ID:

dsi_4311

 Coordinate:

3l:165911-166060 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-27.0 -26.9 -26.9

Flybase annnotation

CDS [3l_158940_167000_-]; exon [3l_158210_167000_-]

No Repeatable elements found

Sense Strand Reads

##########################################################################################################################################################################################################################################################
TAGTTCCTCAGGAAGTGATTCGGGTAGTGAAAGCGGTAGCTCTAGCGCGGGTAGCGGAGTCTCCAAGCGAAAGTCTTCCTCAGGAAGTCCCCTTAAAAAGCAAAGCTACGCTCGGTCCGTTGAGCAGCGGCAAAAACAGCGGCAGAGACGTCAAAGTGAAGCAGTTGCGGGTGCGTCTGCCGCGTATCCGGATTCCAGGTCTGCAAGCAGCTCCAGCGACGGTGAAGACGAGCGATGTAGAAACCGCCAG
***************************************************************************************************((...(((..(((((......)))))))).)).......((((((..(((((....((((.....))))....))))))))))).****************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M024
male body		 SRR618934
dsim w501 ovaries
 M053
female body
 SRR553488
RT_0-2 hours eggs
 M025
embryo
 SRR902009
testis
 SRR553486
Makindu_3 day-old ovaries
 M023
head
 SRR553487
NRT_0-2 hours eggs
 SRR553485
Chicharo_3 day-old ovaries
.................................................................................................................................................................CAGTTGGGAGAGCGTCTGCCG.................................................................... 21 3 3 3.67 11 9 0 1 0 0 0 0 1 0 0
.................................................................................................................................................................CAGTTGGGAGAGCGTCTGCC..................................................................... 20 3 20 3.05 61 47 0 2 0 1 0 0 11 0 0
...............................................................................................................................................................................................................................GAAGACGAGCGATGTAGAAAC...... 21 0 1 3.00 3 3 0 0 0 0 0 0 0 0 0
..................................................................................................................................................................AGTTGGGAGAGCGTCTGCCG.................................................................... 20 3 7 1.14 8 8 0 0 0 0 0 0 0 0 0
...............................................................................................................................................................................................................................GAAGACGAGCGATGTAGAAACCGCC.. 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................GCAAAGCTACGCTCGGTCCGTTGAGCAGC.......................................................................................................................... 29 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0
.........................................CTAGCGCGGGTAGCGGA................................................................................................................................................................................................ 17 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...................................................................................................................................................................GTTGCGGGTGCGTCTGCCGCG.................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0
...............................................................................................................TCGGTCCGTTGAGCAGCGGTTT..................................................................................................................... 22 3 1 1.00 1 0 0 0 0 0 1 0 0 0 0
.............................................................................................................................................................................................................................GTGAAGACGAGCGATGTAGAAAC...... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.........................................................................................................................................AGCGGCAGAGACGTCAAAGTGAAGCA....................................................................................... 26 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0
....................CGGGTAGTGAAAGCGGTA.................................................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0
.............................................................................................................................................................................................................................GTGAGGACGAGCGATGTAGAAAC...... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0
.................................................................................................................................................................................................TCAAGGTCGGGAAGCAGCTC..................................... 20 3 7 0.71 5 0 0 0 0 0 0 5 0 0 0
..............................................................................................................................................................................GTCGGCCGCGTAGCCGGA.......................................................... 18 2 2 0.50 1 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................................................CAGTTGGGGGAGCGTCTGC...................................................................... 19 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................GTTGGGGGAGCGTCTGCC..................................................................... 18 2 3 0.33 1 1 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................GTTGGGAGAGCGTCTGCCG.................................................................... 19 3 19 0.26 5 5 0 0 0 0 0 0 0 0 0
........................................................................................................GCTACGCTCAGTCGGTAGAG.............................................................................................................................. 20 3 4 0.25 1 0 1 0 0 0 0 0 0 0 0
...................TCGGGTAGTGAGGGCCGT..................................................................................................................................................................................................................... 18 3 20 0.20 4 0 0 4 0 0 0 0 0 0 0
..........................................................................................................................................TCGGCAGAGACGTTAAA............................................................................................... 17 2 10 0.10 1 0 0 0 0 0 0 1 0 0 0
.............................................................................................................GCTCAGTCGGTTGAGCAGAG......................................................................................................................... 20 3 10 0.10 1 0 0 0 1 0 0 0 0 0 0
............................................................CTCCAAGTGAAGGTCTTCTT.......................................................................................................................................................................... 20 3 11 0.09 1 0 0 0 0 0 0 0 0 1 0
......................................................................AAGTTTTCCTCAGGA..................................................................................................................................................................... 15 1 12 0.08 1 0 0 0 0 0 0 1 0 0 0
.....................................AACTCTAGCGCGGGTC..................................................................................................................................................................................................... 16 2 12 0.08 1 0 1 0 0 0 0 0 0 0 0
....................................................................................................................................................................................................AGGTCGGGAAGCAGCTC..................................... 17 2 14 0.07 1 0 0 0 0 0 0 1 0 0 0
.................................................................................................AAGCAGAGCTACGCT.......................................................................................................................................... 15 1 15 0.07 1 0 1 0 0 0 0 0 0 0 0
........................TAGTGCAAACGATAGCTCT............................................................................................................................................................................................................... 19 3 19 0.05 1 0 1 0 0 0 0 0 0 0 0
.....GCTCAGGAAGTGAATCGGA.................................................................................................................................................................................................................................. 19 3 20 0.05 1 0 0 0 0 0 0 0 0 0 1
....................................................................................................................................................TGTCAAAGTGAAGCA....................................................................................... 15 1 20 0.05 1 0 0 0 0 0 0 0 0 1 0

Anti-sense strand reads

ATCAAGGAGTCCTTCACTAAGCCCATCACTTTCGCCATCGAGATCGCGCCCATCGCCTCAGAGGTTCGCTTTCAGAAGGAGTCCTTCAGGGGAATTTTTCGTTTCGATGCGAGCCAGGCAACTCGTCGCCGTTTTTGTCGCCGTCTCTGCAGTTTCACTTCGTCAACGCCCACGCAGACGGCGCATAGGCCTAAGGTCCAGACGTTCGTCGAGGTCGCTGCCACTTCTGCTCGCTACATCTTTGGCGGTC
******************************************************************((...(((..(((((......)))))))).)).......((((((..(((((....((((.....))))....))))))))))).*************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR618934
dsim w501 ovaries
 GSM343915
embryo
 SRR553488
RT_0-2 hours eggs
 SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR553486
Makindu_3 day-old ovaries
