ID:dsi_4625 |
Coordinate:3r:4133426-4133583 + |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
|
|
|
| -16.2 | -15.8 | -15.8 | -15.7 |
 |
 |
 |
 |
intergenic
No Repeatable elements found
|
AGCTCAATGAACTTACCCACGATGTCTAGGGATACTGTAGTTGGCATAAGGTGTACTTTAGAGACGAGCGACAGTGGAGCATTCAATCATAATAAATACAAAGAAAATACATTAATTGGAAAAACTTTTTTATCAGCTTCTCATTTTCCATCGCTTATGTCTACATTATGTAACCCATACTAACCTTTAACGTTTCCACTCTTTTCAGGAAAAATATTCGAGTACGTTGTCAGCCAGAAGGGCCACGTCCTGCTGTTG
**************************************************.....((.....((.(((....((((((((.......((((((....((((((.............(((((((....................)))))))...))).)))....)))))).....................))).)))))))).))))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR902009 testis |
M053 female body |
SRR553487 NRT_0-2 hours eggs |
SRR553488 RT_0-2 hours eggs |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|---|---|
| .........................CTAGGGATACTGTAGTTGGCA.................................................................................................................................................................................................................... | 21 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................GGAGACGAGCGACAGTGGAG................................................................................................................................................................................... | 20 | 1 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| .........................................................................................................AATACATTAATTGGA.......................................................................................................................................... | 15 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 |
| ............TTACTCACGACGTCTAGGGATACTGT............................................................................................................................................................................................................................ | 26 | 2 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 |
| ....................GATGTCTAGGGATACTGTAGTTGGCA.................................................................................................................................................................................................................... | 26 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| .............TACCCACAATGTCTAGGGATACTG............................................................................................................................................................................................................................. | 24 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 0 | 1 |
| .......................GTCTAGGGATACTGTAGTTGGCATA.................................................................................................................................................................................................................. | 25 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
|
TCGAGTTACTTGAATGGGTGCTACAGATCCCTATGACATCAACCGTATTCCACATGAAATCTCTGCTCGCTGTCACCTCGTAAGTTAGTATTATTTATGTTTCTTTTATGTAATTAACCTTTTTGAAAAAATAGTCGAAGAGTAAAAGGTAGCGAATACAGATGTAATACATTGGGTATGATTGGAAATTGCAAAGGTGAGAAAAGTCCTTTTTATAAGCTCATGCAACAGTCGGTCTTCCCGGTGCAGGACGACAAC
**************************************************.....((.....((.(((....((((((((.......((((((....((((((.............(((((((....................)))))))...))).)))....)))))).....................))).)))))))).))))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553487 NRT_0-2 hours eggs |
SRR553488 RT_0-2 hours eggs |
M024 male body |
SRR618934 dsim w501 ovaries |
SRR553485 Chicharo_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................................................................................................CAGTCGGTCTTCCCGGTGCAGGACG..... | 25 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 |
| ................................................................................................ATGTCTCCTTTATGTAATTTACCT.......................................................................................................................................... | 24 | 3 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| ............................................................................................................................................................................................TTGCAAATGTGTGAAAGGTCC................................................. | 21 | 3 | 2 | 1.00 | 2 | 2 | 0 | 0 | 0 | 0 |
| ....................................................................................................................................................................................................GTGAGACAAGTCTTTTTTATAT........................................ | 22 | 3 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...............................................................................................................................................................................................................................................CTCGGGGCAGGACGACAA. | 18 | 2 | 4 | 0.25 | 1 | 0 | 0 | 0 | 1 | 0 |
| .............................................................................................................................................................................................................................CATGCTACAGTGGGTCTT................... | 18 | 2 | 5 | 0.20 | 1 | 0 | 1 | 0 | 0 | 0 |
| ..................................................................................................................................................................................................................................................AGTGCAGGACGACAA. | 15 | 1 | 7 | 0.14 | 1 | 0 | 0 | 0 | 0 | 1 |
| .............................................................................TCGTAAGTCAGTATTAG.................................................................................................................................................................... | 17 | 2 | 14 | 0.07 | 1 | 1 | 0 | 0 | 0 | 0 |
| ...........................................................................................................................................GAGTAAAACGTAGCG........................................................................................................ | 15 | 1 | 15 | 0.07 | 1 | 0 | 0 | 0 | 1 | 0 |
Generated: 04/23/2015 at 08:40 PM