ID:

dsi_4814

 Coordinate:

2l:7435544-7435693 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-32.2 -32.1 -31.8

Flybase annnotation

exon [2l_7434524_7435543_+]; CDS [2l_7434524_7435543_+]; intron [2l_7435544_7437622_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CCAAGCAAATGGTGGATGACGTGTTCCGCTTCCTAAACGATGAACCCGATGTGAGTGGTCCTCTGGGGCCGAATGTCAAAGAGAAGTCTATGATGTTCGAGCAGGCATTGCGCCTGCGCAGAGATGTGCCCACCAAGCTCCTTTCCCGCCCGGTCAACTATTACGAGGCGGCGCCTCGGAAGATTGTCAACCAGACCCGCCTCTAGTAGCGAATCAGGCTGGGACTGGAACAGATCCGAACAAACCTAGA
************************************************************************************.((((.(((((.((..((((((.....))))))(((......)))..(((..((.........))..))).........((((((...))))))...)).)))))...))))****************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 M023
head
 M025
embryo
 M053
female body
 GSM343915
embryo
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 O001
Testis
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
 SRR1275483
Male prepupae		 O002
Head
 SRR1275487
Male larvae
..............................................................................................................................................TTCCCGTCCGATCAACTGT......................................................................................... 19 3 9 50.22 452 242 174 18 5 0 0 6 4 0 1 0 0 1 1
.............................................................................................................................................TTTCCCGTCCGATCAACTGT......................................................................................... 20 3 5 21.00 105 51 47 6 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TTTCCCGTCCGATCAACT........................................................................................... 18 2 3 4.33 13 7 5 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................CGGAAGATTGTCAACCAGAC...................................................... 20 0 1 4.00 4 0 0 4 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................CCTTTCCCGTCCGATCAACTGT......................................................................................... 22 3 1 3.00 3 1 0 2 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................CGTTTCCCGTCCGATCAACT........................................................................................... 20 3 7 2.57 18 5 7 1 3 0 0 1 0 0 0 0 1 0 0
.............................................................................................................................................................................................................GTAGCGAATCAGGCTGGGACT........................ 21 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................CTCTAGTAGCGAATCAGGCTGGGACT........................ 26 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GAACAGATCCGAACAAACCTAGA 23 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GGCTGGGACTGGAACAGATC.............. 20 0 1 2.00 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TTCCCGCCCGATCAACTGT......................................................................................... 19 2 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................................AGTCTATGATGTTCGAGC.................................................................................................................................................... 18 0 1 2.00 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................CTATGATGTTCGAGCAGGC................................................................................................................................................ 19 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................GTTTCCCGTCCGATCAACT........................................................................................... 19 3 18 1.72 31 9 9 0 3 0 0 5 1 2 0 0 0 2 0
...................................................................................................................................................................................................................................GAACAGATCCGAACAAACCT... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................GTAGCGCATCAGTCTGGG........................... 18 2 1 1.00 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................................................................................TATCGAATTAGGCTGGGACTGC...................... 22 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
..............GATGACGTGTTCCGCTTC.......................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..........GGTGGATGACGTGTTCCGCTTCCTAAAC.................................................................................................................................................................................................................... 28 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................CTTTCCCGTCCGATCAACTGT......................................................................................... 21 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................CGGAAGATTGTCAACCAGACCC.................................................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GAATCAGGCTGGGACTGGAACAGATCC............. 27 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................CTCGGAAGATTGTCAACCAGACCC.................................................... 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................AGTAGCGAATCAGGCTGGGACT........................ 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................ATCAGGCTGGGACTGGAACAGATC.............. 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................CAAAGAGAAGTCTATGATGTT......................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................AAACGATGAACCCGATGTGAGT.................................................................................................................................................................................................. 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TTTCCCGCCCGATCAACTGT......................................................................................... 20 2 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................AGCGAATCAGGCTGGGACTG....................... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................GAAGATTGTCAACCAGACCCG................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................CTCGGAAGATTGTCAACC.......................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................CTCTAGTAGCAAATCAGGCTGGGACT........................ 26 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................CGATCAAGTATTACGACGCG................................................................................ 20 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................AACGATGAACCCGATGTGAG................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................TATTACGAGGCGGCGCCT.......................................................................... 18 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................CTGGAACAGATCCGAACAAACCT... 23 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................................CGAATCAGGCTGGGACTGGAAC................... 22 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
...........................................................................................................................................................................CGCCTCGGAAGATTGTCAACC.......................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CTGGGACTGGAACAGATCC............. 19 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................GCGTCCAGTATCGAATCAGG................................ 20 3 1 1.00 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0
............................................................................................................................................GTTTCCCGTCCGGTCAACTGT......................................................................................... 21 3 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..........................................AACCCGATGTGAGTGGTC.............................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................GAACAGATCCGAACAAACCTAGG 23 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................GCTCCTTTCCCGCCCGGTCA.............................................................................................. 20 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.CAAGCAAATGGTGGATGA....................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................................................................GCTGGGACTGGAACAGATCC............. 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................GGCGCCTCGGAAGATTGTCAA............................................................ 21 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0
...............................................................................AGAGAAGTCTATGATGTTCGAGCA................................................................................................................................................... 24 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................................GAAGATTGTCAACCAGACCCGCCT................................................ 24 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TTCCCGTCCGATCAACTG.......................................................................................... 18 3 20 0.85 17 7 3 1 1 0 0 2 1 0 0 0 0 1 1
..............................................................................................................................................TTCCCGTCCGATCAACT........................................................................................... 17 2 4 0.75 3 0 0 0 0 0 0 1 0 0 0 1 1 0 0
.............................................................................................................................................................GTATTACGACGCGGCGCGT.......................................................................... 19 3 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................AGTATTACGACGCGGCG............................................................................. 17 2 3 0.33 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
..............................................................................................................................................TTCCCGTCCGATCAACTAGT........................................................................................ 20 3 3 0.33 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TTCCCGTCCGATCAACTATA........................................................................................ 20 3 3 0.33 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................GTTTCCCGTCCGGTCAAC............................................................................................ 18 2 3 0.33 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
....................................................................CCGAATGTCAAAGTGAAG.................................................................................................................................................................... 18 1 10 0.30 3 0 2 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................AGTATTACGACGCGGC.............................................................................. 16 2 15 0.27 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0
..............................................................................................................................................TTCCCGCCCGATCAACTGTA........................................................................................ 20 3 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.........................................................................................................................................................................GGCGCCTCGGAAGCT.................................................................. 15 1 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
............................................................................................................................................................AGTATTACGACGCGGCGTC........................................................................... 19 3 5 0.20 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................GTAGCGCATCAGTCTGGGG.......................... 19 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................TTCCCGTCCGATCAACTGTT........................................................................................ 20 3 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
.............................................................................................................................................TTTCCCGTCCGATCAACTG.......................................................................................... 19 3 20 0.15 3 1 0 0 1 0 0 0 1 0 0 0 0 0 0
..........................................................................................................................................................................................................................CTGGGACTGGAACACA................ 16 1 7 0.14 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
..............................................................................................................................................TTCCCGTCCGTTCAACTGT......................................................................................... 19 3 20 0.10 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................CTGATCCGAACAACCCCAG. 19 3 13 0.08 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0
........................TCCACGTCGTAAACGATGA............................................................................................................................................................................................................... 19 3 14 0.07 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
...........................................................................................................................................................................................................TGGTAGCGCATCAGTCTGG............................ 19 3 14 0.07 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................TTTCCCGTCCGATCAAC............................................................................................ 17 2 16 0.06 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CTGGGACTGGAACAC................. 15 1 18 0.06 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
......................................................................GAATGTCAAAGCGAA..................................................................................................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................................................................................................................GCCTTTCACGCCCGGT................................................................................................ 16 2 20 0.05 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0

Anti-sense strand reads

GGTTCGTTTACCACCTACTGCACAAGGCGAAGGATTTGCTACTTGGGCTACACTCACCAGGAGACCCCGGCTTACAGTTTCTCTTCAGATACTACAAGCTCGTCCGTAACGCGGACGCGTCTCTACACGGGTGGTTCGAGGAAAGGGCGGGCCAGTTGATAATGCTCCGCCGCGGAGCCTTCTAACAGTTGGTCTGGGCGGAGATCATCGCTTAGTCCGACCCTGACCTTGTCTAGGCTTGTTTGGATCT
******************************************************.((((.(((((.((..((((((.....))))))(((......)))..(((..((.........))..))).........((((((...))))))...)).)))))...))))************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 O001
Testis
 O002
Head
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 SRR618934
dsim w501 ovaries
........................................................................................ATACTGCGAGCTTGTCCGTA.............................................................................................................................................. 20 3 3 1.00 3 2 0 0 1 0 0
......................CAAGGCGAAGGATTTGCTACT............................................................................................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0 0
........................................................................................................................................CGAGGAAAGGGCGGGCCAGTT............................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0
.........................................................................................TACTGCGAGCTTGTCCGTA.............................................................................................................................................. 19 3 17 0.59 10 5 0 0 4 1 0
