ID:

dsi_490

 Coordinate:

2r:20251569-20251718 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.3 -3.0 -3.0 -2.8

Flybase annnotation

three_prime_UTR [2r_20251650_20251959_-]; exon [2r_20251650_20252626_-]

No Repeatable elements found

Sense Strand Reads

#######################################################################################################################-----------------------------------------------------------------------------------------------------------------------------------
CTATTTTAGTAATGTGTGTCTGTCTTGAAACCTAGTTTATACGAATGGAGAATCGCTGCGTTTATTTATGTATAGGTAACTTTGTAAATCAGATTTAATAAATTAAACCCATTTGAAGCGAACGCTCACAGGCTGCTCTTTATCAATAACCTCCATGTGGAAAGAATGGGAGAAAGACTACTACCTTTTCCTATTTTCAGGCAACATCCTCATCATTTTGCCCACGTACTACCACATTGTCAAGCTGAAC
********************************************************....((............(((...(((((.((......)).)))))....))).....))************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553485
Chicharo_3 day-old ovaries
 SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 M023
head
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
..................TCTGTCTTGAAACCTAGTTTATACGAA............................................................................................................................................................................................................. 27 0 1 4.00 4 3 0 0 0 0 1 0
....................................TTATACGAATGGAGAATCGCTGCGTT............................................................................................................................................................................................ 26 0 1 4.00 4 2 2 0 0 0 0 0
................................TAGTTTATACGAATGGAGAATCGC.................................................................................................................................................................................................. 24 0 1 3.00 3 0 0 3 0 0 0 0
..ATTTTAGTAATGTGTGTCTGTCTTGA.............................................................................................................................................................................................................................. 26 0 1 3.00 3 0 3 0 0 0 0 0
........................................................................................TCAGATTTAATAAATTAAACCCATTTGA...................................................................................................................................... 28 0 1 2.00 2 0 2 0 0 0 0 0
..................TCTGTCTTGAAACCTAGTTTATACGT.............................................................................................................................................................................................................. 26 1 1 1.00 1 0 0 0 1 0 0 0
.....................................TATACGAATGGAGAATCGCTGCGTT............................................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0 0
.............................................TGGAGAATCGCTGCGTT............................................................................................................................................................................................ 17 0 1 1.00 1 0 1 0 0 0 0 0
............TGTGTGTCTGTCTTGAAACCTAGTT..................................................................................................................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0
....TTTAGTAATGTGTGTCTGTCTTGAA............................................................................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0 0 0
.................GTCTGTCTTGAAACCTAGTTTATACGA.............................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0 0
....................TGTCTTGAAACCTAGTTTATACGAATGGA......................................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0 0 0
.....TTAGTAATGTGTGTCTGTCTTGAAACC.......................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................ATAAATTAAACCCATTTGAAGCGA................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0 0
................TGTCTGTCTTGAAACCTAGTTTATACGA.............................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0
.....TTAGTAATGTGTGTCTGTCTTGAAAC........................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
.TATTTTAGTAATGTGTGTCTGTCTTGAA............................................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0 0 0
...TTTTAGTAATGTGTGTCTGTCTTGAA............................................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0 0
........................TTGAAACCTAGTTTATACGAATGGAGA....................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
.TATTTTAGTAATGTGTGTCTGTCTTGA.............................................................................................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0 0
....................TGTCTTGAAACCTAGTTTATACGAT............................................................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0 0
........................................................................TAGGTAACTTTGTAAATCAGATT........................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0 0
..................TCTGTCTTGAAACCTAGTT..................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0 0 0
...................................TTTATACGAATGGAGAATCGCTGCGTT............................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................CTACCACATTGTCAAGCTG... 19 0 1 1.00 1 0 0 0 0 1 0 0
............TGTGTGTCTGTCTTGAAACCTAGTTTATA................................................................................................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0 0 0
