ID:

dsi_4706

 Coordinate:

2l:9120605-9120877 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.5 -14.4 -14.2

Flybase annnotation

exon [2l_9120878_9121209_-]; CDS [2l_9120878_9121111_-]; exon [2l_9120198_9120604_-]; CDS [2l_9120198_9120604_-]; intron [2l_9120605_9120877_-]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTCATACTTGCCGCATCACCAACAAGCGGAGCCGCCGTCCATTGGCCCGGGTTCGTTTCAAATGCCAAAAGTCTAGATTTCTTTTTGTTTCACATCCGGCAGAAATGATAAGAATTGGATTGGGGATAATAATAATGTAGGGCTCAAATTATTTGATATACTGTGCCATTGTTCTGTGAATAATGTAAAAACATAGCTTAGACTGATTCTAACTGAGAAATGCATAGAACTACAGATAAATTCGCTTGCTTCAGTAAGATATGTAATTGTAGATTCACTGTAATTTGATATAAGAATAATGGAGTCTCTTAAATTTTTCACAGGGCGTCCTGTTTTACGGCTCAAACATAAAGACGGGAGACTTTCCCCTGCC
*****************************************************************************************************************.....................(((((...((((((((((((((..((.(((..((((((((...)))))))).....)))))..))))).))))).....))))...)))))**************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553486
Makindu_3 day-old ovaries
 SRR618934
dsim w501 ovaries
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 M025
embryo
 SRR553485
Chicharo_3 day-old ovaries
 O001
Testis
 M053
female body
 SRR902008
ovaries
 GSM343915
embryo
 M024
male body		 M023
head
.............................................CCCGGGTTCGTTTCCA........................................................................................................................................................................................................................................................................................................................ 16 1 2 5.50 11 0 2 4 0 5 0 0 0 0 0 0 0 0
..............................................CCGGGTTCGTAGCAAAGGC.................................................................................................................................................................................................................................................................................................................... 19 3 4 3.00 12 0 0 0 9 0 0 0 0 0 3 0 0 0
..............................................CCGGGTTCGTTTCAA........................................................................................................................................................................................................................................................................................................................ 15 0 1 3.00 3 2 0 1 0 0 0 0 0 0 0 0 0 0
...........................................GGCCCGGGTTCGTTTC.......................................................................................................................................................................................................................................................................................................................... 16 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0 0
...........................................GGCCCGGGTTCGTTT........................................................................................................................................................................................................................................................................................................................... 15 0 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................CCCGGGTTCGTTTCA......................................................................................................................................................................................................................................................................................................................... 15 0 1 2.00 2 0 0 1 0 0 0 1 0 0 0 0 0 0
......................................................................................................AAAAGATAACAATTGGATTGGT......................................................................................................................................................................................................................................................... 22 3 1 2.00 2 0 0 0 0 0 2 0 0 0 0 0 0 0
..............................................CCGGGTTCGTTTCAAA....................................................................................................................................................................................................................................................................................................................... 16 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
.............................................CCCGGGTTCGTTTCAA........................................................................................................................................................................................................................................................................................................................ 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..............ATCACCAACAAGCGGAGCCGTA................................................................................................................................................................................................................................................................................................................................................. 22 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..........................................CGGCCCGGGTTCGTTTCA......................................................................................................................................................................................................................................................................................................................... 18 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................ATTCTAACTGAGAAATGCAT.................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 1 0 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................AGGGCGTCCTGTTTTACGGCTTT............................. 23 2 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0 0
.................................................................................................................ATTGGATTGGGGATAATAATAATGTAGG........................................................................................................................................................................................................................................ 28 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0 0
..........................................TGACCCGGGTTCGTTTC.......................................................................................................................................................................................................................................................................................................................... 17 1 5 1.00 5 0 5 0 0 0 0 0 0 0 0 0 0 0
.........................................TTGGCCCGGGTTCGTTTC.......................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
..........................CGGAGCCGCCGTCCATTG......................................................................................................................................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0 0
