ID:

dsi_5090

 Coordinate:

3r:1121847-1121996 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.1 -15.4 -15.1

Flybase annnotation

three_prime_UTR [3r_1121259_1122294_+]; exon [3r_1121085_1122294_+]

No Repeatable elements found

Sense Strand Reads

##########################################################################################################################################################################################################################################################
TATAGCGAACAGTAACCAAGATCTTCTTGGCCACTTGTCTATTGAAAACTGTAAGTGTGTACATTTTGATAAAAACCAACATAGAAGGCCTCTATTAACTAATTGTAAGCAAGTGCTCGAGCATTTGCCCGATGTATATGTAATGTAAAAATAAACGAGAAACGTAGTATTTGGCCGCAATAGAAAGCATGCAACAAACCATTTTTGATACTGTACAAAATGCCAAGCACAAAACTATGAGAATGCGAAT
***************************************************************************************************.....((...((((((((((.((((.(((.....))).)))).....................)).))))))))...))************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 M053
female body
 SRR553488
RT_0-2 hours eggs
 M025
embryo
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR902009
testis
 M024
male body		 SRR902008
ovaries
 GSM343915
embryo
.......................................TATTGAAAACTGTAAGCGTGTACA........................................................................................................................................................................................... 24 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................TAAACGAGAAACGTAGTATTTGGCCGC........................................................................ 27 0 1 2.00 2 0 0 1 0 0 0 0 0 0 1 0
...................................................................................................TAATTGTAAGCAAGTGCTCGAGCATT............................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.................................................................TTGATAAAAACCAACATAGAAGGCC................................................................................................................................................................ 25 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0
.......................................................................................................................................................TAAACGAGAAACGTAGTATTTGGCCGCAAT..................................................................... 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................AATAAACGAGAAACGTAGTATTTGGCC.......................................................................... 27 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
..........................................................................................TCTATTAAATAATTGTAAGCAAGTGC...................................................................................................................................... 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
............................GGCCACTTGTCTATTGAAAACT........................................................................................................................................................................................................ 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
........................................................................................................................................................AAACGAGAAACGTAGTATTTGGCCG......................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0
............................................AAAACTGTAAGTGTGTA............................................................................................................................................................................................. 17 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................CTAATTGTAAGCAAGTGCTCGAGCA............................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................TATTTGGCCGCAATAGAAAGCATGC.......................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..........................................................................................TCTATTAACTAATTGTAAGCAAGTGC...................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................TTTGCCCGATGCATATGTAATGTAAA..................................................................................................... 26 1 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
...............................................................................................TAACTAATTGTAAGCAAGTGCTCGAGCATT............................................................................................................................. 30 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................GATACTGTACAAAAT............................. 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................AACGAGAAACGTAGTATTTGGCCGCAA...................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
.........................................TTGAAAACTGTAAGTGTGTACATTT........................................................................................................................................................................................ 25 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................................................................................AACCATTTTTGATACTGTA................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0
................................................................................................................................................................AACGTAGTATTTGGCCGCATT..................................................................... 21 1 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0
..........................................TGAAAACTGTAAGCGTGTACATTT........................................................................................................................................................................................ 24 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................AATAAACGAGAAATGTAGTATTTGGC........................................................................... 26 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0
.................................................................................................................................................TAAAAATAAACGAGAAATGTAGTATTT.............................................................................. 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................AGAAGGATTCTATTAACTGAT................................................................................................................................................... 21 3 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................CAAGTGCCCGAACATGTGCCC........................................................................................................................ 21 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0
.......................................................TGTGTAGATTTTGAAAAAAA............................................................................................................................................................................... 20 2 6 0.17 1 0 0 0 0 0 0 0 1 0 0 0
....................................................................................................................................................................................................................................ACAGAACTATGAGAATTCGGA. 21 3 7 0.14 1 0 0 0 0 0 0 1 0 0 0 0
..............................................AACTCTAAGTGTCTACA........................................................................................................................................................................................... 17 2 8 0.13 1 0 0 0 0 0 1 0 0 0 0 0
...............................TACTTGTCTATTGAA............................................................................................................................................................................................................ 15 1 12 0.08 1 0 1 0 0 0 0 0 0 0 0 0
..................................................................................................................................GGTGTATATGTAAGATAAAAA................................................................................................... 21 3 12 0.08 1 0 0 0 0 0 0 0 0 0 0 1
....................................................................................................................................................................................................................................ACAGTACTATGAGAATTCG... 19 3 13 0.08 1 0 0 0 0 0 0 1 0 0 0 0
...............................................ACTTAAAGTGTGTACATT......................................................................................................................................................................................... 18 2 18 0.06 1 0 0 0 0 0 1 0 0 0 0 0
.....................................................................TAACAACCAACTTAGAA.................................................................................................................................................................... 17 2 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