............TTTTTGTCTGTCTTGAAACCTAGTT..................................................................................................................................................................................................................... 25 2 1 1.00 1 0 1 0 0 0 0 0
............................AACCTAGTTTATACGAATGGAGAATCG................................................................................................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0 0 0
............TGTGTGTCTGTCTTGAAACCTAGTTTA................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
.................GTCTGTCTTGAAACCTAGTTTATACGAA............................................................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0
........................................................TGCGTTTATTTATGTATAGGTAACTTT....................................................................................................................................................................... 27 0 1 1.00 1 0 0 0 1 0 0 0
.............................................TGGAGAATCGCTGCGTTTATTTATGTA.................................................................................................................................................................................. 27 0 1 1.00 1 0 0 0 1 0 0 0
.......................................TACGAATGGAGAATCGCTGC............................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 1
...........ATGGGTGTCTGGCTTGAA............................................................................................................................................................................................................................. 18 2 6 0.17 1 0 0 1 0 0 0 0
........................................................................................................ATACCCATTTGAAGCG.................................................................................................................................. 16 1 14 0.07 1 0 0 1 0 0 0 0

Anti-sense strand reads

GATAAAATCATTACACACAGACAGAACTTTGGATCAAATATGCTTACCTCTTAGCGACGCAAATAAATACATATCCATTGAAACATTTAGTCTAAATTATTTAATTTGGGTAAACTTCGCTTGCGAGTGTCCGACGAGAAATAGTTATTGGAGGTACACCTTTCTTACCCTCTTTCTGATGATGGAAAAGGATAAAAGTCCGTTGTAGGAGTAGTAAAACGGGTGCATGATGGTGTAACAGTTCGACTTG
**************************************************************************************************************************************....((............(((...(((((.((......)).)))))....))).....))******************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
.............................................ATCTCTTAGAGACGAAAATAAA....................................................................................................................................................................................... 22 3 2 0.50 1 1 0
........................................................................................................................................AGCAATAGTTATTGGA.................................................................................................. 16 1 2 0.50 1 1 0
..................................................................................................................................................................................................................................ATAATGGTGTAACAG......... 15 1 14 0.07 1 1 0
........................................................................................................................................AGCAATAGTTATTGGAA................................................................................................. 17 2 17 0.06 1 1 0
........................................................................................................................................AGAATTAGTTATTGGCG................................................................................................. 17 2 20 0.05 1 0 1
.......................................................................................................................................AAGCAATAGTTATTGGA.................................................................................................. 17 2 20 0.05 1 1 0
........................................................................................................................................AGAAATAGTTATCGG................................................................................................... 15 1 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2r:20251519-20251768 - dsi_490 C-TATT-TTAGTAATGTGT---GTCTGTC--T---------TGAAACCTAGTTTATACGA-----ATGGA-------GAATCGCTGC--GTTTATTTATGTATAGG---TAACTTTGTAAATCAGATTTAATAAATTAAAC-CCATTTGAAGCGAA-CGCTCACA---GGCTGC-----------------------------------------------------------------------------------------------------------------------TC------------------------------------------------------------------------TTTATCA-------------AT-AACCTCCATGTGGAAAGAATGGGAGAAAGACTA--------------------------------------------------------CTACC------------------T-TTTC--CTATTTTCAGGCAACATCCTCATCATTTTGCCCACGTACTACCACATTGTCAAGCTGAAC
droSec2 scaffold_9:3034915-3035164 - C-TATT-TTAGTAATGTGT---GTCTGTC--T---------TGAAACCTAGTTTATACGA-----ATGGA-------GAATCGCTGC--GTTTATTTATGTATAGG---TAACTTTGTAAATCAGATTTAATAAATTAAAC-CCATTTGAAGCGAA-CGCTCACA---GGCTGC-----------------------------------------------------------------------------------------------------------------------TC------------------------------------------------------------------------TTTATCA-------------AT-AACCTCCATGTGGAAAGAATGAGAGAAAGACTA--------------------------------------------------------CTACC------------------T-TTTC--CTATTTTCAGGCAACATCCTCATCATCTTGGCCACGTATTACCACATTGTCAAGCTGAAC
