ID:

dsi_4958

 Coordinate:

3l:10852954-10853126 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-16.3 -16.2 -16.2

Flybase annnotation

exon [3l_10853127_10853887_-]; CDS [3l_10853127_10853836_-]; exon [3l_10852454_10852953_-]; CDS [3l_10852454_10852953_-]; intron [3l_10852954_10853126_-]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GATGATTTCCTGCAGCGCCGCAATGTGGATCCGCTTCGTCTGCCGCAGCGGTAGGTATAGCACGTGAATCGCGAAGCAATAATATTAACTTATTGTTATGACTAAAGAATCAACCAGAAACTTAAAAGTTTTGTACTCAATTTCGTATTTCTATAATCATTCTTTCCAATATATCGTTTTATGCACACTTATCTCTAATCCAATTCCCCATATTCATTTGCAGCTGCTACTTCCGCTTCCCGAGCACGGAGATTCGTATCGAGTTCGAGAGCT
**************************************************.........(((.((((((..((.((((((((.......)))))))).))...(((((((......((((((....))))))((((........))))..........)))))))....((((......))))............................)))))).)))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR553485
Chicharo_3 day-old ovaries
 O002
Head
 SRR553488
RT_0-2 hours eggs
 M023
head
 GSM343915
embryo
 M024
male body
..........................................................................................TATTGTGATGACTTAAGA..................................................................................................................................................................... 18 2 7 1.29 9 6 3 0 0 0 0 0
.............................TCCGCTTCGTCTGCCGCAG................................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 0 1 0 0
................................................................................................................................................................................................................................TGCTACTTCCGCTTCCCGAGCACGGAGA..................... 28 0 1 1.00 1 0 0 0 1 0 0 0
........................GTGGATCCGCTTCGTCTGCCT.................................................................................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................................................GTACTCAATTTCGTATTT........................................................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0
..........................................................................................TATTGTGATGACTTAAGAACC.................................................................................................................................................................. 21 3 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................................................................TCTTTCCAATAGATCGGT............................................................................................... 18 2 2 0.50 1 0 0 1 0 0 0 0
..........................................................................................TATTATGATGACTAAAGA..................................................................................................................................................................... 18 2 8 0.38 3 0 3 0 0 0 0 0
..........................................................................................TATTGTGATGACTTAAGAA.................................................................................................................................................................... 19 2 4 0.25 1 1 0 0 0 0 0 0
................GCCGCAGTGTGGACCCGCTC............................................................................................................................................................................................................................................. 20 3 8 0.13 1 0 0 0 0 0 1 0
...........................................................................................................................................................................................................................................................ATTGGTCTTGAGTTCGAGAG.. 20 3 9 0.11 1 0 0 0 1 0 0 0
....................CTATGTCGCTCCGCTTCGT.......................................................................................................................................................................................................................................... 19 3 20 0.10 2 0 0 0 2 0 0 0