...........................................................................................................................................................................................................ATGATCGCTTAGGCCGA.............................. 17 2 3 0.33 1 1 0 0 0 0 0
........................................................................................ATACTGCGAGCTTGTCCGT............................................................................................................................................... 19 3 10 0.30 3 2 0 0 1 0 0
......................................CTACTTGGGCTGCACTTA.................................................................................................................................................................................................. 18 2 6 0.17 1 0 0 0 1 0 0
..............................................................................................................GCGGACGCGTTTCTA............................................................................................................................. 15 1 14 0.07 1 0 0 0 0 0 1
..........................................................................................................................................................................................................................................AGGCTTGTTTCGATCG 16 2 20 0.05 1 0 0 0 0 1 0
...............................................................ACCACGGCTGACAGTTT.......................................................................................................................................................................... 17 2 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:7435494-7435743 + dsi_4814 CCAAGCAAATGGTGGATGACGTGTTCCGCTTCCTAAACGATGAACCCGATGTGAGTGGTCCTCTGGGGCCGAATGTCAAAGAGAAGTCTATGATGTTCGAGCAGGCATTGCGCCTGCGCAGAGATGTGCCCACCAAGCTCCTTTCCCGCCCGGTCAACTATTACGAGGCGGCGCCTCGGAAGATTGTCAACCAGACCCGCCTCTAGTAGCGAATCA-GGCTGGGACT--GGAA-CAGATCCGAACAAACCTAG---A
droSec2 scaffold_3:3197445-3197693 + dse_1166 CCAAGCAAATGGTGGATGACGTGTTCCGCTTCCTAAACGATGAACCCGATGTGAGTGGTCCTCTGGGGCCGAATGTCAAAGAGAAGTCTATGATGTTCGAGCAGGCATTGCGCCTGCGCAGAGACGTGCCCACCAAGCTCCTTTCCCGCCCGGTCAACTATTACGAGGCGGCGCCTCGGAAGATTGTCAACCAGACCCGCCTCTAGTAGCGAATCA-GGCTGGGACT--GGAA-CAGATCCGAACAAAC-TAG---A
dm3 chr2L:7683700-7683948 + CCAAGCAAATGGTGGATGACGTGTTCCGCTTCCTAAACGATGAACCCGATGTGAGTGGTCCTCTGGGGCCGAATGTCAAAGAGAAGTCTATGATGTTCGAGCAGGCATTGCGTCTGCGTAGAGATGTGCCCACCAAGCTCCTTTCCCGCCCGGTCAACTATTACGAGGCGGCGCCTAGGAAGATTGTCAACCAGACCCGCCTCTAGTAGCGAATCA-GGCTGGGACT--GGAA-AAGATCCGAACAAAC-TAG---A
droEre2 scaffold_4929:16612342-16612590 + CCAAGCAAATGGTGGATGACGTGTTCCGCTTCCTGAACGATGAACCCGATGTGAGTGGTCCTCTGGGGCCGAATGTCAAAGAGAAGTCTATGATGTTCGAGCAGGCATTGCGCCTGCGCAGAGATGTGCCCACCAAGCTCCTTTCCCGCCCGGTCAACTATTATGAGGCGGCGCCTCGGAAGATTGTCAACCAGACCCGCCTCTAGTAGCGAATCA-GGCTGGGACT--GGAA-CAGATCCGAACAAAC-TAG---A
droYak3 2L:5208271-5208519 - dya_235 CCAAGCAAATGGTGGACGATGTGTTCCGCTTCCTAAACGACGAACCCGATGTGAGTGGTCCTCTGGGGCCGAATGTCAAAGAGAAGTCTATGATGTTCGAGCAGGCACTGCGCCTGCGCAGAGATGTGCCCACCAAGCTCCTTTCCCGCCCGGTCAACTATTATGAGGCGGCGCCTCGGAAGATTGTCAACCAGACCCGCCTCTAGTAGCGAATCA-GGCTGGGACT--GGAA-GAGATCCGAACAAAC-TAG---A
droEug1 scf7180000408936:204393-204641 + CCAAGCAGATGGTAGACGACGTCTTCCGGTTCCTTAATGACGAGCCCGATGTGAGTGGTCCCCTGGGGCCGAATGTCAAAGAGAAGTCTATGATGTTCGAGCAGGTGCTGCGCCTGCGCAAAGATGTGCCCACGAAACTCCTGTCCCGCCCGGTCAACTACTATGAGGCGGCGCCTCGGAAGATTGTCAACCAGACCCGCCTCTAGTAGCAGACCA-GGCTGGGACT--GGAG-CAGCCCTGAACAAAC-TAG---A
droBia1 scf7180000302422:9414218-9414466 + CCAAACAAATGGTGGACGACGTGTTCCGGTTCCTCAATGACGAACCCGATGTGAGTGGTCCTCTGGGGCCGAATGTCAAAGAGAAGTCTATGATGTTCGAGCAGGCGCTGCGCCTGCGCAAAGATGTGCCTACCAAGCTCCTGTCCCGCCCGGTGAACTACTATGAGGCGGCGCCTCGTAAGATTGTCAACCAGACCCGTCTCTAGTAGGGAATCA-GGCTGGGACT--GGAG-CAGACCCGAACAAAC-TAG---A
droTak1 scf7180000415278:174852-175100 + CCAAGCAGATGGTGGACGACGTGTTCCGGTTCCTCAACGACGAACCCGACGTGAGTGGTCCCCTGGGGCCGAATGTCAAAGAGAAGTCTATGATGTTCGAGCAGGCGCTGCGCCTGCGCAGGGATGTGCCAACCAAACTCCTCTCCCGCCCGGTCAACTACTATGAGGCTGCGCCTCGGAAGATTGTCAACCAGACGCGTCTCTAGTAGCGAATCG-GGATGGGACT--GGAG-CAGCCCCGAACAAAC-TAG---A
droEle1 scf7180000491028:1340276-1340526 - CCAAACAGATGGTAGACGATGTGTTCCGCTTCCTCAACGACGAACCCGATGTGAGTGGTCCTCTGGGGCCGAATGTCAAAGAGAAGTCTCTGATGTTCGAGCAGGCACTGCGCCTGCGCAAAGATGTACCCACCAAGCTCCTGTCCCGCCCGGTCAACTATTATGAGGCGGCGCCTCGGAAGATTGTCAACCAGACCCGCCTCTAGTAGCGGATCA-GGCTGGGACTTGGGAA-CAGCCCCGAACAAAC-TAG---A
droRho1 scf7180000779919:1004-1252 - CCAAGCAGATGGTGGACGACGTGTTCCGGTTTCTCAACGACGAGCCCGACGTGAGTGGTCCCTTGGGGCCGAATGTCAAAGAGAAGTCTCTGATGTTTGAGGAGGCGTTGCGCATGCGCAGAGATGTCCCTACCAAGCTCCTGTCCCGCCCGGTCAACTATTATGAGGCGGCGCCTCGGAAGATTGTCAACCAGACCCGCCTCTAGTAGCGAATCA-GGCTGGGACT--GGAA-CAGCCCCGAACAAAC-TAG---A
droFic1 scf7180000454115:460725-460976 + CCAAGCAGATGGTGGACGACGTGTTCCGCTTCCTCAACGACGAACCCGATGTGAGTGGTCCCCTGGGGCCGAATGTCAAAGAGAAGTCTCTGATTTTCGAGCAGGCGTTGCGCATGCGCAGGGATGTGCCCACCAAGCTCCTCTCCCGCCCGGTCAACTATTACGAGGCGGCGCCGCGGAAGATCGTCAACCAGACCCGCCTCTAGTAGCGGATCG-GGCTGGGACT--GGAA-CTGCCCCGAACAAAA-TAGTAAA
droKik1 scf7180000302389:157110-157359 + CCAAGCAGATGGTCGACGAGATGTTCCGCTTCCTCAACGACGAGCCCGACGTGAGTGGTCCCCTGGGGCCGAATGTCAAAGAGAAGTCTCTGATGTTCGAGCAGGCGCTGCTCATGCGCCGAGATGTGCCCACAAAGCTCCTCTCCCGCCCGGTCAACTATTACGAGGCGGCGCCTCGAAAGATTGTCAACCAGACCCGCCTCTAGTAGCGGACCG-GGCTGGGACT--GGAACTGGCCCCGAACAAAC-TAG---A
droAna3 scaffold_12916:15631953-15632194 + dan_746 CCAAGCAGATGGTCGACGATGTGTTCCGCTTCCTGAACGACGAGCCAGATGTGAGTGGTCCCCTTGGGCCGAATGTCAAAGAGAAGTCTCTGATGTTCGAACAGGCCCTGCGCCTACGCCGAGATGTGCCCACCAAGCTCCTGTCGCGTCCGGTTAACTACTACGAGGC---TTCTCGGAATATCGTTAACCAGACCCGCCTCTAGTAGCGAATCG-GGATGGGACT--GGAA-CAGCCCCGAACAAA--------A
droBip1 scf7180000396769:113284-113528 - CCAAGCAGATGGTCGATGATGCGTTCGGCTTCCTGAACGACGAGCCAGATGTGAGTGGTCCCCTTGGGCCGAATGTCAAAGAGAAGTCTCTGATGTTCGAGCAGGCCCTGCGCCTGCGCCGGGATGTGCCCACCAAGCTCCTATCGCGCCCGGTTAACTACTACGAGGCGACTCCCCGGAAAATCATTAACCAGACCCGCCTCTAGTAGCGAATCG-GGATGGGACT--GAAA-CAGCCCTGAACAAA--------A
dp5 4_group3:1577367-1577615 + dps_1499 CCAAGCAGATGGTGGACGATGTGTTCGGCTTCCTCAACGACGAGCCCGATGTGAGTGGGCCCCTGGGGCCGAATGTCAAGGCGAAGTCTCTGATGTTCGAGCGGGAGCTGCGCCTGCGCAAAGACGTGCCCACGAAGCTCCTGTCCCGGCCCGTCAACTACTACGAGGCGGCGCCGCGGAAGATCGTCAACCAGACCCGCCTCTAGTAGGGACGCTCGGCCGGGAC---AGAG-GGGCCCTGAACAAAC-TAG---A
droPer2 scaffold_1:3048515-3048763 + dpe_539 CCAAGCAGATGGTGGACGATGTGTTCGGCTTCCTCAACGACGAGCCCGATGTGAGTGGTCCCCTGGGGCCGAATGTCAAGGCGAAGTCTCTGATGTTCGAGCGGGAGCTGCGCCTGCGCAAAGACGTGCCCACGAAGCTCCTGTCCCGGCCCGTCAACTACTACGAGGCGGCGCCGCGGAAGATCGTCAACCAGACCCGCCTCTAGTAGGGACGCTCGGCCGGGAC---AGAG-GGGCCCTGAACAAAC-TAG---A
droWil2 scf2_1100000004516:3247124-3247361 - dwi_1172 CGAAACAAATCGTCGACGACGTATTTGGCTTCCTCAACGATGAGCCCGATGTGAGTGGTCCGCTGGGGCCGAATGTCAAAGAGAAGTCTCTGATGTTCGAGCGTGAACTGCGCCTGCGCAAAGACATACCAACCAAATTGCTGTCCCGTCCCGTAAACTACTATGAGGCAGCGCCTCGAAAAATAGTTAATCAGACGCGTCTCTAGTAGCAA-------CGGCCACT--GGGA-CAGCCTCGAACAAA---------
droVir3 scaffold_13246:473703-473949 - dvi_22153 CCAAGCAGATTGTGGACGACGTGTTCGGCTTCCTGAACGACGAGCCCGATGTGAGTGGTCCATTGGGGCCGAATGTCAAGGAGAAGTCCTTGATATTCGAGCGGCAATTGCGCCTACGCAAAGATGTCCCCACCAAGCTGCTGTCCCGACCCGTCAACTACTACGAGGCGGCGCCTCGCAAGGTCGCCGACCAGACGCGTCTCTAGCAGTTG--CC-GGGTGCCACC--GGGT-CAGCGCTGAACAAAT-TAG---A
droMoj3 scaffold_6500:433152-433389 - CGAAGCAGATTGTAGACGACGTGTTCGGCTTCCTGAATGACGAGCCCGACGTGAGTGGTCCACTGGGGCCGAATGTCAAGGAGAAGTCTTTGATATTCGAGCGGCAGTTGCGCTTGCGCAAAGACGTCCCCACCAAGCTGCTGTCCCGCCCCGTCAACTACTATGAGGCGGCGCCTCGAAAGATTGTCGATCAGACGCGCCTCTAGCAGTTG-------CGAGTGCT--CGGG-CAGCCCTGAACAAA---------
droGri2 scaffold_15252:16786168-16786410 + CTAAGCAGATGGTGGACGATGTTTTCGGTTTTCTCAACGATGAGCCTGATGTGAGTGGTCCCCTGGGACCGAATGTCAAAGAGAAATCGCTGATCTTTGAGCGTCAGTTGAGACTGCGCAAAGATGTGCCCACCAAGCTGCTCTCCAGACCCGTCAACTACTATGAGGCGGCGCCGCGCCAGATTATCGATCAGACGCGTCTCTAGAAGTG-------GTGGTTGCT--GGAA-CAGCCATGAACAAAT-TAG---A

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
CCAAGCAAATGGTGGATGACGTGTTCCGCTTCCTAAACGATGAACCCGATGTGAGTGGTCCTCTGGGGCCGAATGTCAAAGAGAAGTCTATGATGTTCGAGCAGGCATTGCGCCTGCGCAGAGATGTGCCCACCAAGCTCCTTTCCCGCCCGGTCAACTATTACGAGGCGGCGCCTCGGAAGATTGTCAACCAGACCCGCCTCTAGTAGCGAATCA-GGCTGGGACT--GGAA-CAGATCCGAACAAACCTAG---ASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................CGGAAGATTGTCAACCAGAC.............................................................2014.00400400000000000000
.............................................................................................................................................................................................................GTAGCGAATCA-GGCTGGGACT--............................2112.00201100000000000000
........................................................................................................................................................................................................CTCTAGTAGCGAATCA-GGCTGGGACT--............................2612.00200200000000000000
......................................................................................................................................................................................................................................GAA-CAGATCCGAACAAACCTAG---A2312.00200200000000000000
.........................................................................................................................................................................................................................GGCTGGGACT--GGAA-CAGATC.................2012.00200200000000000000
....................................................................................AGTCTATGATGTTCGAGC...........................................................................................................................................................1812.00201100000000000000
.......................................................................................CTATGATGTTCGAGCAGGC.......................................................................................................................................................1912.00201010000000000000
......................................................................................................................................................................................................................................GAA-CAGATCCGAACAAACCT......2011.00101000000000000000
..............GATGACGTGTTCCGCTTC.................................................................................................................................................................................................................................1811.00100010000000000000
..........GGTGGATGACGTGTTCCGCTTCCTAAAC...........................................................................................................................................................................................................................2811.00100010000000000000
................................................................................................................................................................................CGGAAGATTGTCAACCAGACCC...........................................................2211.00100100000000000000
..................................................................................................................................................................................................................GAATCA-GGCTGGGACT--GGAA-CAGATCC................2711.00101000000000000000
..............................................................................................................................................................................CTCGGAAGATTGTCAACCAGACCC...........................................................2411.00100100000000000000
............................................................................................................................................................................................................AGTAGCGAATCA-GGCTGGGACT--............................2211.00100000000000100000
....................................................................................................................................................................................................................ATCA-GGCTGGGACT--GGAA-CAGATC.................2411.00100100000000000000
............................................................................CAAAGAGAAGTCTATGATGTT................................................................................................................................................................2111.00100010000000000000
..................................AAACGATGAACCCGATGTGAGT.........................................................................................................................................................................................................2211.00100010000000000000
...............................................................................................................................................................................................................AGCGAATCA-GGCTGGGACT--G...........................2011.00100001000000000000
..................................................................................................................................................................................GAAGATTGTCAACCAGACCCG..........................................................2111.00100100000000000000
..............................................................................................................................................................................CTCGGAAGATTGTCAACC.................................................................1811.00101000000000000000
...................................AACGATGAACCCGATGTGAG..........................................................................................................................................................................................................2011.00101000000000000000
..............................................................................................................................................................TATTACGAGGCGGCGCCT.................................................................................1811.00100100000000000000
.................................................................................................................................................................................................................................CT--GGAA-CAGATCCGAACAAACCT......2311.00100100000000000000
.................................................................................................................................................................................................................CGAATCA-GGCTGGGACT--GGAA-C......................2211.00100100000000000000
...........................................................................................................................................................................CGCCTCGGAAGATTGTCAACC.................................................................2111.00101000000000000000
...........................................................................................................................................................................................................................CTGGGACT--GGAA-CAGATCC................1911.00100100000000000000
..........................................AACCCGATGTGAGTGGTC.....................................................................................................................................................................................................1811.00100010000000000000
......................................................................................................................................................................................................................................GAA-CAGATCCGAACAAACCTAG---G2311.00100100000000000000
........................................................................................................................................GCTCCTTTCCCGCCCGGTCA.....................................................................................................2011.00100000000000100000
.CAAGCAAATGGTGGATGA..............................................................................................................................................................................................................................................1811.00100000000000100000
..........................................................................................................................................................................................................................GCTGGGACT--GGAA-CAGATCC................2011.00100100000000000000
.........................................................................................................................................................................GGCGCCTCGGAAGATTGTCAA...................................................................2111.00100000000000001000
