ID:

dsi_4146

 Coordinate:

3r:25542485-25542634 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.5 -8.5 -8.5

Flybase annnotation

CDS [3r_25542367_25542484_+]; exon [3r_25542355_25542484_+]; intron [3r_25542485_25542847_+]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ATACTGCCAGAATACTGTAATCACCGCATGCTCTACGTCAGCCTTTTCGGGTGAGTAAAGAGAGCGCCTCTAAGAGAGAGTGGCTAATCTGTGTTGTTGCTTTTTGTATCTTTGTAAAACATAATAATAAAAACAAGCGCTCACGGGCTTTTTCACAGGCAAAAGTAAGTGAAATATAGATTGGATGTTTTTCTGCACTATATCAGATTTAGTGAAAATGAACTCTTTCCAATTCGTACTGTTTTACGGC
************************************************************************************************************************************..(((((.((.(((.((.((((((..((....))..))))))...)).)))))))))).........*************************************************** 		Read size # Mismatch Hit Count Total Norm Total M025
embryo
 M024
male body		 SRR553486
Makindu_3 day-old ovaries
 M053
female body
 M023
head
 SRR618934
dsim w501 ovaries
 SRR553485
Chicharo_3 day-old ovaries
 GSM343915
embryo
 SRR902009
testis
 SRR902008
ovaries
 SRR553488
RT_0-2 hours eggs
 SRR553487
NRT_0-2 hours eggs
....TGCCAGAATACTGTAATCACCGCT.............................................................................................................................................................................................................................. 24 1 1 7.00 7 0 0 7 0 0 0 0 0 0 0 0 0
ATACTGCCAGAATACTGTAATCACCGC............................................................................................................................................................................................................................... 27 0 1 6.00 6 4 2 0 0 0 0 0 0 0 0 0 0
.TACTGCCAGAATACTGTAATCACCGCA.............................................................................................................................................................................................................................. 27 0 1 5.00 5 1 2 0 0 0 0 2 0 0 0 0 0
ATACTGCCAGAATACTGTAATCACC................................................................................................................................................................................................................................. 25 0 1 5.00 5 5 0 0 0 0 0 0 0 0 0 0 0
.TACTGCCAGAATACTGTAATCACCGC............................................................................................................................................................................................................................... 26 0 1 5.00 5 1 1 3 0 0 0 0 0 0 0 0 0
...............................TCTACGTCAGCCTTTTCGGGCAAC................................................................................................................................................................................................... 24 3 1 4.00 4 0 0 0 0 3 0 0 1 0 0 0 0
...........ATACTGTAATCACCGCATGCT.......................................................................................................................................................................................................................... 21 0 1 3.00 3 1 1 0 1 0 0 0 0 0 0 0 0
........AGAATACTGTAATCACCGCATGCTC......................................................................................................................................................................................................................... 25 0 1 3.00 3 2 0 0 0 1 0 0 0 0 0 0 0
.TACTGCCAGAATACTGTAATCACCGCT.............................................................................................................................................................................................................................. 27 1 1 3.00 3 0 0 3 0 0 0 0 0 0 0 0 0
...........................ATGCTCTACGTCAGCCTTTTCGGG....................................................................................................................................................................................................... 24 0 1 2.00 2 0 0 0 2 0 0 0 0 0 0 0 0
...............................................................................................................................................................................ATAGATTGGATGTTTTTCTGCACT................................................... 24 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
........AGAATACTGTAATCACCGCATGCTCTA....................................................................................................................................................................................................................... 27 0 1 2.00 2 0 0 0 0 0 0 0 0 2 0 0 0
ATACTGCCAGAATACTGT........................................................................................................................................................................................................................................ 18 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
...........................ATGCTCTACGTCAGCCTTTTCGGGC...................................................................................................................................................................................................... 25 1 1 2.00 2 1 0 0 1 0 0 0 0 0 0 0 0
............TACTGTAATCACCGCATGCTCTACGTC................................................................................................................................................................................................................... 27 0 1 2.00 2 0 0 0 0 0 0 0 0 0 2 0 0
.TACTGCCAGAATACTGTAATCACC................................................................................................................................................................................................................................. 24 0 1 2.00 2 0 2 0 0 0 0 0 0 0 0 0 0
.TACTGCCAGAATACTGTAAT..................................................................................................................................................................................................................................... 20 0 1 2.00 2 2 0 0 0 0 0 0 0 0 0 0 0
....TGCCAGAATACTGTAATCACCGCA.............................................................................................................................................................................................................................. 24 0 1 2.00 2 0 0 0 1 0 0 0 0 0 0 1 0
.............................................................................................................................................................................ATATAGATTGGATGTTTTTCTGCACT................................................... 26 0 1 2.00 2 1 1 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................AAACAAGCGCTCATGAGC...................................................................................................... 18 2 3 1.67 5 0 0 0 0 0 5 0 0 0 0 0 0
................GTAATCACCGCATGCTCTAC...................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
