ID:dsi_4968 |
Coordinate:2r:5272528-5272598 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
CDS [2r_5272203_5272527_-]; exon [2r_5271891_5272527_-]; CDS [2r_5272599_5272782_-]; exon [2r_5272599_5272782_-]; intron [2r_5272528_5272598_-]
No Repeatable elements found
| ##################################################-----------------------------------------------------------------------################################################## TGCAAGGCGGACCACCCGTGCGGCTACAGCAAGGGATTCGATTATCCATGGTAAGTGGCCAGGCAGGACCACCATGTGGTGAAGCTTTAATGAGCTCACCAATCTCCTCGATATTTTCCAGGTGCTTTGTGGGCGATGAGTCGGACCAGTGGCGCAAGTGCAGCGATCGGT **************************************************.....(((........((........(((((.(((((....))))))))))......))........))).************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M023 head |
SRR618934 dsim w501 ovaries |
SRR553487 NRT_0-2 hours eggs |
SRR553486 Makindu_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|
| ...................................................................................................................................GGCGATGAGTCGGACCAGTGGCGC................ | 24 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 |
| ...................................................................................................................................GGCGATGAGTCGGACCAGTGGC.................. | 22 | 0 | 1 | 2.00 | 2 | 2 | 0 | 0 | 0 |
| .............................................................................................................................TTTGTGGGCGATGAGTCGGACCAGT..................... | 25 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| .............................................................................................................................................CGGACCAGTGGCGCAAGTGCAG........ | 22 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..................................................................................................................................GGGCGATGAGTCGGACCAGT..................... | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ......................................................................................................................................GATGAGTCGGACCAGTGGC.................. | 19 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 |
| ..................................................................................................................TTTCCTGGTGCTTTGGGCGCG.................................... | 21 | 3 | 4 | 0.25 | 1 | 0 | 0 | 1 | 0 |
| ..................................................................................AGCTTTGATGAGCTAAC........................................................................ | 17 | 2 | 20 | 0.15 | 3 | 0 | 3 | 0 | 0 |
| ..................................................................................AGCTTTGATGAGCTC.......................................................................... | 15 | 1 | 20 | 0.15 | 3 | 0 | 3 | 0 | 0 |
| ..........................................................................................................................TGGTTTGTAGGCGATGAGTTG............................ | 21 | 3 | 7 | 0.14 | 1 | 0 | 0 | 0 | 1 |
| ..............................................................................GATAAGCTTTAATGAGCTCC......................................................................... | 20 | 3 | 7 | 0.14 | 1 | 0 | 1 | 0 | 0 |
| ..................................................................................AGCTTTAATGAGCTAA......................................................................... | 16 | 1 | 9 | 0.11 | 1 | 0 | 1 | 0 | 0 |
| .............ACCCGTGCGGGAACACCA............................................................................................................................................ | 18 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 |
| .........................ACAGCAAGAGACTCGAGTA............................................................................................................................... | 19 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 |
| ...................................................................................GCTTTAATGAGCTAA......................................................................... | 15 | 1 | 20 | 0.05 | 1 | 0 | 1 | 0 | 0 |
|
ACGTTCCGCCTGGTGGGCACGCCGATGTCGTTCCCTAAGCTAATAGGTACCATTCACCGGTCCGTCCTGGTGGTACACCACTTCGAAATTACTCGAGTGGTTAGAGGAGCTATAAAAGGTCCACGAAACACCCGCTACTCAGCCTGGTCACCGCGTTCACGTCGCTAGCCA
**************************************************.....(((........((........(((((.(((((....))))))))))......))........))).************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553488 RT_0-2 hours eggs |
M024 male body |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|
| .........................................................................................TATTCGAGTGCTTAGAGG................................................................ | 18 | 2 | 7 | 0.14 | 1 | 1 | 0 | 0 |
| .....................................................................................AAATTAGTCGAGTTGTTA.................................................................... | 18 | 2 | 15 | 0.07 | 1 | 0 | 1 | 0 |
| .................CACGCCGATGTAGTT........................................................................................................................................... | 15 | 1 | 17 | 0.06 | 1 | 0 | 0 | 1 |
Generated: 04/23/2015 at 12:04 PM