCTGATGCAGGTCAAGG....................2721.002000002
....................CATTTGGCGTTGGTCCTCGTAACTGCATT......................................................................................................................................................................................................................................................2911.001010000
............CTATTTGCCATTTGGCGTTGGTCCTC.................................................................................................................................................................................................................................................................2621.002020000
..............ATTTGCCATTTGGCGTTGGTCCTC.................................................................................................................................................................................................................................................................2421.002020000
.......................................................................................................................................................................................................................................................................TGCAGGTCAAGGGAATGCTGTATAACCT....2811.001010000
...................................................................................................................................................................................................................................................................CTGATGCAGGTCAAGGGA..................1821.002110000
.......................................................................................................................................................................................................................................................AATCGCTATGCCCTGATGCA............................2021.002020000
...................................................................................................................................................................................................................................................................CTGATGCAGGTCAAGGGAATGCTGTAT.........2711.001100000
.....................................................................................................................................................................................................................................................................GATGCAGGTCAAGGGAATGCTGTAT.........2511.001001000
.......................TTGGCGTTGGTCCTCGTAACTGC.........................................................................................................................................................................................................................................................2311.001100000
...................................................................................................................................................................................................................................................................................GAATGCTGTATAACCTGATT2011.001010000
..................................................................................................................................................................................................................................................................................GGAATGCTGTATAACCTG...1811.001100000
....................CATTTGGCGTTGGTCCTCGTA..............................................................................................................................................................................................................................................................2111.001010000
................................................................................................................................................................................................................................................................................AGGGAATGCTGTATAACCTGATT2311.001100000
.......................................................................................................................................................................................................................................................AATCGCTATGCCCTGATGC.............................1921.002020000
.......................................................................................................................................................................................................................................................AATCGCTATGCCCTGATGCAGGT.........................2320.501000010
..........................................................................................................................................................................................................................................................................AGGTCAAGGGAATGCTGTA..........1920.501000010
..........................................................................................................................................................................................................................................................CGCTATGCCCTGATGCAGGT.........................2020.501100000
......................................................................................................................................................................................................................................................................ATGCAGGTCAAGGGAATGC..............1920.501000010
........................................................................................................................................................................................................................................................................GCAGGTCAAGGGAATGCTGTA..........2120.501000010
............................................................................................................................................................................................................................................................CTATGCCCTGATGCAGGTC........................1920.501010000
..................................................................................................................................................................................................................................................................CCTGATGCAGGTCAAGGG...................1820.501000100
................................................................................................................................................................................................................................................................GCCCTGATGCAGGTCAAGGGAATG...............2420.501000010
.......................................................................................................................................................................................................................................................AATCGCTATGCCCTGATGCAG...........................2120.501100000
....................................................................................................................................................................................................................................................GGCAATCGCTATGCCCTGATGCAGGTC........................2720.501010000
............CTATTTGCCATTTGGCGTTGGTCCT..................................................................................................................................................................................................................................................................2520.501010000
...............TTTGCCATTTGGCGTTGGTCCTC.................................................................................................................................................................................................................................................................2320.501010000
..................................................................................................................................................................................................................................................................CCTGATGCAGGTCAAGGGAATGC..............2320.501010000
......................................................................................................................................................................................................................................................CAATCGCTATGCCCTGATGC.............................2020.501010000
...............................................................................................................................................................................................................................................................TGCCCTGATGCAGGTCAAGGGAATGCT.............2720.501010000
