ID:

dsi_4770

 Coordinate:

3r:19416545-19416694 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.3 -11.0 -10.9

Flybase annnotation

exon [3r_19416695_19418599_+]; five_prime_UTR [3r_19416695_19417053_+]; intron [3r_19416011_19416694_+]

No Repeatable elements found

Sense Strand Reads

--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AAGATTTGCACTTAAAGCTGACATATGTAATTGCTAAGGAAAATTTTGTTTTTGAAAAGTTTCCGTTATCAAGCTCGAAATTTCTAGCAATGGGGCAGCCCGAAATTGGTCGCTTTAAATCTAGCTTTCAAAAGCTGGCAGCACTGTCGGTGGTCACATTGTAGCCTCTTCGCATTTGACGACCCATGGAAAACTTTCAGTCTCTTGCAGGCGGCTCAGCGATACGGAAGCAACAATTGAAGCGTCCAGA
*****************************************************************************************************************************************......((((.(((.((((...(((.........)))..)))).))).))))..*********************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 M023
head
 M024
male body		 O001
Testis
 M025
embryo
 O002
Head
 SRR902008
ovaries
 SRR902009
testis
 GSM343915
embryo
 SRR553486
Makindu_3 day-old ovaries
......................................................................................................................................................................................................AGTCTCTTGCAGGCGGCT.................................. 18 0 1 3.00 3 2 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................ATACGGAAGCAACAATTGAAGC....... 22 0 1 3.00 3 0 1 2 0 0 0 0 0 0 0
...................................................................................................................................................................................................................................AAGCAACAATTGAACCGT..... 18 1 1 2.00 2 0 2 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................GCGGCTCAGCGATACGGAAGCA.................. 22 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................................................GAAGCAACAATTGAAGCG...... 18 0 1 2.00 2 1 0 0 0 0 1 0 0 0 0
..........................................................................................................................................................................................................TCTTGCAGGCGGCTC................................. 15 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................TACGGAAGCAACAATTGA.......... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..........................................................................................................................................................................CGCATTTGACGACCCATGGAA........................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................................................................................................................AGTCTCTTGCAGGCGGC................................... 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................GTCTCTTGCAGGCGGCT.................................. 17 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................AACAATTGAAGCGTCCAG. 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................................................................CGGCTCAGCGATACGGAAGC................... 20 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...........................................................................................................................................................................................................................CGATACGGAAGCAACAATTGAAGCG...... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........................................................................................................................................................ACATTGTAGCCTCTTCGCATT.......................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................ACGGAAGCAACAATTGAAGCGT..... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
.............................................................................................................................................................................................................................ATACGGAAGCAACAATTGAAGCG...... 23 0 1 1.00 1 0 0 0 0 0 0 1 0 0 0
......................................................................................................................................................................................................AGTCTCTTGCAGGCGGA................................... 17 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
......................................................................................................................................................................................................AGTCTCTTGCAGGCGGCTCAGCG............................. 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................ATACGGAAGCAACAATTG........... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................GCAGCACTGTCGGTGGTCACA............................................................................................ 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................TTTCAAAAGCTGGCAGCACTG........................................................................................................ 21 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0
.............................................................................................................................................................................................................TGCAGTCGGCTCAGCGAT........................... 18 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................AGCAACAATTGAAGCGTC.... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..................................................................................................................TTAAAGCTAGCTTTCATGAGCT.................................................................................................................. 22 3 3 0.33 1 0 0 0 0 0 0 0 0 1 0
...................................................................................................................TAAATCTAGGTTACCAAAGCT.................................................................................................................. 21 3 4 0.25 1 0 0 0 0 0 0 0 0 0 1
..........................GTAATGGCTAAGGAAA................................................................................................................................................................................................................ 16 1 7 0.14 1 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................CATTGTAGCCTCTGCTTATT.......................................................................... 20 3 9 0.11 1 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................................TGATGTCCCATGGAAAA......................................................... 17 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0
..................................TGAGGAAAATTTGGTTTTT..................................................................................................................................................................................................... 19 2 20 0.05 1 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

TTCTAAACGTGAATTTCGACTGTATACATTAACGATTCCTTTTAAAACAAAAACTTTTCAAAGGCAATAGTTCGAGCTTTAAAGATCGTTACCCCGTCGGGCTTTAACCAGCGAAATTTAGATCGAAAGTTTTCGACCGTCGTGACAGCCACCAGTGTAACATCGGAGAAGCGTAAACTGCTGGGTACCTTTTGAAAGTCAGAGAACGTCCGCCGAGTCGCTATGCCTTCGTTGTTAACTTCGCAGGTCT
***********************************************************......((((.(((.((((...(((.........)))..)))).))).))))..***************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 M023
head
 SRR553486
Makindu_3 day-old ovaries
 M024
male body		 O002
Head
 SRR618934
dsim w501 ovaries
 SRR553487
NRT_0-2 hours eggs
 SRR553488
RT_0-2 hours eggs
..................................................................................................................................................................................TGCTGGGTACCTTTTGAAAG.................................................... 20 0 1 3.00 3 3 0 0 0 0 0 0 0
....................................................................................................................................................................................................................................CCGTTGTTAACTTCGCAGGTC. 21 1 1 1.00 1 0 1 0 0 0 0 0 0