.............................................................................................................................................................................................................TAGTCGAGGTCGCTGCCACTAT....................... 22 3 1 1.00 1 0 1 0 0 0 0
....................................................................................................................................TTTGGTCGCCGTCTCTGAAGT................................................................................................. 21 2 3 0.33 1 0 0 0 1 0 0
.....................................................................................TCAGGGGAATCTTTC...................................................................................................................................................... 15 1 3 0.33 1 0 0 1 0 0 0
...........................................................................................................TGCGAGCCAGGCAACCAG............................................................................................................................. 18 2 4 0.25 1 1 0 0 0 0 0
.........................................................................................................................................................................CCACGCAGCCGGCGC.................................................................. 15 1 5 0.20 1 1 0 0 0 0 0
.........................................................................................................................................................................CCACGCAGACGGCCCTTAG.............................................................. 19 2 5 0.20 1 1 0 0 0 0 0
............................CTTTGGCCATCGAGAAC............................................................................................................................................................................................................. 17 2 11 0.09 1 1 0 0 0 0 0
..........................................................................................................................TCGTCGCCTTTTTTGTCG.............................................................................................................. 18 1 11 0.09 1 1 0 0 0 0 0
..................................CCGTCGAGATCGCGCCG....................................................................................................................................................................................................... 17 2 11 0.09 1 1 0 0 0 0 0
.................................................CCATCGCCACAAGGGTTCG...................................................................................................................................................................................... 19 3 12 0.08 1 1 0 0 0 0 0
.........................................................................................................................................................................CCACGCAGACGGCCC.................................................................. 15 1 13 0.08 1 0 0 0 0 1 0
........................................................................................................................................................................................................................GCTGCCACTCCTGCTC.................. 16 1 14 0.07 1 0 0 0 0 1 0
...........................................................................AAGGTGTCCGTCAGGGG.............................................................................................................................................................. 17 2 14 0.07 1 0 0 1 0 0 0
..........................................................................................................AAGCGAGATAGGCAACTCG............................................................................................................................. 19 3 18 0.06 1 1 0 0 0 0 0
.......................................................................TCGGAAGGAGTCCTTT................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 1
...........................................................................AAGGAGTCCATCAGGCG.............................................................................................................................................................. 17 2 20 0.05 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:165861-166110 - dsi_4311 TAGT---TCCTCA------------GGAAGTGATTCGGGTAGTGAAAGCGGTAGCTC------------------------------------------------------------------------TAGC---GCG---------------------------GGTAGCGGAGTCTCCAAGCGAAAGTCTTCCTCAGGA---AGTCCCCTTAAAAAGCAAAGCTACGCTCGGTCCGTTGAGCAGCGGCAAAAACAGCGGCAGAGACGT---------------------CAAAGTGAAGCAGTTGCGGGTGCGTCTGCCGCGTATCCGGATTCCA---------GGTCTGC---------------------------AAGCAGC---TCCAGCGACGGTGAAGACGAGCGATGTAGA---AA----------CCGC-----C---------AG
droSec2 scaffold_2:218070-218319 - TAGT---TCCTCA------------GGAAGTGATTCGGGTAGTGAAAGCGGTAGCTC------------------------------------------------------------------------TAGC---GCG---------------------------GGTAGCGGAGTCTCAAAGCGAAAGTCTTCCTCAGGA---AGTCCCCTTAAAAAGCAAAGCTACGCTCGGTCCGTTGAGCAGCGGCAAAAACAGCGGCAGAGACGT---------------------CAAAGTGAAGCGGTTGCGGGTGCGTCTGCAGCGTATCCGGATTCCA---------GGTCTGC---------------------------AAGCAGC---TCCAGCGACGGTGAAGACGAGCGATGTAGA---AA----------CCGC-----C---------AG
dm3 chr3L:195464-195713 - TAGT---TCCTCA------------GGAAGTGATTCGGGTAGTGAAAGCGGTAGCTC------------------------------------------------------------------------TAGC---GCG---------------------------GGTAGCGGAGTCTCCAAGCGAAAGTCTTCCTCAGGA---AGTCCCCTTAAAAAGCAAAGCTACGCTCGGTCCGTTGAGCAGCGGCAAAAACAGCGACAGCGACGT---------------------CAAAATGAAGCAGTTGCGGGTGCGTCTGCAACGTATCCGGATTCCA---------GGTCTGC---------------------------AAGCAGC---TCCAGCGACGGTGAAGACGAGCGATGTAGA---AA----------CCGC-----C---------AA
droEre2 scaffold_4784:184123-184372 - TAGT---TCCTCA------------GGAAGTGATTCGGGTAGTGAAAGTGGTAGCTC------------------------------------------------------------------------TAGC---GCG---------------------------GGCAGCGGAGTCTCCAAGCGAAAGTCTTCCTCAGGA---AGTCCTCTTAAAAAACAAAGTTACGCTCGCTCCGTTGAGCAGCGGCAAAAACAGCGACAGCGACGT---------------------CAAAGTGAAGCAGCTACGGGTGCGTCTGCAGCGTATCCGTATTCCA---------GGTCTGC---------------------------AAGCAGT---TCCAGCGACGATGAAGACGAGCGATGTAGA---AA----------CCGC-----C---------AG
droYak3 3L:173641-173890 - TAGT---TCCTCA------------GGAAGTGATTCCGGCAGTGAAAGTGGTAGCTC------------------------------------------------------------------------TAGC---GCG---------------------------GGTAGCGGAGTCTCCAAGCGAAAGTCTTCCTCAGGA---AGTCCACTTAAAAAACAAAGTTACGCTCGCTCCGTTGAGCAGCGGCAAAAACAGCGACTGCGACGT---------------------CAAAGTGAAGCAGTTGCGGGTGCGTCTGCAGCGTATCCGGATTCCA---------GGTCTGC---------------------------AAGCAGC---TCCAGCGACGATGAAGACGAGCGATGTAAA---AA----------CCGT-----C---------AG
droEug1 scf7180000409184:141591-141840 + TAGT---TCCTCT------------GGAAGTGATTCAGGCAGCGAAAGCGGAACCTC------------------------------------------------------------------------TAGC---GCT---------------------------GTCAGCAGAGCCTCTAAGCGAAAGTCTTCCTCAGGA---AGTCCCCTTAAAAAGCAGAGCTATGCTCGCTCCGTTGAGCAGCGGCAAAAACAACGCCAACGTCGG---------------------CAAAGTGAGGCAGCTGCAGGTGCGTCTGCAGCGTCTCCGGATTCCA---------GGACTGG---------------------------GAGCAGC---TCCAGCGACGATGAAGGTGAGCGGCGTCGA---AA----------CCGA-----C---------AA
droBia1 scf7180000300910:152487-152736 + TAGT---TCCTCT------------GGAAGTGAATCGGGTAGTGAAAGCGGAAGCTC------------------------------------------------------------------------CAGC---GCG---------------------------GCCAGCGGAGCCTCAAAGCGAAAGTCTTCCTCAGGA---AGTCCCCTTAAGAAGCAAAGCTACTCTCGATCTGTTGAGCAACGACAAAAACAACGCCAACGTCGT---------------------CAAAGTGAAGCAGCTGCGGGTGCGACTGCAGCGTCTCCGGATTCAA---------GGTCAGC---------------------------GAGCAGC---TCCAGTGATGACGAAGATGTGCGTCGCCGG---AA----------TCGA-----C---------AA
droTak1 scf7180000413899:43065-43335 + CAAT---TCCTCT------------GGCAGTGAATCGGGCAGTGACAGCGGAAGCTCCAGCGGA------------------------------------------------------------------------GCA---------------------------GCTAGCGGTGCCTCCAAGCGAAAGTCTTCCTCCGGAAGAAGCCCCCTCAAAAAGCAGAGCTACGCTCGATCCGTTGAGCAGCGGCAAAAGCAGCGACAGCGTCGG---------------------CAAAGTGAAGCGGCTGCGGGTGCGTCTGCGGCGTCTCCGGATTCCA---------GGTCAGGAGGAGGCAGCA---------------GCAGCAGC---TCCAGCGATGACGAGGACGAGCGACGCCGGACGAG----------CCGA-----C---------CA
droEle1 scf7180000491249:160850-161102 + TAGT---TCATCT------------GGAAGTGAATCGGGTAGTGAGAGCGGAAGCTC------------------------------------------------------------------------CAGC---GCA---------------------------GCCAGCGGAGTCTCCAACCGAAAGTCCTCTTCAGGAAGAAGCCCCCTTAAGAAGCAGAGCTACGCCCGCTCCGTTGAACAGCGGCAGAAACAGCGCCAGCGTCGC---------------------CAAAGTGAGGCAGCTACGGGTGCGTCTGCGGCGTGTCCGGATTCCA---------GGTCCGG---------------------------GAGCAGC---TCCACCGAAGACGAAGTCGAGCGTCGTAAA---AG----------TGAG-----C---------AA
droRho1 scf7180000762853:48294-48546 + TAGT---TCATCT------------GGAAGTGAATCGGGTAGTGAGAGCGGAAGCTC------------------------------------------------------------------------CAGC---GCG---------------------------GCCAGCGGAGTCTCCAACCGAAAGTCTTCCTCAGGAAGAAGCCCCCTTAAGAAGCAAACCTATGCCCGCTCCGTTCAACAGCGGCAGAAACAGCGCCAGCATCGC---------------------CAAAGTGAAGCAGCTACGGGTCTGTCTGCAGCGTCTCCGGATTCCA---------GGTCCGC---------------------------AAGCAGC---TCCAGCGAAGACGAAGGCGATCGTCGTAAA---AG----------TGGG-----C---------AA
droFic1 scf7180000454105:196738-196987 + AAGT---TCCTCC------------GGAAGTGAATCGGGAAGTGAGAGTAGAAGCTC------------------------------------------------------------------------TAGC---GCA---------------------------GCCAGCGGAGTCTCCAAGCGAAAGTCTGCCTCAGGA---AGCCCACTCAAAAAGCAAAGTTACGCGCGCTCCGTTGAGCAGCGACAAAAACAGCGCCAGCGGCGC---------------------CAAAGTGAAGCTGCTACGGGTGCGACTGCGGCGTCTCCGGATTCCA---------GATCCGG---------------------------GAGCAGC---TCTAGCGATGACGAAGACGAACGTAGTAGG---GG----------CTGT-----C---------AA
droKik1 scf7180000302510:705481-705715 + CAGC---TCCTCT------------GGCAGTGAGTCGGGAAGCGATAGC---AGCTC------------------------------------------------------------------------CAGC---GC------------------------------------TGCCTCCAGGCGCAAGTCCTCCGCGGGAGCAAGTCCCCTCAAGAAGCAGAGCTACGCCCGGTCCGTGGAGCAGCGGCAAAAGCAGCGACAGCGGCGT---------------------CAAACTGAAGCAGCTGCGGGTGCGTCTGCAGCGTCTCCGGATTCCA---------GGTCTGG---------CA---------------GCAGCAGC---TCCAGCGACGACGAAGACAA---------C---GA----------CCGC-----C---------GG