ATATCGCTTGTCATTGGTTCTAGAAGAACCGGTGAACAGATAACTTTTGACATTCACACATGTAAAACTATTTTTGGTTGTATCTTCCGGAGATAATTGATTAACATTCGTTCACGAGCTCGTAAACGGGCTACATATACATTACATTTTTATTTGCTCTTTGCATCATAAACCGGCGTTATCTTTCGTACGTTGTTTGGTAAAAACTATGACATGTTTTACGGTTCGTGTTTTGATACTCTTACGCTTA
************************************************************************.....((...((((((((((.((((.(((.....))).)))).....................)).))))))))...))*************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M053
female body
 GSM343915
embryo
 M024
male body
.......................................................................................................................TCGTAAACGGGCTATAGAGA............................................................................................................... 20 3 9 0.11 1 1 0 0 0
...............................................................................................ATTGATTAACATCCGTGTAC....................................................................................................................................... 20 3 13 0.08 1 0 1 0 0
.......................................................................................................................TCGTAAACGGGAAACCTATA............................................................................................................... 20 3 17 0.06 1 0 0 1 0
..............TGGTTCTAGTAGAAC............................................................................................................................................................................................................................. 15 1 18 0.06 1 1 0 0 0
................................................................................................TTGATTAACATCCGTGTAC....................................................................................................................................... 19 3 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:1121797-1122046 + dsi_5090 TATA----GC-GAACAGTAACC----A-AGATCTTC-TT-G-GCCACTTGTCTATTGAAA-A-CT----GTA-AG--------TGTGTACATTTTG-ATA---AA-AACCAAC----------ATA------------------------------------------------------------------------G-AAGGCC--TCTATTAACTAATTGTAAGCAAGTGCTC-GAGCATTTGCCCGATGT--ATATGTAATGT-------AAAAATAAACG-----------------------AGAAACGTAGTATTT-GGCCGCAA--TAGAAAGCATGCAACAA---------------------------------------------ACC--ATTTTTGATACTGTACAA------------------------------AATGCCAAGCACAAAA-----CTATGAGAATG------CGAAT
droSec2 scaffold_6:1339786-1340019 + TATA----GC-GAACAGTAACC----A-AGACCTTC-TT-G-GCCACTTGTCTATTGAAA-A-CT----G-------------TGTGTACATTTTG-ATA---AAAAACCAAC----------ATA------------------------------------------------------------------------G-AAGGCC--TCTATTAACTAATTGTAAGCAAGTGCTT-GAGCATTTGCCCGATGT--ATATGTAATGT-------AAAAATAAACG-----------------------AGAAACGTAGTATTT-GGCCGCAA--TAGAAAGCATGCAACAA---------------------------------------------ACC--ATTTTTGATACTGTACAA------------------------------AATGCCAAGCACAAAA-----CTA-------------------
dm3 chr3R:1222429-1222673 + TATA----GC-AAATAGTAACC----G-AGATCT----T-G-GCCACTTGTC--TTGAAA-A-CT----GTA-AG--------TGTGTACATTTTC-ATA---AA-AACCAAC----------ATA------------------------------------------------------------------------G-AAGGCC--TCTATTAACTAATTGTAAGCAAGTGTTA-GATCATTTGCCCGATGT--ATATGTAATGT-------AAAAATAAACG-----------------------AGAAACGTAGTATTT-GGCCGCAA--TGGAAAGCATGCAACAA---------------------------------------------ACC--ATTTTTGATACTGTACAA------------------------------AATGCCAAGCACAAAA-----CTATGAGAATG------CGAAT
droEre2 scaffold_4770:1491168-1491410 + CATA----GA-GAACAGTAACT----A-AGATCT----T-G-GCCACTTGTCTATTGAAA-A-CT----GAA-AA--------TGTGTACAATTTT-ATA---AA--ACCAAC----------ATA------------------------------------------------------------------------G-AAGGCC--TCTATTAACTAATTGTAAGCAAGTGTTT-GAGCATTTGCCCGATGT--ATATGTAATGT-------AAAAATAAACG-----------------------AGAAATGTAGTATTT-GGCCGCAA--TAGAAAGCATGCAACAA---------------------------------------------ACA--TTTTTTGATACTGTACAA------------------------------AATGCCAAGCGCAACA-----CTATGAGAATG---------AT
droYak3 3R:1614308-1614549 + TATA----GA-GAACAGTAACT----A-TGATCT----T-G-GCCACTTGTCTATTGAAA-A-CT----AAA-AA--------TGTGTACAATTTT-ATA---AA-AACCAAC----------ATA------------------------------------------------------------------------G-AAGGCC--TCTATTAACTAATTGTAAGCAAGTGTTT-GAGCATTTGCCCGATGT--ATATGTAATGT-------AAAAATAAACG-----------------------AGAATTGTAGTATTT-GGCCGCAA--TAGAAAGCATGCAACAA---------------------------------------------AGC--ATTTTTGATACTGTACAA------------------------------AATGCCAAGCACAACA-----CT--GAGAATG---------AT
droEug1 scf7180000409766:165271-165517 + TATT----GA-GTATAGTAACC----G-AGATCTTC-TC-G-GGCATTCGTCTACTGAAATA-CT----GAAAAA--------TATGTACATTTTT-ATA---AA-AACCAAC----------ATG------------------------------------------------------------------------A-AGGGCC--TCTATTAACTAATTGTAAGCAAGTGTTA-GAGCATTTGCCTAATGT--ATATGTAATGT-------AAAAATAAACA-----------------------AGAACTGTAGTATTT-GGCCGCAA--TAGAAAGCATGCAACAA---------------------------------------------ACC--ATTTTTGATACTGTACAA------------------------------AATGCCAAGCACAACA-----TTTTGAGAATG-----------
droBia1 scf7180000302411:985949-986199 + TATTAACCGA-G-ATTGTAACC----G-AGATTTTC-TC-G-GACACTCGTCTACAGAAAAA-CT----GAAGAA--------TGTGTAAATTTTT-ATA---TA-AACCAAA----------ATG------------------------------------------------------------------------A-AGGGCC--TCTATTAACTAATTGTAAGCAAGTGTTA-GATCATTTGCCTAGTGT--ACATGTAATGT-------AA-AATAAACA-----------------------AAAACTGTAGTATTT-GGCCGCAA--TAGAAAGCATGCAACAA---------------------------------------------ACA--ATTTTTGATACTGTACAA------------------------------AATGCCAATCACATTA-----TTATGAAAATG---------AA
droTak1 scf7180000415789:146062-146310 - TATT----GA-GCATTGTAACC----G-AAATTTTC-TC-G-GGCACTCGTCTATTGAAAAA-CT----GAAAAA--------TGTGTAAATTTTT-ATA---AA-AACCAAA----------ATG------------------------------------------------------------------------A-AAGGCC--TCTATTAACTAATTGTAAGCAAGTGCTA-GATCATTTGCCTAATGT--ACATGTAATGT-------AAAAATAAACA-----------------------AGAACTGTAGTATTT-GGCCGCAA--TAGAAAGCATGCAACAA---------------------------------------------ACA--ATTTTTGATACTGTACAA------------------------------AATGCCAATCACAATA-----TTATGAAAGTG---------AA
droEle1 scf7180000491021:249516-249757 - TGTT----AA-GTGTAGTAATC----G-AGATCTTTTTC-G-GGTACTTCTCTATTGAAA-------------AA--------TATGTACATTTTT-ATA---AA-AACCAAG----------ATG------------------------------------------------------------------------A-AAGGCC--TCTATTAACTAATTGTAAGCGAGTGCTA-GAGCATTTGCCTAATGT--ATATGTAATGT-------AAAAATAAACA-----------------------AGAACTGTAGTATTT-GGCCGTAA--TAGAAAGCATGCAACAA---------------------------------------------ACA--ATTTTTGATACTGTACAA------------------------------AATGCCAAGCACAATA-----TTATGAGAATG---------AA
droRho1 scf7180000757933:17474-17717 - TATT----GA-CTATAGTAGTT----G-AGCTCTTC-TC-G-AATACTTCTCTATTGAAA-------------AA--------TATGTAAATTTTT-ATA---AA-AATCAAT----------ATG----------AAA-----------------------------------------------------------G-ACGGCC--TCTATTAACTAATTGTAAGCAAGTGTTA-AAGCATTTGCCTAATGT--ATATGTAATGT-------AAAAATAAACA-----------------------AGAACTGTAGTATTT-GGCCGCAA--TAGAAAGCATGCAACAA---------------------------------------------GCA--ATTTTTGATACTGTACAA------------------------------AATGCCAAGCACAATA-----TTATGAACATG---------AA
droFic1 scf7180000453850:605310-605553 + CATG----GA-GTTCAGTAACC----C-AGATCTTC-CT-G-GGTGCTTCTCTATTGAAAAA-CT----GAA-AA--------AATGTACATTTTT-ATA---AA-TACCAAC----------ATG------------------------------------------------------------------------A-AGGGCC--TCTATTAACTAATTGTAAGCAAGTGTTA-GAGCATTTGCCTAATGT--AAATGTAATGT-------AAAAATAAACA-----------------------AGAACTGTAGTATTT-GGCCGCAA--TAGAAAGCATGCAACAA---------------------------------------------ACA--ATTTTTGATACTGTACA-------------------------------AATGCCAAGCACAACA--------TGAAAATG---------AA
droKik1 scf7180000302461:644183-644417 + AGCA----GA-------CAACC----G-CAATCTGC-TCGGGGAAAATCCCCGATTGAAA-ACCC-AAAAGA-AA--------TATGTACATTTTT-ATA---AA-GAGCGAA----------ATG------------------------------------------------------------------------A-AGGGCAAATCTATTAACTAATTGTAAGCAAGTGTTA-AAGCATTTGCCTAATGCTAAGATGTAATGT-------AAAAATAAACA-----------------------AGAACTGTAGTATTC-GGCCGCAA--TAGAAAGCATGTAACAA---------------------------------------------ACC--ATTTTTGATACTGTACAA------------------------------AATGCCAAGCACA------------------------------
droAna3 scaffold_13340:3966735-3967007 - TATG----CATAAGTAATAATG----A-ATATCTGC-CG-AT-GAAATGCTCGATTGAGA-A-CA----AAA-AACAAAACCCATTGTACATTTTT-ATA---AA--ATCAAA----------ATG------------------------------------------------------------------------A-AGGGCTAAACTATTAACTAATTGTAAGCAAGTGTAA-GATCATTTGCCTAATGT--ATATTTAATATATAAAACAA-----AACA-AAAACAAAAAAACAAA---GAAAAAATCGTAGTATTT-GGCCGCAA--TGGAAAGCATGTAACAAA--------------------------------------------ACA--ATTTTTGATACTGTACAA------------------------------AATGCCAAGCACAATA-----TTGTGAG---------------
droBip1 scf7180000396570:544382-544640 + TGTG----CATAGGTAATAATG----A-ATATCTGC-CG-AT-GAAATGCTCGATTGAGA-A-CA----AAA-AACAAAACCCATTGTACATTTTT-ATA---AA--ATCAAA----------ATG------------------------------------------------------------------------A-AGGGCTAAACTATTAACTAATTGTAAGCAAGTGTAA-GATCATTTGCCTAATGT--ATATTTAATAT-------A----TAAAAAAGAAACAAAAAAACAAA---GAAAAAATCGTAGTATTT-GGCCAGAA--TGGAAAGCATGTAACAAA--------------------------------------------ACA--ATTTTTGATACTGTACAA------------------------------AATGCCAAGCACAA-----------------------------