................................................................................................................................................................................ACTGCTGGGTACCTTTTGAAA..................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
.............................................................................................................................................................................TAAACTGCTGGGTACCTTTT......................................................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0
......................................................................................................................................................................................................................................GTTGTTAACTTCGCAGGTCT 20 0 1 1.00 1 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................GTCAGAGAACGTCCGCCGAGT................................ 21 0 1 1.00 1 0 1 0 0 0 0 0 0
...............................................................................TAAAGGTCGTTACCCCGTCGGGC.................................................................................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0 0 0
................................................................................................................................................................................................................TCCGCCGAGTCGCTATGCCTTC.................... 22 0 1 1.00 1 0 1 0 0 0 0 0 0
...............................................................................................................................................................................AACTGCTGGGTACCTTTTGAA...................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0
..........................CATTAACGATTCCTTTTAAAAC.......................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0
............................................................................................................................................................................GTATACTGCTGGGTAC.............................................................. 16 1 2 0.50 1 0 0 0 0 0 1 0 0
.............................................................................................................................................................................TAAACTGCTGTGTATTTTTTGA....................................................... 22 3 4 0.25 1 0 0 0 0 0 0 1 0
....................................................................................................................................................................................................AGTCAGACAACGTTCGC..................................... 17 2 6 0.17 1 0 0 1 0 0 0 0 0
....................................................................................................................................................................................................ACTCAGAGCACGTCCG...................................... 16 2 20 0.05 1 0 0 0 0 0 1 0 0
.............................................................AGGCCCTAGTTCGAGC............................................................................................................................................................................. 16 2 20 0.05 1 0 0 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:19416495-19416744 + dsi_4770 AA------------------------GATTTGCACTTAAAGC------------------------------------T-GA-CATATG---------------------TAATTGCTAAGGAAAATTTTGTTTTTGAAAAGTTTCCG-TTAT------CAA-GCTCGAAATTTCTAGCAATGGGGCAGCCCGAAATTGGTCGCTTTAAATCTAGCTTT--CAAA--------------A-------------GC---TGGCAGCACTGTCGGTGGTCACATTGTAGCCTCTTCGCATTTGACGACCCATGGAAAACTTTCAGTCTCTTGCAGGCGGCTCAGCGATACGGAAGCAACAA-TTGAAGC------GTCCAGA
droSec2 scaffold_0:20218732-20218996 + AA------------------------GATTTGCACTTAAAGC------------------------------------T-GA-CATATGTATTGAATAACTACA------TAATTGCTAAGGAAAATTTTGTTTTTGAAAAGTTTCCG-TTAT------CAA-GCTCGAAATTTCTAGCAATGGGGCAGCCCGAAATTGGTCGCTTTTAATCTAGCTTT--CAAA--------------A-------------GC---TGGCAGCACTGTCGGTGGTCACATTGTAGCCTCTTCGCATTTGACGACCCATTGAAAACTTTCAGTCTCTTGCAGGCGGCACAGCGATACGGAAGCAAGAA-TTGAAGC------GTCCAGA
dm3 chr3R:19877197-19877461 + AA------------------------GACTTGCACTTGAAGC------------------------------------T-GA-CACATGTGTTTAATAACTATA------TAATTGCTAAGGGAAATTTTGTTTTTGAAAAGTTTCCG-TTAT------CAA-GCTCGAAATTTCTAGCAATGGGGCAGCACGAAATTTGCCGCTGTAAATCTAGCTTT--CAAA--------------A-------------CC---TGGCAGCACTGTCGGTGGTCACATTGTAGCCTCTTCGCATTTGACGACCCATGGAAAACTTTCAGTCTCTTGCAGGCAGCACAGCGATACGGAAGCAACAA-TTGAAAC------GTCCAGA
droEre2 scaffold_4820:8179540-8179799 - CA------------------------GATTTGCAATTAAAGC------------------------------------TTGA-CAT-----------AACTACATAAAGTGTATTGCTAAGCAAAATTTAGTTTTTGAAAAGTTTCCG-TTAT------CAA-GTTCGAAATTTCTAACAATAGGGCAGCTCGAATTTGGTCGCTTATAATCTAGCTTT--TAAA--------------A-------------GA---TGGCAGCACTGCC-GTGGTCACATTGTAGCTTCTTCGTATTAGACGACCCATGGAAAACTTTCAGTCTCTTGCAGGCAGCACAGCGATACGGAAGCAACAA-TTGAAGC------GCCCAGA
droYak3 3R:26624152-26624414 - AA------------------------GGTTTGCAATTAAAGC------------------------------------TGGA-CATA---------TAACTACATAAAGTGTATTGCTAAGGAAAATTTAGGTTTTGAAAAGATTCCG-TTAT------CAA-GTTCGAAATTTCTAGCAGTTGGGCAGCCCGAATTTGGTCGCCCACAATCTAGCTTT--TAAA--------------A-------------GC---TGGCAGCACTGTCGGTGGTCACATTGTAGCCTCTTCGCATGTGACGGCCCATGGAAAACTTTCAGTCTCTTGCAGGCAGCACAGCGATACGGAAGCAACAA-TTGAAGC------ATCCAGA
droEug1 scf7180000409798:515230-515488 - CA------------------------GGCTTGCACTCAAAAC------------------------------------T--------------------------AAAGTTTATTGCCAAGGG--ACGTTGCTTCGGTGATGTTTCAG-TTAT---AT-ATA-ATTCAAATATTCCAGCAATTTGGCAGCACAGGTTTTGGCTTGTTTAATCTAGATTT--TAAA-GCTAAATACA-TAA-------------GC---TGGCAGCACTGGTGGTGGTCACATTGTAGCCTCTTCGCTTTTGACGACCCATGGAAAACTTTCAGTCTCTTGCAGGCAGCACAGCGATTCGGAAGCAACAA-TTAAAAC------GTCCAGA
droBia1 scf7180000302136:222760-223024 + AA------------------------GATTCGCATTAAAA-C------------------------------------ATGAACA-----ATTCAAAAACT----AAAGTTTATTGCTAGGAAACACATTGTTATTGTGATGTTTGTGGTTAA---A--CAA-ATTCGAATATTCCAGTAATTTGGCAGCCCGCGCTTTGGCGTCCGTAATCTAGCTCT--TAAA--------------A-------------GC---TGGCAGCACTGGCGGTGGTCACATTGTAGCCTCTTCGCTTCTGACGACCCATGGAAAACTTTCAGTCTCTTGCAGGCATCACAGCGATACGGAAGCAACAA-TTGGAAC------ATCCAGA
droTak1 scf7180000414373:175035-175278 - AA------------------------GATTTGCACTGAAAAC------------------------------------AAGA-GAT----ATTTCAAAACT----AGAGTTTATTGCTAGGGGAAACTTTGTTTTTGTAATA-----------------CAA-GCTTGAAAATTTAAGCAATTGGGTAGCCC----------------AATCTAGCTTC--TAAA--------------A-------------GC---TGGCAGCACTGGCAGTGGTCACATTGTAGCCTCTTCGCTTCTGACGGCCCATGGAAAACTTTCAGTCTCTTGCAGGCAGCACAGCGATACGGAAGCAACAA-TTGGAACCTCCACATCCAGA
droEle1 scf7180000491008:179041-179269 + AA------------------------GGTTTGCACTCACGAC------------------------------------A----------------------ACATTATATATATT------------------------------------AT------TAG-TTTTAAATATTGGAACAATTAGGCATCCCAGATTTTGGGGTCTAGAAAATAGCTTT--TAAATGCTAAATTCG-TCA-------------GC---TGGCAGCACTGGCAGTGGTCACACTGTAGGCTCTTCGGTTTTGACGACCCATGGCAAATTTTCAGTCTCTTGCAGGCAGCAAAGCTATACGGAAGCAACAA-TTGGAAC------GCCCAGA
droRho1 scf7180000779169:15019-15302 - AA------------------------GGTTTGCCCTCAAGAC------------------------------------A-AA-AACCAATTTTTAAGCACC----AAAG-CTATTACTAGGGA-AACTTTGTTTTTGTGATAATTATG-TTATTATATGTAG-ATTTAAATATTCCATCAATTGGGCAGCCCAGATTTTAACATTTACAAACTAGCTTT--TAAATGCTAAATTCG-TCA-------------GC---CGGCAGCACTGGCAGTGGTCACATTGTAGGCTCTTCGGTTCCGACAACCCATGGAAAACTTTCAGTCTCTTGCAGGCAGCACAGCGATACGGAAGCCACAA-TTAAAAC------GTCCAGA
droFic1 scf7180000453912:1042606-1042881 + GA------------------------GATTTGCACTTAAATCAGCAAAAAAAAAAAAAAAAAAAAACACGAAGAAACCA-GA-CTTTTT-------------------------TA-AGGGGGAGACTTTGTTTTTGTAATGTTTTTA----T----------------------CAACGCATAGACAGTTCAGATTGCGGCGTACATTAACTAGCTAC--TAAAAGCTAATTATA-TCA-------------GC---TGGCAGCACTGGCGGTGGTCACATTGTGGCCTCTTCGCTATTGCCGACCCATGGAAAACTTTCAGTCTCTTGCAGGCACCACAGCGATACGGAAGCAACAA-TTGAACC------ATCTAGA
droKik1 scf7180000302778:277600-277832 + AT----------------TTCAGATTGGTTTTCTCCTT--------------------------------------------------------------TTCTTTAAGTAC-------------------------------TTTTG-TTAT------CAAGATTTGAGTATTTGAGAAAT-------------------------TAATCTAGCTTTATTTGAGACTAAACACGATCAGCAGCGAGCAGGGGCTGTGGGCAGCACTGGCGCTGGTCACATTGCCGCCTCTTCGGTTTCGACAGCCCATGGAAAACTTTCAGTCTCTTGCAGGCAGCACAACGATTCGGAAGCAACCAATTGAAAC------CTCCACT