droAna3 scaffold_13337:569464-569713 + AAGC---TCCTCC------------GGAAGCGACTCTGGAAGCGAGAGCGGCAGCTC------------------------------------------------------------------------CAGT---CCC---------------------------ACAAGCGGAGCCTCGCCGCGGAAGTCTTCCGCGGAC---AGTCCCCTCAAAAAGCAGAGCTACTCCCGGTCTGTGGAGCAACGGCAGAAACGGCGTCAACGACGT---------------------CAGAGTCAAGCCGCTGCGGGTGCGTCTGCTGCGTCTCCGCATTCCC---------CCTCAGG---------------------------AAGCAGT---TCCAGCGACGAGGAAGACGAGCGGCGAAGA---AG----------CGGA-----C---------CA
droBip1 scf7180000395155:189975-190224 - CAGC---TCCTCC------------GGCAGCGATTCGGGAAGCGAGAGCGGAAGCTC------------------------------------------------------------------------CAGT---CCC---------------------------ACAAGCGGAGCCTCGCGGCGGAAGTCCTCTGCGGAC---AGTCCCCTCAAGAAGCAGAGCTACGCCCGATCCGTGGAACAGCGGCAGAAGCGGCGTCAACGACGC---------------------CAGAGTCAAGCCGCTGCGGGTGCGTCTGCTGCGTCTCCGAATACGG---------CCTCTGG---------------------------AAGCAGT---TCCAGCGACGAGGAGGACGAGAGGCGAAGA---AC----------CGGA-----C---------CA
dp5 XR_group8:1464579-1464828 + CAGT---TCCTCT------------GCAAGCGATTCGGGCAGTGAGAGCGGAAGCTC------------------------------------------------------------------------AAGC---GCG---------------------------GCCAGCGGAATCTCAAGGCGAAAATCCACCACAGGG---AGTCCTCTCAAAAAGCAAAGCTACGCCCGCTCCGTGGAGCAGCGACAGAAGCAGCGCCAGCGGCGT---------------------CAGAGTGAGGCGGCTGCGGGTGCGTCTGCGGCGTCTCCGAACTCAA---------GATCTGC---------------------------CACCAGC---TCCAGCGAAGATGAGGATGAGCAGCAGAGG---CG----------GCGG-----C---------AG
droPer2 scaffold_32:10765-11014 - CAGT---TCCTCT------------GCAAGCGATTCGGGCAGTGAGAGCGGAAGCTC------------------------------------------------------------------------AAGC---GCA---------------------------CCCAGCGGAATCTCAAGGCGAAAATCCACCACAGGG---AGTCCTCTCAAAAAGCAAAGCTACGCCCGCTCCGTGGAGCAGCGACAGAAGCAGCGCCAGCGGCGT---------------------CAGAGTGAGGCGGCTGCGGGTGCGTCTGCGGCGTCTCCGAACTCAA---------GATCTGC---------------------------CACCAGC---TCCAGCGAAGATGAGGATGAGCAGCAGAGG---CG----------GCGG-----C---------AG
droWil2 scf2_1100000004511:4903892-4904239 - TAGCGCTTCCTCA------------AACAGTGATTCAGGCAGTGAAAGTCCCGGCGG------------------------------TAGTTCCTCATGCAGCAGAA---------GAAGAAGAAAAGCAACA---ACAAATACAATGGAAGCCACCTCAACCGCCGGTGGAGGAGG------AGGA---------GGAGGA---GGAGCTGTTGGTAAACAAAGTTATAGTCGAACCATGGAGCAACGGCAAAAGCAACGTCAACAACGCCAGCAACGTCAACGGCAATTGCAAAATGAGGCGTCTAAGAGTACAACTAAAACGGCTCCAGTTACCACCAATCCAAACAGTAG---------CAGTAGTAGCGCCGCTAGCAGCAGT---TCCAGCGATGATGAGGACGAAGATGATGAG----C----------CTGA-----G------AGAAG
droVir3 scaffold_13049:549061-549349 - CAGC---TCCTCC------------------GACTCCGGCAGCGCCAGCGGCAGCGGCAGCGAATCCAACAGCGATAGCCGCGGCTACCACGGCA------ACAAATCCCAGC-------------------------------------------------------------------------------CAGCTGCG-----GGAGCAGTCAAAAAGCAATCCTATGCGCGCAGCGTCGAGCAGCGACAGAGGCAGCGACAGCGGCGT---------------------CAAAGTGAGGCGGCTGCGTGTGCGTCTGCAGCGTCTGCGGGTGCGC---------GGACCAG---------CT---------------GCAGCAGTTCCTCCAGCGACGACGACGACGATGATCGGGCG---AGAGCACGAGCGCGGGCCAGAGAAAGGGAAAGG
droMoj3 scaffold_6680:665706-666026 + CAGT---TCCGAC---TCCAGCAGCGAAAGCGATTCAGGCAATGAGAGCCACAGCTA------------------------------TCGCAGCTATCGCAGTAAAGCCCAGCCAGGAGGAGGTACAGCCACTGCCACTGCCACAGCCACAGGCACATCAAC------------AGC------GGGA---------GCAGCC---AAGCCCGTGCGTAAGCAATCCTATGCGCGCAGCGTTGAGCAGCGCAAGAAGCAGCGACAGCGGCGT---------------------CAGAGTGAGGCAGCTGCGTGTGCGTCTGCTGCGTCTGCCAATGCAC---------GCAGCAG---------CTGCAGCAGCAGCAGTAGCAGCAGT---AGAAGC-AGGAGCAGGAGCAGGAGCAGCAG---TT----------CCTC-----C---------AG
droGri2 scaffold_15110:1803737-1804001 - CAGT---TCCTCGTCTTCGAACAGCAACAGTGATTCCGCCACCGATAGCCATAGTGG------------------------------------------------------------------AAGAGCGAGA---ACG---------------------------GGTACGGGAGC------GGGAG---------CAGCTAGTAAACCGAGTCGAAAGCAATCGTATGCGAGGAGCGTTGAGCAGCGACAGAAGCAGCGGCAGCGACGT---------------------CAAAGTGAGGCAGCTGCGCGTGCTTCTGCGGCGTCTGCCGATGCCC---------GATCAGCGGCGACAAGCA---------------GCAGCAGT---TCCTCCAGCGATGAAGATGAGCGTCATCCG----A----------CCGT-----C-----------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TAGT---TCCTCA------------GGAAGTGATTCGGGTAGTGAAAGCGGTAGCTC------------------------------------------------------------------------TAGC---GCG---------------------------GGTAGCGGAGTCTCCAAGCGAAAGTCTTCCTCAGGA---AGTCCCCTTAAAAAGCAAAGCTACGCTCGGTCCGTTGAGCAGCGGCAAAAACAGCGGCAGAGACGT---------------------CAAAGTGAAGCAGTTGCGGGTGCGTCTGCCGCGTATCCGGATTCCA---------GGTCTGC---------------------------AAGCAGC---TCCAGCGACGGTGAAGACGAGCGATGTAGA---AA----------CCGC-----C---------AGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................................................................................................................................GAAGACGAGCGATGTAGA---AA----------C....................2113.00303000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GAAGACGAGCGATGTAGA---AA----------CCGC-----C---------..2511.00101000000000000000
...........................................................................................................................................................................................................................GCAAAGCTACGCTCGGTCCGTTGAGCAGC.................................................................................................................................................................................................................2911.00100010000000000000
........................................................C------------------------------------------------------------------------TAGC---GCG---------------------------GGTAGCGGA..........................................................................................................................................................................................................................................................................................1711.00100000000001000000
................................................................................................................................................................................................................................................................................................................GTTGCGGGTGCGTCTGCCGCG....................................................................................................................................2111.00100000000001000000
.......................................................................................................................................................................................................................................TCGGTCCGTTGAGCAGCGGTTT............................................................................................................................................................................................................2211.00100000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAGACGAGCGATGTAGA---AA----------C....................2311.00101000000000000000
.................................................................................................................................................................................................................................................................AGCGGCAGAGACGT---------------------CAAAGTGAAGCA.........................................................................................................................................................2611.00100100000000000000
...................................CGGGTAGTGAAAGCGGTA....................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000010000000
droSec2
TAGT---TCCTCA------------GGAAGTGATTCGGGTAGTGAAAGCGGTAGCTC------------------------------------------------------------------------TAGC---GCG---------------------------GGTAGCGGAGTCTCAAAGCGAAAGTCTTCCTCAGGA---AGTCCCCTTAAAAAGCAAAGCTACGCTCGGTCCGTTGAGCAGCGGCAAAAACAGCGGCAGAGACGT---------------------CAAAGTGAAGCGGTTGCGGGTGCGTCTGCAGCGTATCCGGATTCCA---------GGTCTGC---------------------------AAGCAGC---TCCAGCGACGGTGAAGACGAGCGATGTAGA---AA----------CCGC-----C---------AGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................AGTGATTCGGGTAGTGAAAGC........................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020110
...T---TCCTCA------------GGAAGTGATTCG....................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
...................................................................................................................................................................................CAAAGCGAAAGTCTTCCTCAGGA---A...........................................................................................................................................................................................................................................................2411.0010100
....................................................................................................................................................................................................................................................................................................................CGGGTGCGTCTGCAGCGT...................................................................................................................................1811.0010010
......................................................................................................................................................................................................................AAAAAGCAAAGCTACGCTCGGTCCGTTG.......................................................................................................................................................................................................................2811.0010100