..............GCACCGGATTGTGGATCC................................................................................................................................................................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 0 1

Anti-sense strand reads

CTACTAAAGGACGTCGCGGCGTTACACCTAGGCGAAGCAGACGGCGTCGCCATCCATATCGTGCACTTAGCGCTTCGTTATTATAATTGAATAACAATACTGATTTCTTAGTTGGTCTTTGAATTTTCAAAACATGAGTTAAAGCATAAAGATATTAGTAAGAAAGGTTATATAGCAAAATACGTGTGAATAGAGATTAGGTTAAGGGGTATAAGTAAACGTCGACGATGAAGGCGAAGGGCTCGTGCCTCTAAGCATAGCTCAAGCTCTCGA
**************************************************.........(((.((((((..((.((((((((.......)))))))).))...(((((((......((((((....))))))((((........))))..........)))))))....((((......))))............................)))))).)))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
 M024
male body		 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
.............................................................................................................................................................................................ATCGAGATTGGGTTAAGGAGT............................................................... 21 3 2 0.50 1 1 0 0 0 0
...................................................................................................................TCTTTGAAGTTTCATATCATG......................................................................................................................................... 21 3 5 0.40 2 2 0 0 0 0
............GTCGCGGTGTTATACCTAGGA................................................................................................................................................................................................................................................ 21 3 3 0.33 1 0 0 1 0 0
............................................................................................AACATTACTGATCTCTGAGT................................................................................................................................................................. 20 3 3 0.33 1 0 1 0 0 0
.........................................................................................................TCTTAGTTGGTCTAT......................................................................................................................................................... 15 1 10 0.30 3 2 1 0 0 0
..................................................................................................................................................................AAAGGTGATATAGCAA............................................................................................... 16 1 5 0.20 1 0 1 0 0 0
.........................................................................................................TCCTAGTTGGTCTTT......................................................................................................................................................... 15 1 18 0.17 3 2 0 0 0 1
.........................................................................................................TCTTAGTTGGTCTTA......................................................................................................................................................... 15 1 19 0.16 3 0 0 0 3 0
.....AAAGGACGTCGAGTCGTTAG........................................................................................................................................................................................................................................................ 20 3 20 0.05 1 0 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:10852904-10853176 - dsi_4958 GATGATTTCCTGCAGCGCCGCAATGTGGATCCGCTTCGTCTGCCGCAGCGGTAGGTAT----------------AGCAC---GTGAATCGC--GA------AGCAA-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATA----------------------------------------------------------------------------TTAACTTATTGTTATGACTAAAGAATCAACCAGAAACTTAAA--AGTTTTGTACTCAATTTCGTATT--------TCTAT----AATCATTCTTTCCAAT----ATATCGTTTTATGCACACTTATCTCTAATCCAATT------CC-CCATATTC--------------------------ATTTGCAGCTGCTACTTCCGCTTCCCGAGCACGGAGATTCGTATCGAGTTCGAGAGCT
droSec2 scaffold_0:3332585-3332842 - GATGATTTCCTGCAGCGCCGCAATGTGGATCCGCTTCGTCTGCCTCAGCGGTAGGTAT----------------AGCAC---GTGAATCGC--GG------AACAA-T--------ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACACA--------A-----------------------------------------------------------------------------------AACTTATTGTTATGACTAAAGTAT---------TTTTATTATTACTT------------CGTATT--------TCTAT----AATCATTCTTTCCAAT----ATATCGTTTTATGCACACTTATCTCTAATCGAATT------CA-CCATATTC--------------------------ATTTGCAGCTGCTACTTCCGCTTCCCGAGCACGGAGATTCGTATCGAGTTCGAGAGCT