droAna3 scaffold_13340:7679416-7679573 - CATAATGAACTTTGTGTTTTCAGCTAGATTTGCCGCCAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-------------CA---TAGCAGCACTGGCACCGGCCGCATTGTCGTTTCTTCGGTTTCGGGAACCCATGGAAAACTTTCAGTCTCTTGTAGGCAGCACAGCGATCCGGAAGCACCAA-AGCGAGC------AGCAAAC
droBip1 scf7180000396708:1165042-1165156 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGCAGCACTGGCACCGGTCACATTGTCGTTTCTTCGGTTTCGGGAACCCATGGAAAACTTTCAGTCTCTTGTAGGCAGCACAGCGATCCGGAAGCCCCAA-ATCAAGC------AGCTAAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
AA------------------------GATTTGCACTTAAAGC------------------------------------T-GA-CATATG---------------------TAATTGCTAAGGAAAATTTTGTTTTTGAAAAGTTTCCG-TTAT------CAA-GCTCGAAATTTCTAGCAATGGGGCAGCCCGAAATTGGTCGCTTTAAATCTAGCTTT--CAAA--------------A-------------GC---TGGCAGCACTGTCGGTGGTCACATTGTAGCCTCTTCGCATTTGACGACCCATGGAAAACTTTCAGTCTCTTGCAGGCGGCTCAGCGATACGGAAGCAACAA-TTGAAGC------GTCCAGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................................................................................................................................................................AGTCTCTTGCAGGCGGCT.........................................1813.00310000000002000000
........................................................................................................................................................................................................................................................................................................................................................ATACGGAAGCAACAA-TTGAAGC------.......2213.00312000000000000000
.............................................................................................................................................................................................................................................................................................................................................GCGGCTCAGCGATACGGAAGCA.........................2212.00220000000000000000
.............................................................................................................................................................................................................................................................................................................................................................GAAGCAACAA-TTGAAGC------G......1812.00200000100001000000
.....................................................................................................................................................................................................................................................................................................................................TCTTGCAGGCGGCTC........................................1511.00100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................TACGGAAGCAACAA-TTGA................1811.00110000000000000000
.....................................................................................................................................................................................................................................................................................................CGCATTTGACGACCCATGGAA..................................................................2111.00100001000000000000
.................................................................................................................................................................................................................................................................................................................................AGTCTCTTGCAGGCGGC..........................................1711.00100000000001000000
..................................................................................................................................................................................................................................................................................................................................GTCTCTTGCAGGCGGCT.........................................1711.00100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................AACAA-TTGAAGC------GTCCAG.1811.00110000000000000000
..............................................................................................................................................................................................................................................................................................................................................CGGCTCAGCGATACGGAAGC..........................2011.00101000000000000000
......................................................................................................................................................................................................................................................................................................................................................CGATACGGAAGCAACAA-TTGAAGC------G......2511.00110000000000000000
......................................................................................................................................................................................................................................................................................ACATTGTAGCCTCTTCGCATT.................................................................................2111.00101000000000000000
..........................................................................................................................................................................................................................................................................................................................................................ACGGAAGCAACAA-TTGAAGC------GT.....2211.00100100000000000000
........................................................................................................................................................................................................................................................................................................................................................ATACGGAAGCAACAA-TTGAAGC------G......2311.00100000000000010000
.................................................................................................................................................................................................................................................................................................................................AGTCTCTTGCAGGCGGA..........................................1711.00100000000001000000
.................................................................................................................................................................................................................................................................................................................................AGTCTCTTGCAGGCGGCTCAGCG....................................2311.00100000000001000000
........................................................................................................................................................................................................................................................................................................................................................ATACGGAAGCAACAA-TTG.................1811.00100000000001000000
....................................................................................................................................................................................................................................................................GCAGCACTGTCGGTGGTCACA...................................................................................................2111.00100001000000000000
........................................................................................................................................................................................................................TTT--CAAA--------------A-------------GC---TGGCAGCACTG...............................................................................................................2111.00100000000000001000