........................................................................................................................................................................................................................................................ATCGCTATGCCCTGATGC.............................1820.501010000
...........CCTATTTGCCATTTGGCGTTGG......................................................................................................................................................................................................................................................................2220.501100000
......CTACACCTATTTGCCATTTGGC...........................................................................................................................................................................................................................................................................2220.501010000
......................................................................................................................................................................................................................................................................ATGCAGGTCAAGGGAATGCTGTA..........2320.501010000
.....................................................................................................................................................................................................................................................................GATGCAGGTCAAGGGAATGCG.............2120.501000010
.....................................................................................................................................................................................................................................................................GATGCAGGTCAAGGGAATG...............1920.501000010
......................................................................................................................................................................................................................................................................ATGCAGGTCAAGGGAATGCT.............2020.501010000
...............................................................................................................................................................................................................................................................TGCCCTGATGCAGGTCAAGGGAATGCTGT...........2920.501000010
...............................GGTCCTCGTAACTGCATTGGC...................................................................................................................................................................................................................................................2120.501001000
......CTACACCTATTTGCCATTTGGCGTTG.......................................................................................................................................................................................................................................................................2620.501000010
...................................................................................................................................................................................................................................................................CTGATGCAGGTCAAGGGAATGCT.............2320.501000010
...........................................................................................................................................................................................................................................................GCTATGCCCTGATGCAGGTCAAGGGA..................2620.501000010
................................................................................................................................................................................................................................................................GCCCTGATGCAGGTCAAGGGAATGCTGT...........2820.501000010
..............................................................................................................................................................................................................................................................ATGCCCTGATGCAGGTCAAGG....................2120.501100000
...........................................................................................................................................................................................................................................................GCTATGCCCTGATGCAGGTCAAGGG...................2520.501100000
.............................................................................................................................................................................................................................................................TATGCCCTGATGCAGGTCAAGGG...................2320.501010000
......................................................................................................................................................................................................................................................CAATCGCTATGCCCTGATGCAGGTC........................2520.501010000
........................................................................................................................................................................................................................................................ATCGCTATGCCCTGATGCAGGTCAAGGG...................2820.501010000
.................TGCCATTTGGCGTTGGTCCTC.................................................................................................................................................................................................................................................................2120.501010000
...TCCCTACACCTATTTGCCATTTGGC...........................................................................................................................................................................................................................................................................2520.501010000
...........................................................................................................................................................................................................................................................................GGTCAAGGGAATGCTGTA..........1820.501000001
.......................................................................................................................................................................................................................................................AATCGCTATGCCCTGATGCAGGTCAAGG....................2820.501001000
..................................................................................................................................................................................................................................................................CCTGATGCAGGTCAAGGGAATGCTGT...........2620.501000010
.........................................................................................................................................................................................................................................................TCGCTATGCCCTGATGCAGGTCAAGG....................2620.501100000
................................................................................................................................................................................................................................................................GCCCTGATGCAGGTCAAGG....................1920.501010000
.................................................................................................................................................................................................................................................................CCCTGATGCAGGTCAAGGGAATGC..............2420.501000010
..........................................................................................................................................................................................................................................................CGCTATGCCCTGATGCAGGTCAAGGG...................2620.501100000
..........................................................................................................................................................................................................................................................................AGGTCAAGGGAATGCTGC...........1820.501010000
droBip1
AGTTCCCTACACTTATTTGCCGTTCGGAGTGGGTCCCCGTAACTGCATTGGTGAGTTAA--TCTTTCTGTCT------------------------------------------------------AT-----CTAGACAAGA---------------------------------TCGGCTCTCTAT----------------------AC-CA-------------TTACTCT----TCGTAGGAAATCGCTATGCCCTGATGCAGGTCAAGGGAATGCTGTACAACCTGATTSizeHit CountTotal NormTotal
No Reads
dp5