dm3 chr3L:11110220-11110454 - GATGATTTCCTGCAGCGCCGCAATGTGGATCCACTTCGTTTGCCGCAGCGGTAGGTAT----------------ACCACCAAGGGAATCGC--GA------AGCAA-T--------ATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACATT--------A--ATA----------------------------------------------------------------------------TTAACTTATTGTT-TGACTAAAGAA----------------------------------------------------------------TTCTTTCCAAT----ATACCATTTTATGCACACTTATCTCTAATGCAATG------CC-CCATATTC-------------------------ATATTGCAGCTGCTACTTCCGCTTCCCGAGCACGGAGATTCGTATCGAGTTCGAGAGCT
droEre2 scaffold_4784:11116581-11116912 - GACGATTTCCTGCAGCGGCGCAACGTGGATCCGCTTCGTCTGCCGCAGCGGTAGGTATACATATGTACATGAGTAGCAC---GTGAATCGC--GA------TGCGA-T--------ATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACACA--------ATAACAT------------------------------TTTTGAAATAACAAAGTTGATATAAAAAAAAA-----AATTGAAAA-TACTT--TTTTATGACTAAAAAA--AATCAGAAATTTGTA--AACTT------------TGTATT--------TCTATGGGAAATCATTCTAGCCAGTCCTAATATCATTTCATGCTCATTTATCTCTAAACCCATT------TC-CCCCATTC--------------------------TTTTGCAGCTGCTACTTCCGCTTCCCGAGCACGGAGATTCGCATCGAGTTCGAGAGTT
droYak3 3L:11138586-11138906 - GACGATTTCCTGCAGCGGCGCAACGTGGATCCGCTTCGTCTGCCGCAGCGGTAGGTAT----------------A-CAT---ATGAATCGC--GG------A-----T--------ATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCACG--------ATAACAT------------------------------TCTTGAAATAACACATTTGATATCGAGAAAGA-----AATTGCATTTAACCAATTGTTATGACTAAAGAAAACAACAGAATTTTGTA--AACTTTGTTTTC-------TTTT--------TCTGTGGGAAATCATTCTTCCCAGACATAATATCACTTTATGCACATTTATCTCTAATGCCATT------TC-CCCCATTC--------------------------TTTTGCAGCTGCTACTTCCGCTTCCCGAGCACGGAGATTCGCATCGAGTTTGAGAGTT
droEug1 scf7180000409711:2986417-2986761 - GATGATTTTTTGCAGCGGCGCAATGTGGATCCACTTCGTTTGTCGCAGCGGTAAGTGA----------------AGTTC---GTAAATCGT--AG------ATGGT-C-----GAAACTTA-----------TCGGCATTAATACAGCCGGAAATATTCCGGTATTTATGGAATATGATTTTACGAA-----------------------------TAACTATCTAT--------------------------------------------------------GTTTTTTTTATTATTAAC--------------------------GTCAAT---TTTTA---TTCTCATAGAATTGATTGGTTT--------TCTAATAAGATGTTCCTAAATC-CTAAATT-------------AATTGTTGTACCT-ATAAAACTA------TGTATTTATAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-CATCAAATTCCCTTTC--------------------------ATTTCCAGCTGCTACTTCCGCTTTCCCAGCACGGAGATTCGCATCGAATTCGAGAGTT
droBia1 scf7180000302193:506114-506449 + GACGATTTCCTGCAGCGGCGCAACGTGGATCCACTTCGTTTGCCCCAGCGGTGAGTTGATAGAGGGACT-AAGTGGGG-----------------------------------AAAAAGAACA------------------------------------------------------------------ATTATATTTCGGT------------AAGAACTTAATAC------GC------C------------AC----CCGC----AC-------------GCTTTATCT--------------------------------------------CCTTT---ATCTGATGGATCTGGTTGTTTGTGATATTAT----GGAAAGGCGTGGAAAGAGGGAATAAGCATTAGAAAATGAAATGGAATACCTTA-AAGGCAA------ATCTTTAGT------------ACT------------------------------------------------------------------------------------------------------------------------------TC----------------------------------------AATATTTATCTCTAATCGATGTG-TT--TT-TGCCTTCT--------------------------CCACGCAGCTGCTACTTCCGCTTTCCCAGTACGGAGATTCGCATCGAGTTCGAGAGTT
droTak1 scf7180000415185:302872-303276 - GACGATTTCCTGCAGCGGCGCAACGTGGATCCACTTCGTCTGCCTCAGCGGTAAGTAT----------------AGGA-----------------------------------AAAAAGTATACAAAAAAGCAGAGCATTTATAAAC-CTGA----------------AGGAATATTATCTAACAAAATATTATATTTTGTTAATCAAAATTTTAAGAATTACATACGTTTGT---------------------GT----TCAT----TG-------------GTTTTATCT--------------------------------------------CTTTTCCTATCTA---AATC--------CATGAAATCATCTAATGAAAGGTGTGAAAAGAGATAATCA-------------AATTGGTATACCA-A-AAAACAA------TTCACTACTAAAATTAGTAATTCTTCAAAATATT----------------------------TATAAATTTAAAAA-TAT---------------------------------------------------------------------------------------AGACAGG-----------------------TCCTCTCTAATCCACTTG--T--TT-CACTTTCC--------------------------CTTTGCAGCTGCTACTTCCGCTTTCCCAGTACGGAGATTCGCATAGAGTTCGAGAGTT