dp5 2:21376374-21376642 - GAG-----CAT-----------------------TA----CT-GAACTTCTCGATTGAACAA-CT----AGA--A--------GCTGTACATTTTT-ATATCGAA--ATCAGCAACAACAAAATTGAAGAGTAGAGCAAAC---CA----------------------------------------------------T-AAGCTA--ATTATTAACTAATTGTAAGCAAGTGTTA-GAGCATTTGCCTAATTCTAATATCTGAAGC-------AA-ATTAGCTA-----------------------AAATCTGTAGTATTTCGGCCGCAA--CAAAACCAAT----CAA---------------------------------------------ACCGATTTTTTGATACTGTACAA------------------------------AATGCCAAGCACAATAAAAGATTGTGAGAGAAAACCCGT-AAG
droPer2 scaffold_3:4160108-4160377 - GAG-----CAT-----------------------TA----CT-GAACTTCTCGATTGAACAA-CT----AGA--A--------ACTGTACATTTTT-ATATCGAA--ATCAGCAACAACAAAATTGAAGAGTAGAGCAAAC---CA----------------------------------------------------T-AAGCTA--ATTATTAACTAATTGTAAGCAAGTGTTA-GAGCATTTGCCTAATTCTAATATCTGAAGC-------AA-ATTAGCTA-----------------------AAATCTGTAGTATTTCGGCCGCAA--CAAAACCAAT----CAA---------------------------------------------ACCGATTTTTTGATACTGTACAA------------------------------AATGCCAAGCACAATAAAAGATTGTGAGAGAAAACCCGTAAGT
droVir3 scaffold_12855:9973062-9973365 + TATT----GA-GT--AGTAAT-ATT-C-AAATATGC-GC-AT-GAAATTCACAATTAAAA-A-TCAAATAAA-CA--------AATGTACATTTCTCATG---AA--ATCAAA----------AAC----------AAAAC---TAGAACTGCAAATTCAGAA--GAT--------------AAACGTATAATAATAAC-AAATTG--TTTATTAACTAATTATACGCAAACAT---------TTG-----------TATGTATTGT-------AAAAA-----A-----------------------AATACTGTAGTATTT-GGCTGTAA--TGAAAATCA-------AAGCAAA------CATTCGCTTAATGTGTCGAAATACTACA-----TCA--ACTTTTGATACTGTACAAGAAAGCATA-----AATGTAAAAATGTTGGAACGCCG----------------------------------AG
droMoj3 scaffold_6540:3915719-3916051 + TGAA------------------------------T---G-AT-GAAATTCACAATTGAAA-T-TCAAATAAA-CA--------AATGTAAATTTTTTATG---AA-AAAAAAA-----------A-----------AAAACATGTAGAACTGCAAAATCAGAAAAGA----------------------TGATAAATAG-AAACTG--TTTATTAACTAATTATAAGCGAATATTTCAAACATTTC-----------TAAGTATTGT-------AAAAAGAAAGA-AAAACCA-ACAACAAGAATCAAGCAATTGTAGTATTT-GGCTGTAA--TAGAC------CAACAAAGCAAAT-----CATTTGCTTGAACTGTTGAGATACTACA-----TCA--ACTTTTGATACTATACAT-GAAGCATAAATTAAATGTAAGGATG----AAAGCCAGGCACAAAT-----TTA---AACTG--------AAT
droGri2 scaffold_15074:4228357-4228743 - GGTA----CT-GAATAATACT-ATTCAAAAATATGC-TT-TT-GAGACTCACAATTGAAA-A-TCAAATAAA-CA--------AATGTACATTTTTCGTG---AA--ATCAAA----------AAA---------GCAAAC---TATAACAAC----TCAGAA--GTTCAGAAGTAAAAAAAAAATACAAAGTAAATACAAAACTG--TTTATTAACTAATTGTAAGCAAATATTGCAAACATTTGTATGTTAA--GTTCAAAATGA-------AGA-------GAAAAGTAAAATAACAAAAAAAAAAAAACTGTAGTATTT-GGCTGTAAGATGGAA------CAACAAAGCAAATATAAACATTTGCCATAAATGTTGAAATACTACAATTTACCA--ACTTTTGATACTGTACAATGAAGCATT-----AATGTAAGAACG----AATGCCAAGCACAAAT-----TTA---AAGTG--------AAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TATA----GC-GAACAGTAACC----A-AGATCTTC-TT-G-GCCACTTGTCTATTGAAA-A-CT----GTA-AG--------TGTGTACATTTTG-ATA---AA-AACCAAC----------ATA------------------------------------------------------------------------G-AAGGCC--TCTATTAACTAATTGTAAGCAAGTGCTC-GAGCATTTGCCCGATGT--ATATGTAATGT-------AAAAATAAACG-----------------------AGAAACGTAGTATTT-GGCCGCAA--TAGAAAGCATGCAACAA---------------------------------------------ACC--ATTTTTGATACTGTACAA------------------------------AATGCCAAGCACAAAA-----CTATGAGAATG------CGAATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................................................................................................................................................TAAACG-----------------------AGAAACGTAGTATTT-GGCCGC..................................................................................................................................................................2712.00200010000000010000
.........................................................................................................................................................................................................................TAATTGTAAGCAAGTGCTC-GAGCATT........................................................................................................................................................................................................................................................2611.00100000001000000000
.............................................................................................TTG-ATA---AA-AACCAAC----------ATA------------------------------------------------------------------------G-AAGGCC--............................................................................................................................................................................................................................................................................................2511.00101000000000000000
.......................................................................................................................................................................................................................................................................................TAAACG-----------------------AGAAACGTAGTATTT-GGCCGCAA--T.............................................................................................................................................................3011.00100000001000000000
.....................................................................................................................................................................................................................................................................................AATAAACG-----------------------AGAAACGTAGTATTT-GGCC....................................................................................................................................................................2711.00100100000000000000
........................................G-GCCACTTGTCTATTGAAA-A-CT----.......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
........................................................................................................................................................................................................................................................................................AAACG-----------------------AGAAACGTAGTATTT-GGCCG...................................................................................................................................................................2511.00100000000001000000
.........................................................AAA-A-CT----GTA-AG--------TGTGTA...................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000010000000000
........................................................................................................................................................................................................................CTAATTGTAAGCAAGTGCTC-GAGCA..........................................................................................................................................................................................................................................................2511.00100000001000000000
..............................................................................................................................................................................................................................................................................................................................TATTT-GGCCGCAA--TAGAAAGCATGC..................................................................................................................................................2511.00100000001000000000
................................................................................................................................................................................................................TCTATTAACTAATTGTAAGCAAGTGC..................................................................................................................................................................................................................................................................2611.00100010000000000000
.....................................................................................................................................................................................................................TAACTAATTGTAAGCAAGTGCTC-GAGCATT........................................................................................................................................................................................................................................................3011.00100000001000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GATACTGTACAA------------------------------AAT........................................1511.00100000001000000000