...............................................................................AGAGAAGTCTATGATGTTCGAGCA..........................................................................................................................................................2411.00100010000000000000
..................................................................................................................................................................................GAAGATTGTCAACCAGACCCGCCT.......................................................2411.00100100000000000000
...........................................................................................................................................................................................................................CTGGGACT--GGAA-CAC....................15180.06100000000100000000
droSec2
CCAAGCAAATGGTGGATGACGTGTTCCGCTTCCTAAACGATGAACCCGATGTGAGTGGTCCTCTGGGGCCGAATGTCAAAGAGAAGTCTATGATGTTCGAGCAGGCATTGCGCCTGCGCAGAGACGTGCCCACCAAGCTCCTTTCCCGCCCGGTCAACTATTACGAGGCGGCGCCTCGGAAGATTGTCAACCAGACCCGCCTCTAGTAGCGAATCA-GGCTGGGACT--GGAA-CAGATCCGAACAAAC-TAG---ASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................AGTCTATGATGTTCGAGC...........................................................................................................................................................1811.0010010
...............................................................................................................................................................................................................AGCGAATCA-GGCTGGGACT--G...........................2011.0010010
.......................................................................................CTATGATGTTCGAGCAGGCAT.....................................................................................................................................................2111.0010001
.......................................ATGAACCCGATGTGAGTGGTC.....................................................................................................................................................................................................2111.0010010
................................................ATGTGAGTGGTCCTCTGGG..............................................................................................................................................................................................1911.0010010
.........................................................................................................................................................................................................................GGCTGGGACT--GGAA-CAGATCCGA..............2311.0010100
..AAGCAAATGGTGGATGACGTGTTCCG.....................................................................................................................................................................................................................................2611.0010010
.................GACGTGTTCCGCTTCCTAAACGAT........................................................................................................................................................................................................................2411.0011000
........................................................................................................................................................................................TGTCAACCAGACCCGCCTCTAGT..................................................2311.0011000
.........................................................................................................................................................................................................................GGCTGGGACT--GGAA-CAGATC.................2011.0010010
.............................................................................................................................................................................................ACCAGACCCGCCTCTAGTAGCGAATCA-........................................2711.0010010
.......................................................................................................................................................................................................................................AA-CAGATCCGAACAAAC-TAG---A2111.0010100
..............................................................................................................................TGCCCACCAAGCTCCTTTCCC..............................................................................................................2111.0010010
...........................................................................................GATGTTCGAGCAGGCATTGCGCCT..............................................................................................................................................2411.0010010
.................................................TGTGAGTGGTCCTCTGGGGCT...........................................................................................................................................................................................2111.0010100
......................................GATGAACCCGATGTGAGT.........................................................................................................................................................................................................1811.0010010
....GCAAATGGTGGATGACGTGTT........................................................................................................................................................................................................................................2111.0010100
......................................................................GAATGTCAAAGAGAAGTCT........................................................................................................................................................................1911.0010010
....................................................................................................................................................................................................................ATCA-GGCTGGGACT--GGAA-C......................1911.0010010
..................................AAACGATGAACCCGATGTGAGT.........................................................................................................................................................................................................2211.0010100
......................................................................................................................................................................................................................................GAA-CAGATCCGAACAAAC-TA.....2011.0010010
........ATGGTGGATGACGTGTTCCGC....................................................................................................................................................................................................................................2111.0011000
.........................................................................................................................................................................................................................GGCTGGGACT--GGAA-CAGATCCGAA.............2411.0011000
...................................................................................AAGTCTATGATGTTCGAGCAGGC.......................................................................................................................................................2311.0010100
.............................................................................AAAGAGAAGTCTATGATGTTCGAGCA..........................................................................................................................................................2611.0010100
..AAGCAAATGGTGGATGACGTG..........................................................................................................................................................................................................................................2111.0010100
........................................................................................................................................................................................................CTCTAGTAGCGAATCA-GGCTGGGACT--............................2611.0011000
...........................................................................................................................................................................................................................CTGGGACT--GGAA-CAGATC.................1811.0010010
.......AATGGTGGATGACGTGTTCC......................................................................................................................................................................................................................................2011.0010100
.............................................................................AAAGAGAAGTCTATGATGTT................................................................................................................................................................2011.0010100
......................................GATGAACCCGATGTGAGTGGTCCTCT.................................................................................................................................................................................................2611.0010100
.............................................................................................................................................................................................................GTAGCGAATCA-GGCTGGGACT--G...........................2211.0011000
.................................................................................AGAAGTCTATGATGTTCGAGCAGG........................................................................................................................................................2411.0010100
dm3
CCAAGCAAATGGTGGATGACGTGTTCCGCTTCCTAAACGATGAACCCGATGTGAGTGGTCCTCTGGGGCCGAATGTCAAAGAGAAGTCTATGATGTTCGAGCAGGCATTGCGTCTGCGTAGAGATGTGCCCACCAAGCTCCTTTCCCGCCCGGTCAACTATTACGAGGCGGCGCCTAGGAAGATTGTCAACCAGACCCGCCTCTAGTAGCGAATCA-GGCTGGGACT--GGAA-AAGATCCGAACAAAC-TAG---ASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................TTACGAGGCGGCGCCTAGGAAGAT.........................................................................2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................AAAGAGAAGTCTATGATGTTCGAGC...........................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000001000000000000000
.......................................................................................CTATGATGTTCGAGCAGGC.......................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000100000000000100000000
......AAATGGTGGATGACGTGTTCC......................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000
.......................................ATGAACCCGATGTGAGTGGTC.....................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
...............................................................................................................................................................................................................AGCGAATCA-GGCTGGGACT--G...........................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
................................................................................GAGAAGTCTATGATGTTCGAGCA..........................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................ATTGCGTCTGCGTAGAGATG...................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000
...............................................................................................TTCGAGCAGGCATTGCGTCTG.............................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................................................................CAAAGAGAAGTCTATGATGTT................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................................................................................................................................................................GCCTAGGAAGATTGTCAACCAGACCCG..........................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AGCAAATGGTGGATGACGTGTTCCG.....................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................................................................................................................................................................................................................CT--GGAA-AAGATCCGAACAAAC-TA.....2311.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GATGTGAGTGGTCCTCTGGGGCCGA.........................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.........................................................................................ATGATGTTCGAGCAGGCAT.....................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
......AAATGGTGGATGACGTGTTCCGC....................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................................................................................................TGCGTCTGCGTAGAGATGTGCCCAC............................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................GAAGTCTATGATGTTCGAGCA..........................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................CCGATGTGAGTGGTCCTCTGG...............................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TGATGTTCGAGCAGGCATTGCGTCTG.............................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......AATGGTGGATGACGTGTTCCGC....................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................ATTGCGTCTGCGTAGAGATGTGCCCACC...........................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................................................................................................................................................................................AATCA-GGCTGGGACT--GGAA-AAGAT..................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ATGGTGGATGACGTGTTCC......................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................................................................................................................................................................GCCTAGGAAGATTGTCAACCAGA..............................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....................................................................................................................................................................................................CCGCCTCTAGTAGCGAATCA-GGCTGGGA................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
............................................................................................................................................................................................AACCAGACCCGCCTCTAGTAGC...............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................AGTAGCGAATCA-GGCTGGGACT--G...........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................................................................................................................................................................CTAGGAAGATTGTCAACCAGACC............................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................GTAGCGAATCA-GGCTGGGACT--AT..........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................ATTGCGTCTGCGTAGAGATGTGC................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........................................................................................................ATTGCGTCTGCGTAGAGATGTGCCCAC............................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................TATGATGTTCGAGCAGGCATC....................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................TACGAGGCGGCGCCTAGGAAG...........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................GGCGCCTAGGAAGATTGTCAA...................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........................................................................................GATGTTCGAGCAGGCATTGCGT................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................................................CTGGGGCCGAATGTCAAAGAG..............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
........ATGGTGGATGACGTGTTCCGC....................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
......................................................................GAATGTCAAAGAGAAGTA.........................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................GGCTGGGACT--GGAA-AAGA...................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