droEle1 scf7180000490564:2013243-2013436 - GATGATTTCTTGCAGCGCCGCAACGTGGATCCACTTCGTCTGCCGCAACGGTAAGTGG----------------AGCTT---GTAAATCGT--AA------AGGAA-C-----GAAATGTGCA------------------------------------------------------------------ATTTTTTTTTGGT------------ATGTTTTCT--------------------------------------------ATAG-------------------------------------------------------------------------------------------------------------------------------------ACTCTAGAAGTGTAATTATAAAACACT--------A-----------------------------------------------------------------------------------AACT------------------------------------------------------TAGTTTATCATCGCTTTTA------------------TGG----GTATGGTTT--AGTAAACTTATCTCT--------------------------------------------------------------------------------------------------------------
droRho1 scf7180000780024:281130-281212 + TATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTAATCAA-TT------GT-TTCCTTTC--------------------------ATTTGCAGCTGTTATTTCCGCTTTCCAAGCACGGAGATTCGCATCGAGTTCGAAAGTT
droFic1 scf7180000454107:460963-461247 - GACGATTTCCTGCAGCGCCGCAACGTGGACCCACTTCGTCTGCCGCAGCGGTAAGTAG----------------AGTTC-----------------------------------------------------------------------------------------------------------------------------------------------CATTCAATTGTTATTACATGATTTCTAAAATTGTTTTTTCGT----TGGAGGTTTTGAAGTGTTTTATTTATTATTAATTATTTAATATAAAGTGTCTTGAAACAGACAACTAA---------TC-------------------------TAT----A----------AAAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGTCAGCTTT--------------AATCTTGATCTCTTATTAAATT------TA-CTATCTTT--------------------------TCTTGCAGATGCTACTTCCGTTTTCCCAGCACGGAAATTCGCATAGAGTTCGAGAGTT
droKik1 scf7180000302686:336758-336916 + GACGACTTCCTGCAGCGCCGTAATGTTGATCCATTGCGTTTGCCGCAACGGTAAGTCA----------------AATTA---CCAAAGTGG--AA------G-AAAAT-----A------------------------------------------TTCCTATA---ACC------------------------------------------------------------------------------------GAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTT--------------------------CTTTGCAGCTGCTATTTTCGTTTTCCCAGCACGGAGATTCGGATTGAGTTTGAGAGTT
droAna3 scaffold_13337:5401721-5401888 - GACGACTTCTTGCAGCGCCGCAACGTCGATCCATTGCGGTTGCCCCAGCGGTAAGAAA------------------CT---------TGCCATTAAAATTTG-AAAT-----------------------------------------------------TAAA---TCT------------------------------------------------------------------------------AAAATTGTATTTGTGGTTTGTGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------------------------CTTTGCAGATGCTACTTCCGATTCCCCAGCACGGAGATTCGAATCGAGTTTGAGAGTT
droBip1 scf7180000396371:726806-726963 - GACGACTTCTTGCAGCGTCGCAATGTCGATCCGTTGCGGTTGCCCCAGCGGTAAGAAA------------------TC---------TCCCAAAAATAATTA-ATAT-----------------------------------------------------TAAA---ATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-AC------TC-CCCTCTTG--------------------------TATTGCAGTTGCTACTTCCGATTCCCCAGTACGGAGATTCGAATCGAGTTTGAGAGTT
dp5 XR_group6:10641871-10641949 - C-------------------------TAATCCGTTACGTTAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTC--------------------------CCTTGCAGATGCTACTTTCGGTTCCCCAGCACGGAGATTCGGATAGAGTTTGAGAGCT
droPer2 scaffold_20:552980-553058 - C-------------------------TAATCCGTTACGTTAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTC--------------------------CCTTGCAGATGCTACTTTCGGTTCCCCAGCACGGAGATTCGGATAGAGTTTGAGAGCT
droWil2 scf2_1100000004768:2243878-2244081 + GATGATTTTCTGCAGCGTCGCAATGCGGATAATCTGCGTCTGCCGCAACGGTAAGAAG----------------GATTT---CATTTTTGA--TA------A-A----TTATG--------------------------------------------------------------------------------CATTC------------------------CACTCAATTACTC------A------------AC----CCTT----TC-------------TCTTTCTCT--------------------------------------------C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTCTCTCTCT--T--TT-CATTTTGT--------------------------GTCTTCAGTTGTTATTTCCGCTTTCCCAGCACGGAAATTCGTATTGAGTTCGAGAGTT
droVir3 scaffold_13049:23163682-23163738 - --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCAGCTGCTTCTTTCGATTTCCGAGCACCGAGATACGCATCGAATTCGAGAGCT
droMoj3 scaffold_6680:17768991-17769151 - GATGACTTTCTACAGCGACGCAATGTAGATCCACTGCGACTGCCCCAGCGGTAAATGC------------------TT---------TAACTAAA-------------TGATC--------------------------------------------------------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------ATT---AATTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCAATTCA--T--TT-TGCCTTTG--------------------------CTTTGCAGTTGCTTCTTTCGATTTCCGAGCACCGAGATACGCATCGAGTTCGAGAGTT