dm3 chr2R:19743345-19743596 - C-TATT-TTAGTAATGTGT---GTCTGTC--T---------TGAAACCTAGTTTATACGA-----ATGGG-------GAATCGCCGC--GTTTATTTATGTATAGG---TAACTTTGTAAATCAGATTTAATAAATTAAAC-CCATTTGAAGCGAAACGCTCACA---GGCTGC-----------------------------------------------------------------------------------------------------------------------TC------------------------------------------------------------------------TTTATCA-------------TT-AACCTCCATGTGGAAAGAATGAGAGAAAGTCTA--------------------------------------------------------CTACC------------------TTTTTC--CTATTTTCAGGCAACATCCTCATCATTTTACCCACCTACTACCACATTGTCAAGCTGAAC
droEre2 scaffold_4845:21120963-21121211 - C-TATT-TTAGTAATGAGT---GTCTGTC--T---------TGAAACCTAGTTTATACGA-----ATGGA-------GAGTCGCCGC--GTTTATTTATGTATAGG---TAACTTTGTAAATCAGATTTAATAAATTAAAC-CGATTTGAAGCAAA-CGCTAACA---GGCTGC-----------------------------------------------------------------------------------------------------------------------TC------------------------------------------------------------------------TTAATAA-------------AT-TTCCTTGAAGATTAGAAGATTAGAGAAAGACTA--------------------------------------------------------CTAC-------------------T-ATTC--TTACTTGCAGGCAACATCCTCATCATTTTGCCCACCTACTACCACATTGTCAAGCTGAAC
droYak3 2R:19726019-19726266 - C-TATT-TTAGTAATGTAT---GTCTGTC--T---------TGAAACCTAGTTCATACGA-----ATGGA-------GAATCG-CGC--GTTAATTTATGTATAGG---TAACTTTGTAAATCAGATTTAATAAATTAAAC-CCATTTGAAGCGAA-CGCTTGCA---GGCTGC-----------------------------------------------------------------------------------------------------------------------TC------------------------------------------------------------------------CAAGTCA-------------AC-TTACTTGAAGTTTAGAAGATTAGAGAAAGACTA--------------------------------------------------------CT----CC---------------G-TTTC--TTATTTTCAGGCAACATCCTCATCATTTTGCCCACCTACTACCACATTGTCAAGCTGAAC
droEug1 scf7180000409464:114924-115235 - C-TATT-TTATTAATGTGT---GTCTGTC--T---------TAAAACCTAGTTTATACGA-----ATGGA-------GCAATGCCGC--GTTTATTTATATATAGG---TAACTTTGTAAATCAGATTTAATAAATTAAAC-CCATTTGAAGCAAG-CACTTTT-------------TATACACATAAAGAGGGTCTGCGAAACCAGTTCATT-------------------------------------------------------------------------C-ATAGA------------TTTA---------------------------------------------------------------C-----------------A--TTCA---------------------TATTGTTATGTGATTCCTGACCAGATTTGAGGCGCTTGCCTATGCTAGGAGATGTAACTGGATA-------------------TATTTTA--CTTTTTTTAGGCAACATCCTCATCATTTTGCCCACCTTCTATCACTTGGTTAAACTAAAC
droBia1 scf7180000302143:1619061-1619336 + C-TATT-TTATTAATGTGT---GTCTGTC--T---------TAAAGCCTAGTTTATACGA-----ATGGA-------GGAGTGCCGC--GTTTATTTATGTATAGG---TAACTTTGTAAATCAGATTTAATAAACCAAAC-CCATTTGAAGCAAA-ACGTT---------------------------------------------------------------------------TT-----------------------------------------ACT------------AGATTTACGATTTACTAGAATGTAAGATTGTTAGTTCTCAAATATACCTGCCGATGCTTGATGAATAAGCTAATCG--------------------TTT------------------------------------------------------------------------------------------------------------TT---CTGCGCTTTTCAGGCAACATTCTCATCATTTTGCCCACCTACTACCACATTGTCAAGCTTAAC
droTak1 scf7180000415389:38669-38908 - C-TATTTTTATTAATGTGTGTCGTCTGTC--T---------TGAAACCTAGTTTATACGA-----ATGGA----GCAGGAGTGCCGC--GTTTATTTATGTATAGG---TAACTTTGTAAATCAGATTTAATAAACTAAAC-CCATTTGAAGCGAA-AGGTT---------------------------------------------------------------------------TT-----------------------------------------AGGAATA-CCCACTGA------------G-----------------------------------------TTTTAAGGCTCCCGCTCGTCA--------------------C--------------------------------------------------------------------------------------------------------------T-CTTC-TATCTTTGCAGGCAACATCCTCATCATTTTGCCCAGCTACTACCATCTGGTCAAGCTGAAC
droEle1 scf7180000491107:1924685-1924806 - C-TATT-TTATTAATGTGT---GTCTGTC--T---------TAAAACCTAGTTTATACGA-----ATGGA-------GGAGTGCCGC--GTTTATTTATGTATAGG---TAACTTTGTAAATCAGATTTAATAAATTAAAC-CCATTTGAAGCGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000777217:82142-82430 + C-TATT-TTATTAATGTGT---GTCTGTC--T---------TAAAACCTAGTTTATACGA-----ATGAA-------GGAGTGCCGC--GTTTATTTATGTATAGG---TAACTTTGTAAATCAGATTTAATAAATTAAAC-CCATTTAAAGCAAA-CACTATTA---AA----------ATAAG----------------------------TCTAATAGGTCTATTGGTTCTTACTT-----------------------------------------GTGTAATCTTTAAAC-----------TTA-----------------------------------------------------------TGTAA-ACGAGTATTTTTAATGAACC------------------------------------------------------------------------------------------TAAACCACTTCACTCGGCAT---CTCTGTTTTTCAGGCAACATCCTCATAATTTTGCCAACCTATTACCATATTGTTAAGCTAAAC
droFic1 scf7180000453858:1488225-1488488 - C-TATT-TTATTAATGTGT---GTCTATC--T---------TGAAACCTAGTTTATACGA-----ATGCA-------GGAGTGGCTC--GTTTATTTATATATAGG---TAACTTTGTAAATCAGATTTAATAAATTGAAC-CCATTTAAAGCAAG-GATTTTT-GTT---------------------------------------------ATCGATTTGAATC--------TACATATGTTCCGTAATATATATTATTAGCATAGATGAAAAGCTTTACT------------A----------------------------------------------------------------------------------------------GTTT------------------------------------------------------------------------------------------TAA---------------------ATTGCTTTGCAGGCAACATCCTCATCATTTTGCCCACTTACTACCACATCGTCAAGCTGAAC
droKik1 scf7180000302355:327819-328044 - C-TATTATTATTAATGTGTG-CGTCTGTC--C---------CAACACCCAG-----------------AA------GGGTTTGCCGAATGTTTATTTATGTATAGG---AAACTTTGTAAATCAGATTTAATAAATTAAAAACCACTA-CTCC---------------AGCAGCTTTTG-----ATCGAGAGGGT-TGC--CCCGAGTTAAAT-------------------------------------------------------------------------C-AAGGA------------TTTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT-TTTA--TGTCTTCCAGGCAACATTCTCATCGTTTTGCCCACCTACTACCACATCGTCAAGCTGAAC