.............................................................................................................................................................................................................................................................AAACAGCGGCAGAGACGT---------------------CA...................................................................................................................................................................2011.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAGACGAGCGATGTAGA---AA----------.....................2211.0011000
.............................................................................................................................................................................................................................................................................................................................................................................................................GACGGTGAAGACGAGCGATGT.......................................2111.0010010
.............................GTGATTCGGGTAGTGAAAGCGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
dm3
TAGT---TCCTCA------------GGAAGTGATTCGGGTAGTGAAAGCGGTAGCTC------------------------------------------------------------------------TAGC---GCG---------------------------GGTAGCGGAGTCTCCAAGCGAAAGTCTTCCTCAGGA---AGTCCCCTTAAAAAGCAAAGCTACGCTCGGTCCGTTGAGCAGCGGCAAAAACAGCGACAGCGACGT---------------------CAAAATGAAGCAGTTGCGGGTGCGTCTGCAACGTATCCGGATTCCA---------GGTCTGC---------------------------AAGCAGC---TCCAGCGACGGTGAAGACGAGCGATGTAGA---AA----------CCGC-----C---------AASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................AAAGCTACGCTCGGTCCGTTGAGC....................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................GTATCCGGATTCCA---------GGTC..........................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002200000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................ATCCGGATTCCA---------GGTCTGC---------------------------AAGCAGC---TC................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................GCAACGTATCCGGATTCCA---------GGT...........................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................CGGTAGCTC------------------------------------------------------------------------TAGC---GCG---------------------------GGTAG..............................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AGT---TCCTCA------------GGAAGTGATTCGGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TGCAACGTATCCGGATTCCA---------GGTCTG........................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GCGGTAGCTC------------------------------------------------------------------------TAGC---GCG---------------------------GGT................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................AGACGAGCGATGTAGA---AA----------CC...................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......TCCTCA------------GGAAGTGATTCGGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................CGACAGCGACGT---------------------CAAAATGAAGCAGT.......................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000
...................................................................................................................................................................................................................................ACGCTCGGTCCGTTGAGCA...................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................AAGCGGTAGCTC------------------------------------------------------------------------TAGC---GCG---------------------------GGTAGCGG...........................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................CGGTAGCTC------------------------------------------------------------------------TAGC---GCG---------------------------GGTAGCGGAGTC.......................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................TGAAAGCGGTAGCTC------------------------------------------------------------------------TAGC---GCG---------------------------GG.................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................TTCCA---------GGTCTGC---------------------------AAGCAGC---TCCAGCGACG........................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCGATGTAGA---AA----------CCGC-----C---------..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................A---------GGTCTGC---------------------------AAGCAGC---TCCAGC............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TACGCTCGGTCCGTTGAGCAGCGGCAA............................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................TTCCA---------GGTCTGC---------------------------AAGCAGC---TCCAG.............................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................GACGGTGAAGACGAGCGAT.........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TACGCTCGGTCCGTTGAGC....................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................GGTAGTGAAAGCGGTAGCTC------------------------------------------------------------------------........................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................C---TCCAGCGACGGTGAAGAC................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GCGGTAGCTC------------------------------------------------------------------------TAGC---GCG---------------------------GGTAGCGGAG.........................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.......................................................................................................................................................................................................................................................................................................................................TCCGGATTCCA---------GGTCTGC---------------------------AAGCAGC---..................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................CGGTGAAGACGAGCGATGTAG.....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................CAAAAACAGCGACAGCGACGT---------------------.....................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................GCAGTTGCGGGTGCGTCTGCAACG....................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TAGCGGAGTCTCCAAGCGAAAGTC.........................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................GGTAGCGGAGTCTCCAAG.................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................ACAGCGACAGCGACGT---------------------CAAAATGA.............................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................CCAGCGACGGTGAAGACGA..............................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........................................................................................................................................................................................................................................................................GACGT---------------------CAAAATGAAGCAGTTGCGGGTG...............................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................TGATTCGGGTAGTGAAAGC........................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GACGAGCGATGTAGA---AA----------C....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TACGCTCGGTCCGTTGAGCAGCGGCATC...........................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GGAAGTGATTCGGGTAGTGAAA..........................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AGTGATTCGGGTAGTGAAAGCGGTAATC.................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................CCTCAGGA---AGTCCCCTTAAAAAGC............................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................................................................GCGGAGTCTCCAAGCGAAAGTCTTCCT....................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................AAAAACAGCGACAGCGACGT---------------------C....................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TCGGGTAGTGAAAGCGGTAG...................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................CTCAGGA---AGTCCCCTTAAAAAGCAAA.........................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TCCAGCGACGGTGAAGACGAGCGATG........................................2611.0010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AGCGATGTAGA---AA----------CCGC-----C---------..1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TCCGGATTCCA---------GGTCTGC---------------------------AAGCAGC---TCC...............................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................................................................................TACGCTCGGTCCGTTGAGCAGCGGCA.............................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................TTCGGGTAGTGAAAGCGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................GC---------------------------AAGCAGC---TCCAGCGACG........................................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................GC---TCCAGCGACGGTGAAGACGAG.............................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GCGGTAGCTC------------------------------------------------------------------------TAGC---GCG---------------------------GGTA...............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................CTGC---------------------------AAGCAGC---TCCAGCGACGGTGAAT..................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................AGCAAAGCTACGCTCGGTCCGTTGAGC....................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................CTCGGTCCGTTGAGCAGCGGC..............................................................................................................................................................................................................2111.0010000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ATTCGGGTAGTGAAAGCGGTA....................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.........................................................................................................................................CG---------------------------GGTAGCGGAGTCTCCAAGCGAAAG...........................