droGri2 scaffold_15110:18419233-18419395 - GATGATTTCCTGCAGCGACGCAATGTGGATCCACTGCGATTGCCGCAACGGTAAGTGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATTCGCTTT---GCAATT--------------CTCCTCAATTCATGTTGAATCCATATCAATTTTGCAGCTGTTTCTTTCGATTTCCGAGCACCGAGATACGCATCGAGTTTGAGAGCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
GATGATTTCCTGCAGCGCCGCAATGTGGATCCGCTTCGTCTGCCGCAGCGGTAGGTAT----------------AGCAC---GTGAATCGC--GA------AGCAA-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATA----------------------------------------------------------------------------TTAACTTATTGTTATGACTAAAGAATCAACCAGAAACTTAAA--AGTTTTGTACTCAATTTCGTATT--------TCTAT----AATCATTCTTTCCAAT----ATATCGTTTTATGCACACTTATCTCTAATCCAATT------CC-CCATATTC--------------------------ATTTGCAGCTGCTACTTCCGCTTCCCGAGCACGGAGATTCGTATCGAGTTCGAGAGCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................TCCGCTTCGTCTGCCGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTACTTCCGCTTCCCGAGCACGGAGA.....................2811.00100000000010000000
........................GTGGATCCGCTTCGTCTGCCT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACTCAATTTCGTATT--------T....................................................................................................................................................................1811.00100000100000000000
droSec2
GATGATTTCCTGCAGCGCCGCAATGTGGATCCGCTTCGTCTGCCTCAGCGGTAGGTAT----------------AGCAC---GTGAATCGC--GG------AACAA-T--------ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACACA--------A-----------------------------------------------------------------------------------AACTTATTGTTATGACTAAAGTAT---------TTTTATTATTACTT------------CGTATT--------TCTAT----AATCATTCTTTCCAAT----ATATCGTTTTATGCACACTTATCTCTAATCGAATT------CA-CCATATTC--------------------------ATTTGCAGCTGCTACTTCCGCTTCCCGAGCACGGAGATTCGTATCGAGTTCGAGAGCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...GATTTCCTGCAGCGCCGCAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACGGAGATTCGTATCGAGTTC.......2311.0010100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCGAGTTCGAGAGCT1811.0010010
dm3
GATGATTTCCTGCAGCGCCGCAATGTGGATCCACTTCGTTTGCCGCAGCGGTAGGTAT----------------ACCACCAAGGGAATCGC--GA------AGCAA-T--------ATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACATT--------A--ATA----------------------------------------------------------------------------TTAACTTATTGTT-TGACTAAAGAA----------------------------------------------------------------TTCTTTCCAAT----ATACCATTTTATGCACACTTATCTCTAATGCAATG------CC-CCATATTC-------------------------ATATTGCAGCTGCTACTTCCGCTTCCCGAGCACGGAGATTCGTATCGAGTTCGAGAGCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......TTCCTGCAGCGCCGCAATGTGGATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TTTCCTGCAGCGCCGCAATGTGGATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCAATG------CC-CCATATTC-------------------------...........................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.ATGATTTCCTGCAGCGCCGCAATGTGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATTCGTATCGAGTTCGAGAGC.2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......TCCTGCAGCGCCGCAATGTGGATCCACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCTTCCCGAGCACGGAGATT...................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TCCTGCAGCGCCGCAATGTGGATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ACTTCGTTTGCCGCAGCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCCGAGCACGGAGA.....................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........CTGCAGCGCCGCAATGTGGATCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATGTGGATCCACTTCGTTTGCCGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GCCGCAATGTGGATCCACTTCGTTTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................GA------AGCAA-T--------ATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACATT--------A--AT.............................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTCGTATCGAGTTCGAGAGC.2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGCAGCTGCTACTTCCGC.....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCGAGCACGGAGATTCGT................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TTTCCTGCAGCGCCGCAATGTGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
............CAGCGCCGCAATGTGGATCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGATTCGTATCGAGTTCGAGA...2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TCCACTTCGTTTGCCGCAGCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AATGTGGATCCACTTCGTTTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATGTGGATCCACTTCGTTTGCCGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------------------------------------------------TTCTTTCCAAT----ATACCATTTTATGC..........................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TCCTGCAGCGCCGCAATGTGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-TGACTAAAGAA----------------------------------------------------------------TTCTTTCCA..............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CCACTTCGTTTGCCGCAGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATTCGTATCGAGTTCGAG....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........CCTGCAGCGCCGCAATGTGGATCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACGGAGATTCGTATCG............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCAATG------CC-CCATATTC-------------------------ATATTGCAG..................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATG------CC-CCATATTC-------------------------ATATTGCAG..................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGGAGATTCGTATCGAGTTC.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
...............CGCCGCAATGTGGATCCACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................TCCACTTCGTTTGCCGCAGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CGCCGCAATGTGGATCCACTTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ATGTGGATCCACTTCGTTTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCGAGCACGGAGATTCGTATCGAG..........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CAGCGCCGCAATGTGGATCCACTTCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCTTCCCGAGCACGGAGA.....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
....ATTTCCTGCAGCGCCGCAATGTGGATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TCCACTTCGTTTGCCGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CAATGTGGATCCACTTCGTTTGCCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TTCCTGCAGCGCCGCAATGTGGATCCACT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................TGCCGCAGCGGTAGGTGC----------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
GACGATTTCCTGCAGCGGCGCAACGTGGATCCGCTTCGTCTGCCGCAGCGGTAGGTATACATATGTACATGAGTAGCAC---GTGAATCGC--GA------TGCGA-T--------ATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACACA--------ATAACAT------------------------------TTTTGAAATAACAAAGTTGATATAAAAAAAAA-----AATTGAAAA-TACTT--TTTTATGACTAAAAAA--AATCAGAAATTTGTA--AACTT------------TGTATT--------TCTATGGGAAATCATTCTAGCCAGTCCTAATATCATTTCATGCTCATTTATCTCTAAACCCATT------TC-CCCCATTC--------------------------TTTTGCAGCTGCTACTTCCGCTTCCCGAGCACGGAGATTCGCATCGAGTTCGAGAGTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................GCTTCGTCTGCCGCAGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTTCCGCTTCCCGAGCACGGA.......................2411.0010001000
...................GCAACGTGGATCCGCTTCGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.........................TGGATCCGCTTCGTCTGCCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCCGCTTCCCGAGCACGGA.......................2111.0010001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGGAGATTCGCATCGAGTTC.......2211.0010000010
.......................CGTGGATCCGCTTCGTCTGCCGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000
....ATTTCCTGCAGCGGCGCAACGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
droYak3
GACGATTTCCTGCAGCGGCGCAACGTGGATCCGCTTCGTCTGCCGCAGCGGTAGGTAT----------------A-CAT---ATGAATCGC--GG------A-----T--------ATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCACG--------ATAACAT------------------------------TCTTGAAATAACACATTTGATATCGAGAAAGA-----AATTGCATTTAACCAATTGTTATGACTAAAGAAAACAACAGAATTTTGTA--AACTTTGTTTTC-------TTTT--------TCTGTGGGAAATCATTCTTCCCAGACATAATATCACTTTATGCACATTTATCTCTAATGCCATT------TC-CCCCATTC--------------------------TTTTGCAGCTGCTACTTCCGCTTCCCGAGCACGGAGATTCGCATCGAGTTTGAGAGTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
GACGATTTCCTGCAGCGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGATTCGCATCGAGTTT.......2011.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACTTCCGCTTCCCGAGCACGGAGATT...................2911.00100000000001