......................................................................................................................................................CGGTCAACTATTACGAGGC........................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................CA-GGCTGGGACT--GGAA-AAGA...................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................ACGATGAACCCGATGTGAGT.........................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
...............................................................TGGGGCCGAATGTCAAAGAGAAGT..........................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........................................................................................GATGTTCGAGCAGGCATTGCGTCTG.............................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....................................................................................AGTCTATGATGTTCGAGCAGGC.......................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
................................................................................GAGAAGTCTATGATGTTCGAGCAGGC.......................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............................................................TGGGGCCGAATGTCAAAGAGAAGTC.........................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................GGTCCTCTGGGGCCGAATGTCAAAGA...............................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................GGACT--GGAA-AAGATCCGAACAAAC-TA.....2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TGGTGGATGACGTGTTCCGCT...................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................GAAGTCTATGATGTTCGAGCAGGC.......................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.....................................................................................................................................................................................................................................GGAA-AAGATCCGAACAAAC-GGA---.2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
................................................................................................................................................................................................AGACCCGCCTCTAGTAGCGAATCA-G.......................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................GGTCAACTATTACGAGGCGGCGCCTAGGA.............................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................GATGAACCCGATGTGAGTGGTC.....................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................CTGCGTAGAGATGTGCCCACCAAGC.......................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................................................................................................................................................GGTCAACTATTACGAGGCGGC.....................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
........................................................GGTCCTCTGGGGCCGAATGTCAAAGAGA.............................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GCAAATGGTGGATGACGT...........................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................CCCGATGTGAGTGGTCCTCTGGGGC............................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........................................................................................................GCATTGCGTCTGCGTAGAGATGTGCC...............................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................TGTGAGTGGTCCTCTGGGGC............................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.........................CCGCTTCCTAAACGATGAACCCGAT...............................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................TGAACCCGATGTGAGTGGTCCT...................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................................................................................................CGTAGAGATGTGCCCACCA..........................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...............................................................................AGAGAAGTCTATGATGTTCGAGCAGGC.......................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................TCTAGTAGCGAATCA-GGCTGG..................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...AGCAAATGGTGGATGACGTGTTCC......................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.............................................................................................................GCGTCTGCGTAGAGATGTGCC...............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................TGGGGCCGAATGTCAAAGAG..............................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.CAAGCAAATGGTGGATGACGT...........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................ATGTGCCCACCAAGCTCCTTT.................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................AACCCGATGTGAGTGGTC.....................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
..........................................................................GTCAAAGAGAAGTCTATGATGT.................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................TCA-GGCTGGGACT--GGAA-AAGATCCGAAC............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................AGGCATTGCGTCTGCGTAGAG......................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.........................................................................................................................................................................................................TCTAGTAGCGAATCA-GGCTGGGA................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........................................................................................................................................................................GGCGCCTAGGAAGATTGTCAACC.................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................................................TGGGGCCGAATGTCAAAGAGA.............................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...........................................................................................GATGTTCGAGCAGGCATTGCGTT...............................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................................................................................................................................................................................................................GGAA-AAGATCCGAACAAAC-GG.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
........................................................................................TATGATGTTCGAGCAGGC.......................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
droEre2
CCAAGCAAATGGTGGATGACGTGTTCCGCTTCCTGAACGATGAACCCGATGTGAGTGGTCCTCTGGGGCCGAATGTCAAAGAGAAGTCTATGATGTTCGAGCAGGCATTGCGCCTGCGCAGAGATGTGCCCACCAAGCTCCTTTCCCGCCCGGTCAACTATTATGAGGCGGCGCCTCGGAAGATTGTCAACCAGACCCGCCTCTAGTAGCGAATCA-GGCTGGGACT--GGAA-CAGATCCGAACAAAC-TAG---ASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................GAGAAGTCTATGATGTTCGAGCAGGC.......................................................................................................................................................2611.0010100000
........................................................................................................................................................GTCAACTATTATGAGGCGGCGCCT.................................................................................2411.0010000010
......................................................................................................................................................................................................................................GAA-CAGATCCGAACAAAC-T......1911.0010000010
...............................................GATGTGAGTGGTCCTCTGGGGCCGA.........................................................................................................................................................................................2511.0010001000
....................................................................................................................................................................................................................ATCA-GGCTGGGACT--GGAA-CA.....................2011.0010100000
..................................GAACGATGAACCCGATGTGAGTGGTC.....................................................................................................................................................................................................2611.0010000100
....................................ACGATGAACCCGATGTGAGTGGTC.....................................................................................................................................................................................................2411.0010001000
.....................................................................................................................................................................................................CGCCTCTAGTAGCGAATCA-GGCTGG..................................2511.0011000000
.........................................................................................................................................................................GGCGCCTCGGAAGATTGTCAACCA................................................................2411.0010000010
.............GGATGACGTGTTCCGCTTCCTGAAC...........................................................................................................................................................................................................................2511.0011000000
...........................................ACCCGATGTGAGTGGTCCTCTGGGGC............................................................................................................................................................................................2611.0010000010
..........................................AACCCGATGTGAGTGGTCCTCTGG...............................................................................................................................................................................................2411.0010100000
.....CAAATGGTGGATGACGTGTTCC......................................................................................................................................................................................................................................2211.0010000100
...............................................................................................................................................................................................................AGCGAATCA-GGCTGGGACT--G...........................2011.0010010000
................................CTGAACGATGAACCCGATGTGAGT.........................................................................................................................................................................................................2411.0010001000
.........................................................................................ATGATGTTCGAGCAGGCATTGCGCCT..............................................................................................................................................2611.0010001000
......................................GATGAACCCGATGTGAGT.........................................................................................................................................................................................................1811.0010001000
....................................................................................AGTCTATGATGTTCGAGCAGGCAT.....................................................................................................................................................2411.0010000100
..................................GAACGATGAACCCGATGTGAGTGGT......................................................................................................................................................................................................2511.0010000100
.CAAGCAAATGGTGGATGACGTGT.........................................................................................................................................................................................................................................2311.0010000010
............................................................................................................................................................................................AACCAGACCCGCCTCTAGTAG................................................2111.0011000000
............................................CCCGATGTGAGTGGTCCTCTGGGGCC...........................................................................................................................................................................................2611.0010010000
..AAGCAAATGGTGGATGACGT...........................................................................................................................................................................................................................................2011.0010000100
.............................................................................AAAGAGAAGTCTATGATGTTCGAGC...........................................................................................................................................................2511.0010000100
droYak3
CCAAGCAAATGGTGGACGATGTGTTCCGCTTCCTAAACGACGAACCCGATGTGAGTGGTCCTCTGGGGCCGAATGTCAAAGAGAAGTCTATGATGTTCGAGCAGGCACTGCGCCTGCGCAGAGATGTGCCCACCAAGCTCCTTTCCCGCCCGGTCAACTATTATGAGGCGGCGCCTCGGAAGATTGTCAACCAGACCCGCCTCTAGTAGCGAATCA-GGCTGGGACT--GGAA-GAGATCCGAACAAAC-TAG---ASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................................................................................GTCTATGATGTTCGAGCAGG........................................................................................................................................................2012.00200010010000
.........................................................................................................................................................................................................................GGCTGGGACT--GGAA-GAGATCC................2112.00201000010000
..................................................................................GAAGTCTATGATGTTCGAGCAGG........................................................................................................................................................2312.00200100010000
........................TCCGCTTCCTAAACGACGAACCC..................................................................................................................................................................................................................2311.00101000000000
.................................................................................AGAAGTCTATGATGTTCGAGCAGG........................................................................................................................................................2411.00100000010000
.............................................................................................................................................................................................................GTAGCGAATCA-GGCTGGGACT--GGAA-GAG....................2811.00100000010000
..................................................................................................................................................................................................................GAATCA-GGCTGGGACT--GGA.........................1911.00100000010000
..................................................................................................................................................................................................................GAATCA-GGCTGGGACT--GGAA-GAGATCC................2711.00100000010000
...........................................................................................................................................................AACTATTATGAGGCGGCGCCTCGGAA............................................................................2611.00101000000000
................................................................................................................................................................................................................GCGAATCA-GGCTGGGACT--............................1811.00110000000000