.........................................................................................................................................................................................................................................................................................AACG-----------------------AGAAACGTAGTATTT-GGCCGCAA--..............................................................................................................................................................2711.00100000000010000000
......................................................TTGAAA-A-CT----GTA-AG--------TGTGTACATTT..............................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000010000000
..............................................................................................................................................................................................................................................................................................................................................................A---------------------------------------------ACC--ATTTTTGATACTGTA............................................................................1911.00100100000000000000
droSec2
TATA----GC-GAACAGTAACC----A-AGACCTTC-TT-G-GCCACTTGTCTATTGAAA-A-CT----G-------------TGTGTACATTTTG-ATA---AAAAACCAAC----------ATA------------------------------------------------------------------------G-AAGGCC--TCTATTAACTAATTGTAAGCAAGTGCTT-GAGCATTTGCCCGATGT--ATATGTAATGT-------AAAAATAAACG-----------------------AGAAACGTAGTATTT-GGCCGCAA--TAGAAAGCATGCAACAA---------------------------------------------ACC--ATTTTTGATACTGTACAA------------------------------AATGCCAAGCACAAAA-----CTA-------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................G-GCCACTTGTCTATTGAAA-A-CT----G-------------TGT......................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
..............................................CTTGTCTATTGAAA-A-CT----G-------------TGT......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
..................................................TCTATTGAAA-A-CT----G-------------TGTGTACATTT..............................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000
............................................................................................................................................................................................................................TTGTAAGCAAGTGCTT-GAGCATT........................................................................................................................................................................................................................................................2311.0010100
..............................................................................................................................................................................................................................GTAAGCAAGTGCTT-GAGCATT........................................................................................................................................................................................................................................................2111.0010100
........................................................................................................................................................................................................................CTAATTGTAAGCAAGTGCTT-GAGCATT........................................................................................................................................................................................................................................................2711.0011000
.................................................GTCTATTGAAA-A-CT----G-------------TGTGT....................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100
............................................................................................TTTG-ATA---AAAAACCAAC----------ATA------------------------------------------------------------------------G-AAGGCC--TCT.........................................................................................................................................................................................................................................................................................3011.0010100
...................................................CTATTGAAA-A-CT----G-------------TGTGTACATTTTG-AT.........................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000
......................................................TTGAAA-A-CT----G-------------TGTGTACATT...............................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
...............................................................................................................................................................................................................................................................................................................................ATTT-GGCCGCAA--TAGAAAGCATGCA.................................................................................................................................................2511.0010100
......................................T-G-GCCACTTGTCTATTGAAA-A-CT----G-------------.........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001
dm3
TATA----GC-AAATAGTAACC----G-AGATCT----T-G-GCCACTTGTC--TTGAAA-A-CT----GTA-AG--------TGTGTACATTTTC-ATA---AA-AACCAAC----------ATA------------------------------------------------------------------------G-AAGGCC--TCTATTAACTAATTGTAAGCAAGTGTTA-GATCATTTGCCCGATGT--ATATGTAATGT-------AAAAATAAACG-----------------------AGAAACGTAGTATTT-GGCCGCAA--TGGAAAGCATGCAACAA---------------------------------------------ACC--ATTTTTGATACTGTACAA------------------------------AATGCCAAGCACAAAA-----CTATGAGAATG------CGAATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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.....................................................................................................................................................................................................................................................................................................................GAAACGTAGTATTT-GGCCGCAA--T.............................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
TATA----GC-AAATAGTAACC----G-AGATCT----T-G-GCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................ATATGTAATGT-------AAAAATAAACG-----------------------AGA.....................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................AAACGTAGTATTT-GGCCGCAA--T.............................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TACTGTACAA------------------------------AATGCCAAGCACAA.............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................TAACC----G-AGATCT----T-G-GCCACTTGTC--TTGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................GATGT--ATATGTAATGT-------AAA.......................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................TAACTAATTGTAAGCAAGTGTTA-GATCAT.........................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TTT-GGCCGCAA--TGGAAAGCATGCAACA..............................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................AACGTAGTATTT-GGCCGCAA--TGGAAAG.......................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................TTTC-ATA---AA-AACCAAC----------ATA------------------------------------------------------------------------G-AAGGCC--TC..........................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................A------------------------------------------------------------------------G-AAGGCC--TCTATTAACTA.................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................AAGCATGCAACAA---------------------------------------------ACC--AC.........................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................CGTAGTATTT-GGCCGCAA--TGGAAAG.......................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................AACGTAGTATTT-GGCCGCAA--TG............................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................GGCCGCAA--TGGAAAGCATGCAACA..............................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CC----G-AGATCT----T-G-GCCACTTGTC--TT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TT-GGCCGCAA--TGGAAAGCATGCAACAT---------------------------------------------................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................AGTATTT-GGCCGCAA--TGGAAAGCATGC..................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................GTATTT-GGCCGCAA--TGGAAAGCATGCAAC...............................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................TTGTC--TTGAAA-A-CT----GTA-AG--------TGTGTA...................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TGATACTGTACAA------------------------------AATGCC.....................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AACC----G-AGATCT----T-G-GCCAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TGTACAA------------------------------AATGCCAAGCACAAAA-----CTATGA................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................TTGTC--TTGAAA-A-CT----GTA-AG--------TGTGTACATT...............................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................ATTTGCCCGATGT--ATATGTAA....................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................AAACG-----------------------AGAAACGTAGTATTT-G.......................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TA----GC-AAATAGTAACC----G-AGATCT----T-G-GCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TATTT-GGCCGCAA--TGGAAAGCATGC..................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