.............................................CCCGGGTTCGTTTCCAA....................................................................................................................................................................................................................................................................................................................... 17 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0 0
...........................................GACCCGGGTTCGTTTC.......................................................................................................................................................................................................................................................................................................................... 16 1 7 0.71 5 0 5 0 0 0 0 0 0 0 0 0 0 0
...........................................GCCCCGGGTTCGTTTC.......................................................................................................................................................................................................................................................................................................................... 16 1 3 0.67 2 0 2 0 0 0 0 0 0 0 0 0 0 0
.........................................TTGACCCGGGTTCGTTAAAAA....................................................................................................................................................................................................................................................................................................................... 21 3 3 0.67 2 2 0 0 0 0 0 0 0 0 0 0 0 0
.............................................CCCGGGTTCGTTTCC......................................................................................................................................................................................................................................................................................................................... 15 1 20 0.65 13 2 2 1 0 8 0 0 0 0 0 0 0 0
.............................................................................................................................................................................................................................................................................GAGCTTTACTGTAATTTGATAT.................................................................................. 22 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................CGGCCCGGGTTCGATTCAAAA...................................................................................................................................................................................................................................................................................................................... 21 3 2 0.50 1 0 0 0 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................ACAATGTAGGGCTCTAAT................................................................................................................................................................................................................................ 18 2 2 0.50 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..................................CCGTCTATGGGCCCGGGTT................................................................................................................................................................................................................................................................................................................................ 19 2 2 0.50 1 0 1 0 0 0 0 0 0 0 0 0 0 0
............................................TCCCGGGTTCATTTCAAA....................................................................................................................................................................................................................................................................................................................... 18 2 4 0.50 2 0 0 1 0 1 0 0 0 0 0 0 0 0
..........................................CGGCCCGGGTTCGTTT........................................................................................................................................................................................................................................................................................................................... 16 1 17 0.47 8 5 0 0 0 0 0 3 0 0 0 0 0 0
......................................CGATTGACCCGGGTTCG.............................................................................................................................................................................................................................................................................................................................. 17 2 9 0.33 3 3 0 0 0 0 0 0 0 0 0 0 0 0
...............................................CGGGTTCGTAGCAAAGGC.................................................................................................................................................................................................................................................................................................................... 18 3 20 0.30 6 0 0 0 6 0 0 0 0 0 0 0 0 0
...................................................................................................................................ATAATGTAGGGGTCA................................................................................................................................................................................................................................... 15 1 4 0.25 1 0 0 1 0 0 0 0 0 0 0 0 0 0
..........................................TTGACCGGGTTCGTTTAAAA....................................................................................................................................................................................................................................................................................................................... 20 3 4 0.25 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................CCGGGTTCGATTCAA........................................................................................................................................................................................................................................................................................................................ 15 1 5 0.20 1 1 0 0 0 0 0 0 0 0 0 0 0 0
......................................GCATTGGCCCGGGTTC............................................................................................................................................................................................................................................................................................................................... 16 1 5 0.20 1 0 1 0 0 0 0 0 0 0 0 0 0 0
.........................................TTGACCCGGGTTCGTTTCAC........................................................................................................................................................................................................................................................................................................................ 20 2 5 0.20 1 0 0 0 0 0 0 0 0 0 0 1 0 0