......................................................................................................................................AAGCTCCTTTCCCGCCCGGTCAACT..................................................................................................2511.00101000000000
..............................................................................................................................................................................CTCGGAAGATTGTCAACC.................................................................1811.00110000000000
..........................................................................................................................................................................................TCAACCAGACCCGCCTCTAGT..................................................2111.00101000000000
.........................................................................................................................................................................GGCGCCTCGGAAGATTGTCAACC.................................................................2311.00100000010000
................................................................................................................................................................................................AGACCCGCCTCTAGTAGCGAATC..........................................2311.00100010000000
.....................................................................................GTCTATGATGTTCGAGCAGGCACTGCGCC...............................................................................................................................................2911.00100000010000
..............................................................................................GTTCGAGCAGGCACTGCGC................................................................................................................................................1911.00101000000000
..............................................................CTGGGGCCGAATGTCAAAGAGAAGTCT........................................................................................................................................................................2711.00100000010000
............................................................................................................................................................................GCCTCGGAAGATTGTCAACC.................................................................2011.00100000010000
...............................................................................................................................................................................................................AGCGAATCA-GGCTGGGACT--GGA.........................2211.00100000010000
.....................................................................CGAATGTCAAAGAGAAGTCT........................................................................................................................................................................2011.00100000010000
........ATGGTGGACGATGTGTTCCGCTT..................................................................................................................................................................................................................................2311.00100100000000
...........................................................................................................................................................................................................................CTGGGACT--GGAA-GAGATCCGA..............2111.00101000000000
...........................................................................................................................................................................................................TAGTAGCGAATCA-GGCTGGGACT--G...........................2411.00100000010000
...............................CCTAAACGACGAACCCGAT...............................................................................................................................................................................................................1911.00100100000000
...............................................................................................................................................................................................................................GACT--GGAA-GAGATCCGAAC............1911.00100100000000
..AAGCAAATGGTGGACGATGTGTTCC......................................................................................................................................................................................................................................2511.00100000010000
....................................................................................................................................................................................AGATTGTCAACCAGACCCGCCTT......................................................2311.00101000000000
.......AATGGTGGACGATGTGTTCCG.....................................................................................................................................................................................................................................2111.00101000000000
.........................................................................................................................................................................GGCGCCTCGGAAGATTGTCAACCA................................................................2411.00100000010000
............................................................................CAAAGAGAAGTCTATGATG..................................................................................................................................................................1911.00101000000000
...................................................................................................................GCGCAGAGATGTGCCCACCAAGCTC.....................................................................................................................2511.00100100000000
......AAATGGTGGACGATGTGTTCCGCTTCCC...............................................................................................................................................................................................................................2811.00100100000000
..AAGCAAATGGTGGACGATGTGTT........................................................................................................................................................................................................................................2311.00100000010000
...AGCAAATGGTGGACGATGTGTTCCG.....................................................................................................................................................................................................................................2511.00100000010000
............................................................................................................TGCGCCTGCGCAGAGATGTGC................................................................................................................................2111.00101000000000
..............GACGATGTGTTCCGCTTCCTA..............................................................................................................................................................................................................................2111.00101000000000
.............................................................................................................................................................................CCTCGGAAGATTGTCAACCAG...............................................................2111.00101000000000
........................................................................................................................................................................................................CTCTAGTAGCGAATCA-GGCTGG..................................2211.00100000010000
....................................................................................AGTCTATGATGTTCGAGCAGGC.......................................................................................................................................................2211.00100000010000
........................................................................................................................................................................................................................................A-GAGATCCGAACAAAC-TAG---A2011.00100000010000
..................................................................................................................................................................................................................GAATCA-GGCTGGGACT--GGAA-GAG....................2311.00100000010000
.................................................................................................................................................................................GGAAGATTGTCAACCAGACCC...........................................................2111.00110000000000
......AAATGGTGGACGATGTGTTCC......................................................................................................................................................................................................................................2111.00100100000000
droEug1
CCAAGCAGATGGTAGACGACGTCTTCCGGTTCCTTAATGACGAGCCCGATGTGAGTGGTCCCCTGGGGCCGAATGTCAAAGAGAAGTCTATGATGTTCGAGCAGGTGCTGCGCCTGCGCAAAGATGTGCCCACGAAACTCCTGTCCCGCCCGGTCAACTACTATGAGGCGGCGCCTCGGAAGATTGTCAACCAGACCCGCCTCTAGTAGCAGACCA-GGCTGGGACT--GGAG-CAGCCCTGAACAAAC-TAG---ASizeHit CountTotal NormTotal
No Reads
droBia1
CCAAACAAATGGTGGACGACGTGTTCCGGTTCCTCAATGACGAACCCGATGTGAGTGGTCCTCTGGGGCCGAATGTCAAAGAGAAGTCTATGATGTTCGAGCAGGCGCTGCGCCTGCGCAAAGATGTGCCTACCAAGCTCCTGTCCCGCCCGGTGAACTACTATGAGGCGGCGCCTCGTAAGATTGTCAACCAGACCCGTCTCTAGTAGGGAATCA-GGCTGGGACT--GGAG-CAGACCCGAACAAAC-TAG---ASizeHit CountTotal NormTotal
No Reads
droTak1
CCAAGCAGATGGTGGACGACGTGTTCCGGTTCCTCAACGACGAACCCGACGTGAGTGGTCCCCTGGGGCCGAATGTCAAAGAGAAGTCTATGATGTTCGAGCAGGCGCTGCGCCTGCGCAGGGATGTGCCAACCAAACTCCTCTCCCGCCCGGTCAACTACTATGAGGCTGCGCCTCGGAAGATTGTCAACCAGACGCGTCTCTAGTAGCGAATCG-GGATGGGACT--GGAG-CAGCCCCGAACAAAC-TAG---ASizeHit CountTotal NormTotal
No Reads
droEle1
CCAAACAGATGGTAGACGATGTGTTCCGCTTCCTCAACGACGAACCCGATGTGAGTGGTCCTCTGGGGCCGAATGTCAAAGAGAAGTCTCTGATGTTCGAGCAGGCACTGCGCCTGCGCAAAGATGTACCCACCAAGCTCCTGTCCCGCCCGGTCAACTATTATGAGGCGGCGCCTCGGAAGATTGTCAACCAGACCCGCCTCTAGTAGCGGATCA-GGCTGGGACTTGGGAA-CAGCCCCGAACAAAC-TAG---ASizeHit CountTotal NormTotal
No Reads
droRho1
CCAAGCAGATGGTGGACGACGTGTTCCGGTTTCTCAACGACGAGCCCGACGTGAGTGGTCCCTTGGGGCCGAATGTCAAAGAGAAGTCTCTGATGTTTGAGGAGGCGTTGCGCATGCGCAGAGATGTCCCTACCAAGCTCCTGTCCCGCCCGGTCAACTATTATGAGGCGGCGCCTCGGAAGATTGTCAACCAGACCCGCCTCTAGTAGCGAATCA-GGCTGGGACT--GGAA-CAGCCCCGAACAAAC-TAG---ASizeHit CountTotal NormTotal
No Reads
droFic1
CCAAGCAGATGGTGGACGACGTGTTCCGCTTCCTCAACGACGAACCCGATGTGAGTGGTCCCCTGGGGCCGAATGTCAAAGAGAAGTCTCTGATTTTCGAGCAGGCGTTGCGCATGCGCAGGGATGTGCCCACCAAGCTCCTCTCCCGCCCGGTCAACTATTACGAGGCGGCGCCGCGGAAGATCGTCAACCAGACCCGCCTCTAGTAGCGGATCG-GGCTGGGACT--GGAA-CTGCCCCGAACAAAA-TAGTAAASizeHit CountTotal NormTotal
No Reads
droKik1
CCAAGCAGATGGTCGACGAGATGTTCCGCTTCCTCAACGACGAGCCCGACGTGAGTGGTCCCCTGGGGCCGAATGTCAAAGAGAAGTCTCTGATGTTCGAGCAGGCGCTGCTCATGCGCCGAGATGTGCCCACAAAGCTCCTCTCCCGCCCGGTCAACTATTACGAGGCGGCGCCTCGAAAGATTGTCAACCAGACCCGCCTCTAGTAGCGGACCG-GGCTGGGACT--GGAACTGGCCCCGAACAAAC-TAG---ASizeHit CountTotal NormTotal
No Reads
droAna3
CCAAGCAGATGGTCGACGATGTGTTCCGCTTCCTGAACGACGAGCCAGATGTGAGTGGTCCCCTTGGGCCGAATGTCAAAGAGAAGTCTCTGATGTTCGAACAGGCCCTGCGCCTACGCCGAGATGTGCCCACCAAGCTCCTGTCGCGTCCGGTTAACTACTACGAGGC---TTCTCGGAATATCGTTAACCAGACCCGCCTCTAGTAGCGAATCG-GGATGGGACT--GGAA-CAGCCCCGAACAAA--------ASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................GGC---TTCTCGGAATATCGTT.....................................................................1915.005010031
.................................................................................................CGAACAGGCCCTGCGCCTACGCCGAGAT....................................................................................................................................2812.002000002
...........GTCGACGATGTGTTCCGCTTCCT...............................................................................................................................................................................................................................2311.001100000
....................................................................................................................................................................................................CCGCCTCTAGTAGCGAATCG-G.......................................2111.001100000
...............................................................................AGAGAAGTCTCTGATGTTCGAACAGGC.......................................................................................................................................................2711.001010000
.....CAGATGGTCGACGATGTGTTCC......................................................................................................................................................................................................................................2211.001000010
........................................................GGTCCCCTTGGGCCGAATGTCAA..................................................................................................................................................................................2311.001010000
.....................................................................................GTCTCTGATGTTCGAACAGG........................................................................................................................................................2011.001010000
...............................................................................................................................GCCCACCAAGCTCCTGTCGCGT............................................................................................................2211.001100000
..............................................................................................................................................................................CTCGGAATATCGTTAACCAGACCCGCCT.......................................................2811.001100000
.............................................................................................................................................................................TCTCGGAATATCGTTAACCAG...............................................................2111.001100000
.........................................................................................CTGATGTTCGAACAGGCCCTG...................................................................................................................................................2111.001100000
..................ATGTGTTCCGCTTCCTGAACGACGAGC....................................................................................................................................................................................................................2711.001010000
......................................................................................................................................................................................................................CG-GGATGGGACT--GGAA-CA.....................1811.001000100
........................................................................................................................................................................................................CTCTAGTAGCGAATCG-GGATGGGA................................2411.001000010
...................................................................................................................................................GTCCGGTTAACTACTACGAGGC---.....................................................................................2211.001010000
CCAAGCAGATGGTCGACGATG............................................................................................................................................................................................................................................2111.001100000
.......................................................................................CTCTGATGTTCGAACAGGCCC.....................................................................................................................................................2111.001100000
...........................................................................................GATGTTCGAACAGGCCCTGCGCCT..............................................................................................................................................2411.001010000