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................GCG---------------------------GGTAGCGGAGTCTCCAAGCGAAAGT..........................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GACGAGCGATGTAGA---AA----------CCGC-----C---------AA2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................GCGACGGTGAAGACGAGCG...........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................TTCCTCAGGA---AGTCCCCTTAAAA...............................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................................................................................GTTGCGGGTGCGTCTGCA.......................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TCA------------GGAAGTGATTCGGGTAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................TCAGGA---AGTCCCCTTAAAAAGC............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................GGTAGCTC------------------------------------------------------------------------TAGC---GCG---------------------------GGTAGCGGAGTCT......................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................A---------GGTCTGC---------------------------AAGCAGC---TCCAGCGACGGT......................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................TCCAGCGACGGTGAAGAC................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................GAAGCAGTTGCGGGTGCGTCTGC........................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AAATGAAGCAGTTGCGGGTGC..............................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TCCGGATTCCA---------GGTCTGC---------------------------A...........................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................AGCTACGCTCGGTCCGTTGAGCAGC.................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................AAGCAGTTGCGGGTGCGTCTG.........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...................................................TAGCTC------------------------------------------------------------------------TAGC---GCG---------------------------GGTAGCGGAG.........................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TGATTCGGGTAGTGAAAGCGG......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................GCGGGTGCGTCTGCAACGTA..................................................................................................................................2011.0010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................AAAGCGGTAGCTC------------------------------------------------------------------------TAGC---GCG---------------------------C..................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................ACAGCGACAGCGACGT---------------------CAAAAT...............................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................GGTAGCTC------------------------------------------------------------------------TAGC---GCG---------------------------GGTAGCGGAGTC.......................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................CA---------GGTCTGC---------------------------AAGCAGC---TCCAGCGACG........................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...T---TCCTCA------------GGAAGTGATTCGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..................................................................................................................................................................................................................................................................................................................TGCGGGTGCGTCTGCAAC.....................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................AGCTACGCTCGGTCCGTTGAGCAG..................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................AAAGCTACGCTCGGTCCGT.........................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....................................................................................................................................................................................................................TAAAAAGCAAAGCTACGCTCGGTCCGT.........................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.......................................................................................................................................................................................................................................................................AGCGACGT---------------------CAAAATGAAGCA.........................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................GC---TCCAGCGACGGTGAAGACGAGC............................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
....................................................................................................................................................................................................TCAGGA---AGTCCCCTTAAAAAGCAAAGC.......................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
................................................................................................................................................................................TCTCCAAGCGAAAGTCTTCCTCAGGA---AGT.........................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................GT---------------------CAAAATGAAGCAGTTGCGGGTG...............................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GATTCGGGTAGTGAAAGCGGTAGCTC------------------------------------------------------------------------T.......................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................GCG---------------------------GGTAGCGGAGTCTCCAAGCG...............................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................GCG---------------------------GGTAGCGGAGTCTCCAAG.................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TC------------------------------------------------------------------------TAGC---GCG---------------------------GGTAGCGGAGTCTCCAAG.................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................ACGAGCGATGTAGA---AA----------CCGC-----C---------..2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................CGGTAGCTC------------------------------------------------------------------------TAGC---GCG---------------------------GGTAGCGG...........................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................CCAAGCGAAAGTCTTCCTCA..................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................ATTCCA---------GGTCTGC---------------------------AAGCAGC---TCCAGCGA..........................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....................................GGGTAGTGAAAGCGGTAG...................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................ACGCTCGGTCCGTTGAGCAGC.................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................GGGTGCGTCTGCAACGTA..................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................ACGGTGAAGACGAGCGATGTA......................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................ACGT---------------------CAAAATGAAGCAGTTGC....................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
droEre2
TAGT---TCCTCA------------GGAAGTGATTCGGGTAGTGAAAGTGGTAGCTC------------------------------------------------------------------------TAGC---GCG---------------------------GGCAGCGGAGTCTCCAAGCGAAAGTCTTCCTCAGGA---AGTCCTCTTAAAAAACAAAGTTACGCTCGCTCCGTTGAGCAGCGGCAAAAACAGCGACAGCGACGT---------------------CAAAGTGAAGCAGCTACGGGTGCGTCTGCAGCGTATCCGTATTCCA---------GGTCTGC---------------------------AAGCAGT---TCCAGCGACGATGAAGACGAGCGATGTAGA---AA----------CCGC-----C---------AGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................GTGGTAGCTC------------------------------------------------------------------------TAGC---GCG---------------------------G..................................................................................................................................................................................................................................................................................................1811.0011000000
.........................................................................................................................................................................AGCGGAGTCTCCAAGCGAAAGT..........................................................................................................................................................................................................................................................................2211.0010000100
.....................................................................................................................................................................................................................................................................................................................................TATCCGTATTCCA---------GGTCTGC---------------------------AAGCAGT---..................................................................2711.0010000001
........................................................................................................................................................................................................................................................GGCAAAAACAGCGACAGCGAC............................................................................................................................................................................................2111.0011000000
......................................................................................................................................................................................AGCGAAAGTCTTCCTCAGGA---AGT.........................................................................................................................................................................................................................................................2311.0010000010