droAna3 scaffold_13266:422749-422975 - A-TATT-TAATTTACGTGC---GTCTGTC--T---------TTAAACTTAGTTTGTACGA-----ATGTCGAGAGAGGAAATGTCGA--GTTTATTTATGTATAGG---TAACTTTGTAAATCAAATTTAATAAATTAAAC-CCTTTAAATGCAAA-CATCTAT---------C-----------------------------------------------------------------------------------------------------------------------TT------------------------------------------------------------------------TTAGT---------------------TACTAT-----------------AATTGTG--------------------------------------------------------CTGTT------------------TT---CTTTGTGTTTCAGGCAACATCCTGATTATTATGCCCACCTACTACCATATCGTTAAGCTAAAT
droBip1 scf7180000396730:1436651-1436899 - AATATT-TTATTAACGTCC---GTCTGTC--TTTAAAGT--TTAAACTTAGTTTATACGA-----ATGGA------GGGAATGTCGA--GTTTATTTATGTATAGG---TAACTTTGTAAATCAAATTTAATAAATTAAAC-CCATTAAATGCAAA-CACTTTTG---AACTA-------------------------TAAA------------------------------------------------------------------------------ACT------------AGTTTTATA-TTTA-------------------------------------------------------------------------------G-T--TTCT---------------------TAATATTT-----------------------------------------------------T----TTT-------------ATTT---CTTAATGTTTCAGGCAACATCCTTATTATATTGCCCACCTACTACCATATTGTTAAGCTTAAT
dp5 3:1655731-1655980 - T-AATT-GTATCATTGTGC---ATCTGTC--T---------TGTAACGTTCTTCATTTGATTTAATTGGA------GGAATAGCCGG--GTGTATTT--GTCTAGGAAACAGCATTGTAAATCAGATTTAATAAATCAACT-CTCTCTTATGGATA-CATCTAA-ATA---------------------------------------------TTTGATATGGCTA--------TGTTT-----------------------------------------AGGTATC-GCTAATCT------------A-----------------------------------------TTTT--------------------------------AATGAATC------------------------------------------------------------------------------------------TCC---------------------ATCTCTTTTCAGGCAACATATTGGTAATTTTGCCCACCTATTATCATATTGTTAAACTGAAC
droPer2 scaffold_2:1832737-1832986 - T-AATT-GTATCATTGTGC---ATCTGTC--T---------TGTAACGTTCTTCATTTGATTTAATTGGA------GGAATAGCCGG--GTGTATTT--GTCTAGGAAACAGCATTGTAAATCAGATTTAATAAATCAACT-CTCTCTTATGGATA-CATCTAA-ATA---------------------------------------------TTTGATATGGCTA--------TGTTT-----------------------------------------AGGTATC-GCTAATCT------------A-----------------------------------------TTTT--------------------------------AATGAATC------------------------------------------------------------------------------------------TCC---------------------ATCTCTTTTCAGGCAACATATTGGTAATTTTGCCCACCTATTATCATATTGTTAAACTGAAC
droWil2 scf2_1100000004514:1265611-1265666 + T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAGGAAACATTTTAATTATTTTGCCCAGTTATTATCATATTGTTAAATTGAAC
droVir3 scaffold_12875:11853079-11853134 - T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAGGAAACATATTGATCGTTTTACCGACTTTTTACCATATAGTAAAACTTAAC
droMoj3 scaffold_6496:15009888-15010120 + C-TGTT-TTAAAAATGTGT---GTGTTTCCGTTTGAACTGTTC--AATTTTTTGATACGA-----TTAGCGA--CAAGAAGAAAAGT--GTTTTATTATTT-TAAA---TTATTTTATAAATAAAAGTGAA--------------------ACGA------T----------GC--------------------------------------------------AGTTGAAATTTCTTT-----------------------------------------GTGTATT-AC----------------TTA-----------------------------------------------------------TTTTC------------------------ATC----------------AATATTA--------------------------------------------------------TTATT--T-------------ATAT---TTTATTTTTACAGGAAACATATTGATCATATTGCCGACTTATTATCATTTAGTTAAACTCAAC
droGri2 scaffold_15245:11701267-11701451 - T-TTTT-TTAATATGTCGT---TCCGAAT--T---------TTAAACTTGATTAGCAACA-----ATGGG-------GAA-------------------------------------TACATTTTATTTAATAAATTACAT-------------AA-CAAATGCA---GTCTAC-----------------------------------------------------------------------------------------------------------------------AC------------------------------------------------------------------------TTTTTCA-------------T-----TTCAATTTGTAAAA-------------------------------------------------------------------------TG-------------------TATGT--ATATTTTTTCAGGGAACATTTTGGTCCTTTTGCCGACGTACAATCATTTGGTTAAGCTGAAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
C-TATT-TTAGTAATGTGT---GTCTGTC--T---------TGAAACCTAGTTTATACGA-----ATGGA-------GAATCGCTGC--GTTTATTTATGTATAGG---TAACTTTGTAAATCAGATTTAATAAATTAAAC-CCATTTGAAGCGAA-CGCTCACA---GGCTGC-----------------------------------------------------------------------------------------------------------------------TC------------------------------------------------------------------------TTTATCA-------------AT-AACCTCCATGTGGAAAGAATGGGAGAAAGACTA--------------------------------------------------------CTACC------------------T-TTTC--CTATTTTCAGGCAACATCCTCATCATTTTGCCCACGTACTACCACATTGTCAAGCTGAACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................TCTGTC--T---------TGAAACCTAGTTTATACGA-----A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.00400000030010000000
....................................................TTATACGA-----ATGGA-------GAATCGCTGC--GTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.00400000022000000000
................................................TAGTTTATACGA-----ATGGA-------GAATCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.00300000000003000000
...ATT-TTAGTAATGTGT---GTCTGTC--T---------TGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00300000003000000000
.........................................................................................................................TCAGATTTAATAAATTAAAC-CCATTTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200000002000000000
.......................TCTGTC--T---------TGAAACCTAGTTTATACGT-----.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
.....................................................TATACGA-----ATGGA-------GAATCGCTGC--GTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