............................................................................................................................................................................................................AGTAGCGAATCG-GGATGG..................................1811.001010000
..............................................................................AAGAGAAGTCTCTGATGTTCGAACA..........................................................................................................................................................2511.001010000
.................................................................................................CGAACAGGCCCTGCGCCTACGCC.........................................................................................................................................2311.001010000
..........................................................................................................................GATGTGCCCACCAAGCTCCTGTCGC..............................................................................................................2511.001100000
.............................................................................................................................................................................................................GTAGCGAATCG-GGATGGGA................................1911.001000010
......................................................................................................................................................................GGC---TTCTCGGAATATCGTTAACC.................................................................2311.001010000
..................................................................GGCCGAATGTCAAAGAGA.............................................................................................................................................................................1811.001100000
...................................AACGACGAGCCAGATGTGAGT.........................................................................................................................................................................................................2111.001000010
..................................GAACGACGAGCCAGATGTGAGTGGTCCC...................................................................................................................................................................................................2811.001000010
............................CTTCCTGAACGACGAGCCAGATG..............................................................................................................................................................................................................2311.001010000
...............................................................................................................................................................ACTACGAGGC---TTCTCGGAAT...........................................................................2011.001000010
......................GTTCCGCTTCCTGAACGAC........................................................................................................................................................................................................................1911.001010000
.................................................................................................................................................................................................................CGAATCG-GGATGGGACT--GGAA-CAGCCCC................2811.001010000
.......................TTCCGCTTCCTGAACGACGAG.....................................................................................................................................................................................................................2111.001100000
.....................................................................................................................................................................................................................TCG-GGATGGGACT--GGAA-CAGC...................2111.001000001
...............................................................................................................................................................................................................AGCGAATCG-GGATGGGACT--GGAA-C......................2411.001100000
......................................................................................................................................................................................................GCCTCTAGTAGCGAATCG-G.......................................1911.001001000
.........................................................GTCCCCTTGGGCCGAATGTCAA..................................................................................................................................................................................2211.001010000
.............................................CAGATGTGAGTGGTCCCCTTGGGC............................................................................................................................................................................................2411.001000010
....................................ACGACGAGCCAGATGTGAGTGG.......................................................................................................................................................................................................2211.001000010
...............................................................................................................................................................................................................AGCGAATCG-GGATGGGACT--GGAA-CA.....................2511.001010000
......................................................................GAATGTCAAAGAGAAGA..........................................................................................................................................................................1790.111000100
droBip1
CCAAGCAGATGGTCGATGATGCGTTCGGCTTCCTGAACGACGAGCCAGATGTGAGTGGTCCCCTTGGGCCGAATGTCAAAGAGAAGTCTCTGATGTTCGAGCAGGCCCTGCGCCTGCGCCGGGATGTGCCCACCAAGCTCCTATCGCGCCCGGTTAACTACTACGAGGCGACTCCCCGGAAAATCATTAACCAGACCCGCCTCTAGTAGCGAATCG-GGATGGGACT--GAAA-CAGCCCTGAACAAA--------ASizeHit CountTotal NormTotal
No Reads
dp5
CCAAGCAGATGGTGGACGATGTGTTCGGCTTCCTCAACGACGAGCCCGATGTGAGTGGGCCCCTGGGGCCGAATGTCAAGGCGAAGTCTCTGATGTTCGAGCGGGAGCTGCGCCTGCGCAAAGACGTGCCCACGAAGCTCCTGTCCCGGCCCGTCAACTACTACGAGGCGGCGCCGCGGAAGATCGTCAACCAGACCCGCCTCTAGTAGGGACGCTCGGCCGGGAC---AGAG-GGGCCCTGAACAAAC-TAG---ASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
....................GTGTTCGGCTTCCTCAACGAC........................................................................................................................................................................................................................2112.0020200000000
..................................................................................................................................................................ACGAGGCGGCGCCGCGGAAG...........................................................................2012.0020200000000
........................................................................................................................................................................................................CTCTAGTAGGGACGCTCGGC.....................................2012.0020200000000
..................................CAACGACGAGCCCGATGTGAGT.........................................................................................................................................................................................................2212.0020200000000
.............................................................................................................................GTGCCCACGAAGCTCCTGTCCC..............................................................................................................2211.0010100000000
..............................................................................................................................................................TACTACGAGGCGGCGCCGCGGA.............................................................................2211.0010100000000
..........................................................................................................................................................CAACTACTACGAGGCGGCGC...................................................................................2011.0010000001000
.......................................................................................CTCTGATGTTCGAGCGGGAGCTGCGC................................................................................................................................................2611.0010000001000
...........................................................................................................................................................AACTACTACGAGGCGGCGCC..................................................................................2011.0010100000000
....................................................................................................................CGCAAAGACGTGCCCACGA..........................................................................................................................1911.0010100000000
................................................................................GCGAAGTCTCTGATGTTCGA.............................................................................................................................................................2011.0010000001000
.CAAGCAGATGGTGGACGAT.............................................................................................................................................................................................................................................1911.0010100000000
.............................................................................AAGGCGAAGTCTCTGATGTT................................................................................................................................................................2011.0010100000000
......................................................................................................................................................................................ATCGTCAACCAGACCCGCCTCTAGT..................................................2511.0010100000000
......................GTTCGGCTTCCTCAACGACGAGCCC..................................................................................................................................................................................................................2511.0010100000000
.......................................................................................CTCTGATGTTCGAGCGGGAGCT....................................................................................................................................................2211.0010100000000
...........................................................................................................................................................................................CAACCAGACCCGCCTCTAGTAGGGA.............................................2511.0010000100000
................................................................................................................................................................CTACGAGGCGGCGCCGCGG..............................................................................1911.0010100000000
.........................................................................................CTGATGTTCGAGCGGGAGCTGCGCCTGC............................................................................................................................................2811.0010000001000
..............................................CGATGTGAGTGGGCCCCTGG...............................................................................................................................................................................................2011.0010100000000
.............................................CCGATGTGAGTGGGCCCCTGGGGCC...........................................................................................................................................................................................2511.0010010000000
..................................CAACGACGAGCCCGATGTGAGTGG.......................................................................................................................................................................................................2411.0010010000000
.................................................................................................................................................................................................................................C---AGAG-GGGCCCTGAACAAAC-TA.....2211.0010100000000
......................GTTCGGCTTCCTCAACGACGA......................................................................................................................................................................................................................2111.0010100000000
...........................................................................................GATGTTCGAGCGGGAGCTGCGCCTGC............................................................................................................................................2611.0010000001000
............................................CCCGATGTGAGTGGGCCCCTGGGG.............................................................................................................................................................................................2411.0010100000000
...................................................................................AAGTCTCTGATGTTCGAGCGGGA.......................................................................................................................................................2311.0010100000000
.................................................TGTGAGTGGGCCCCTGGGGC............................................................................................................................................................................................2011.0010100000000
.........................................................................................CTGATGTTCGAGCGGGAGCTGCGC................................................................................................................................................2411.0010000001000
.........................................................................................................AGCTGCGCCTGCGCAAAGACG...................................................................................................................................2111.0010100000000
CCAAGCAGATGGTGGACGATGTGT.........................................................................................................................................................................................................................................2411.0010000100000
....................................................................CCGAATGTCAAGGCGAAGTCTCT......................................................................................................................................................................2311.0010100000000
..................................................................................................................................................................................................................GACGCTCGGCCGGGAC---AGAG-GGGCCCT................2711.0010100000000
..........................................................................................................................................................CAACTACTACGAGGCGGCGCC..................................................................................2111.0010100000000
........................................................GGGCCCCTGGGGCCGAATGTCAAGGC...............................................................................................................................................................................2611.0010010000000
.....................................................................................................................................................................................GATCGTCAACCAGACCCGC.........................................................1911.0010100000000
.............................................................................................................................................................................................................GTAGGGACGCTCGGCCGGGAC---A...........................2211.0010100000000