...........................ATGCTCTACGTCAGCCTTTTCG......................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
................................CTACGTCAGCCTTTTCGGGCAAC................................................................................................................................................................................................... 23 3 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
............................................................................................................TTTTTGTAAGACATAATAATAACAA..................................................................................................................... 25 3 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
.......CAGAATACTGTAATCACCGCATGCT.......................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................ATCACCGCATGCTCTACGTC................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.....................................................................................................................................................................................................................................CAATTCGTACTGTTTTACGGC 21 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
.......CAGAATACTGTAATCACCGCATGCTC......................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........AATACTGTAATCACCGCATGCT.......................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 0 0 1 0 0 0 0
.TACTGCCAGAATACTGTAATCACCG................................................................................................................................................................................................................................ 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
.......CAGAATACTGTAATCACCGCA.............................................................................................................................................................................................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TATAGATTGGATGTTTTTCTGCACT................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.........................GCATGCTCTACGTCAGCCTTTTCGGGC...................................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AACTCTTTCCAATTCGTACTGTG....... 23 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
ATACTGCCAGAATACTGTA....................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.............................GCTCTACGTCAGCCTTTTCGGG....................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..........AATACTGTAATCACCGCTTGCTCTACGTC................................................................................................................................................................................................................... 29 1 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................AATATAGATTGGATGTTTTTCTGCACC................................................... 27 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
ATACTGCCAGAATACTGTAAT..................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........ATACTGTAATCACCGCATGCTCTACGTC................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........ATACTGTAATCACCGCATGCTCTAC...................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.......................................................................................................................................................................AGTGAAATATAGATTGGATGTTTTT.......................................................... 25 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
GTACTGCCAGAATACTGTAATCACCGC............................................................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............................................................................................................................................................................................................................AACTCTTTCCAATTCGTACTGTTT...... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
........................................................................................................................................................................................................AATCAGATTTAGTGAAAATGAACTCT........................ 26 1 1 1.00 1 0 0 0 0 0 0 1 0 0 0 0 0
.............................................TTCGGGTGAGTAAAGAGA........................................................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
ATACTGCCAGAATACTGTAATCACCGCA.............................................................................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
..............................CTCTACGTCAGCCTTTTCGGGC...................................................................................................................................................................................................... 22 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
................................CTACGTCAGCCTTTTCGGG....................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..................................................GTGAGTAAAGAGAGCGCCC..................................................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
ATACTGCTAGAATACTGTAATCACCGCA.............................................................................................................................................................................................................................. 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
............TACTGTAATCACCGCATGCT.......................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.....................CACCGCATGCTCTACGTCA.................................................................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................ATATAGATTGGATGTTTTTCTGCACC................................................... 26 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........ATACTGTAATCACCGCATGCTC......................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
ATACTGCCAGAATACTGTAAC..................................................................................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
........GGAATACTGTAATCACCGCATGCTC......................................................................................................................................................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0 0 0 0 0 0 0
...................................................................................................................................................................................ATTGGATGTTTTTCTGCACTATATCAGAT.......................................... 29 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................CTCTACGTCAGCCTTTTCGG........................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