...............................................................................................................................................................................................................................................................................................................................................................AGCAACAA-TTGAAGC------GTC....1811.00110000000000000000
droSec2
AA------------------------GATTTGCACTTAAAGC------------------------------------T-GA-CATATGTATTGAATAACTACA------TAATTGCTAAGGAAAATTTTGTTTTTGAAAAGTTTCCG-TTAT------CAA-GCTCGAAATTTCTAGCAATGGGGCAGCCCGAAATTGGTCGCTTTTAATCTAGCTTT--CAAA--------------A-------------GC---TGGCAGCACTGTCGGTGGTCACATTGTAGCCTCTTCGCATTTGACGACCCATTGAAAACTTTCAGTCTCTTGCAGGCGGCACAGCGATACGGAAGCAAGAA-TTGAAGC------GTCCAGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........................................................................................................................................................................................................................................................................................................................................................ATACGGAAGCAAGAA-TTGAAGC------G......2314.0041111
.................................................................................................................................................................................................................................................................................................................................AGTCTCTTGCAGGCGGCACAGCGA...................................2412.0020020
........................................................................................................................................................................................................................................................................................................................................................ATACGGAAGCAAGAA-TTGAAGC------.......2212.0020101
........................................................................................................................................................................................................................................................................................................................................................ATACGGAAGCAAGAA-TTG.................1812.0020020
.......................................................................................................................................................................................................................................................................................................................................TTGCAGGCGGCACAGCGATAC................................2112.0020101
.........................................................................................................................................................................................................................................................................................................................................................TACGGAAGCAAGAA-TTGA................1811.0010010
.........................................................................................................................................................................................................................................................................................................................................................TACGGAAGCAAGAA-TTGAAGC------G......2211.0010100
............................................................................................................................................................................................................................................................................................................................................GGCGGCACAGCGATACGGAAGCA.........................2311.0010001
.....................................................................................................................................................................................................................................................................................................................................TCTTGCAGGCGGCACAGCGATAC................................2311.0010100
.............................................................................................................................................................................................................................................................................................................................TTTCAGTCTCTTGCAGGCGGCA.........................................2211.0011000
...............................................................................................................................................................................................................................................................................................................................................GGCACAGCGATACGGAAGCAA........................2111.0010010
......................................................................................................................................................................................................................................................................................................................................................CGATACGGAAGCAAGAA-TTGAAGC------G......2511.0010001
..............................................................................................................................................................................................................................................................................................................................................................AAGCAAGAA-TTGAAGC------GTCCA..2111.0010100
.................................................................................................................................................................................................................................................................................................................................AGTCTCTTGCAGGCGGCACAGCG....................................2311.0010010
...........................................................................................................................................................................................................................................................................................................................................AGGCGGCACAGCGATACGGA.............................2011.0010010
...............................................................................................................................................................................................................................................................................................................................................................AGCAAGAA-TTGAAGC------GTC....1811.0011000
............................................................................................................................................................................................................................................................................................................................................................GGAAGCAAGAA-TTGAAGC------GT.....2011.0011000
.................................................................................................................................................................................................................................................................................................................................................CACAGCGATACGGAAGCAAGAA-....................2211.0010001
...................................................................................................................................................................................................................................................................................................................................................CAGCGATACGGAAGCAAGAA-TT..................2211.0010100