AGTGCCTTACACATATTTGCCGTTTGGAGTAGGTCCCCGAAACTGCATAGGTGAGTCTG--CTTCTCC----------GAAGGAAAT----------------------------------ATTTTGT------------------------------------TAG---TTT-------------AA----------------------CCA-TTACCA--TTATCATTTCTAT----CCCCAGGCAATCGATATGCTCTGATGCAGGTCAAGGGAATGTTGTACAACCTCCTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................GTTTGGAGTAGGTCCCCGAA..............................................................................................................................................................................................................................................................2011.0010100000000
........................................................................................................................................................................................................................................................ATCGATATGCTCTGATGCAGGTCAAG.....................2611.0010100000000
...........................AGTAGGTCCCCGAAACTGCATAGGC...................................................................................................................................................................................................................................................2511.0010100000000
............ATATTTGCCGTTTGGAGTAGGT.....................................................................................................................................................................................................................................................................2211.0010100000000
droPer2
AGTGCCTTACACATATTTGCCGTTTGGAGTAGGTCCCCGAAACTGCATAGGTGAGTCTG--CTTCTCC----------GAAGGAAAT----------------------------------ATTTTGT------------------------------------TAG---TTT-------------AA----------------------CCA-TTACCA--TTATCATTTCTAT----CCCCAGGCAATCGATATGCTCTGATGCAGGTCAAGGGAATGTTGTACAACCTCCTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................TCTGATGCAGGTCAAGGGA..................1913.003300000
.....................GTTTGGAGTAGGTCCCCGA...............................................................................................................................................................................................................................................................1912.002000002
............................................................................................................................................................................................................................................................ATATGCTCTGATGCAGGTCAAGGG...................2411.001100000
................................................................................................................................................................................................................................................................GCTCTGATGCAGGTCAAG.....................1811.001100000
........................................................................................................................................................................................................................................................ATCGATATGCTCTGATGCAGGTC........................2311.001010000
....................CGTTTGGAGTAGGTCCCC.................................................................................................................................................................................................................................................................1811.001100000
.......................TTGGAGTAGGTCCCCGAAACTGC.........................................................................................................................................................................................................................................................2311.001010000
..............................................................................................................................................................................................................................................................ATGCTCTGATGCAGGTCAAGGG...................2211.001001000
.......................................................................................................................................................................................................................................................AATCGATATGCTCTGATGCA............................2011.001010000
.....................GTTTGGAGTAGGTCCCCGAAACTGC.........................................................................................................................................................................................................................................................2511.001000001
........ACACATATTTGCCGTTTGGA...........................................................................................................................................................................................................................................................................2011.001001000
.......................................................................................................................................................................................................................................................AATCGATATGCTCTGATGCAGGT.........................2311.001010000
..............................................................................................................................................................................................................................................................ATGCTCTGATGCAGGTCAAGGGAAT................2511.001000001
droWil2
GGTGCCATATACGTATCTGCCTTTTGGTGTGGGACCACGCAATTGCATTGGTAAGTCAG--CCTCA-TCTTATCTC---------------------------------------------------------------TTGG---------------------------------AAACCGATTTTA----------------------AT-TGA--------------CTTAT----TTTCAGGCAATCGATATGCTCTAATGCAGGCCAAGGCCATGCTCTATAATCTTGTASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............GTATCTGCCTTTTGGTGTGGGACC...................................................................................................................................................................................................................................................................2412.00220000
.......................TTGGTGTGGGACCACGCAATTGCATT......................................................................................................................................................................................................................................................2612.00200110
.....................TTTTGGTGTGGGACCACGCAATTGCATT......................................................................................................................................................................................................................................................2811.00101000
........ATACGTATCTGCCTTTTGGTGTGG.......................................................................................................................................................................................................................................................................2411.00100100
.......................TTGGTGTGGGACCACGCAATTGC.........................................................................................................................................................................................................................................................2311.00100100
.....CATATACGTATCTGCCTTTTGGTGT.........................................................................................................................................................................................................................................................................2511.00100100
.............................................................................................................................................................................................................................................................TATGCTCTAATGCAGGCCAAGGCCATG...............2711.00101000
........................TGGTGTGGGACCACGCAATTGCATT......................................................................................................................................................................................................................................................2511.00101000
........ATACGTATCTGCCTTTTGGTGTGGG......................................................................................................................................................................................................................................................................2511.00100100
......ATATACGTATCTGCCTTTTGGTGTGG.......................................................................................................................................................................................................................................................................2611.00101000