........................................ATTGACCCGGGTTCG.............................................................................................................................................................................................................................................................................................................................. 15 1 10 0.20 2 2 0 0 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................AAATAACAATGTAGGGCTCT................................................................................................................................................................................................................................... 20 3 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0 0
..........................................CGGCCCGGGTTCGTTTC.......................................................................................................................................................................................................................................................................................................................... 17 1 16 0.19 3 0 3 0 0 0 0 0 0 0 0 0 0 0
..........................................TGACCCGGGTTCGTTT........................................................................................................................................................................................................................................................................................................................... 16 1 6 0.17 1 1 0 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................................GACATGCATAGAACT.............................................................................................................................................. 15 1 7 0.14 1 0 0 0 0 1 0 0 0 0 0 0 0 0
............................................ACCCGGGTTCGTTTC.......................................................................................................................................................................................................................................................................................................................... 15 1 8 0.13 1 1 0 0 0 0 0 0 0 0 0 0 0 0
..............................................CCGGGTTCGTTTCCA........................................................................................................................................................................................................................................................................................................................ 15 1 8 0.13 1 0 0 1 0 0 0 0 0 0 0 0 0 0
................................................................................................................................................................................................................................................TTCTCTTGCTTCAGTA..................................................................................................................... 16 1 9 0.11 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..........................................AGGCCCGGGTTCGTTT........................................................................................................................................................................................................................................................................................................................... 16 1 9 0.11 1 0 0 0 1 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................................................................................................................AGCTTTACTGTAGTTTGATA................................................................................... 20 3 10 0.10 1 0 0 0 0 0 0 0 0 0 0 0 1 0
..........................................CGGCCCGGGTTCGTT............................................................................................................................................................................................................................................................................................................................ 15 1 20 0.10 2 1 0 0 0 0 0 1 0 0 0 0 0 0
..........................................TTGACCGGGTTCGTTTAAA........................................................................................................................................................................................................................................................................................................................ 19 3 12 0.08 1 0 0 0 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................GACATAGCTTACACTGA....................................................................................................................................................................... 17 2 12 0.08 1 0 0 0 0 1 0 0 0 0 0 0 0 0
..........................................CGGCCCGGGTTCGATTCAA........................................................................................................................................................................................................................................................................................................................ 19 2 16 0.06 1 0 0 0 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................TCGGGGATAGTAATAATGC........................................................................................................................................................................................................................................... 19 3 16 0.06 1 0 0 0 0 0 0 0 0 0 0 0 1 0
.........................................TCGGCCCGGGTTCGTTTCC......................................................................................................................................................................................................................................................................................................................... 19 2 16 0.06 1 0 0 0 0 0 0 0 0 1 0 0 0 0
...............................................................................................................................AATAACAATGCAGGGCTCT................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 0 0 0 1
...........................................GGCCCGGGTTCGTTTCC......................................................................................................................................................................................................................................................................................................................... 17 1 20 0.05 1 0 1 0 0 0 0 0 0 0 0 0 0 0
..............................................CCGGGTTCGTAGCAAAGG..................................................................................................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 0 1 0 0 0 0 0 0 0 0 0
......................................CGATTGACCCGGGTTC............................................................................................................................................................................................................................................................................................................................... 16 2 20 0.05 1 1 0 0 0 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

AAGTATGAACGGCGTAGTGGTTGTTCGCCTCGGCGGCAGGTAACCGGGCCCAAGCAAAGTTTACGGTTTTCAGATCTAAAGAAAAACAAAGTGTAGGCCGTCTTTACTATTCTTAACCTAACCCCTATTATTATTACATCCCGAGTTTAATAAACTATATGACACGGTAACAAGACACTTATTACATTTTTGTATCGAATCTGACTAAGATTGACTCTTTACGTATCTTGATGTCTATTTAAGCGAACGAAGTCATTCTATACATTAACATCTAAGTGACATTAAACTATATTCTTATTACCTCAGAGAATTTAAAAAGTGTCCCGCAGGACAAAATGCCGAGTTTGTATTTCTGCCCTCTGAAAGGGGACGG