.............................GTGATTCGGGTAGTGAAAGTGGTAGCT.................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100
droYak3
TAGT---TCCTCA------------GGAAGTGATTCCGGCAGTGAAAGTGGTAGCTC------------------------------------------------------------------------TAGC---GCG---------------------------GGTAGCGGAGTCTCCAAGCGAAAGTCTTCCTCAGGA---AGTCCACTTAAAAAACAAAGTTACGCTCGCTCCGTTGAGCAGCGGCAAAAACAGCGACTGCGACGT---------------------CAAAGTGAAGCAGTTGCGGGTGCGTCTGCAGCGTATCCGGATTCCA---------GGTCTGC---------------------------AAGCAGC---TCCAGCGACGATGAAGACGAGCGATGTAAA---AA----------CCGT-----C---------AGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................................................................CTTAAAAAACAAAGTTACGCTC................................................................................................................................................................................................................................2211.00101000000000
.................................................................................................................................TAGC---GCG---------------------------GGTAGCGGAGTCTC.....................................................................................................................................................................................................................................................................................2111.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................AAGCAGC---TCCAGCGACGATGAAG..................................................2311.00100010000000
............................AGTGATTCCGGCAGTGAAAGT........................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
droEug1
TAGT---TCCTCT------------GGAAGTGATTCAGGCAGCGAAAGCGGAACCTC------------------------------------------------------------------------TAGC---GCT---------------------------GTCAGCAGAGCCTCTAAGCGAAAGTCTTCCTCAGGA---AGTCCCCTTAAAAAGCAGAGCTATGCTCGCTCCGTTGAGCAGCGGCAAAAACAACGCCAACGTCGG---------------------CAAAGTGAGGCAGCTGCAGGTGCGTCTGCAGCGTCTCCGGATTCCA---------GGACTGG---------------------------GAGCAGC---TCCAGCGACGATGAAGGTGAGCGGCGTCGA---AA----------CCGA-----C---------AASizeHit CountTotal NormTotal
No Reads
droBia1
TAGT---TCCTCT------------GGAAGTGAATCGGGTAGTGAAAGCGGAAGCTC------------------------------------------------------------------------CAGC---GCG---------------------------GCCAGCGGAGCCTCAAAGCGAAAGTCTTCCTCAGGA---AGTCCCCTTAAGAAGCAAAGCTACTCTCGATCTGTTGAGCAACGACAAAAACAACGCCAACGTCGT---------------------CAAAGTGAAGCAGCTGCGGGTGCGACTGCAGCGTCTCCGGATTCAA---------GGTCAGC---------------------------GAGCAGC---TCCAGTGATGACGAAGATGTGCGTCGCCGG---AA----------TCGA-----C---------AASizeHit CountTotal NormTotal
No Reads
droTak1
CAAT---TCCTCT------------GGCAGTGAATCGGGCAGTGACAGCGGAAGCTCCAGCGGA------------------------------------------------------------------------GCA---------------------------GCTAGCGGTGCCTCCAAGCGAAAGTCTTCCTCCGGAAGAAGCCCCCTCAAAAAGCAGAGCTACGCTCGATCCGTTGAGCAGCGGCAAAAGCAGCGACAGCGTCGG---------------------CAAAGTGAAGCGGCTGCGGGTGCGTCTGCGGCGTCTCCGGATTCCA---------GGTCAGGAGGAGGCAGCA---------------GCAGCAGC---TCCAGCGATGACGAGGACGAGCGACGCCGGACGAG----------CCGA-----C---------CASizeHit CountTotal NormTotal
No Reads
droEle1
TAGT---TCATCT------------GGAAGTGAATCGGGTAGTGAGAGCGGAAGCTC------------------------------------------------------------------------CAGC---GCA---------------------------GCCAGCGGAGTCTCCAACCGAAAGTCCTCTTCAGGAAGAAGCCCCCTTAAGAAGCAGAGCTACGCCCGCTCCGTTGAACAGCGGCAGAAACAGCGCCAGCGTCGC---------------------CAAAGTGAGGCAGCTACGGGTGCGTCTGCGGCGTGTCCGGATTCCA---------GGTCCGG---------------------------GAGCAGC---TCCACCGAAGACGAAGTCGAGCGTCGTAAA---AG----------TGAG-----C---------AASizeHit CountTotal NormTotal
No Reads
droRho1
TAGT---TCATCT------------GGAAGTGAATCGGGTAGTGAGAGCGGAAGCTC------------------------------------------------------------------------CAGC---GCG---------------------------GCCAGCGGAGTCTCCAACCGAAAGTCTTCCTCAGGAAGAAGCCCCCTTAAGAAGCAAACCTATGCCCGCTCCGTTCAACAGCGGCAGAAACAGCGCCAGCATCGC---------------------CAAAGTGAAGCAGCTACGGGTCTGTCTGCAGCGTCTCCGGATTCCA---------GGTCCGC---------------------------AAGCAGC---TCCAGCGAAGACGAAGGCGATCGTCGTAAA---AG----------TGGG-----C---------AASizeHit CountTotal NormTotal
No Reads
droFic1
AAGT---TCCTCC------------GGAAGTGAATCGGGAAGTGAGAGTAGAAGCTC------------------------------------------------------------------------TAGC---GCA---------------------------GCCAGCGGAGTCTCCAAGCGAAAGTCTGCCTCAGGA---AGCCCACTCAAAAAGCAAAGTTACGCGCGCTCCGTTGAGCAGCGACAAAAACAGCGCCAGCGGCGC---------------------CAAAGTGAAGCTGCTACGGGTGCGACTGCGGCGTCTCCGGATTCCA---------GATCCGG---------------------------GAGCAGC---TCTAGCGATGACGAAGACGAACGTAGTAGG---GG----------CTGT-----C---------AASizeHit CountTotal NormTotal
No Reads
droKik1
CAGC---TCCTCT------------GGCAGTGAGTCGGGAAGCGATAGC---AGCTC------------------------------------------------------------------------CAGC---GC------------------------------------TGCCTCCAGGCGCAAGTCCTCCGCGGGAGCAAGTCCCCTCAAGAAGCAGAGCTACGCCCGGTCCGTGGAGCAGCGGCAAAAGCAGCGACAGCGGCGT---------------------CAAACTGAAGCAGCTGCGGGTGCGTCTGCAGCGTCTCCGGATTCCA---------GGTCTGG---------CA---------------GCAGCAGC---TCCAGCGACGACGAAGACAA---------C---GA----------CCGC-----C---------GGSizeHit CountTotal NormTotal
No Reads
droAna3
AAGC---TCCTCC------------GGAAGCGACTCTGGAAGCGAGAGCGGCAGCTC------------------------------------------------------------------------CAGT---CCC---------------------------ACAAGCGGAGCCTCGCCGCGGAAGTCTTCCGCGGAC---AGTCCCCTCAAAAAGCAGAGCTACTCCCGGTCTGTGGAGCAACGGCAGAAACGGCGTCAACGACGT---------------------CAGAGTCAAGCCGCTGCGGGTGCGTCTGCTGCGTCTCCGCATTCCC---------CCTCAGG---------------------------AAGCAGT---TCCAGCGACGAGGAAGACGAGCGGCGAAGA---AG----------CGGA-----C---------CASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................GAAGCGAGAGCGGCAGCTC------------------------------------------------------------------------CAG.....................................................................................................................................................................................................................................................................................................................................2211.001000010
......................................................................................................................................................................................................................................................................................................GAGTCAAGCCGCTGCGGGTGCGT............................................................................................................................................2311.001100000
................................................................................................................................................................................................................................................GGAGCAACGGCAGAAACGGCGT...................................................................................................................................................................................................2211.001000010
.............................................................................................................................................................................................................................................................................................................................................................................................AAGCAGT---TCCAGCGACGAGGA....................................................2111.001000001
droBip1
CAGC---TCCTCC------------GGCAGCGATTCGGGAAGCGAGAGCGGAAGCTC------------------------------------------------------------------------CAGT---CCC---------------------------ACAAGCGGAGCCTCGCGGCGGAAGTCCTCTGCGGAC---AGTCCCCTCAAGAAGCAGAGCTACGCCCGATCCGTGGAACAGCGGCAGAAGCGGCGTCAACGACGC---------------------CAGAGTCAAGCCGCTGCGGGTGCGTCTGCTGCGTCTCCGAATACGG---------CCTCTGG---------------------------AAGCAGT---TCCAGCGACGAGGAGGACGAGAGGCGAAGA---AC----------CGGA-----C---------CASizeHit CountTotal NormTotal
No Reads
dp5
CAGT---TCCTCT------------GCAAGCGATTCGGGCAGTGAGAGCGGAAGCTC------------------------------------------------------------------------AAGC---GCG---------------------------GCCAGCGGAATCTCAAGGCGAAAATCCACCACAGGG---AGTCCTCTCAAAAAGCAAAGCTACGCCCGCTCCGTGGAGCAGCGACAGAAGCAGCGCCAGCGGCGT---------------------CAGAGTGAGGCGGCTGCGGGTGCGTCTGCGGCGTCTCCGAACTCAA---------GATCTGC---------------------------CACCAGC---TCCAGCGAAGATGAGGATGAGCAGCAGAGG---CG----------GCGG-----C---------AGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................GATTCGGGCAGTGAGAGCGGAAGCT.................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000002
............................................................................................................................................................................................................................................CCGTGGAGCAGCGACAGAAGC........................................................................................................................................................................................................2111.0010100000000
....................................................................................................................................................................................................................................................................................................................................GTCTCCGAACTCAA---------GATCTGC---------------------------CAC.........................................................................2411.0010100000000
droPer2