..................................................................TGGA-------GAATCGCTGC--GTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.00100000001000000000
..............TGTGT---GTCTGTC--T---------TGAAACCTAGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
.....T-TTAGTAATGTGT---GTCTGTC--T---------TGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
......................GTCTGTC--T---------TGAAACCTAGTTTATACGA-----.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
.........................TGTC--T---------TGAAACCTAGTTTATACGA-----ATGGA-------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
.......TTAGTAATGTGT---GTCTGTC--T---------TGAAACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
..................................................................................................................................ATAAATTAAAC-CCATTTGAAGCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000001000000000
..................T---GTCTGTC--T---------TGAAACCTAGTTTATACGA-----.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
.......TTAGTAATGTGT---GTCTGTC--T---------TGAAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
..TATT-TTAGTAATGTGT---GTCTGTC--T---------TGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
....TT-TTAGTAATGTGT---GTCTGTC--T---------TGAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
...............................T---------TGAAACCTAGTTTATACGA-----ATGGA-------GA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
..TATT-TTAGTAATGTGT---GTCTGTC--T---------TGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000001000000000
.........................TGTC--T---------TGAAACCTAGTTTATACGA-----T........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
......................................................................................................TAGG---TAACTTTGTAAATCAGATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000000000
.......................TCTGTC--T---------TGAAACCTAGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000001000000
...................................................TTTATACGA-----ATGGA-------GAATCGCTGC--GTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCACATTGTCAAGCTG...1911.00110000000000000000
..............TGTGT---GTCTGTC--T---------TGAAACCTAGTTTATA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
............................................AACCTAGTTTATACGA-----ATGGA-------GAATCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
..............TGTGT---GTCTGTC--T---------TGAAACCTAGTTTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
......................GTCTGTC--T---------TGAAACCTAGTTTATACGA-----A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
....................................................................................TGC--GTTTATTTATGTATAGG---TAACTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000100000000
..................................................................TGGA-------GAATCGCTGC--GTTTATTTATGTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000100000000
.......................................................TACGA-----ATGGA-------GAATCGCTGC--.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
droSec2
C-TATT-TTAGTAATGTGT---GTCTGTC--T---------TGAAACCTAGTTTATACGA-----ATGGA-------GAATCGCTGC--GTTTATTTATGTATAGG---TAACTTTGTAAATCAGATTTAATAAATTAAAC-CCATTTGAAGCGAA-CGCTCACA---GGCTGC-----------------------------------------------------------------------------------------------------------------------TC------------------------------------------------------------------------TTTATCA-------------AT-AACCTCCATGTGGAAAGAATGAGAGAAAGACTA--------------------------------------------------------CTACC------------------T-TTTC--CTATTTTCAGGCAACATCCTCATCATCTTGGCCACGTATTACCACATTGTCAAGCTGAACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................................................TAATAAATTAAAC-CCATTTGAAGCG................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010001
dm3
C-TATT-TTAGTAATGTGT---GTCTGTC--T---------TGAAACCTAGTTTATACGA-----ATGGG-------GAATCGCCGC--GTTTATTTATGTATAGG---TAACTTTGTAAATCAGATTTAATAAATTAAAC-CCATTTGAAGCGAAACGCTCACA---GGCTGC-----------------------------------------------------------------------------------------------------------------------TC------------------------------------------------------------------------TTTATCA-------------TT-AACCTCCATGTGGAAAGAATGAGAGAAAGTCTA--------------------------------------------------------CTACC------------------TTTTTC--CTATTTTCAGGCAACATCCTCATCATTTTACCCACCTACTACCACATTGTCAAGCTGAACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............AATGTGT---GTCTGTC--T---------TGAAACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2216.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002300000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TATAGG---TAACTTTGTAAATCAGATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TGAAACCTAGTTTATACGA-----ATGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TAATGTGT---GTCTGTC--T---------TGAAACCTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001000
............AATGTGT---GTCTGTC--T---------TGAAACCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................TATGTATAGG---TAACTTTGTAAATCAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...............................................................................................................................TTAATAAATTAAAC-CCATTTGAAGCG................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TTAGTAATGTGT---GTCTGTC--T---------TGAAACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................ATTTAATAAATTAAAC-CCATTTGAAGCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................2913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................TC--T---------TGAAACCTAGTTTATACGA-----ATGGA-------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................TTTAATAAATTAAAC-CCATTTGAAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TTATGTATAGG---TAACTTTGTAAATCAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................CGC--GTTTATTTATGTATAGG---.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................ATAGG---TAACTTTGTAAATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................AATAAATTAAAC-CCATTTGAAGCG................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