............................................................................................................................................................................................................................................................................................G-----------------------AGAAACGTAGTATTT-GGCCGCA.................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................CGTAGTATTT-GGCCGCAA--TGG...........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........AAATAGTAACC----G-AGATCT----T-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................TA---AA-AACCAAC----------ATA------------------------------------------------------------------------G-AAGGCC--TCTATTAAC...................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CATA----GA-GAACAGTAACT----A-AGATCT----T-G-GCCACTTGTCTATTGAAA-A-CT----GAA-AA--------TGTGTACAATTTT-ATA---AA--ACCAAC----------ATA------------------------------------------------------------------------G-AAGGCC--TCTATTAACTAATTGTAAGCAAGTGTTT-GAGCATTTGCCCGATGT--ATATGTAATGT-------AAAAATAAACG-----------------------AGAAATGTAGTATTT-GGCCGCAA--TAGAAAGCATGCAACAA---------------------------------------------ACA--TTTTTTGATACTGTACAA------------------------------AATGCCAAGCGCAACA-----CTATGAGAATG---------ATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................................................................................................................................ATAAACG-----------------------AGAAATGTAGTATTT-GGC.....................................................................................................................................................................2511.0010000010
............................................................................................................................................................................................................................................................................................G-----------------------AGAAATGTAGTATTT-GGC.....................................................................................................................................................................1911.0011000000
..........................................................................................................................................................................................................................................................................................ACG-----------------------AGAAATGTAGTATTT-GGCCGCA.................................................................................................................................................................2511.0010000100
.............ACAGTAACT----A-AGATCT----T-G-GCCACTT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
...................................................................................................................................................................................................................................................TTGCCCGATGT--ATATGTAATGT-------AAAAA.....................................................................................................................................................................................................................2711.0010000100
.......................................................................................................................................................................................................................................TGTTT-GAGCATTTGCCCGATGT--ATATG.......................................................................................................................................................................................................................................2711.0011000000
...............................................................................................................................................................................................................................................................................................................................ATTT-GGCCGCAA--TAGAAAGCATG...................................................................................................................................................2311.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................ACAA------------------------------AATGCCAAGCGCAACA-----CT....................2211.0010001000
....................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATACTGTACAA------------------------------AATGCCAAGCGC...............................2711.0010000100
droYak3
TATA----GA-GAACAGTAACT----A-TGATCT----T-G-GCCACTTGTCTATTGAAA-A-CT----AAA-AA--------TGTGTACAATTTT-ATA---AA-AACCAAC----------ATA------------------------------------------------------------------------G-AAGGCC--TCTATTAACTAATTGTAAGCAAGTGTTT-GAGCATTTGCCCGATGT--ATATGTAATGT-------AAAAATAAACG-----------------------AGAATTGTAGTATTT-GGCCGCAA--TAGAAAGCATGCAACAA---------------------------------------------AGC--ATTTTTGATACTGTACAA------------------------------AATGCCAAGCACAACA-----CT--GAGAATG---------ATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................GCAAGTGTTT-GAGCATTTGCCCGATGT--AT..........................................................................................................................................................................................................................................2913.00300000000003
........................................................................................................................................................................................................................................GTTT-GAGCATTTGCCCGAT................................................................................................................................................................................................................................................1911.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATACTGTACAA------------------------------AATGCC.....................................2111.00101000000000
.........................................................................................................................................................................................................................................................................................AACG-----------------------AGAATTGTAGTATTT-GGC.....................................................................................................................................................................2211.00101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------AATGCCAAGCACAACA-----CT--GA................2111.00101000000000
.......................................................................................................................................................................................................................................................................................................................ATTGTAGTATTT-GGCCGCAA--..............................................................................................................................................................2011.00101000000000
.........................................................................................................................................................................................................................................................................................................................TGTAGTATTT-GGCCGCAA--TAG...........................................................................................................................................................2111.00101000000000
..............................................................................................................................................................................................................................GTAAGCAAGTGTTT-GAGCATT........................................................................................................................................................................................................................................................2111.00101000000000
......................................................................................................................................................................................................................................GTGTTT-GAGCATTTGCCCGATGT--A...........................................................................................................................................................................................................................................2411.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TGTACAA------------------------------AATGCCAAGCACAACA-----CT--G.................2611.00101000000000