droEug1
GATGATTTTTTGCAGCGGCGCAATGTGGATCCACTTCGTTTGTCGCAGCGGTAAGTGA----------------AGTTC---GTAAATCGT--AG------ATGGT-C-----GAAACTTA-----------TCGGCATTAATACAGCCGGAAATATTCCGGTATTTATGGAATATGATTTTACGAA-----------------------------TAACTATCTAT--------------------------------------------------------GTTTTTTTTATTATTAAC--------------------------GTCAAT---TTTTA---TTCTCATAGAATTGATTGGTTT--------TCTAATAAGATGTTCCTAAATC-CTAAATT-------------AATTGTTGTACCT-ATAAAACTA------TGTATTTATAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-CATCAAATTCCCTTTC--------------------------ATTTCCAGCTGCTACTTCCGCTTTCCCAGCACGGAGATTCGCATCGAATTCGAGAGTTSizeHit CountTotal NormTotal
No Reads
droBia1
GACGATTTCCTGCAGCGGCGCAACGTGGATCCACTTCGTTTGCCCCAGCGGTGAGTTGATAGAGGGACT-AAGTGGGG-----------------------------------AAAAAGAACA------------------------------------------------------------------ATTATATTTCGGT------------AAGAACTTAATAC------GC------C------------AC----CCGC----AC-------------GCTTTATCT--------------------------------------------CCTTT---ATCTGATGGATCTGGTTGTTTGTGATATTAT----GGAAAGGCGTGGAAAGAGGGAATAAGCATTAGAAAATGAAATGGAATACCTTA-AAGGCAA------ATCTTTAGT------------ACT------------------------------------------------------------------------------------------------------------------------------TC----------------------------------------AATATTTATCTCTAATCGATGTG-TT--TT-TGCCTTCT--------------------------CCACGCAGCTGCTACTTCCGCTTTCCCAGTACGGAGATTCGCATCGAGTTCGAGAGTTSizeHit CountTotal NormTotal
No Reads
droTak1
GACGATTTCCTGCAGCGGCGCAACGTGGATCCACTTCGTCTGCCTCAGCGGTAAGTAT----------------AGGA-----------------------------------AAAAAGTATACAAAAAAGCAGAGCATTTATAAAC-CTGA----------------AGGAATATTATCTAACAAAATATTATATTTTGTTAATCAAAATTTTAAGAATTACATACGTTTGT---------------------GT----TCAT----TG-------------GTTTTATCT--------------------------------------------CTTTTCCTATCTA---AATC--------CATGAAATCATCTAATGAAAGGTGTGAAAAGAGATAATCA-------------AATTGGTATACCA-A-AAAACAA------TTCACTACTAAAATTAGTAATTCTTCAAAATATT----------------------------TATAAATTTAAAAA-TAT---------------------------------------------------------------------------------------AGACAGG-----------------------TCCTCTCTAATCCACTTG--T--TT-CACTTTCC--------------------------CTTTGCAGCTGCTACTTCCGCTTTCCCAGTACGGAGATTCGCATAGAGTTCGAGAGTTSizeHit CountTotal NormTotal
No Reads
droEle1
GATGATTTCTTGCAGCGCCGCAACGTGGATCCACTTCGTCTGCCGCAACGGTAAGTGG----------------AGCTT---GTAAATCGT--AA------AGGAA-C-----GAAATGTGCA------------------------------------------------------------------ATTTTTTTTTGGT------------ATGTTTTCT--------------------------------------------ATAG-------------------------------------------------------------------------------------------------------------------------------------ACTCTAGAAGTGTAATTATAAAACACT--------A-----------------------------------------------------------------------------------AACT------------------------------------------------------TAGTTTATCATCGCTTTTA------------------TGG----GTATGGTTT--AGTAAACTTATCTCT--------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TATA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTAATCAA-TT------GT-TTCCTTTC--------------------------ATTTGCAGCTGTTATTTCCGCTTTCCAAGCACGGAGATTCGCATCGAGTTCGAAAGTTSizeHit CountTotal NormTotal
No Reads
droFic1
GACGATTTCCTGCAGCGCCGCAACGTGGACCCACTTCGTCTGCCGCAGCGGTAAGTAG----------------AGTTC-----------------------------------------------------------------------------------------------------------------------------------------------CATTCAATTGTTATTACATGATTTCTAAAATTGTTTTTTCGT----TGGAGGTTTTGAAGTGTTTTATTTATTATTAATTATTTAATATAAAGTGTCTTGAAACAGACAACTAA---------TC-------------------------TAT----A----------AAAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGTCAGCTTT--------------AATCTTGATCTCTTATTAAATT------TA-CTATCTTT--------------------------TCTTGCAGATGCTACTTCCGTTTTCCCAGCACGGAAATTCGCATAGAGTTCGAGAGTTSizeHit CountTotal NormTotal
No Reads
droKik1
GACGACTTCCTGCAGCGCCGTAATGTTGATCCATTGCGTTTGCCGCAACGGTAAGTCA----------------AATTA---CCAAAGTGG--AA------G-AAAAT-----A------------------------------------------TTCCTATA---ACC------------------------------------------------------------------------------------GAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTT--------------------------CTTTGCAGCTGCTATTTTCGTTTTCCCAGCACGGAGATTCGGATTGAGTTTGAGAGTTSizeHit CountTotal NormTotal