...........................................................................................................................................................................................................................................................................GGCCAAGGCCATGCTCTATAATCTT...2511.00101000
..................GCCTTTTGGTGTGGGACCACG................................................................................................................................................................................................................................................................2111.00100001
....................CTTTTGGTGTGGGACCACGCAATTGC.........................................................................................................................................................................................................................................................2611.00100100
......................TTTGGTGTGGGACCACGCAATTGCATT......................................................................................................................................................................................................................................................2711.00100100
..........ACGTATCTGCCTTTTGGTGTGGGAC....................................................................................................................................................................................................................................................................2511.00110000
........................................................................................................................................................................................................................................................ATCGATATGCTCTAATGCAGGCCAA......................2511.00100010
........ATACGTATCTGCCTTTTGGTGT.........................................................................................................................................................................................................................................................................2211.00100010
.........................................................................................................................................................................................................................................................................CAGGCCAAGGCCATGCTCTATG........2220.50101000
droVir3
CGTGCCCTACACGTATCTGCCCTTCGGCGCAGGTCCTCGCAATTGCATAGGTGAGTGCGAACCTTT-T-------------------------------------------------------CTTGT------------------------------------TTA---TTT-------------AT---GTGTAGTATTTA------TT----------------ATTTTTGATTCCACGCAGGCAATCGTTATGCTCTGATGCAGGCCAAGGCCATGTTATACAACCTGGTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................................................................GATGCAGGCCAAGGCCATGT..............2011.001001000000000000000000000000000000000000000000000000000000000000
....CCCTACACGTATCTGCCCTT...............................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................TATGCTCTGATGCAGGCCAAGGCCATGTT.............2911.001000000000000000100000000000000000000000000000000000000000000000
...............TCTGCCCTTCGGCGCAGGTC....................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................AGGCCAAGGCCATGTTATACAACCTG...2611.001001000000000000000000000000000000000000000000000000000000000000
..........ACGTATCTGCCCTTCGGCGCAGGTCCT..................................................................................................................................................................................................................................................................2711.001000000000000000100000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................AGGCAATCGTTATGCTCTGATGCAG...........................2511.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................ATGTTATACAACCTGGTG1811.001001000000000000000000000000000000000000000000000000000000000000
............................GCAGGTCCTCGCAATTGCAT.......................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
....................CCTTCGGCGCAGGTCCTCGCA..............................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................GGCAATCGTTATGCTCTGAC...............................2011.001000100000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................CTCTGATGCAGGCCAAGGCCATGTT.............2511.001000000000000000000000000000000000000000000000000000000000001000
..................GCCCTTCGGCGCAGGTCCTC.................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................CGTTATGCTCTGATGCAGGCCAA......................2311.001000000000000000100000000000000000000000000000000000000000000000
..............ATCTGCCCTTCGGCGCAGGTC....................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................CTTCGGCGCAGGTCCTCGCAATTGCAT.......................................................................................................................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................AATCGTTATGCTCTGATGCAG...........................2111.001001000000000000000000000000000000000000000000000000000000000000
...........CGTATCTGCCCTTCGGCGCAGGTCCTCG................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................GTTATGCTCTGATGCAGGCCAAGGCCAC................2811.001000100000000000000000000000000000000000000000000000000000000000
droMoj3
TCTGCCATTTACGTATTATCCTTTCGGCGTAGGGCCACGCAATTGCATAGGTGAGTGGC--AGGCTCT-----GAT---ATCTAAGG----------------------------------TATTTGT------------------------------------TAA---TAT-------------TT----------ATTTA------TT----------------AATTATGATTT-CTCTAGGCTCCCGATTCGCATTACTTGAGGCCAAAGCTGTGATCTACTATCTGCTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............ATTATCCTTTCGGCGTAGGGC....................................................................................................................................................................................................................................................................21127.002715000012
............GTATTATCCTTTCGGCGTAGGGC....................................................................................................................................................................................................................................................................23117.00172000015
................TATCCTTTCGGCGTAGGGC....................................................................................................................................................................................................................................................................1915.005101102
..............ATTATCCTTTCGGCGTAGGGCCAC.................................................................................................................................................................................................................................................................2414.004300001
........TTACGTATTATCCTTTCGGCGTAGGGC....................................................................................................................................................................................................................................................................2714.004200002
...............TTATCCTTTCGGCGTAGGGC....................................................................................................................................................................................................................................................................2013.003200001
.................ATCCTTTCGGCGTAGGGCCAC.................................................................................................................................................................................................................................................................2112.002200000
...............................................................................................................................................................................................................................................................CGCATTACTTGAGGCCAAAGCTGTGAT.............2712.002200000
.................ATCCTTTCGGCGTAGGGCC...................................................................................................................................................................................................................................................................1911.001100000
.................ATCCTTTCGGCGTAGGGC....................................................................................................................................................................................................................................................................1811.001000001
..................................................................................................................................................................................................................................................................ATTACTTGAGGCCAAAGCT..................1911.001100000