..................AACT----A-TGATCT----T-G-GCCACTTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
droEug1
TATT----GA-GTATAGTAACC----G-AGATCTTC-TC-G-GGCATTCGTCTACTGAAATA-CT----GAAAAA--------TATGTACATTTTT-ATA---AA-AACCAAC----------ATG------------------------------------------------------------------------A-AGGGCC--TCTATTAACTAATTGTAAGCAAGTGTTA-GAGCATTTGCCTAATGT--ATATGTAATGT-------AAAAATAAACA-----------------------AGAACTGTAGTATTT-GGCCGCAA--TAGAAAGCATGCAACAA---------------------------------------------ACC--ATTTTTGATACTGTACAA------------------------------AATGCCAAGCACAACA-----TTTTGAGAATG-----------SizeHit CountTotal NormTotal
No Reads
droBia1
TATTAACCGA-G-ATTGTAACC----G-AGATTTTC-TC-G-GACACTCGTCTACAGAAAAA-CT----GAAGAA--------TGTGTAAATTTTT-ATA---TA-AACCAAA----------ATG------------------------------------------------------------------------A-AGGGCC--TCTATTAACTAATTGTAAGCAAGTGTTA-GATCATTTGCCTAGTGT--ACATGTAATGT-------AA-AATAAACA-----------------------AAAACTGTAGTATTT-GGCCGCAA--TAGAAAGCATGCAACAA---------------------------------------------ACA--ATTTTTGATACTGTACAA------------------------------AATGCCAATCACATTA-----TTATGAAAATG---------AASizeHit CountTotal NormTotal
No Reads
droTak1
TATT----GA-GCATTGTAACC----G-AAATTTTC-TC-G-GGCACTCGTCTATTGAAAAA-CT----GAAAAA--------TGTGTAAATTTTT-ATA---AA-AACCAAA----------ATG------------------------------------------------------------------------A-AAGGCC--TCTATTAACTAATTGTAAGCAAGTGCTA-GATCATTTGCCTAATGT--ACATGTAATGT-------AAAAATAAACA-----------------------AGAACTGTAGTATTT-GGCCGCAA--TAGAAAGCATGCAACAA---------------------------------------------ACA--ATTTTTGATACTGTACAA------------------------------AATGCCAATCACAATA-----TTATGAAAGTG---------AASizeHit CountTotal NormTotal
No Reads
droEle1
TGTT----AA-GTGTAGTAATC----G-AGATCTTTTTC-G-GGTACTTCTCTATTGAAA-------------AA--------TATGTACATTTTT-ATA---AA-AACCAAG----------ATG------------------------------------------------------------------------A-AAGGCC--TCTATTAACTAATTGTAAGCGAGTGCTA-GAGCATTTGCCTAATGT--ATATGTAATGT-------AAAAATAAACA-----------------------AGAACTGTAGTATTT-GGCCGTAA--TAGAAAGCATGCAACAA---------------------------------------------ACA--ATTTTTGATACTGTACAA------------------------------AATGCCAAGCACAATA-----TTATGAGAATG---------AASizeHit CountTotal NormTotal
No Reads
droRho1
TATT----GA-CTATAGTAGTT----G-AGCTCTTC-TC-G-AATACTTCTCTATTGAAA-------------AA--------TATGTAAATTTTT-ATA---AA-AATCAAT----------ATG----------AAA-----------------------------------------------------------G-ACGGCC--TCTATTAACTAATTGTAAGCAAGTGTTA-AAGCATTTGCCTAATGT--ATATGTAATGT-------AAAAATAAACA-----------------------AGAACTGTAGTATTT-GGCCGCAA--TAGAAAGCATGCAACAA---------------------------------------------GCA--ATTTTTGATACTGTACAA------------------------------AATGCCAAGCACAATA-----TTATGAACATG---------AASizeHit CountTotal NormTotal
No Reads
droFic1
CATG----GA-GTTCAGTAACC----C-AGATCTTC-CT-G-GGTGCTTCTCTATTGAAAAA-CT----GAA-AA--------AATGTACATTTTT-ATA---AA-TACCAAC----------ATG------------------------------------------------------------------------A-AGGGCC--TCTATTAACTAATTGTAAGCAAGTGTTA-GAGCATTTGCCTAATGT--AAATGTAATGT-------AAAAATAAACA-----------------------AGAACTGTAGTATTT-GGCCGCAA--TAGAAAGCATGCAACAA---------------------------------------------ACA--ATTTTTGATACTGTACA-------------------------------AATGCCAAGCACAACA--------TGAAAATG---------AASizeHit CountTotal NormTotal
No Reads
droKik1
AGCA----GA-------CAACC----G-CAATCTGC-TCGGGGAAAATCCCCGATTGAAA-ACCC-AAAAGA-AA--------TATGTACATTTTT-ATA---AA-GAGCGAA----------ATG------------------------------------------------------------------------A-AGGGCAAATCTATTAACTAATTGTAAGCAAGTGTTA-AAGCATTTGCCTAATGCTAAGATGTAATGT-------AAAAATAAACA-----------------------AGAACTGTAGTATTC-GGCCGCAA--TAGAAAGCATGTAACAA---------------------------------------------ACC--ATTTTTGATACTGTACAA------------------------------AATGCCAAGCACA------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
TATG----CATAAGTAATAATG----A-ATATCTGC-CG-AT-GAAATGCTCGATTGAGA-A-CA----AAA-AACAAAACCCATTGTACATTTTT-ATA---AA--ATCAAA----------ATG------------------------------------------------------------------------A-AGGGCTAAACTATTAACTAATTGTAAGCAAGTGTAA-GATCATTTGCCTAATGT--ATATTTAATATATAAAACAA-----AACA-AAAACAAAAAAACAAA---GAAAAAATCGTAGTATTT-GGCCGCAA--TGGAAAGCATGTAACAAA--------------------------------------------ACA--ATTTTTGATACTGTACAA------------------------------AATGCCAAGCACAATA-----TTGTGAG---------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................................GTGTAA-GATCATTTGCCTAATGT--............................................................................................................................................................................................................................................2312.002000020
.......................................................................................................................................................................................................................................................................................................................................................................................................................GATACTGTACAA------------------------------AATGCCAAGCAC...............................2411.001010000
.......................................................................................................................................................................................................................................................................................................................................CGCAA--TGGAAAGCATGTAA................................................................................................................................................1911.001000010
........................................................................................................................................................................................................................................GTAA-GATCATTTGCCTAAT................................................................................................................................................................................................................................................1911.001000001
.................................................................................................ATA---AA--ATCAAA----------ATG------------------------------------------------------------------------A-AGGGCTAAACT.........................................................................................................................................................................................................................................................................................2611.001000001
..................................................................................................................................................................................................................................................................................................................AAAAAATCGTAGTATTT-GGCCGCAA--T.............................................................................................................................................................2611.001100000
.....................G----A-ATATCTGC-CG-AT-GAAATGCTCGATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000010
.......................................................................................................................................................................................................................................................................................................................ATCGTAGTATTT-GGCCGCA.................................................................................................................................................................1911.001010000
..............................................................................................................................................................................................................................................................................................AAAACAAAAAAACAAA---GAA........................................................................................................................................................................................1940.251010000
.............................................................................................................................................................................................................................................................................AAAACAA-----AACA-AAAACAAAAAA...................................................................................................................................................................................................2280.131010000