............................CTTCCTCAACGACGAGCCCGA................................................................................................................................................................................................................2111.0010100000000
...............................................................................................................................GCCCACGAAGCTCCTGTCCCGGC...........................................................................................................2311.0010100000000
................................................................................................................................................................................................................GGGACGCTCGGCCGGGAC---A...........................1911.0010100000000
................................................................................GCGAAGTCTCTGATGTTCGAGC...........................................................................................................................................................2211.0010100000000
......................................................................................................................................................................................................GCCTCTAGTAGGGACGCTCGGC.....................................2211.0010000001000
....................GTGTTCGGCTTCCTCAACGA.........................................................................................................................................................................................................................2011.0010100000000
.........................................................................................................................................................................................................TCTAGTAGGGACGCTCGGCCGGG.................................2311.0010100000000
.................................................................................CGAAGTCTCTGATGTTCGAGCGG.........................................................................................................................................................2311.0010100000000
....GCAGATGGTGGACGATGTGTT........................................................................................................................................................................................................................................2111.0010000000001
.................................................................................................................................................................................................................................C---AGAG-GGGCCCTGAACAAA.........1911.0010000000001
...........................................................................................................................................................AACTACTACGAGGCGGCGCCGCGGAA............................................................................2611.0010100000000
.....................................................................................................................GCAAAGACGTGCCCACGAAGCT......................................................................................................................2211.0010100000000
...........................................................................................................................................................................................................TAGTAGGGACGCTCGGCCGG..................................2011.0010100000000
..................................................................................................GAGCGGGAGCTGCGCCTG.............................................................................................................................................1811.0010100000000
.................GATGTGTTCGGCTTCCTCAACGACGA......................................................................................................................................................................................................................2611.0010100000000
.......................................................................................................................AAAGACGTGCCCACGAAGCTCCTGTCCC..............................................................................................................2811.0010100000000
............................................................................................................................................................ACTACTACGAGGCGGCGCCG.................................................................................2011.0010100000000
..........................................................................GTCAAGGCGAAGTCTCTGATG..................................................................................................................................................................2111.0010100000000
droPer2
CCAAGCAGATGGTGGACGATGTGTTCGGCTTCCTCAACGACGAGCCCGATGTGAGTGGTCCCCTGGGGCCGAATGTCAAGGCGAAGTCTCTGATGTTCGAGCGGGAGCTGCGCCTGCGCAAAGACGTGCCCACGAAGCTCCTGTCCCGGCCCGTCAACTACTACGAGGCGGCGCCGCGGAAGATCGTCAACCAGACCCGCCTCTAGTAGGGACGCTCGGCCGGGAC---AGAG-GGGCCCTGAACAAAC-TAG---ASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................GTCAAGGCGAAGTCTCTGATG..................................................................................................................................................................2114.004400000
................................................................................................................................................................................................................................AC---AGAG-GGGCCCTGAACAAAC-TAG---A2513.003300000
.................GATGTGTTCGGCTTCCTCAAC...........................................................................................................................................................................................................................2112.002200000
.........................................................................................................................................................................GGCGCCGCGGAAGATCGTCAAC..................................................................2212.002200000
...............................................GATGTGAGTGGTCCCCTGGG..............................................................................................................................................................................................2012.002000002
................CGATGTGTTCGGCTTCCT...............................................................................................................................................................................................................................1812.002200000
.........TGGTGGACGATGTGTTCGGCTT..................................................................................................................................................................................................................................2211.001010000
............................CTTCCTCAACGACGAGCCCG.................................................................................................................................................................................................................2011.001010000
..................................CAACGACGAGCCCGATGTGAGT.........................................................................................................................................................................................................2211.001001000
.......................................................................................CTCTGATGTTCGAGCGGG........................................................................................................................................................1811.001010000
......................................................................................................................................................................................ATCGTCAACCAGACCCGCCTCTAGT..................................................2511.001010000
.....................................................................................................................................................................................................................................AGAG-GGGCCCTGAACAAA.........1811.001100000
..............................................................................................GTTCGAGCGGGAGCTGCGCC...............................................................................................................................................2011.001010000
.....CAGATGGTGGACGATGTGTTCGGC....................................................................................................................................................................................................................................2411.001000001
.............................................................................AAGGCGAAGTCTCTGATGTT................................................................................................................................................................2011.001100000
....................GTGTTCGGCTTCCTCAAC...........................................................................................................................................................................................................................1811.001100000
...............................................................................................................................GCCCACGAAGCTCCTGTCCC..............................................................................................................2011.001010000
........ATGGTGGACGATGTGTTCGG.....................................................................................................................................................................................................................................2011.001000001
..............................................................................................................................................................................................CCAGACCCGCCTCTAGTAGGGA.............................................2211.001000001
..........................................................................................................................................................................................................CTAGTAGGGACGCTCGGCCGGGG................................2311.001100000
........................................................................................................................................................................................................................CGGCCGGGAC---AGAG-GGGCCCT................2111.001010000
.............................................................................................................................................................................................................GTAGGGACGCTCGGCCGG..................................1811.001000001
...............................................................................................................................................................................................................AGGGACGCTCGGCCGGGAC---AGAG-G......................2411.001000001
.CAAGCAGATGGTGGACGA..............................................................................................................................................................................................................................................1811.001100000
...................................AACGACGAGCCCGATGTGAGTG........................................................................................................................................................................................................2211.001000001
...............................................................................................................................................................................................................................GAC---AGAG-GGGCCCTGAACA...........1911.001010000
droWil2
CGAAACAAATCGTCGACGACGTATTTGGCTTCCTCAACGATGAGCCCGATGTGAGTGGTCCGCTGGGGCCGAATGTCAAAGAGAAGTCTCTGATGTTCGAGCGTGAACTGCGCCTGCGCAAAGACATACCAACCAAATTGCTGTCCCGTCCCGTAAACTACTATGAGGCAGCGCCTCGAAAAATAGTTAATCAGACGCGTCTCTAGTAGCAA-------CGGCCACT--GGGA-CAGCCTCGAACAAA---------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................................................................AGCAA-------CGGCCACT--GGGA-C......................1813.00311010
........................................................................................................................................................................................AGTTAATCAGACGCGTCTCTAGT..................................................2312.00200200
............................................................................................................................................................................................AATCAGACGCGTCTCTAGT..................................................1912.00200110
......................................GATGAGCCCGATGTGAGTGGT......................................................................................................................................................................................................2112.00200200
.............................................................................................................................................................................................................GTAGCAA-------CGGCCACT--GGGA-CA.....................2112.00200200
....................................ACGATGAGCCCGATGTGAGTGGTC.....................................................................................................................................................................................................2411.00100100
CGAAACAAATCGTCGACGACGTA..........................................................................................................................................................................................................................................2311.00100100
....................GTATTTGGCTTCCTCAACGAT........................................................................................................................................................................................................................2111.00100010
................................CTCAACGATGAGCCCGATGTGAGT.........................................................................................................................................................................................................2411.00100100
...........................................................................................................................................................AACTACTATGAGGCAGCGCCT.................................................................................2111.00101000
................................CTCAACGATGAGCCCGATGTGA...........................................................................................................................................................................................................2211.00100100
.........................................................................................................................................................................................GTTAATCAGACGCGTCTCTAGT..................................................2211.00100100
..................................CAACGATGAGCCCGATGTGA...........................................................................................................................................................................................................2011.00100100
.............................................CCGATGTGAGTGGTCCGCTGGG..............................................................................................................................................................................................2211.00100100
..................................................................................................................................................................................................................AA-------CGGCCACT--GGGA-CAGCCTT................2111.00101000
............................................CCCGATGTGAGTGGTCCGCTGG...............................................................................................................................................................................................2211.00100100
........................................................................................TCTGATGTTCGAGCGTGAACT....................................................................................................................................................2111.00100100