...........................TTGCTCTACGTCAGCCTTTTCGGGCA..................................................................................................................................................................................................... 26 3 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
................................CTACGTCAGCCTTTTCGGGC...................................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..........AATACTGTAATCACCGCATGCTCT........................................................................................................................................................................................................................ 24 0 1 1.00 1 0 0 0 0 0 0 0 0 1 0 0 0
.........GAATACTGTAATCACCGCATGC........................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0 0 0 0 0 0 0
..............................................................................................................................................................................TATAGATTGGATGTTTTTCTGCACG................................................... 25 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
ATACTGCCAGAATACT.......................................................................................................................................................................................................................................... 16 0 1 1.00 1 0 0 1 0 0 0 0 0 0 0 0 0
..........AATACTGTAATCACCGCATGCTCTACGAC................................................................................................................................................................................................................... 29 1 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
.TACTGCCAGAATACTGTAA...................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 0 1 0 0 0 0 0 0 0
....................................................................................................................................ACAAGCGCTCACGGGCTT.................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0 0 0 0 0 0
..................................................................................................................................AAACAAGCGCTCATG......................................................................................................... 15 1 6 0.67 4 0 0 0 0 0 4 0 0 0 0 0 0
ATACTGCCAGAATACTGG........................................................................................................................................................................................................................................ 18 1 2 0.50 1 0 0 0 0 0 0 0 1 0 0 0 0
.................................................................ATCTCTAAGAGAGAGTGGC...................................................................................................................................................................... 19 2 2 0.50 1 0 0 0 0 0 1 0 0 0 0 0 0
..ATTGCCAGAACACTGTAATC.................................................................................................................................................................................................................................... 20 2 2 0.50 1 0 0 0 0 0 0 0 0 0 0 0 1
ATATTGCCAGAACACTGTA....................................................................................................................................................................................................................................... 19 2 2 0.50 1 0 0 0 0 0 0 1 0 0 0 0 0
..................................................................................................................................AAACAAGCGCTCATGAGCCT.................................................................................................... 20 3 3 0.33 1 0 0 0 0 0 1 0 0 0 0 0 0
.....................................................................................................................................CAAGCGCTCATGAGC...................................................................................................... 15 2 20 0.20 4 0 0 0 0 0 4 0 0 0 0 0 0
..................................................................................................................................AAACAAGCGCTCATGAGCC..................................................................................................... 19 3 15 0.20 3 0 0 0 0 0 3 0 0 0 0 0 0
.................................................................................................................................................................................................................TAGTGAAATTGAACTC......................... 16 1 5 0.20 1 0 0 0 0 0 1 0 0 0 0 0 0
.......................................................................................................................................................................................................ATATCAGTTTTAGTGGAA................................. 18 2 8 0.13 1 0 0 0 0 0 0 0 0 0 0 1 0
..................................................................................................................................AAACAAGCGCTCATGAG....................................................................................................... 17 2 8 0.13 1 0 0 0 0 0 1 0 0 0 0 0 0
.................................................................................................................................GAAACAAGCGCTCAC.......................................................................................................... 15 1 9 0.11 1 0 0 0 0 0 1 0 0 0 0 0 0
..................................................................................................................................................................................................................AGTGAAATTGAACTC......................... 15 1 20 0.10 2 0 0 0 0 0 2 0 0 0 0 0 0
.......................................................................................................................................................................................................ATTTCAGATTTAGTAAAAA................................ 19 2 19 0.05 1 0 0 0 0 0 0 1 0 0 0 0 0
....................................................................................................................................ACAAGCGCTCATGAGC...................................................................................................... 16 2 20 0.05 1 0 0 0 0 0 1 0 0 0 0 0 0
...................................CGTCAGCCGTCTCGGG....................................................................................................................................................................................................... 16 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0
.............................................................................................................................................................GGTAAAAGTACGTGAAA............................................................................ 17 2 20 0.05 1 0 0 1 0 0 0 0 0 0 0 0 0