..........................................................................................................................................................................................................................................................................................ACA-AAAACAAAAAAACAAA---GG.........................................................................................................................................................................................2190.111010000
..............................................................................................................................................................................................................................................................................................AAAACAAAAAAACAAA---GAAAAAAA...................................................................................................................................................................................24140.071010000
..................................................................................................................................................................................................................................................................................AA-----AACA-AAAACAAAAAAAC.................................................................................................................................................................................................19200.051010000
droBip1
TGTG----CATAGGTAATAATG----A-ATATCTGC-CG-AT-GAAATGCTCGATTGAGA-A-CA----AAA-AACAAAACCCATTGTACATTTTT-ATA---AA--ATCAAA----------ATG------------------------------------------------------------------------A-AGGGCTAAACTATTAACTAATTGTAAGCAAGTGTAA-GATCATTTGCCTAATGT--ATATTTAATAT-------A----TAAAAAAGAAACAAAAAAACAAA---GAAAAAATCGTAGTATTT-GGCCAGAA--TGGAAAGCATGTAACAAA--------------------------------------------ACA--ATTTTTGATACTGTACAA------------------------------AATGCCAAGCACAA-----------------------------SizeHit CountTotal NormTotal
No Reads
dp5
GAG-----CAT-----------------------TA----CT-GAACTTCTCGATTGAACAA-CT----AGA--A--------GCTGTACATTTTT-ATATCGAA--ATCAGCAACAACAAAATTGAAGAGTAGAGCAAAC---CA----------------------------------------------------T-AAGCTA--ATTATTAACTAATTGTAAGCAAGTGTTA-GAGCATTTGCCTAATTCTAATATCTGAAGC-------AA-ATTAGCTA-----------------------AAATCTGTAGTATTTCGGCCGCAA--CAAAACCAAT----CAA---------------------------------------------ACCGATTTTTTGATACTGTACAA------------------------------AATGCCAAGCACAATAAAAGATTGTGAGAGAAAACCCGT-AAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................................................ATCTGTAGTATTTCGGCCGCAA--C.............................................................................................................................................................2311.0010100000000
............................................................AA-CT----AGA--A--------GCTGTACATTTTT-ATATCGAA--.................................................................................................................................................................................................................................................................................................................................................................................................2911.0010010000000
...............................................................................................................................................................................................................................................................................................................................ATTTCGGCCGCAA--CAAAACCA......................................................................................................................................................2111.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................GATACTGTACAA------------------------------AATGCCAAGCACA..............................2511.0010010000000
..............................................CTTCTCGATTGAACAA-CT----AGA--..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..................................................................................................................................GTAGAGCAAAC---CA----------------------------------------------------T-AAGCT...............................................................................................................................................................................................................................................................................................1911.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCCAAGCACAATAAAAGAT.....................2111.0010010000000
...............................................................................................................................................................................................................................................................................................................................................AAAACCAAT----CAA---------------------------------------------ACCGATTT........................................................................................2011.0010100000000
......................................................................................................................................................................................................................................................................................................................ATCTGTAGTATTTCGGCCGCAA--CAA...........................................................................................................................................................2511.0010000100000
..............................................................................................................................................................................................................................GTAAGCAAGTGTTA-GAGC...........................................................................................................................................................................................................................................................1811.0010010000000
droPer2
GAG-----CAT-----------------------TA----CT-GAACTTCTCGATTGAACAA-CT----AGA--A--------ACTGTACATTTTT-ATATCGAA--ATCAGCAACAACAAAATTGAAGAGTAGAGCAAAC---CA----------------------------------------------------T-AAGCTA--ATTATTAACTAATTGTAAGCAAGTGTTA-GAGCATTTGCCTAATTCTAATATCTGAAGC-------AA-ATTAGCTA-----------------------AAATCTGTAGTATTTCGGCCGCAA--CAAAACCAAT----CAA---------------------------------------------ACCGATTTTTTGATACTGTACAA------------------------------AATGCCAAGCACAATAAAAGATTGTGAGAGAAAACCCGTAAGTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................................................................................................................................................A-----------------------AAATCTGTAGTATTTCGGCC....................................................................................................................................................................2113.003300000
.........AT-----------------------TA----CT-GAACTTCTCGATTGAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.003300000
.....................................................ATTGAACAA-CT----AGA--A--------ACT......................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...................................................CGATTGAACAA-CT----AGA--A--------ACTGTACAT................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
......................................................TTGAACAA-CT----AGA--A--------ACTGT....................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.....................................................................................................................................................................................................................................................................................ATTAGCTA-----------------------AAATCTGTAGTATTTCGGC.....................................................................................................................................................................2711.001100000
.........AT-----------------------TA----CT-GAACTTCTCGATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATAAAAGATTGTGAGA..............1811.001010000
.................................................CTCGATTGAACAA-CT----AGA--A--------ACTGC....................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
droVir3