****************************************************************************************************************************************************.....................(((((...((((((((((((((..((.(((..((((((((...)))))))).....)))))..))))).))))).....))))...)))))***************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
 O001
Testis
 GSM343915
embryo
 M023
head
 M025
embryo
 SRR618934
dsim w501 ovaries
 SRR553486
Makindu_3 day-old ovaries
..............................................GGCCCAAGCGAAGTTT....................................................................................................................................................................................................................................................................................................................... 16 1 2 5.00 10 9 0 1 0 0 0 0 0 0 0
.............................................................TACGGTTTTCAGATCTAAAGAA.................................................................................................................................................................................................................................................................................................. 22 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0
............................................GGGGCCCAAGCGAAGTTT....................................................................................................................................................................................................................................................................................................................... 18 2 4 1.75 7 4 0 1 0 0 0 2 0 0 0
.............................................GGGCCCAAGCGAAGTTT....................................................................................................................................................................................................................................................................................................................... 17 1 2 1.50 3 3 0 0 0 0 0 0 0 0 0
........................................................AAGTTTAAGGCTTTCAGATC......................................................................................................................................................................................................................................................................................................... 20 2 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.............................................................TATGGTTTTCAGATCTAAAGA................................................................................................................................................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.............................................GGGCCCAAGCGAAGTT........................................................................................................................................................................................................................................................................................................................ 16 1 2 1.00 2 2 0 0 0 0 0 0 0 0 0
..............................................................ACGGTTTTCAGATCTAAAGAA.................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
..............................................GGCCCAAGCAAAGTTTACGGT.................................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.......................................................................................................................................................................................................................................TGTCTGTTTGAGCGAACGAGGTC....................................................................................................................... 23 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.....................................................GCAAAGTTTACGGTTTTCAGA........................................................................................................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
............................TTTGGCGGCAGGTAACCGGGC.................................................................................................................................................................................................................................................................................................................................... 21 2 1 1.00 1 0 1 0 0 0 0 0 0 0 0
.....................................................................................................................CTAACCCCTATTATTATTACAT.......................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
................................................................................................................................................................TACACGGTAACAAGACACTTATT.............................................................................................................................................................................................. 23 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...........................................AGGGGCCCAAGCGAAGTTT....................................................................................................................................................................................................................................................................................................................... 19 3 16 0.81 13 12 0 0 0 0 0 0 0 0 1
.............................................GGGCCCAAGCTAAGTTT....................................................................................................................................................................................................................................................................................................................... 17 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0
..............................................GGCCCAAGCTAAGTTT....................................................................................................................................................................................................................................................................................................................... 16 1 2 0.50 1 1 0 0 0 0 0 0 0 0 0
..............................................GGCCCAAGCGAAGTT........................................................................................................................................................................................................................................................................................................................ 15 1 6 0.33 2 1 0 1 0 0 0 0 0 0 0
.............................................GGGCCCAAGCGAAGT......................................................................................................................................................................................................................................................................................................................... 15 1 4 0.25 1 1 0 0 0 0 0 0 0 0 0