..............TGTGT---GTCTGTC--T---------TGAAACCTAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TGTGT---GTCTGTC--T---------TGAAACCTAGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ATT-TTAGTAATGTGT---GTCTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...................................................................................................GTATAGG---TAACTTTGTAAATCAGATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................TGTATAGG---TAACTTTGTAAATCAGATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................TCGCCGC--GTTTATTTATGTATAGG---T............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................ATAGG---TAACTTTGTAAATCAGATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................ATAAATTAAAC-CCATTTGAAGCG................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTACTACCACATTGTCAAGCTGA..2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................TATACGA-----ATGGG-------GAATCGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................ATTTATGTATAGG---TAACTTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TGTGT---GTCTGTC--T---------TGAAACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................ATGTATAGG---TAACTTTGTAAATCAGAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................ATCGCCGC--GTTTATTTATGTATA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................TATTTATGTATAGG---TAACTTTGTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................ATGTATAGG---TAACTTTGTAAATCAGATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..TATT-TTAGTAATGTGT---GTCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................AATAAATTAAAC-CCATTTGAAGCGA...............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCACATTGTCAAGCTGAAC2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................CCGC--GTTTATTTATGTATAGG---TAACTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TAGTAATGTGT---GTCTGTC--T---------TGAAACCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TGAAACCTAGTTTATACGA-----AT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TTTATTTATGTATAGG---TAACTTTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................AC-CCATTTGAAGCGAAACGT..........................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
..................T---GTCTGTC--T---------TGAAACCTAGTTTATACGA-----.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............ATGTGT---GTCTGTC--T---------TGAAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
................................................................................TCGCCGC--GTTTATTTATGTATAGG---.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ATT-TTAGTAATGTGT---GTCTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
......................GTCTGTC--T---------TGAAACCTAGTTTATACGA-----A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
......................................................................................................TAGG---TAACTTTGTAAATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................ATTTATGTATAGG---TAACTTTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................TAAAC-CCATTTGAAGCGAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
...............GTGT---GTCTGTC--T---------TGAAACCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..........................................................................................TTTATTTATGTATAGG---TAACTTTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AATGTGT---GTCTGTC--T---------TGAAACCTAGTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAAAGAATGAGAGAAAG.......................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....T-TTAGTAATGTGT---GTCTGTC--T---------TGAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
...........TAATGTGT---GTCTGTC--T---------TGAAACCTAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................ATGGG-------GAATCGCCGC--GTTTATTTATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................AAC-CCATTTGAAGCGAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
....................................................................................................................................AAATTAAAC-CCATTTGAAGCG................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................TGAGAGAAAGTCTA--------------------------------------------------------CTACC------------------TTTTC...............................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................CCGC--GTTTATTTATGTATAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................TTATTTATGTATAGG---TAACTTTGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............................................................................................TTATGTATAGG---TAACTTTGTAAATCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTC--CTATTTTCAGGCAACATCCTCATCAT..................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TAATGTGT---GTCTGTC--T---------TGAAACCTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................TTAAAC-CCATTTGAAGCGAAAAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