CAGT---TCCTCT------------GCAAGCGATTCGGGCAGTGAGAGCGGAAGCTC------------------------------------------------------------------------AAGC---GCA---------------------------CCCAGCGGAATCTCAAGGCGAAAATCCACCACAGGG---AGTCCTCTCAAAAAGCAAAGCTACGCCCGCTCCGTGGAGCAGCGACAGAAGCAGCGCCAGCGGCGT---------------------CAGAGTGAGGCGGCTGCGGGTGCGTCTGCGGCGTCTCCGAACTCAA---------GATCTGC---------------------------CACCAGC---TCCAGCGAAGATGAGGATGAGCAGCAGAGG---CG----------GCGG-----C---------AGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................GC---TCCAGCGAAGATGAGGATG...............................................2112.002000002
...T---TCCTCT------------GCAAGCGATTCGGGCAGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................CAGCGAAGATGAGGATGAGCA...........................................2111.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................C---TCCAGCGAAGATGAGGAT................................................1911.001010000
................................................................................................................................................................................................................................................................................................................................................................GC---------------------------CACCAGC---TCCAGCGAA.........................................................1811.001001000
..GT---TCCTCT------------GCAAGCGATTCGGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
droWil2
TAGCGCTTCCTCA------------AACAGTGATTCAGGCAGTGAAAGTCCCGGCGG------------------------------TAGTTCCTCATGCAGCAGAA---------GAAGAAGAAAAGCAACA---ACAAATACAATGGAAGCCACCTCAACCGCCGGTGGAGGAGG------AGGA---------GGAGGA---GGAGCTGTTGGTAAACAAAGTTATAGTCGAACCATGGAGCAACGGCAAAAGCAACGTCAACAACGCCAGCAACGTCAACGGCAATTGCAAAATGAGGCGTCTAAGAGTACAACTAAAACGGCTCCAGTTACCACCAATCCAAACAGTAG---------CAGTAGTAGCGCCGCTAGCAGCAGT---TCCAGCGATGATGAGGACGAAGATGATGAG----C----------CTGA-----G------AGAAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGT---TCCAGCGATGATGAGGAC................................................2713.00330000
...............................................................................................................................................................................................................................................................................................AATTGCAAAATGAGGCGTCTAAGAGT................................................................................................................................................2611.00110000
................................................................................................................................................................................................................................................................................AGCAACGTCAACGGCAATT......................................................................................................................................................................1911.00100010
.............................................................................................................................................................................................................................................CATGGAGCAACGGCAAAAGCAACGT...................................................................................................................................................................................................2511.00100010
.............................................AAGTCCCGGCGG------------------------------TAGTTCCT..........................................................................................................................................................................................................................................................................................................................................................................2011.00110000
...........CA------------AACAGTGATTCAGGCAGTGAAAGT........................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010
.....................................................................................................................................................................................................................................AGTCGAACCATGGAGCAACGGC..............................................................................................................................................................................................................2211.00100010
...........CA------------AACAGTGATTCAGGCAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
..................................................................................................................................................................................................................................................................ACGTCAACAACGCCAGCAACGTC................................................................................................................................................................................2311.00100010
........................................................................................................................................................................................................................................CGAACCATGGAGCAACGGCAAAAG.........................................................................................................................................................................................................2411.00101000
.................................................................................................................................................................................................................................................GAGCAACGGCAAAAGCAA......................................................................................................................................................................................................1811.00100010
........................................................................................................................................................................................................GA---GGAGCTGTTGGTAAACAAAGTTAT....................................................................................................................................................................................................................................2611.00100100
.......................................................GG------------------------------TAGTTCCTCATGCAGCAGAA---------GA...................................................................................................................................................................................................................................................................................................................................................2411.00101000
.............................................................................................................................................................................................................................................................................................................................................TACCACCAATCCAAACAGTAG---------C.............................................................................................2211.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................GATGAGGACGAAGATGATGA.....................................2030.33100100
.......................................................................................................................................................................GTGGAGGAGG------AGGA---------GGAGGA---GGAGC.......................................................................................................................................................................................................................................................2530.33101000
......................................................................................................................................................................GGTGGAGGAGG------AGGA---------GGAGGA---GGAG........................................................................................................................................................................................................................................................2580.25200110
..................................................................................................GCAGCAGAA---------GAAGAAGAA............................................................................................................................................................................................................................................................................................................................................18160.13200011
.....................................................................................................................................................................CGGTGGAGGAGG------AGGA---------GGA..................................................................................................................................................................................................................................................................1990.11100001
......................................................................................................................................................................GGTGGAGGAGG------AGGA---------GGAGGA---GG..........................................................................................................................................................................................................................................................23130.08100100