..........................................AAGGGGCCCAAGCGAAGTTT....................................................................................................................................................................................................................................................................................................................... 20 3 10 0.20 2 1 0 1 0 0 0 0 0 0 0
..........................................................................................................................................................................................................................CTACGTCTCTTGAGGTCTAT....................................................................................................................................... 20 3 6 0.17 1 0 0 0 0 0 0 1 0 0 0
..........................................................................................................................................................................................................................................................................................................................................................ATATTTCTGCCCTATGA.......... 17 2 7 0.14 1 0 0 0 1 0 0 0 0 0 0
........................................................AAGTTTAAGGCTTTCAGAT.......................................................................................................................................................................................................................................................................................................... 19 2 7 0.14 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................ACTATTCCTAACCTAACA.......................................................................................................................................................................................................................................................... 18 2 9 0.11 1 0 0 0 0 0 0 0 1 0 0
.................................................................................................................................................................................................................................................................................................................................................................TGGGCTCTGAAAGGGGA... 17 2 10 0.10 1 0 0 1 0 0 0 0 0 0 0
.............................................GGGCCCCAGCGAAGTTT....................................................................................................................................................................................................................................................................................................................... 17 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0
............................................GGGGCCCAAGCGAAGTT........................................................................................................................................................................................................................................................................................................................ 17 2 10 0.10 1 1 0 0 0 0 0 0 0 0 0
...........................................AGGGGCCCAAGCTAAGTTT....................................................................................................................................................................................................................................................................................................................... 19 3 11 0.09 1 1 0 0 0 0 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................................................................................................CTCTGAAAGGTGACG. 15 1 11 0.09 1 0 0 0 0 0 0 0 0 1 0
........................................................AAGTTTAAGGCTTTCAGATTT........................................................................................................................................................................................................................................................................................................ 21 3 13 0.08 1 0 0 1 0 0 0 0 0 0 0
...............................................GCCCAAGCGAAGTTT....................................................................................................................................................................................................................................................................................................................... 15 1 15 0.07 1 1 0 0 0 0 0 0 0 0 0
....................................................................................AAAAAAGTTTAGGCCGT................................................................................................................................................................................................................................................................................ 17 2 20 0.05 1 0 0 0 1 0 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 2l:9120555-9120927 - dsi_4706 TTCATACTTGCCGCATCACCAACAAGCGGAGCCGCCGTCCATTGGCCCGGGTTCGTTTC--AAATGCC-------AAAA--GTCTAGATTTC-TTTTTG-----TTTCACATCCGGCAGA------AATGAT----AAGAATTGGATTGGGGATAA-TAATAATG--------TAGGGCTCAAATTATTTGATATACTGTGCCATTG--TTCTGTGAATAATGTAAAAACATAGCTTAG-ACTGATTCTAAC-------------------------------------------TGAGAAATGCATAGAACTACAGATA--AATTCGCTTGCTTCAGTAAG-----ATATGTAATTGT--------AGATTCACTGTA-----------------ATTTGATATAA----------------------------------------------------------GAATAATGGA-------GTCTCTTAAATTTTTCACAGGGCGTCCTGTTTTACGGCTCAAACATAAAGACGGGAGACTTTCCCCTGCC
droSec2 scaffold_3:4884216-4884588 - TTCATACTTGCCGCATCACCAACAAGCGGAGCCGCCGTCCATTGGCCCGGGTTCGTTTC--AAATGCC-------AAAA--GTATAGATTTC-TTTTTG-----TTTCACATCCGGCAGA-------ATGAT----AAGAATTGGATTGGGGATAA-TAATAATG--------TAGGGCTCAAATTATTTGATATACTGTGCCATTG--TTCTGTGAATAATTTATAAACATAGCTTAGGACTGATTCTAAC-------------------------------------------TGAGAAATGCATAGAACTACAGATA--AATTCGCTTGCTTCAGTAAG-----ATATGTAATTGT--------AGATTCACTGTA-----------------ATTTGATATAA----------------------------------------------------------GAATAATGGA-------GACTCTTAAATTTTTCATAGGGCGTCCTTTTTTACGGCTCAAACATAAAGACGGGAGACTTTCCCCTGCC
dm3 chr2L:9430380-9430746 - TTCATACTTGCCGCATCACCAACAAGCGGAGCCGCCGTCCGTGGGCCCGGGTTCGTTTC--AAAAACC-------AAAA--GTCTAGATTTC-TTTTTG-----TTTCACATCCGGCAGA------CATGAT----AAGAATTGGATTGAAAATAA-TAATAATA--------TAGGGCTCCAACTGTTTGAGATACTGTACCATAG--TTCTGAAAAATATGTAAACACATAGCTTAG-----------AC-------------------------------------------TGAGAAATGCATAGCACTGCAGATACAAATTCGCTTACTTCAGTAAG-----ATATGTAATTGT--------AGATTCATTGTA-----------------ATTTGATATAA----------------------------------------------------------TAATAACGGAAT-----GTCTCTTACATTTTTCACAGGGCGTCCTGTTTTACGGCTCAAACATAAAGACGGGAGACTTTCCCCTGCC
droEre2 scaffold_4929:10039584-10039937 - TTCACACTTGCCGCATCTCCAACAAGCGCAGCCGCCTTCCGATGGCCCGGGTTCGTTTA--TTATGCC--------AAA--GTCTCGATTTC-CTTCTG-----CTTCACATCCGGCACA------CTTGAT----AAGAATTAGATTGGGAAT----AATAATA--------CAGAGCTTCAATTCTTTGAGATGTT-TGCCACTG--TTC------------------------------------CAAG-------------------------------------------TGAGATATCCGTAATGCTATTC--A--TGTTAGTTGGGCTCCGTAATATAATGTTGCTAATTGT--------AGATTCACTGTACTTATTCTGTTGGAGCAAGTTGATATAA----------------------------------------------------------GAATAACATAAT-----ACCTCCTACAT-ATTTACAGGGCGTATTGTTTTACGGCTCAAATATAAAGCCTGGAGACTTTCCCCTGCC