........................................................................................................................................................................................................................................................................................................................................................ATACGGAAGCAAGAA-TTGAAGC------GT.....2411.0010100
........................................................................................................................................................................................................................................................................................................................................................ATACGGAAGCAAGAA-TTGAAG..............2111.0010100
................................................................................................................................................................................................................................................................................................................................................................GCAAGAA-TTGAAGC------GTCCA..1911.0010001
....................................................................................................................................................................................................................................................................................................................................CTCTTGCAGGCGGCACAGCGT...................................2111.0010100
....................................................................................................................................................................................................................................................................................................................................................AGCGATACGGAAGCAAGAA-TTGAAGC------G......2711.0010100
.......................................................................................................................................................................................................................................................................................................................................................GATACGGAAGCAAGAA-TTGAAG..............2211.0010100
...............................................................................................................................................................................................................................................................................................................................................GGCACAGCGATACGGAAGC..........................1911.0010010
............................................................................................................................................................................................................................................................................................................................................GGCGGCACAGCGATACGGAAGC..........................2211.0010001
..........................................................................................................................................................................................................................................................................................................................................................ACGGAAGCAAGAA-TTGAAG..............1911.0011000
.................................................................................................................................................................................................................................................................................................................................................................CAAGAA-TTGAAGC------GTCCAG.1911.0011000
.................................................................................................................................................................................................................................................................................................................................................CACAGCGATACGGAAGCAAGAA-TTG.................2511.0010010
dm3
AA------------------------GACTTGCACTTGAAGC------------------------------------T-GA-CACATGTGTTTAATAACTATA------TAATTGCTAAGGGAAATTTTGTTTTTGAAAAGTTTCCG-TTAT------CAA-GCTCGAAATTTCTAGCAATGGGGCAGCACGAAATTTGCCGCTGTAAATCTAGCTTT--CAAA--------------A-------------CC---TGGCAGCACTGTCGGTGGTCACATTGTAGCCTCTTCGCATTTGACGACCCATGGAAAACTTTCAGTCTCTTGCAGGCAGCACAGCGATACGGAAGCAACAA-TTGAAAC------GTCCAGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
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Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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........................................................................................................................................................................................................................................................................................................ATTTGACGACCCATGGAAAACTTTCAGT........................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................AGTCTCTTGCAGGCAGCACAGCATC..................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................GGCAGCACAGCGATACGGA.............................1921.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100
......................................................................................................................................................................................................................................................................................................................................CTTGCAGGCAGCACAGCGATACGGA.............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
......................................................................................................................................................................................................................................................................................................................................CTTGCAGGCAGCACAGCG....................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................AGCAATGGGGCAGCACGA..........................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................AGCACTGTCGGTGGTCACA...................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.....................................................................................................................................................................................................................................................................................................................................TCTTGCAGGCAGCACAGCGATACG...............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................................................................................CAGTCTCTTGCAGGCAGCACAGC.....................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TATA------TAATTGCTAAGGGA................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TTGCAGGCAGCACAGCGAT..................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................GAAAACTTTCAGTCTCTTGCAGGCAGC..........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................ACTTGAAGC------------------------------------T-GA-CACATGTGT................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................TTGCTAAGGGAAATTTTGTTT......................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................CAGCACAGCGATACGGAAGCAAC.......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................GCAGCACAGCGATACGGAAGCAAC.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