droEre2
C-TATT-TTAGTAATGAGT---GTCTGTC--T---------TGAAACCTAGTTTATACGA-----ATGGA-------GAGTCGCCGC--GTTTATTTATGTATAGG---TAACTTTGTAAATCAGATTTAATAAATTAAAC-CGATTTGAAGCAAA-CGCTAACA---GGCTGC-----------------------------------------------------------------------------------------------------------------------TC------------------------------------------------------------------------TTAATAA-------------AT-TTCCTTGAAGATTAGAAGATTAGAGAAAGACTA--------------------------------------------------------CTAC-------------------T-ATTC--TTACTTGCAGGCAACATCCTCATCATTTTGCCCACCTACTACCACATTGTCAAGCTGAACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
C-TATT-TTAGTAATGAGT---GTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
.............ATGAGT---GTCTGTC--T---------TGAAACCTAGTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
..............TGAGT---GTCTGTC--T---------TGAAACCTAGTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
droYak3
C-TATT-TTAGTAATGTAT---GTCTGTC--T---------TGAAACCTAGTTCATACGA-----ATGGA-------GAATCG-CGC--GTTAATTTATGTATAGG---TAACTTTGTAAATCAGATTTAATAAATTAAAC-CCATTTGAAGCGAA-CGCTTGCA---GGCTGC-----------------------------------------------------------------------------------------------------------------------TC------------------------------------------------------------------------CAAGTCA-------------AC-TTACTTGAAGTTTAGAAGATTAGAGAAAGACTA--------------------------------------------------------CT----CC---------------G-TTTC--TTATTTTCAGGCAACATCCTCATCATTTTGCCCACCTACTACCACATTGTCAAGCTGAACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
C-TATT-TTATTAATGTGT---GTCTGTC--T---------TAAAACCTAGTTTATACGA-----ATGGA-------GCAATGCCGC--GTTTATTTATATATAGG---TAACTTTGTAAATCAGATTTAATAAATTAAAC-CCATTTGAAGCAAG-CACTTTT-------------TATACACATAAAGAGGGTCTGCGAAACCAGTTCATT-------------------------------------------------------------------------C-ATAGA------------TTTA---------------------------------------------------------------C-----------------A--TTCA---------------------TATTGTTATGTGATTCCTGACCAGATTTGAGGCGCTTGCCTATGCTAGGAGATGTAACTGGATA-------------------TATTTTA--CTTTTTTTAGGCAACATCCTCATCATTTTGCCCACCTTCTATCACTTGGTTAAACTAAACSizeHit CountTotal NormTotal
No Reads
droBia1
C-TATT-TTATTAATGTGT---GTCTGTC--T---------TAAAGCCTAGTTTATACGA-----ATGGA-------GGAGTGCCGC--GTTTATTTATGTATAGG---TAACTTTGTAAATCAGATTTAATAAACCAAAC-CCATTTGAAGCAAA-ACGTT---------------------------------------------------------------------------TT-----------------------------------------ACT------------AGATTTACGATTTACTAGAATGTAAGATTGTTAGTTCTCAAATATACCTGCCGATGCTTGATGAATAAGCTAATCG--------------------TTT------------------------------------------------------------------------------------------------------------TT---CTGCGCTTTTCAGGCAACATTCTCATCATTTTGCCCACCTACTACCACATTGTCAAGCTTAACSizeHit CountTotal NormTotal
No Reads
droTak1
C-TATTTTTATTAATGTGTGTCGTCTGTC--T---------TGAAACCTAGTTTATACGA-----ATGGA----GCAGGAGTGCCGC--GTTTATTTATGTATAGG---TAACTTTGTAAATCAGATTTAATAAACTAAAC-CCATTTGAAGCGAA-AGGTT---------------------------------------------------------------------------TT-----------------------------------------AGGAATA-CCCACTGA------------G-----------------------------------------TTTTAAGGCTCCCGCTCGTCA--------------------C--------------------------------------------------------------------------------------------------------------T-CTTC-TATCTTTGCAGGCAACATCCTCATCATTTTGCCCAGCTACTACCATCTGGTCAAGCTGAACSizeHit CountTotal NormTotal
No Reads
droEle1
C-TATT-TTATTAATGTGT---GTCTGTC--T---------TAAAACCTAGTTTATACGA-----ATGGA-------GGAGTGCCGC--GTTTATTTATGTATAGG---TAACTTTGTAAATCAGATTTAATAAATTAAAC-CCATTTGAAGCGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
C-TATT-TTATTAATGTGT---GTCTGTC--T---------TAAAACCTAGTTTATACGA-----ATGAA-------GGAGTGCCGC--GTTTATTTATGTATAGG---TAACTTTGTAAATCAGATTTAATAAATTAAAC-CCATTTAAAGCAAA-CACTATTA---AA----------ATAAG----------------------------TCTAATAGGTCTATTGGTTCTTACTT-----------------------------------------GTGTAATCTTTAAAC-----------TTA-----------------------------------------------------------TGTAA-ACGAGTATTTTTAATGAACC------------------------------------------------------------------------------------------TAAACCACTTCACTCGGCAT---CTCTGTTTTTCAGGCAACATCCTCATAATTTTGCCAACCTATTACCATATTGTTAAGCTAAACSizeHit CountTotal NormTotal
No Reads
droFic1
C-TATT-TTATTAATGTGT---GTCTATC--T---------TGAAACCTAGTTTATACGA-----ATGCA-------GGAGTGGCTC--GTTTATTTATATATAGG---TAACTTTGTAAATCAGATTTAATAAATTGAAC-CCATTTAAAGCAAG-GATTTTT-GTT---------------------------------------------ATCGATTTGAATC--------TACATATGTTCCGTAATATATATTATTAGCATAGATGAAAAGCTTTACT------------A----------------------------------------------------------------------------------------------GTTT------------------------------------------------------------------------------------------TAA---------------------ATTGCTTTGCAGGCAACATCCTCATCATTTTGCCCACTTACTACCACATCGTCAAGCTGAACSizeHit CountTotal NormTotal
No Reads
droKik1
C-TATTATTATTAATGTGTG-CGTCTGTC--C---------CAACACCCAG-----------------AA------GGGTTTGCCGAATGTTTATTTATGTATAGG---AAACTTTGTAAATCAGATTTAATAAATTAAAAACCACTA-CTCC---------------AGCAGCTTTTG-----ATCGAGAGGGT-TGC--CCCGAGTTAAAT-------------------------------------------------------------------------C-AAGGA------------TTTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CT-TTTA--TGTCTTCCAGGCAACATTCTCATCGTTTTGCCCACCTACTACCACATCGTCAAGCTGAACSizeHit CountTotal NormTotal
No Reads
droAna3