TATT----GA-GT--AGTAAT-ATT-C-AAATATGC-GC-AT-GAAATTCACAATTAAAA-A-TCAAATAAA-CA--------AATGTACATTTCTCATG---AA--ATCAAA----------AAC----------AAAAC---TAGAACTGCAAATTCAGAA--GAT--------------AAACGTATAATAATAAC-AAATTG--TTTATTAACTAATTATACGCAAACAT---------TTG-----------TATGTATTGT-------AAAAA-----A-----------------------AATACTGTAGTATTT-GGCTGTAA--TGAAAATCA-------AAGCAAA------CATTCGCTTAATGTGTCGAAATACTACA-----TCA--ACTTTTGATACTGTACAAGAAAGCATA-----AATGTAAAAATGTTGGAACGCCG----------------------------------AGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................AGAACTGCAAATTCAGAA--GAT--------------AAACGT................................................................................................................................................................................................................................................................................................................2711.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................AATACTGTAGTATTT-GGCTG...................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................TATGTATTGT-------AAAAA-----A-----------------------AAT.....................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................AATGTACATTTCTCATG---AA--ATCAAA----------A................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000001000000000000000000000000000
.................................................................AAATAAA-CA--------AATGTACATTTCTCATG---.....................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................AAATCA-------AAGCAAA------CATTCGCT.........................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TGTACAAGAAAGCATA-----AAT........................................................1911.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................A------CATTCGCTTAATGTGTCGAAATACTA.......................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................CGCTTAATGTGTCGAAATACTA.......................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTGATACTGTACAAGAAAGC...................................................................2311.001000000000000010000000000000000000000000000000000000000000000000
......................................................................................GTACATTTCTCATG---AA--ATCAAA----------AAC----------....................................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
..TT----GA-GT--AGTAAT-ATT-C-AAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000100000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................CTTAATGTGTCGAAATACTACA-----................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................ATA-----AATGTAAAAATGTTGGAAC........................................2211.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................GTAGTATTT-GGCTGTAA--TGAAAATCA-------A.............................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................CA-----TCA--ACTTTTGATACTGTACAAGA.......................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
...........GT--AGTAAT-ATT-C-AAATATGC-GC-....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000010000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTGTACAAGAAAGCATA-----AAT........................................................2011.001000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................GTACAAGAAAGCATA-----AATG.......................................................1911.001000000000000001000000000000000000000000000000000000000000000000
.....................................................................................................................................................CTGCAAATTCAGAA--GAT--------------AAACGTATAAT...........................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTGTACAAGAAAGCATA-----AATGT......................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................AAATTCAGAA--GAT--------------AAACGT................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................TAGTATTT-GGCTGTAA--TGAA..........................................................................................................................................................2011.001010000000000000000000000000000000000000000000000000000000000000
.............................AATATGC-GC-AT-GAAATTCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
...................................................................................AATGTACATTTCTCATG---AA--ATC..............................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
TGAA------------------------------T---G-AT-GAAATTCACAATTGAAA-T-TCAAATAAA-CA--------AATGTAAATTTTTTATG---AA-AAAAAAA-----------A-----------AAAACATGTAGAACTGCAAAATCAGAAAAGA----------------------TGATAAATAG-AAACTG--TTTATTAACTAATTATAAGCGAATATTTCAAACATTTC-----------TAAGTATTGT-------AAAAAGAAAGA-AAAACCA-ACAACAAGAATCAAGCAATTGTAGTATTT-GGCTGTAA--TAGAC------CAACAAAGCAAAT-----CATTTGCTTGAACTGTTGAGATACTACA-----TCA--ACTTTTGATACTATACAT-GAAGCATAAATTAAATGTAAGGATG----AAAGCCAGGCACAAAT-----TTA---AACTG--------AATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................TGAACTGTTGAGATACTAC......................................................................................................1921.002200000
....................................................................................................................................................................................................................................................................................................................................................................................GAACTGTTGAGATACTACA-----TC..............................................................................................2120.501100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGGATG----AAAGCCAGGCACAAAT-----TT....................2720.501100000
.................................................................................................................................................................................................................................................................................................................................................................CAAAT-----CATTTGCTTGAACT...................................................................................................................1920.501000010
...................................................................................................................................................................................................................................................................................................................................................................AAT-----CATTTGCTTGAACTGT.................................................................................................................1920.501000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGGATG----AAAGCCAGGCACAAA............................2420.501000001
...............................................................................................................................................................................................................................................................................................................................ATTT-GGCTGTAA--TAGAC------CAACA..............................................................................................................................................2220.501100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATGTAAGGATG----AAAGCC.....................................2020.501100000
....................................................................................................................................................................................................................................................................................................................................................................AT-----CATTTGCTTGAACTGTTGAGATACTAC......................................................................................................2920.501100000
..................................................................................................................................................................................................................................................................................................................AAGCAATTGTAGTATTT-GG......................................................................................................................................................................1920.501100000
droGri2
GGTA----CT-GAATAATACT-ATTCAAAAATATGC-TT-TT-GAGACTCACAATTGAAA-A-TCAAATAAA-CA--------AATGTACATTTTTCGTG---AA--ATCAAA----------AAA---------GCAAAC---TATAACAAC----TCAGAA--GTTCAGAAGTAAAAAAAAAATACAAAGTAAATACAAAACTG--TTTATTAACTAATTGTAAGCAAATATTGCAAACATTTGTATGTTAA--GTTCAAAATGA-------AGA-------GAAAAGTAAAATAACAAAAAAAAAAAAACTGTAGTATTT-GGCTGTAAGATGGAA------CAACAAAGCAAATATAAACATTTGCCATAAATGTTGAAATACTACAATTTACCA--ACTTTTGATACTGTACAATGAAGCATT-----AATGTAAGAACG----AATGCCAAGCACAAAT-----TTA---AAGTG--------AAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.........................................................................................................................................................................................................................................................................GA-------AGA-------GAAAAGTAAAATAACA................................................................................................................................................................................................2111.00110

Generated: 05/18/2015 at 09:10 AM