............................................................................................................................................................................................................................................................................................................................................GGCAGCACAGCGATACGGAAGCAACAA-T...................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...................................................................................................................................................................................................................................................................................................................................................CAGCGATACGGAAGCAACAA-TTGAAAC------G......2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................CGGTGGTCACATTGTAGCC...........................................................................................1911.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................CAGCGATACGGAAGCAACAA-....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TTGCAGGCAGCACAGCGATACG...............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................GCAGGCAGCACAGCGATACGGAA............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TCTTGCAGGCAGCACAGCGATAC................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................GCAACAA-TTGAAAC------GTCCA..1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................AGTCTCTTGCAGGCAGCACAG......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TGCAGGCAGCACAGCGATACGGA.............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........................................................................................................................................................................................................................................................................................................................................................TACGGAAGCAACAA-TTGAAAC------GTCCAG.2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................AGCAACAA-TTGAAAC------GTCCA..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................CAGCGATACGGAAGCAACA......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................GCGATACGGAAGCAACAA-TTGAAAC------.......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....................................................................................................................................................................................................................................................................................................................................TCTTGCAGGCAGCACAGCGA...................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................AGCACAGCGATACGGAAGCAA........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................CAGTCTCTTGCAGGCAGCACAGCG....................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................GTCTCTTGCAGGCAGCACAGCGAA..................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TTGCAGGCAGCACAGCGATA.................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................CTCTTGCAGGCAGCACAGCGATA.................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...........................................................................................................................................................................................................................................................................................................................................AGGCAGCACAGCGATACG...............................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
.....................................................................................................ATA------TAATTGCTAAGGGAAATTTTGT........................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
CA------------------------GATTTGCAATTAAAGC------------------------------------TTGA-CAT-----------AACTACATAAAGTGTATTGCTAAGCAAAATTTAGTTTTTGAAAAGTTTCCG-TTAT------CAA-GTTCGAAATTTCTAACAATAGGGCAGCTCGAATTTGGTCGCTTATAATCTAGCTTT--TAAA--------------A-------------GA---TGGCAGCACTGCC-GTGGTCACATTGTAGCTTCTTCGTATTAGACGACCCATGGAAAACTTTCAGTCTCTTGCAGGCAGCACAGCGATACGGAAGCAACAA-TTGAAGC------GCCCAGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................................................................................................................................................................................................................................................................................................................................ATACGGAAGCAACAA-TTG.................1812.0020000020
................................................................................................................................................................................................................................................................................................................................................GCACAGCGATACGGAAGC..........................1811.0010100000
...............................................................................................................................................................................................................................................................................................................................................AGCACAGCGATACGGAAGC..........................1911.0010010000
..............................................................................................................................................................................................................................................................................................................................................................AAGCAACAA-TTGAAGC------GCCCAG.2211.0011000000
........................................................................................................................................................................................................................................................................................................................................................ATACGGAAGCAACAA-TTGAAGC------GCC....2511.0010000010
.......................................................................................................................................................................................................................................................................................................................................................GATACGGAAGCAACAA-TTGAAGC------G......2411.0011000000
.................................................................................................................................................................................................................................................................................................................................................CACAGCGATACGGAAGCAACAA-TTGAAG..............2811.0010000100
droYak3
AA------------------------GGTTTGCAATTAAAGC------------------------------------TGGA-CATA---------TAACTACATAAAGTGTATTGCTAAGGAAAATTTAGGTTTTGAAAAGATTCCG-TTAT------CAA-GTTCGAAATTTCTAGCAGTTGGGCAGCCCGAATTTGGTCGCCCACAATCTAGCTTT--TAAA--------------A-------------GC---TGGCAGCACTGTCGGTGGTCACATTGTAGCCTCTTCGCATGTGACGGCCCATGGAAAACTTTCAGTCTCTTGCAGGCAGCACAGCGATACGGAAGCAACAA-TTGAAGC------ATCCAGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................................................................................................................................................................................................................................................................................................................................................ATACGGAAGCAACAA-TTGAAG..............2112.00200110000000
....................................................................................................................................................................................................................................................................................................................................CTCTTGCAGGCAGCACAGC.....................................1911.00101000000000
............................................................................................................................................................................................................................................................................................................................................GGCAGCACAGCGATACGGAAGCAACA......................2611.00101000000000