No Reads
droAna3
GACGACTTCTTGCAGCGCCGCAACGTCGATCCATTGCGGTTGCCCCAGCGGTAAGAAA------------------CT---------TGCCATTAAAATTTG-AAAT-----------------------------------------------------TAAA---TCT------------------------------------------------------------------------------AAAATTGTATTTGTGGTTTGTGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------------------------CTTTGCAGATGCTACTTCCGATTCCCCAGCACGGAGATTCGAATCGAGTTTGAGAGTTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACGGAGATTCGAATCGAGT.........2211.001000001
...GACTTCTTGCAGCGCCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.....................AACGTCGATCCATTGCGGTTGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...GACTTCTTGCAGCGCCGCAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
droBip1
GACGACTTCTTGCAGCGTCGCAATGTCGATCCGTTGCGGTTGCCCCAGCGGTAAGAAA------------------TC---------TCCCAAAAATAATTA-ATAT-----------------------------------------------------TAAA---ATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-AC------TC-CCCTCTTG--------------------------TATTGCAGTTGCTACTTCCGATTCCCCAGTACGGAGATTCGAATCGAGTTTGAGAGTTSizeHit CountTotal NormTotal
No Reads
dp5
C-------------------------TAATCCGTTACGTTAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTC--------------------------CCTTGCAGATGCTACTTTCGGTTCCCCAGCACGGAGATTCGGATAGAGTTTGAGAGCTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCACGGAGATTCGGATAGAGTT........2411.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGCTACTTTCGGTTCCCCA..............................2111.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCGGATAGAGTTTGAGAGC.2211.0010100000000
droPer2
C-------------------------TAATCCGTTACGTTAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTC--------------------------CCTTGCAGATGCTACTTTCGGTTCCCCAGCACGGAGATTCGGATAGAGTTTGAGAGCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
GATGATTTTCTGCAGCGTCGCAATGCGGATAATCTGCGTCTGCCGCAACGGTAAGAAG----------------GATTT---CATTTTTGA--TA------A-A----TTATG--------------------------------------------------------------------------------CATTC------------------------CACTCAATTACTC------A------------AC----CCTT----TC-------------TCTTTCTCT--------------------------------------------C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCTCTGTCTCTCTCT--T--TT-CATTTTGT--------------------------GTCTTCAGTTGTTATTTCCGCTTTCCCAGCACGGAAATTCGTATTGAGTTCGAGAGTTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
GATGATTTTCTGCAGCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
............CAGCGTCGCAATGCGGATAATCTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
droVir3
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGCAGCTGCTTCTTTCGATTTCCGAGCACCGAGATACGCATCGAATTCGAGAGCTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTTCTTTCGATTTCCGAGC............................2212.002000000000000000000000000000000000000000000000000000000000000002
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATACGCATCGAATTCGAGAGCT2511.001000000000100000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCATCGAATTCGAGAGCT1911.001000000000000000000000000000000000000000000000000000000000000100
droMoj3
GATGACTTTCTACAGCGACGCAATGTAGATCCACTGCGACTGCCCCAGCGGTAAATGC------------------TT---------TAACTAAA-------------TGATC--------------------------------------------------------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------ATT---AATTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCAATTCA--T--TT-TGCCTTTG--------------------------CTTTGCAGTTGCTTCTTTCGATTTCCGAGCACCGAGATACGCATCGAGTTCGAGAGTTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATACGCATCGAGTTCGAGA...2012.002100001
.......TTCTACAGCGACGCAATGTAGATCCAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACGCATCGAGTTCGAG....1811.001100000
droGri2
GATGATTTCCTGCAGCGACGCAATGTGGATCCACTGCGATTGCCGCAACGGTAAGTGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAATTCGCTTT---GCAATT--------------CTCCTCAATTCATGTTGAATCCATATCAATTTTGCAGCTGTTTCTTTCGATTTCCGAGCACCGAGATACGCATCGAGTTTGAGAGCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTTCTTTCGATTTCCGAGCAC..........................2411.00110
...GATTTCCTGCAGCGACGCAATGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110
...........GCAGCGACGCAATGTGGATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101

Generated: 05/17/2015 at 03:42 PM