...........................................................................................................................................................................................................................................................................GGCCAAAGCTGTGATCTACT........2011.001100000
........TTACGTATTATCCTTTCGGC...........................................................................................................................................................................................................................................................................2011.001100000
......ATTTACGTATTATCCTTTCGGCG..........................................................................................................................................................................................................................................................................2311.001100000
......................TTCGGCGTAGGGCCACGCAATTGC.........................................................................................................................................................................................................................................................2411.001100000
.......TTTACGTATTATCCTTTCGGCGTAGGGC....................................................................................................................................................................................................................................................................2811.001100000
.........TACGTATTATCCTTTCGGCGTAGGGC....................................................................................................................................................................................................................................................................2611.001000001
...................................................................................................................................................................................................................................................................................CTGTGATCTACTATCTGCTG2011.001000001
......................................................................................................................................................................................................................................................................CTTGAGGCCAAAGCTGTGATCTACT........2511.001100000
..................................................................................................................................................................................................................................................................ATTACTTGAGGCCAAAGCTGT................2111.001000001
...............................................................................................................................................................................................................................................................CGCATTACTTGAGGCCAAAGC...................2111.001100000
...........................................................................................................................................................................................................................................................GATTCGCATTACTTGAGGC.........................1911.001100000
............................................................................................................................................................................................................................................................ATTCGCATTACTTGAGGCCAAAGCTGTG...............2811.001100000
............................................................................................................................................................................................................................................................ATTCGCATTACTTGAGGCCA.......................2011.001100000
..............................................................................................................................................................................................................................................................................CAAAGCTGTGATCTACTATCTG...2211.001100000
......................................................................................................................................................................................................................................................................CTTGAGGCCAAAGCTGTGAT.............2011.001100000
............GTATTATCCTTTCGGCGT.........................................................................................................................................................................................................................................................................1811.001100000
..............ATTATCCTTTCGGCGTAGGG.....................................................................................................................................................................................................................................................................2011.001100000
........................................................................................................................................................................................................................................................................TGAGGCCAAAGCTGTGATCTACTATCT....2711.001100000
..............ATTATCCTTTCGGCGTAGGGCC...................................................................................................................................................................................................................................................................2211.001100000
.....CATTTACGTATTATCCTTTC..............................................................................................................................................................................................................................................................................2011.001100000
.....................................................................................................................................................................................................................................................................ACTTGAGGCCAAAGCTGTGATC............2211.001000001
......ATTTACGTATTATCCTTTCGGCGTAG.......................................................................................................................................................................................................................................................................2611.001100000
...............................................................................................................................................................................................................................................................CGCATTACTTGAGGCCAAAGCTGTG...............2511.001100000
...........................................TGCATAGGTGAGTGGC--AGGCTCT-----..............................................................................................................................................................................................................................2311.001000001
............GTATTATCCTTTCGGCGTAGGGCCAC.................................................................................................................................................................................................................................................................2611.001100000
...........................................................................................................................................................................................................................................................................GGCCAAAGCTGTGATCTACTATCTG...2511.001100000
....................................................................................................................................................................................................................................................................TACTTGAGGCCAAAGCTGTGATCTACT........2711.001000001
...........................................................................................................................................................................................................................................................GATTCGCATTACTTGAGGCCA.......................2111.001100000
droGri2
GGTACCCTACTCCTATTTGCCCTTCGGCGTAGGACCACGTAGCTGTATAGGTATGTTCT-AGCTCCAA----------AAAGATAAC----------------------------------ACTCGAA------------------------------------TAA---TAT-------------G--------------CATGTCTGTT----------------ACTTTTGA----TTGCAGGAAATCGTTATGCTCTGATGCAGGCCAAGGCTATGTTGTACAATCTAGTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 07:49 PM