...................................................................................................................................................................................................................................................................................................TTCGCATGTGACGGCCCATGG....................................................................2111.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................GCGATACGGAAGCAACAA-TTGAAGC------A......2611.00100000100000
............................................................................................................................................................................................................................................................................................................................................GGCAGCACAGCGATACGGAAGC..........................2211.00100010000000
.............................................................................................................................................................................................................................................................................................................................................................GAAGCAACAA-TTGAAGC------ATCCA..2211.00100000100000
...............................................................................................................................................................................................................................................................................................................................................AGCACAGCGATACGGAAGCAACAA-TTGA................2811.00100000010000
.....................................................................................................................................................................................................................................................................................................................................................GCGATACGGAAGCAACAA-TTGAAGC------.......2511.00100000010000
...............................................................................................................................................................................................................................................................................................................................................AGCACAGCGATACGGAAG...........................1811.00100000100000
droEug1
CA------------------------GGCTTGCACTCAAAAC------------------------------------T--------------------------AAAGTTTATTGCCAAGGG--ACGTTGCTTCGGTGATGTTTCAG-TTAT---AT-ATA-ATTCAAATATTCCAGCAATTTGGCAGCACAGGTTTTGGCTTGTTTAATCTAGATTT--TAAA-GCTAAATACA-TAA-------------GC---TGGCAGCACTGGTGGTGGTCACATTGTAGCCTCTTCGCTTTTGACGACCCATGGAAAACTTTCAGTCTCTTGCAGGCAGCACAGCGATTCGGAAGCAACAA-TTAAAAC------GTCCAGASizeHit CountTotal NormTotal
No Reads
droBia1
AA------------------------GATTCGCATTAAAA-C------------------------------------ATGAACA-----ATTCAAAAACT----AAAGTTTATTGCTAGGAAACACATTGTTATTGTGATGTTTGTGGTTAA---A--CAA-ATTCGAATATTCCAGTAATTTGGCAGCCCGCGCTTTGGCGTCCGTAATCTAGCTCT--TAAA--------------A-------------GC---TGGCAGCACTGGCGGTGGTCACATTGTAGCCTCTTCGCTTCTGACGACCCATGGAAAACTTTCAGTCTCTTGCAGGCATCACAGCGATACGGAAGCAACAA-TTGGAAC------ATCCAGASizeHit CountTotal NormTotal
No Reads
droTak1
AA------------------------GATTTGCACTGAAAAC------------------------------------AAGA-GAT----ATTTCAAAACT----AGAGTTTATTGCTAGGGGAAACTTTGTTTTTGTAATA-----------------CAA-GCTTGAAAATTTAAGCAATTGGGTAGCCC----------------AATCTAGCTTC--TAAA--------------A-------------GC---TGGCAGCACTGGCAGTGGTCACATTGTAGCCTCTTCGCTTCTGACGGCCCATGGAAAACTTTCAGTCTCTTGCAGGCAGCACAGCGATACGGAAGCAACAA-TTGGAACCTCCACATCCAGASizeHit CountTotal NormTotal
No Reads
droEle1
AA------------------------GGTTTGCACTCACGAC------------------------------------A----------------------ACATTATATATATT------------------------------------AT------TAG-TTTTAAATATTGGAACAATTAGGCATCCCAGATTTTGGGGTCTAGAAAATAGCTTT--TAAATGCTAAATTCG-TCA-------------GC---TGGCAGCACTGGCAGTGGTCACACTGTAGGCTCTTCGGTTTTGACGACCCATGGCAAATTTTCAGTCTCTTGCAGGCAGCAAAGCTATACGGAAGCAACAA-TTGGAAC------GCCCAGASizeHit CountTotal NormTotal
No Reads
droRho1
AA------------------------GGTTTGCCCTCAAGAC------------------------------------A-AA-AACCAATTTTTAAGCACC----AAAG-CTATTACTAGGGA-AACTTTGTTTTTGTGATAATTATG-TTATTATATGTAG-ATTTAAATATTCCATCAATTGGGCAGCCCAGATTTTAACATTTACAAACTAGCTTT--TAAATGCTAAATTCG-TCA-------------GC---CGGCAGCACTGGCAGTGGTCACATTGTAGGCTCTTCGGTTCCGACAACCCATGGAAAACTTTCAGTCTCTTGCAGGCAGCACAGCGATACGGAAGCCACAA-TTAAAAC------GTCCAGASizeHit CountTotal NormTotal
No Reads
droFic1
GA------------------------GATTTGCACTTAAATCAGCAAAAAAAAAAAAAAAAAAAAACACGAAGAAACCA-GA-CTTTTT-------------------------TA-AGGGGGAGACTTTGTTTTTGTAATGTTTTTA----T----------------------CAACGCATAGACAGTTCAGATTGCGGCGTACATTAACTAGCTAC--TAAAAGCTAATTATA-TCA-------------GC---TGGCAGCACTGGCGGTGGTCACATTGTGGCCTCTTCGCTATTGCCGACCCATGGAAAACTTTCAGTCTCTTGCAGGCACCACAGCGATACGGAAGCAACAA-TTGAACC------ATCTAGASizeHit CountTotal NormTotal
No Reads
droKik1
AT----------------TTCAGATTGGTTTTCTCCTT--------------------------------------------------------------TTCTTTAAGTAC-------------------------------TTTTG-TTAT------CAAGATTTGAGTATTTGAGAAAT-------------------------TAATCTAGCTTTATTTGAGACTAAACACGATCAGCAGCGAGCAGGGGCTGTGGGCAGCACTGGCGCTGGTCACATTGCCGCCTCTTCGGTTTCGACAGCCCATGGAAAACTTTCAGTCTCTTGCAGGCAGCACAACGATTCGGAAGCAACCAATTGAAAC------CTCCACTSizeHit CountTotal NormTotal
No Reads
droAna3
CATAATGAACTTTGTGTTTTCAGCTAGATTTGCCGCCAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-------------CA---TAGCAGCACTGGCACCGGCCGCATTGTCGTTTCTTCGGTTTCGGGAACCCATGGAAAACTTTCAGTCTCTTGTAGGCAGCACAGCGATCCGGAAGCACCAA-AGCGAGC------AGCAAACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................................................................................................................................................................................................................................TGTAGGCAGCACAGCGATCCG...............................2114.004200011
.........................................................................................................................................................................................................................................................................................................................................GTAGGCAGCACAGCGATCCGG..............................2113.003000012
................................................................................................................................................................................................................................................................................................................................................GCACAGCGATCCGGAAGCACC.......................2112.002200000
.....................................................................................................................................................................................................................................................................................................................................TCTTGTAGGCAGCACAGCGAT..................................2112.002000110
.......................................................................................................................................................................................................................................................................................................................................................GATCCGGAAGCACCAA-AGC.................1912.002010010
...........................................................................................................................................................................................................................................................................................................................ACTTTCAGTCTCTTGTAGGCA............................................2112.002000002
...................................................................................................................................................................................................................................................................................................................................................CAGCGATCCGGAAGCACCAA-AGCG................2411.001100000