.............................TTCCTCAACGATGAGCCCGAT...............................................................................................................................................................................................................2111.00101000
....................................................................................................................................................................................AAATAGTTAATCAGACGCGTCTCTAGA..................................................2711.00100010
............................CTTCCTCAACGATGAGCCCGATGTGAGT.........................................................................................................................................................................................................2811.00100100
.............................................................................................................................................................................CCTCGAAAAATAGTTAATCAGACGCGTC........................................................2811.00110000
..............................................................................................................................................................................CTCGAAAAATAGTTAATCAGAC.............................................................2211.00101000
...............................................................................................................................................................................................................AGCAA-------CGGCCACT--GGGA-CA.....................1911.00100100
.......................................................................................................................................................................................TAGTTAATCAGACGCGTCTCT.....................................................2111.00101000
..........................................................................................................................................................AAACTACTATGAGGCAGCGC...................................................................................2011.00100100
...................CGTATTTGGCTTCCTCAACGA.........................................................................................................................................................................................................................2111.00101000
..AAACAAATCGTCGACGACGTA..........................................................................................................................................................................................................................................2111.00100100
..........................................................................................................................................................................................TTAATCAGACGCGTCTCTAGT..................................................2111.00100010
...........................................................................................................................................................................................................................CGGCCACT--GGGA-CAGCCTCGAAC............2311.00101000
..............................................................................AAGAGAAGTCTCTGATGTTCGAG............................................................................................................................................................2311.00100100
.GAAACAAATCGTCGACGACGTA..........................................................................................................................................................................................................................................2211.00100100
............................CTTCCTCAACGATGAGCCCGA................................................................................................................................................................................................................2111.00100100
.......AATCGTCGACGACGTATTTGG.....................................................................................................................................................................................................................................2111.00101000
.........................................................................................................................................................TAAACTACTATGAGGCAGCGC...................................................................................2111.00100100
.......................................................................................................................................................................................TAGTTAATCAGACGCGTCTCTAGT..................................................2411.00100010
..............................................................................................................................................................................................................TAGCAA-------CGGCCACT--GGGA-CAG....................2111.00100100
............................................................................................ATGTTCGAGCGTGAACTGCGC................................................................................................................................................2111.00101000
.....................................................................................................................................CAAATTGCTGTCCCGTCCC.........................................................................................................1911.00101000
...............................................GATGTGAGTGGTCCGCTGGGGCCGAAT.......................................................................................................................................................................................2711.00100100
.................................................................................................CGAGCGTGAACTGCGCCTGCGCAAA.......................................................................................................................................2511.00101000
....................................................................................................................................................................................AAATAGTTAATCAGACGCGTCTCTAGT..................................................2711.00100010
.............................................................................................................................ATACCAACCAAATTGCTGTCC...............................................................................................................2111.00101000
........................................................................................................................................................GTAAACTACTATGAGGCAGCGCC..................................................................................2311.00101000
.............................................CCGATGTGAGTGGTCCGCTGG...............................................................................................................................................................................................2111.00100100
.............................................................................................................................................................................................................GTAGCAA-------CGGCCACT--GGGA-.......................1911.00100100
.................................................................................................CGAGCGTGAACTGCGCCTGCGC..........................................................................................................................................2211.00100100
...............................................................................................................................................................................................................AGCAA-------CGGCCACT--GGGA-CAGCCTCGAAC............2811.00100010
............................................................................................................................CATACCAACCAAATTGCTGTCCC..............................................................................................................2311.00100100
........................................................................................................................................................................................AGTTAATCAGACGCGTCTCTA....................................................2111.00100100
..........CGTCGACGACGTATTTGGC....................................................................................................................................................................................................................................1911.00100010
......................................................................................................................................................................................ATAGTTAATCAGACGCGTCTCTAGT..................................................2511.00100010
...............................................................................AGAGAAGTCTCTGATGTTCGAGCGTG........................................................................................................................................................2611.00101000
..........................................................................................................................................................AAACTACTATGAGGCAGCGCC..................................................................................2111.00100010
............................................................................CAAAGAGAAGTCTCTGATGTTCGAGC...........................................................................................................................................................2611.00100010
..................................................GTGAGTGGTCCGCTGGGGCCGAATGTCA...................................................................................................................................................................................2811.00100010
......................................GATGAGCCCGATGTGAGTG........................................................................................................................................................................................................1920.50101000
droVir3
CCAAGCAGATTGTGGACGACGTGTTCGGCTTCCTGAACGACGAGCCCGATGTGAGTGGTCCATTGGGGCCGAATGTCAAGGAGAAGTCCTTGATATTCGAGCGGCAATTGCGCCTACGCAAAGATGTCCCCACCAAGCTGCTGTCCCGACCCGTCAACTACTACGAGGCGGCGCCTCGCAAGGTCGCCGACCAGACGCGTCTCTAGCAGTTG--CC-GGGTGCCACC--GGGT-CAGCGCTGAACAAAT-TAG---ASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................GTGGTCCATTGGGGCCGAATGTC....................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................................................................................GTTG--CC-GGGTGCCACC--GGGT-CAGCGCT................2711.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................CACC--GGGT-CAGCGCTGAACAAAT-.......2311.001000000000000000000000000000000000000000000000000000000000010000
........................................................................................................................................................GTCAACTACTACGAGGCGGCG....................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.............................TTCCTGAACGACGAGCCT..................................................................................................................................................................................................................1811.001100000000000000000000000000000000000000000000000000000000000000
...........GTGGACGACGTGTTCGGCTT..................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.................................................TGTGAGTGGTCCATTGGGGCCGAATGTC....................................................................................................................................................................................2811.001000000000000000010000000000000000000000000000000000000000000000
...........................................................................................GATATTCGAGCGGCAATTGCGC................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
........................TCGGCTTCCTGAACGACGAGC....................................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
........ATTGTGGACGACGTGTTCGGC....................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................CGCAAGGTCGCCGACCAGACG............................................................2111.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................GTGCCACC--GGGT-CAGCGCT................1911.001000100000000000000000000000000000000000000000000000000000000000
......................................GACGAGCCCGATGTGAGTGGT......................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................TTG--CC-GGGTGCCACC--GGGT-CAG....................2211.001000000000000000000000000000010000000000000000000000000000000000
....................................ACGACGAGCCCGATGTGAGTG........................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...................................AACGACGAGCCCGATGTGA...........................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.........................CGGCTTCCTGAACGACGAGC....................................................................................................................................................................................................................2011.001100000000000000000000000000000000000000000000000000000000000000
................................................................................................................................CCCACCAAGCTGCTGTCCCGA............................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
droMoj3
CGAAGCAGATTGTAGACGACGTGTTCGGCTTCCTGAATGACGAGCCCGACGTGAGTGGTCCACTGGGGCCGAATGTCAAGGAGAAGTCTTTGATATTCGAGCGGCAGTTGCGCTTGCGCAAAGACGTCCCCACCAAGCTGCTGTCCCGCCCCGTCAACTACTATGAGGCGGCGCCTCGAAAGATTGTCGATCAGACGCGCCTCTAGCAGTTG-------CGAGTGCT--CGGG-CAGCCCTGAACAAA---------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................................................GCAGTTG-------CGAGTGCT--CGGG-CA.....................2113.003000102
.............................................................................................................................................................................................................GCAGTTG-------CGAGTGCT--CGGG-CAG....................2211.001100000
...............................................................................GGAGAAGTCTTTGATATTCGAGCGGC........................................................................................................................................................2611.001000001
......................GTTCGGCTTCCTGAATGACGAGCC...................................................................................................................................................................................................................2411.001100000
.........................................................................................................................................CTGCTGTCCCGCCCCGTCAAC...................................................................................................2111.001000010
.............................................................................................................................................................................................................GCAGTTG-------CGAGTGCT--CGGG-C......................2011.001000001
......AGATTGTAGACGACGTGTTCGGCTTCCT...............................................................................................................................................................................................................................2811.001100000
.......GATTGTAGACGACGTGTTCGG.....................................................................................................................................................................................................................................2111.001100000
droGri2
CTAAGCAGATGGTGGACGATGTTTTCGGTTTTCTCAACGATGAGCCTGATGTGAGTGGTCCCCTGGGACCGAATGTCAAAGAGAAATCGCTGATCTTTGAGCGTCAGTTGAGACTGCGCAAAGATGTGCCCACCAAGCTGCTCTCCAGACCCGTCAACTACTATGAGGCGGCGCCGCGCCAGATTATCGATCAGACGCGTCTCTAGAAGTG-------GTGGTTGCT--GGAA-CAGCCATGAACAAAT-TAG---ASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 04:23 AM