droYak3 2L:12103308-12103649 - TTCACACATGCCGCATCACCAACAGGCGCAGTCGCCTTCCGATGGCCCGGGTTCGTTTC--TAAT-CC-------AAAAGAG--TCGAATGT-CTTATT-----TTTCACATCCGGCAAA------CTTGAT----AAGAATTGGATTATGAGT----AATAATA--------TAGAGCTTAAA---TTTGAGATGCCGTTCCACTA--CTCCGTGATTAATGTAAAAACATAGCTTGGAACTATTTC---------------------------------------------------------------------ATA--TGTTAGTTTGGCTCTGTAAT-----GTTGCTAATTGT--------AGATTCATTGTA-----------------ATTTGATATGA----------------------------------------------------------GAATAACATAAT-----ACCTCTTACAT-TTTCACAGGGCGTATTGTTTTACGGCTCAAATATAAAGACGGGCGACTTTCCCTTGCC
droEug1 scf7180000406904:454833-455221 - TAAACACTTGCCGCATCACCAACAAGCGCAGCCGTCTTCCACAGGCCCGGGTTTGTAGA--TAGATATA------ATAG--AAATATAATT----ATTA-----CTCCACATCCGGCAGA------AATGAT----AAGAATA----------------------TATGTAAA---TAATATGATTTTTTGAGACGCTATTTCAGAG-GGTA------------------------------------CAAGT------------------TAGGCCTTATGCTCTAAAAATAGCTGG----------------------------------TC-ATGTAACTTAATTTTAATAATTTTCTTCCTAAAAATCTACTGTATTTG-----TTGG---------TTATAAGAACTACTGATAAGGAACTTAATTTGTAAAGAACTTAATTTATCTAAGATTTACTTACAACCAATGTAAT-----ATCACTTATACATTCAACAGGGCGTCCTATTTTATGGGTCCAATATGAAGACTGGTGATTTCCCTGTTCC
droBia1 scf7180000302408:3760276-3760388 + TCCACACTTGCCGCATCACCAACAGGCGCAGCCGGCTTCCGATGTCCCGGGTGTGTGAA--TGTTGCC-------AAGA--GTCTTTGTTT----TCTA-----CTCCACATCCGGCAGG-----TCTTGAT----AAGAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415702:49351-49466 + TCCACACGTGCCGCATTTCCAACAAGCGCAGCCGCCTGCCGATGTCCCGGGTTCGTGAA--TATTGCCTTG----AAAA--GTCTAGATTTC----TTG-----CTCCACATCCGGCAGA------AATGAT----AAGAATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491186:2398412-2398579 - TCAACACATGCCGCATCACCAACCAGCGCCACCGCCTTCCGATGTCCCGGGTTCGTGAA--TAATGCCAAAATACATAA--GTCTCAATTTC---TATG-----TCCCACATCCGGCCGG---GCTCTTGAT----AAGAAT------------AA-TAATAATATGTACAAATGTTGCTCAGATTATCTGGGAGGCTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000778312:10448-10609 - TCAACACTTGCCGCATCACCAACAAGCGACACCGCCTTCCGATGTCCCGGGTTCGTGAA--CAATGCTA------AAAA--ATCTCGAATTC----TAA-----GTCCACATCCGGCAGG---GCTCTTGCTTATCAAGAGT------------AAGCAGTAATA--------TATTTTACAGATTATTTAAGTAGCTGTTCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454076:239402-239554 + TCAACACGTGTCGCATCACCAACAAACGCAGTCGTCTTCCAATGGCTCGGGTTCGTCTGAATAAATAC-------AAAA--GTCTAAATTTC----TAA-----GTCGACATCCGGCTGT---TTTCGTGAT----AAGAAT------------AA-GAATATTA--------TGGTGATCCAATTCGCTGAGATGCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302679:1328865-1328956 - TGGACACGTGTCGCATCAGCAACAAGAGGAGCCGCCTGCCGATGGCCCGGGTTCGTACT----------------------GTGTAGATTGTTCCCCTT-----ATCCGCATCCGGCGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_12943:783916-784198 - TATATACTTGTCGCGTTACCAACAAGCGGAACCGCCTCAAATCGTCCAGGGTTTGTCCT--AA-------------AAC--GTTTTAATCTT----TAATTGGGTAGCTCATCCGGCAGA---GAACTTGAT----AAGAACA----------------------CT-------------------------------------TAGAGGGA------------------------------------TGTGTAGTATGTATATTTTTGTGGGGATTTTGTGTTCACAATGTAGCTGAAACAT-------------------------------------------------------------------TCTACTGAA-----------------A-TTTATATCA---GTACTAA------------------------------------------------GA----AGAAATATAT-----TATATG-TTTTCTTAGGGAGTGCTTTTCTACGGCTCGGCTTTGGATGTTGGAGATTTCCCACTGCC
droBip1 scf7180000396728:2341137-2341376 + TATACACTTGTCGCATCACCAACAAGCGGAAACGCTTGCGAACATCCAGGGTTTGTGTT--AAA-----------------------------------------ACCTCATCCGGCTGA---GATTTTGAT----AAGAATA----------------------CT-------------------------------------TGG-GGGA------------------------------------CGTGTAGTATATA--------TGGGGGCATTATGTTCAAATTAAAGCTGAGATAGT-----------------------------------------------------------------------------------------------------CA---GTACTGA------------------------------------------------AA----ATAAATATATTATATACA-TA-TTTTCGCAGGGAGTGCTATTCTACGGCTCGGATTTGGATGTTGGAGACTTCCCACTGCC
dp5 4_group1:871415-871488 + AATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAATTTC-TA-ATTTTTCAGGCTGTTCTCTTCTATGGAACGGCTCTAAAGACGGGGGACTTTCCCCTGCC
droPer2 scaffold_5:4339721-4339794 - AATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAATTTC-TA-ATTTTTCAGGCTGTTCTCTTCTATGGAACGGCTCTAAAGACGGGGGACTTTCCCCTGCC
droWil2 scf2_1100000004585:7528897-7529037 + TACACAAATGTCGATTCACCAACAATCGCCAGCGGTTGTCTCAAGCCATGGTGAGTCAA----AATCC-------AAAA--A------------------------CCGGATTCATCTAAATATTTTGAGAT----AAGAAT------------TT-GCTTAATA--------TA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCA---ATGCCGG------------------------------------------------AA----GCAACCATAA-----------------------------------------------------------------TATTTG
droVir3 scaffold_12723:5340204-5340260 + TTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGGTATACTGTTCTATGGCTCCAATATGAAGCCGCACGACTTTCCAATGCC
droMoj3 scaffold_6500:16331078-16331137 - TC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTACAGGGGATTCTCTTCTATGGCTCCAACTTGAAAACCTTTGACTATCCACTGCC
droGri2 scaffold_15126:2115673-2115785 + TCGATACTTGCCGCGTCACCAACAATCACAAACGTCTGCACGAGGCGCGCGTTCGTAGC--AAGA-------AATTTGG--CTTGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACTTC-CA-AATTTTAAGCATTTTTCC-----------------------------TTTCGCTTTACA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTCATACTTGCCGCATCACCAACAAGCGGAGCCGCCGTCCATTGGCCCGGGTTCGTTTC--AAATGCC-------AAAA--GTCTAGATTTC-TTTTTG-----TTTCACATCCGGCAGA------AATGAT----AAGAATTGGATTGGGGATAA-TAATAATG--------TAGGGCTCAAATTATTTGATATACTGTGCCATTG--TTCTGTGAATAATGTAAAAACATAGCTTAG-ACTGATTCTAAC-------------------------------------------TGAGAAATGCATAGAACTACAGATA--AATTCGCTTGCTTCAGTAAG-----ATATGTAATTGT--------AGATTCACTGTA-----------------ATTTGATATAA----------------------------------------------------------GAATAATGGA-------GTCTCTTAAATTTTTCACAGGGCGTCCTGTTTTACGGCTCAAACATAAAGACGGGAGACTTTCCCCTGCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................CCGGGTTCGTTTC--AA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1513.00300000002010000000
...........................................GGCCCGGGTTCGTTTC--...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1612.00200000000002000000
...........................................GGCCCGGGTTCGTTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1512.00200000001000001000
.............................................CCCGGGTTCGTTTC--A..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1512.00200000010010000000
..............................................CCGGGTTCGTTTC--AAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000001000000000
.............................................CCCGGGTTCGTTTC--AA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000000010000000
..............ATCACCAACAAGCGGAGCCGTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000001000
....................................................................................................................................................................................................................................................ATTCTAAC-------------------------------------------TGAGAAATGCAT.....................................................................................................................................................................................................................................................2011.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGCGTCCTGTTTTACGGCTTT.............................2311.00100000000000001000
............................................................................................................................................ATTGGATTGGGGATAA-TAATAATG--------TAGG.......................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
.........................................TTGGCCCGGGTTCGTTTC--...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
..........................CGGAGCCGCCGTCCATTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
.............................................CCCGGGTTCGTTTC--C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.651300000002812000000
...........................................GGCCCGGGTTCGTTTC--C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.05100000000001000000
droSec2
TTCATACTTGCCGCATCACCAACAAGCGGAGCCGCCGTCCATTGGCCCGGGTTCGTTTC--AAATGCC-------AAAA--GTATAGATTTC-TTTTTG-----TTTCACATCCGGCAGA-------ATGAT----AAGAATTGGATTGGGGATAA-TAATAATG--------TAGGGCTCAAATTATTTGATATACTGTGCCATTG--TTCTGTGAATAATTTATAAACATAGCTTAGGACTGATTCTAAC-------------------------------------------TGAGAAATGCATAGAACTACAGATA--AATTCGCTTGCTTCAGTAAG-----ATATGTAATTGT--------AGATTCACTGTA-----------------ATTTGATATAA----------------------------------------------------------GAATAATGGA-------GACTCTTAAATTTTTCATAGGGCGTCCTTTTTTACGGCTCAAACATAAAGACGGGAGACTTTCCCCTGCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................ATGAT----AAGAATTGGATTGGGGATAA-TA.........................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000
dm3
TTCATACTTGCCGCATCACCAACAAGCGGAGCCGCCGTCCGTGGGCCCGGGTTCGTTTC--AAAAACC-------AAAA--GTCTAGATTTC-TTTTTG-----TTTCACATCCGGCAGA------CATGAT----AAGAATTGGATTGAAAATAA-TAATAATA--------TAGGGCTCCAACTGTTTGAGATACTGTACCATAG--TTCTGAAAAATATGTAAACACATAGCTTAG-----------AC-------------------------------------------TGAGAAATGCATAGCACTGCAGATACAAATTCGCTTACTTCAGTAAG-----ATATGTAATTGT--------AGATTCATTGTA-----------------ATTTGATATAA----------------------------------------------------------TAATAACGGAAT-----GTCTCTTACATTTTTCACAGGGCGTCCTGTTTTACGGCTCAAACATAAAGACGGGAGACTTTCCCCTGCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................................................................................................TTCAGTAAG-----ATATGTAATTGT--------AGATT....................................................................................................................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCACAGGGCGTCCTGTTTTACGGC................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000100000
..............ATCACCAACAAGCGGAGCCGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGGGCGTCCTGTTTTACGGC................................2412.0020000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...........................................GGCCCGGGTTCGTTTC--AC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................C-------------------------------------------TGAGAAATGCATAGCACTGCAGA..........................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCACAGGGCGTCCTGTTTTACGGCT...............................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTTACATTTTTCACAGGGCGTCCTG.........................................2712.0020000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................................................TTCAGTAAG-----ATATGTAATTGT--------AGATTC...................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACAGGGCGTCCTGTTTTACGGC................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTACATTTTTCACAGGGCG..............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...............................................................................................................................................................................................................................TAAACACATAGCTTAG-----------AC-------------------------------------------TGAGAAAT.........................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................AGA------CATGAT----AAGAATTGGATTGA..................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TATAA----------------------------------------------------------TAATAACGGAAT-----GTCTCTTACA............................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CACCAACAAGCGGAGCCGCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGGGCGTCCTGTTTTACGGCA...............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................ACATCCGGCAGA------CATGAT----AAGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGTTTTACGGCTCAAACATAAAGA...................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GCGGAGCCGCCGTCCGTGGGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGGGCGTCCTGTTTTACGGCT...............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................TATGTAATTGT--------AGATTCA..................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------------------------------------------TAATAACGGAAT-----GTCTCT................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.............................................CCCGGGTTCGTTTC--AT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CGCATCACCAACAAGCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................GATACAAATTCGCTTACTTCAGTAAG-----.............................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATCACCAACAAGCGGAGCCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000
......................CAAGCGGAGCCGCCGTCCGTGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................A--------TAGGGCTCCAACTGTTTGAG.......................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CCGCATCACCAACAAGCGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TCACCAACAAGCGGAGCCGCCGTCCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ACCAACAAGCGGAGCCGCCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................CGGAGCCGCCGTCCGTGGGCCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................................................................................................TCAGTAAG-----ATATGTAATTGT--------A........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................ATAA----------------------------------------------------------TAATAACGGAAT-----GTCTCT................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CACCAACAAGCGGAGCCGCCGTCCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGGGCGTCCTGTTTTACGGCT...............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACAGGGCGTCCTGTTTTACGGCTC..............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TAG-----------AC-------------------------------------------TGAGAAATGCATAGCACT...............................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACATTTTTCACAGGGCG..............................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTCACAGGGCGTCCTGTTTTACGGC................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACATAAAGACGGGAGACTTTCCCCT...2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................TCACATCCGGCAGA------CATGAT----AAGAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTTACATTTTTCACAGGGCGTCCT..........................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACAGGGCGTCCTGTTTTACGGCTC..............................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................AC-------------------------------------------TGAGAAATGCATAGCACTGCAGA..........................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GCGGAGCCGCCGTCCGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTACGGCTCAAACATAAAGACGGGA..............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................TAA-TAATAATA--------TAGGGCTCCAACTGT............................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................CAGTAAG-----ATATGTAATTGT--------.........................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