.................................................................................................................................................................................................................................................................................................................................................CACAGCGATCCGGAAGCA.........................1811.001100000
......................................................................................................................................................................................................................................................................................................................................CTTGTAGGCAGCACAGCGATC.................................2111.001000001
................................................................................................................................................................................................................................................................................................................................................GCACAGCGATCCGGAAGCACCAA-AGC.................2611.001010000
..................................................................................................................................................................................................................................................................................................................................................ACAGCGATCCGGAAGCACCAA-AGC.................2411.001010000
..................................................................................................................................................................................................................................................................................................................................................ACAGCGATCCGGAAGCACCA......................2011.001100000
......................................................................................................................................................................................................................................................................AGCACTGGCACCGGCCGCATTGTCGT............................................................................................2611.001100000
...............................................................................................................................................................................................................................................................................................................................................AGCACAGCGATCCGGAAGCACCAA-AGC.................2711.001000010
.......................................................................................................................................................................................................................................................................................................................................TTGTAGGCAGCACAGCGATCC................................2111.001000100
..........................................................................................................................................................................................................................................................................................................................................TAGGCAGCACAGCGATCCGG..............................2011.001100000
...........................................................................................................................................................................................................................................................................................................................ACTTTCAGTCTCTTGTAGGCAGC..........................................2311.001000001
............................................................................................................................................................................................................................................................................................................................................GGCAGCACAGCGATCCGGAA............................2011.001100000
.........................................................................................................................................................................................................................................................................................................................................GTAGGCAGCACAGCGATCCG...............................2011.001100000
..................................................................................................................................................................................................................................................................................................................................................ACAGCGATCCGGAAGCACCAA-....................2111.001100000
......................................AC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-------------CA---TAGCAGCACTGGCACCGGC.......................................................................................................2411.001000001
.................................................................................................................................................................................................................................................................................................................................AGTCTCTTGTAGGCAGCACAG......................................2111.001000010
...................................................................................................................................................................................................................................................................................................................................................CAGCGATCCGGAAGCACCAA-....................2011.001100000
..................................................................................................................................................................................................................................................................................................................................GTCTCTTGTAGGCAGCACAGCGATC.................................2511.001000100
.....................................................................................................................................................................................................................................................................................................................................TCTTGTAGGCAGCACAGCGATC.................................2211.001000010
.................................................................................................................................................................................................................................................................................................................................................CACAGCGATCCGGAAGCACCA......................2111.001000001
..............................................................................................................................................................................................................................................................................................................................................CAGCACAGCGATCCGGAAG...........................1911.001100000
.......................................................................................................................................................................................................................................................................................................................................................GATCCGGAAGCACCAA-AGCG................2011.001100000
droBip1
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGCAGCACTGGCACCGGTCACATTGTCGTTTCTTCGGTTTCGGGAACCCATGGAAAACTTTCAGTCTCTTGTAGGCAGCACAGCGATCCGGAAGCCCCAA-ATCAAGC------AGCTAACSizeHit CountTotal NormTotal
No Reads

Generated: 05/18/2015 at 09:06 PM