......................................................................................................................................................................GGTGGAGGAGG------AGGA---------GGAGG................................................................................................................................................................................................................................................................20200.05100100
droVir3
CAGC---TCCTCC------------------GACTCCGGCAGCGCCAGCGGCAGCGGCAGCGAATCCAACAGCGATAGCCGCGGCTACCACGGCA------ACAAATCCCAGC-------------------------------------------------------------------------------CAGCTGCG-----GGAGCAGTCAAAAAGCAATCCTATGCGCGCAGCGTCGAGCAGCGACAGAGGCAGCGACAGCGGCGT---------------------CAAAGTGAGGCGGCTGCGTGTGCGTCTGCAGCGTCTGCGGGTGCGC---------GGACCAG---------CT---------------GCAGCAGTTCCTCCAGCGACGACGACGACGATGATCGGGCG---AGAGCACGAGCGCGGGCCAGAGAAAGGGAAAGGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................................................................................................................................GTCTGCAGCGTCTGCGGGTGCGC---------..............................................................................................................2312.002000000001000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GACGATGATCGGGCG---AGAGCACGAGCGC....................2811.001000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................................................................................................................CTCCAGCGACGACGACGAC................................................1911.001000000000000000000000000000000000000100000000000000000000000000
..........................................................AGCGAATCCAACAGCGATAGCC.........................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000001000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................TGCAGCGTCTGCGGGTGC.........................................................................................................................1811.001000000000000010000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................AGCAGTTCCTCCAGCGACGACGACGA.................................................2611.001000000000000000000000000000000000001000000000000000000000000000
.............................................................................................................................................................................................................................AATCCTATGCGCGCAGCGTCGAGCAGCGA...............................................................................................................................................................................................................2911.001000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................GACGACGACGATGATCGGGCG---A................................2211.001000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................CTGCAGCGTCTGCGGGTGCGC---------..............................................................................................................2111.001000000000100000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................AAGCAATCCTATGCGCGCAGC...........................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
.....................................................................................................................................................................................................................................................................................................................................................................................................CCTCCAGCGACGACGACGACGATG............................................2411.001000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGTTCCTCCAGCGAC.........................................................2011.001000100000000000000000000000000000000000000000000000000000000000
..........................................................AGCGAATCCAACAGCGATAGCCGC.......................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................GAGGCAGCGACAGCGGCGT---------------------C....................................................................................................................................................................2011.001000001000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................GCAGCGTCTGCGGGTGCGC---------G.............................................................................................................2011.001000000010000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................GCAGTTCCTCCAGCGACGA.......................................................1911.001000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................CGC---------GGACCAG---------CT---------------GCAGCAGTTCCT.................................................................2411.001100000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................CAAAGTGAGGCGGCTGCGTGTGCGT............................................................................................................................................2511.001000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................GCGTGTGCGTCTGCAGCGTCTGC...............................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................TCCTATGCGCGCAGCGTCGAG.....................................................................................................................................................................................................................2111.001000000000000000000000001000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................GTGTGCGTCTGCAGCGTCTGCGG.............................................................................................................................2311.001000000001000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................GACAGAGGCAGCGACAGC...............................................................................................................................................................................................1830.672000000000000100000000000000000000100000000000000000000000000000
.........................................GCGCCAGCGGCAGCGGCC..............................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000100000000000000000000000000000000000000000000000000000
droMoj3
CAGT---TCCGAC---TCCAGCAGCGAAAGCGATTCAGGCAATGAGAGCCACAGCTA------------------------------TCGCAGCTATCGCAGTAAAGCCCAGCCAGGAGGAGGTACAGCCACTGCCACTGCCACAGCCACAGGCACATCAAC------------AGC------GGGA---------GCAGCC---AAGCCCGTGCGTAAGCAATCCTATGCGCGCAGCGTTGAGCAGCGCAAGAAGCAGCGACAGCGGCGT---------------------CAGAGTGAGGCAGCTGCGTGTGCGTCTGCTGCGTCTGCCAATGCAC---------GCAGCAG---------CTGCAGCAGCAGCAGTAGCAGCAGT---AGAAGC-AGGAGCAGGAGCAGGAGCAGCAG---TT----------CCTC-----C---------AGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................................................................................................................GT---------------------CAGAGTGAGGCAGCTGCGTGT................................................................................................................................................2311.001000001
.....................................................................................................................................................CAGGCACATCAAC------------AGC------GGGA---------GCAGC................................................................................................................................................................................................................................................................2511.001000010
..........GAC---TCCAGCAGCGAAAGCGATTCAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
...................................................................................................CAGTAAAGCCCAGCCAGGAGGAGGT.............................................................................................................................................................................................................................................................................................................................................2511.001000100
..............................................................................................................................................................................................................................................................................................................CAGCTGCGTGTGCGTCTGC........................................................................................................................................1911.001001000
...........................................................................................................................................................................................................................................................................................................................................................................................................GC-AGGAGCAGGAGCAGGAGC.........................................20200.051000001
..............................................................................................................................................................................................................................................................................................................................................................................................................AGGAGCAGGAGCAGGAGCAGCA.....................................22200.051000001
droGri2
CAGT---TCCTCGTCTTCGAACAGCAACAGTGATTCCGCCACCGATAGCCATAGTGG------------------------------------------------------------------AAGAGCGAGA---ACG---------------------------GGTACGGGAGC------GGGAG---------CAGCTAGTAAACCGAGTCGAAAGCAATCGTATGCGAGGAGCGTTGAGCAGCGACAGAAGCAGCGGCAGCGACGT---------------------CAAAGTGAGGCAGCTGCGCGTGCTTCTGCGGCGTCTGCCGATGCCC---------GATCAGCGGCGACAAGCA---------------GCAGCAGT---TCCTCCAGCGATGAAGATGAGCGTCATCCG----A----------CCGT-----C-----------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/18/2015 at 10:29 PM