ID:dsi_4292 |
Coordinate:3l:8243857-8244006 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
CDS [3l_8243351_8243856_-]; exon [3l_8242806_8243856_-]; intron [3l_8243857_8248395_-]
No Repeatable elements found
| --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## TCAGGTTTAAAGATGGCTTGTGAAATTCCAGATACGACTGAAAAACATGAAGTCAAGATTTATATAATTAATTTATACATAGCTAGAGCCTTACTTTGAAACTATAGAACCAATAGTTCCAGGATTTATACATAGATTTATACCTATAGATTTATACTTCTTTTTCGAACAAAATCTAACATCCACCTTCTTTTTTCAAGACCACCATGTGCACTTCGACACGAACACGGTGAAGGATGACTTCGAATCG **************************************************.....((((((.(((((.....)))))....((....)).....((((.((((((.......)))))).))))........((((((((((....))))))))))..(((......)))..)))))).......................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M024 male body |
SRR553488 RT_0-2 hours eggs |
SRR553485 Chicharo_3 day-old ovaries |
M025 embryo |
SRR618934 dsim w501 ovaries |
SRR553486 Makindu_3 day-old ovaries |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| .................................ACGACTGAAAAACATGAAGT..................................................................................................................................................................................................... | 20 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
| .............................................................................................................................................................TTCTTTTTCGAATAAAA............................................................................ | 17 | 1 | 11 | 0.55 | 6 | 0 | 3 | 1 | 0 | 0 | 1 | 1 |
| ................................................................................................................ATAGTTCGAGGACTTATCC....................................................................................................................... | 19 | 3 | 14 | 0.14 | 2 | 0 | 0 | 0 | 2 | 0 | 0 | 0 |
| .....................................................................................................................................................................................TCCACGTACTTTTTTCAAGG................................................. | 20 | 3 | 7 | 0.14 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
| ..................................................................................................................................................................................................................................GCAGTGAAGGATGACTT....... | 17 | 2 | 7 | 0.14 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
| .............................................................................................................................................................TTCTTTTTCGAAAAAAA............................................................................ | 17 | 1 | 15 | 0.07 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
| ...................GTGAAATTCTAGATA........................................................................................................................................................................................................................ | 15 | 1 | 19 | 0.05 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
|
AGTCCAAATTTCTACCGAACACTTTAAGGTCTATGCTGACTTTTTGTACTTCAGTTCTAAATATATTAATTAAATATGTATCGATCTCGGAATGAAACTTTGATATCTTGGTTATCAAGGTCCTAAATATGTATCTAAATATGGATATCTAAATATGAAGAAAAAGCTTGTTTTAGATTGTAGGTGGAAGAAAAAAGTTCTGGTGGTACACGTGAAGCTGTGCTTGTGCCACTTCCTACTGAAGCTTAGC
**************************************************.....((((((.(((((.....)))))....((....)).....((((.((((((.......)))))).))))........((((((((((....))))))))))..(((......)))..)))))).......................************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | GSM343915 embryo |
M024 male body |
SRR553485 Chicharo_3 day-old ovaries |
SRR553487 NRT_0-2 hours eggs |
|---|---|---|---|---|---|---|---|---|---|
| ......................................................................................................................................................................................GGTGGAAGAGGAAAGTTATGGT.............................................. | 22 | 3 | 3 | 0.33 | 1 | 1 | 0 | 0 | 0 |
| ........................................................................................................................................................AGATGAAGAACAAGCTAGTTT............................................................................. | 21 | 3 | 5 | 0.20 | 1 | 0 | 1 | 0 | 0 |
| ........................................................................................................................................................................................................AGGTGGTACACGTGAA.................................. | 16 | 1 | 6 | 0.17 | 1 | 0 | 0 | 1 | 0 |
| ........................................................................AAAATGTCTCGATCTC.................................................................................................................................................................. | 16 | 2 | 20 | 0.05 | 1 | 0 | 0 | 0 | 1 |
Generated: 04/24/2015 at 10:47 AM