............................................GCCCGGGTTCGTTTC--ATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ACAAGCGGAGCCGCCGTCCGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGGGCGTCCTGTTTTACGGC................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................TTGAGATACTGTACCATAG--TT.....................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGCGTCCTGTTTTACGGCTCAAACA.........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATAAAGACGGGAGACTTTCCCCT...2611.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TAG-----------AC-------------------------------------------TGAGAAATGCATAGCACTGCA............................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................GGCCCGGGTTCGTTTC--C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.951900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002161000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................GGCCCGGGTTCGTTTC--TC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.70140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003001051001100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................CCCGGGTTCGTTTC--ATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1740.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................GGCCCGGGTTCGTTTC--CT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100001001310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TTCACACTTGCCGCATCTCCAACAAGCGCAGCCGCCTTCCGATGGCCCGGGTTCGTTTA--TTATGCC--------AAA--GTCTCGATTTC-CTTCTG-----CTTCACATCCGGCACA------CTTGAT----AAGAATTAGATTGGGAAT----AATAATA--------CAGAGCTTCAATTCTTTGAGATGTT-TGCCACTG--TTC------------------------------------CAAG-------------------------------------------TGAGATATCCGTAATGCTATTC--A--TGTTAGTTGGGCTCCGTAATATAATGTTGCTAATTGT--------AGATTCACTGTACTTATTCTGTTGGAGCAAGTTGATATAA----------------------------------------------------------GAATAACATAAT-----ACCTCCTACAT-ATTTACAGGGCGTATTGTTTTACGGCTCAAATATAAAGCCTGGAGACTTTCCCCTGCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads
droYak3
TTCACACATGCCGCATCACCAACAGGCGCAGTCGCCTTCCGATGGCCCGGGTTCGTTTC--TAAT-CC-------AAAAGAG--TCGAATGT-CTTATT-----TTTCACATCCGGCAAA------CTTGAT----AAGAATTGGATTATGAGT----AATAATA--------TAGAGCTTAAA---TTTGAGATGCCGTTCCACTA--CTCCGTGATTAATGTAAAAACATAGCTTGGAACTATTTC---------------------------------------------------------------------ATA--TGTTAGTTTGGCTCTGTAAT-----GTTGCTAATTGT--------AGATTCATTGTA-----------------ATTTGATATGA----------------------------------------------------------GAATAACATAAT-----ACCTCTTACAT-TTTCACAGGGCGTATTGTTTTACGGCTCAAATATAAAGACGGGCGACTTTCCCTTGCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEug1
TAAACACTTGCCGCATCACCAACAAGCGCAGCCGTCTTCCACAGGCCCGGGTTTGTAGA--TAGATATA------ATAG--AAATATAATT----ATTA-----CTCCACATCCGGCAGA------AATGAT----AAGAATA----------------------TATGTAAA---TAATATGATTTTTTGAGACGCTATTTCAGAG-GGTA------------------------------------CAAGT------------------TAGGCCTTATGCTCTAAAAATAGCTGG----------------------------------TC-ATGTAACTTAATTTTAATAATTTTCTTCCTAAAAATCTACTGTATTTG-----TTGG---------TTATAAGAACTACTGATAAGGAACTTAATTTGTAAAGAACTTAATTTATCTAAGATTTACTTACAACCAATGTAAT-----ATCACTTATACATTCAACAGGGCGTCCTATTTTATGGGTCCAATATGAAGACTGGTGATTTCCCTGTTCCSizeHit CountTotal NormTotal
No Reads
droBia1
TCCACACTTGCCGCATCACCAACAGGCGCAGCCGGCTTCCGATGTCCCGGGTGTGTGAA--TGTTGCC-------AAGA--GTCTTTGTTT----TCTA-----CTCCACATCCGGCAGG-----TCTTGAT----AAGAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TCCACACGTGCCGCATTTCCAACAAGCGCAGCCGCCTGCCGATGTCCCGGGTTCGTGAA--TATTGCCTTG----AAAA--GTCTAGATTTC----TTG-----CTCCACATCCGGCAGA------AATGAT----AAGAATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TCAACACATGCCGCATCACCAACCAGCGCCACCGCCTTCCGATGTCCCGGGTTCGTGAA--TAATGCCAAAATACATAA--GTCTCAATTTC---TATG-----TCCCACATCCGGCCGG---GCTCTTGAT----AAGAAT------------AA-TAATAATATGTACAAATGTTGCTCAGATTATCTGGGAGGCTGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TCAACACTTGCCGCATCACCAACAAGCGACACCGCCTTCCGATGTCCCGGGTTCGTGAA--CAATGCTA------AAAA--ATCTCGAATTC----TAA-----GTCCACATCCGGCAGG---GCTCTTGCTTATCAAGAGT------------AAGCAGTAATA--------TATTTTACAGATTATTTAAGTAGCTGTTCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TCAACACGTGTCGCATCACCAACAAACGCAGTCGTCTTCCAATGGCTCGGGTTCGTCTGAATAAATAC-------AAAA--GTCTAAATTTC----TAA-----GTCGACATCCGGCTGT---TTTCGTGAT----AAGAAT------------AA-GAATATTA--------TGGTGATCCAATTCGCTGAGATGCTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TGGACACGTGTCGCATCAGCAACAAGAGGAGCCGCCTGCCGATGGCCCGGGTTCGTACT----------------------GTGTAGATTGTTCCCCTT-----ATCCGCATCCGGCGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
TATATACTTGTCGCGTTACCAACAAGCGGAACCGCCTCAAATCGTCCAGGGTTTGTCCT--AA-------------AAC--GTTTTAATCTT----TAATTGGGTAGCTCATCCGGCAGA---GAACTTGAT----AAGAACA----------------------CT-------------------------------------TAGAGGGA------------------------------------TGTGTAGTATGTATATTTTTGTGGGGATTTTGTGTTCACAATGTAGCTGAAACAT-------------------------------------------------------------------TCTACTGAA-----------------A-TTTATATCA---GTACTAA------------------------------------------------GA----AGAAATATAT-----TATATG-TTTTCTTAGGGAGTGCTTTTCTACGGCTCGGCTTTGGATGTTGGAGATTTCCCACTGCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TATACACTTGTCGCATCACCAACAAGCGGAAACGCTTGCGAACATCCAGGGTTTGTGTT--AAA-----------------------------------------ACCTCATCCGGCTGA---GATTTTGAT----AAGAATA----------------------CT-------------------------------------TGG-GGGA------------------------------------CGTGTAGTATATA--------TGGGGGCATTATGTTCAAATTAAAGCTGAGATAGT-----------------------------------------------------------------------------------------------------CA---GTACTGA------------------------------------------------AA----ATAAATATATTATATACA-TA-TTTTCGCAGGGAGTGCTATTCTACGGCTCGGATTTGGATGTTGGAGACTTCCCACTGCCSizeHit CountTotal NormTotal
No Reads
dp5
AATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAATTTC-TA-ATTTTTCAGGCTGTTCTCTTCTATGGAACGGCTCTAAAGACGGGGGACTTTCCCCTGCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGGAACGGCTCTAAAGACGGG...............2411.0010000000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTATGGAACGGCTCTAAAGACGG................2411.0010000000100
droPer2
AATAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAATTTC-TA-ATTTTTCAGGCTGTTCTCTTCTATGGAACGGCTCTAAAGACGGGGGACTTTCCCCTGCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
TACACAAATGTCGATTCACCAACAATCGCCAGCGGTTGTCTCAAGCCATGGTGAGTCAA----AATCC-------AAAA--A------------------------CCGGATTCATCTAAATATTTTGAGAT----AAGAAT------------TT-GCTTAATA--------TA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCA---ATGCCGG------------------------------------------------AA----GCAACCATAA-----------------------------------------------------------------TATTTGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
TTTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGGTATACTGTTCTATGGCTCCAATATGAAGCCGCACGACTTTCCAATGCCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGAAGCCGCACGACT..........1811.001000000000100000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTGTTCTATGGCTCCA............................1911.001000000000000010000000000000000000000000000000000000000000000000
droMoj3
TC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTACAGGGGATTCTCTTCTATGGCTCCAACTTGAAAACCTTTGACTATCCACTGCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
TCGATACTTGCCGCGTCACCAACAATCACAAACGTCTGCACGAGGCGCGCGTTCGTAGC--AAGA-------AATTTGG--CTTGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACTTC-CA-AATTTTAAGCATTTTTCC-----------------------------TTTCGCTTTACASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/19/2015 at 02:02 AM