A-TATT-TAATTTACGTGC---GTCTGTC--T---------TTAAACTTAGTTTGTACGA-----ATGTCGAGAGAGGAAATGTCGA--GTTTATTTATGTATAGG---TAACTTTGTAAATCAAATTTAATAAATTAAAC-CCTTTAAATGCAAA-CATCTAT---------C-----------------------------------------------------------------------------------------------------------------------TT------------------------------------------------------------------------TTAGT---------------------TACTAT-----------------AATTGTG--------------------------------------------------------CTGTT------------------TT---CTTTGTGTTTCAGGCAACATCCTGATTATTATGCCCACCTACTACCATATCGTTAAGCTAAATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................GTCGAGAGAGGAAATGTCGA--.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
droBip1
AATATT-TTATTAACGTCC---GTCTGTC--TTTAAAGT--TTAAACTTAGTTTATACGA-----ATGGA------GGGAATGTCGA--GTTTATTTATGTATAGG---TAACTTTGTAAATCAAATTTAATAAATTAAAC-CCATTAAATGCAAA-CACTTTTG---AACTA-------------------------TAAA------------------------------------------------------------------------------ACT------------AGTTTTATA-TTTA-------------------------------------------------------------------------------G-T--TTCT---------------------TAATATTT-----------------------------------------------------T----TTT-------------ATTT---CTTAATGTTTCAGGCAACATCCTTATTATATTGCCCACCTACTACCATATTGTTAAGCTTAATSizeHit CountTotal NormTotal
No Reads
dp5
T-AATT-GTATCATTGTGC---ATCTGTC--T---------TGTAACGTTCTTCATTTGATTTAATTGGA------GGAATAGCCGG--GTGTATTT--GTCTAGGAAACAGCATTGTAAATCAGATTTAATAAATCAACT-CTCTCTTATGGATA-CATCTAA-ATA---------------------------------------------TTTGATATGGCTA--------TGTTT-----------------------------------------AGGTATC-GCTAATCT------------A-----------------------------------------TTTT--------------------------------AATGAATC------------------------------------------------------------------------------------------TCC---------------------ATCTCTTTTCAGGCAACATATTGGTAATTTTGCCCACCTATTATCATATTGTTAAACTGAACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................AATCAACT-CTCTCTTATGGATA-CATCT........................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
...............................................................AATTGGA------GGAATAGCCGG--GT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................................................................................................................GATTTAATAAATCAACT-CTCTCTTATG..................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
.....................................................................................................................................AATCAACT-CTCTCTTATGGATA-AC...........................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
.......GTATCATTGTGC---ATCTGTC--T---------T................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
droPer2
T-AATT-GTATCATTGTGC---ATCTGTC--T---------TGTAACGTTCTTCATTTGATTTAATTGGA------GGAATAGCCGG--GTGTATTT--GTCTAGGAAACAGCATTGTAAATCAGATTTAATAAATCAACT-CTCTCTTATGGATA-CATCTAA-ATA---------------------------------------------TTTGATATGGCTA--------TGTTT-----------------------------------------AGGTATC-GCTAATCT------------A-----------------------------------------TTTT--------------------------------AATGAATC------------------------------------------------------------------------------------------TCC---------------------ATCTCTTTTCAGGCAACATATTGGTAATTTTGCCCACCTATTATCATATTGTTAAACTGAACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..............................................................................AATAGCCGG--GTGTATTT--GTCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
droWil2
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAGGAAACATTTTAATTATTTTGCCCAGTTATTATCATATTGTTAAATTGAACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCAGGAAACATATTGATCGTTTTACCGACTTTTTACCATATAGTAAAACTTAACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCGACTTTTTACCATATAGTAAAACT....2813.003000000000000000000000000000030000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATATTGATCGTTTTACCGACTTTT.....................2611.001000000000000000000000000000000010000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATATTGATCGTTTTACCGACTTTT.....................2511.001000000000000000000000000000000100000000000000000000000000000000
droMoj3
C-TGTT-TTAAAAATGTGT---GTGTTTCCGTTTGAACTGTTC--AATTTTTTGATACGA-----TTAGCGA--CAAGAAGAAAAGT--GTTTTATTATTT-TAAA---TTATTTTATAAATAAAAGTGAA--------------------ACGA------T----------GC--------------------------------------------------AGTTGAAATTTCTTT-----------------------------------------GTGTATT-AC----------------TTA-----------------------------------------------------------TTTTC------------------------ATC----------------AATATTA--------------------------------------------------------TTATT--T-------------ATAT---TTTATTTTTACAGGAAACATATTGATCATATTGCCGACTTATTATCATTTAGTTAAACTCAACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................ATAAATAAAAGTGAA--------------------ACGA------T----------GC--------------------------------------------------AG........................................................................................................................................................................................................................................................................................................................................................2411.001100000
droGri2
T-TTTT-TTAATATGTCGT---TCCGAAT--T---------TTAAACTTGATTAGCAACA-----ATGGG-------GAA-------------------------------------TACATTTTATTTAATAAATTACAT-------------AA-CAAATGCA---GTCTAC-----------------------------------------------------------------------------------------------------------------------AC------------------------------------------------------------------------TTTTTCA-------------T-----TTCAATTTGTAAAA-------------------------------------------------------------------------TG-------------------TATGT--ATATTTTTTCAGGGAACATTTTGGTCCTTTTGCCGACGTACAATCATTTGGTTAAGCTGAACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 07:29 PM