Anti-sense strand reads

TATGACGGTCTTATGACATTAGTGGCGTACGAGATGCAGTCGGAAAAGCCCACTCATTTCTCTCGCGGAGATTCTCTCTCACCGATTAGACACAACAACGAAAAACATAGAAACATTTTGTATTATTATTTTTGTTCGCGAGTGCCCGAAAAAGTGTCCGTTTTCATTCACTTTATATCTAACCTACAAAAAGACGTGATATAGTCTAAATCACTTTTACTTGAGAAAGGTTAAGCATGACAAAATGCCG
***************************************************..(((((.((.(((.((.((((((..((....))..))))))...)).)))))))))).........************************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total SRR902009
testis
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 M023
head
 SRR553486
Makindu_3 day-old ovaries
.....................GTGGCGTACGAGATGCAGTC................................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0 0
....................TTTGGCGTACGAGATGCAGT.................................................................................................................................................................................................................. 20 2 1 1.00 1 1 0 0 0 0 0
................CATTAGTTGCGTACGA.......................................................................................................................................................................................................................... 16 1 2 0.50 1 0 1 0 0 0 0
..................................................................................................................................TTTGTTCGCGAGTACTCG...................................................................................................... 18 2 3 0.33 1 0 0 1 0 0 0
..........................................................................................................................................................TGTGCGTTTTCATCGACTTTAT.......................................................................... 22 3 3 0.33 1 0 0 0 1 0 0
.................ATTAGTTGCGTACGA.......................................................................................................................................................................................................................... 15 1 5 0.20 1 0 1 0 0 0 0
..............................................................................................................................................................................................................................TAGAAAGGTTTAGCATGA.......... 18 2 5 0.20 1 0 1 0 0 0 0
................................................................................................................................CTTTTGTTCGCGAGTACTCG...................................................................................................... 20 3 5 0.20 1 0 0 1 0 0 0
...................................................................................................................................TTGTTCGCGAGTACTCG...................................................................................................... 17 2 10 0.20 2 0 0 2 0 0 0
.................................................CCACTCATTTGTCTGGC........................................................................................................................................................................................ 17 2 6 0.17 1 0 1 0 0 0 0
................................................................................................................CCAGTTTGTATGATTATTTTT..................................................................................................................... 21 3 12 0.17 2 0 0 0 0 2 0
..............................................................................................................................................................................................................................GAGAAAGGTTTTGCAAGACAA....... 21 3 9 0.11 1 0 1 0 0 0 0
...................................................................................................................................................GAGCAAGTGTCCGTTATCA.................................................................................... 19 3 13 0.08 1 0 0 0 0 0 1
....................................................................................................................................TGTTCGCGAGTACTCG...................................................................................................... 16 2 20 0.05 1 0 0 1 0 0 0
.....................................................................................................................................GTTCGCGAGTACTCG...................................................................................................... 15 2 20 0.05 1 0 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3r:25542435-25542684 + dsi_4146 ATACTGCCAGAATACTGTAATCACCGCATGCTCTACGTCAGCCTTTT-CGGGTGAGTAA--AGAG------AGCGCCTCT----------------------------------AAGA--GA------------------------------------GAGTGGCTA-------ATCT--GTGT---------TG-TTGCT--T-----------------------------------------------T------TTGTAT-CTTTGT-------AAAACA----------T-------AATAATAAAAACAAGCGCTCACGGGCTTTTTCACAGGCAAAAGTAAGTGAAA------TATAGATTGGATGTTT---------------------------TTCTGCACTATATCAGATTTAGTGAAAAT------------------------GAACT-C-----TTTCCAATTCGTACTG-TT--------------------------TTAC-------GGC
droSec2 scaffold_4:5047928-5048177 + ATACTGCCAGAATACTGTAATCACCGCATGCTCTACGTCAGCCTTTT-CGGGTAAGTAA--AGAG------AGCGACTCT----------------------------------AAGA--GA------------------------------------GAGTGGCTA-------ACCT--GTGT---------TG-TTGCT--T-----------------------------------------------T------TTGTAT-CTTTGT-------AAAACA----------T-------AATAATAAAAACAAGCGCTCACGGGCTTTTTCACAGGCAAAAGTAAGTGAAA------TATAGATTGGATGTTT---------------------------TTCTGCACTATATCAGATTTAGTGAAAAT------------------------GAACT-C-----TTTCCAATTCTTACTG-TT--------------------------TTAC-------GGC
dm3 chr3R:26215001-26215250 + ATATTGCCAGAACACTGTAATCACCGCATGCTCTACGTCAGCCTTTT-CGGGTGAGTAA--AGAG------AGCGCCTCT----------------------------------AAGA--GA------------------------------------GAGTGGCTA-------ATCT--GTGT---------TG-TTGCT--T-----------------------------------------------T------TTGTAT-CTTTGT-------AAAACA----------T-------AATAATAAAAACAAGCGCTCACGGGCTTTTTCACAGGCAAGAGTAAGTGAAA------TATAGATTGGATGTAT---------------------------TTCTGCACTATCTCAGATTTCGTGAAAAT------------------------GAACA-C-----TTTCCAATTCTTACTG-CA--------------------------TTAC-------GGC
droEre2 scaffold_4820:1792761-1793028 - ATATTGCCAGAACACCGTAATCACGGCGTGCTCTTCGTCGGCCTTCT-CGGGTGAGTAA--AGAG------AGCGCCTCT----------------------------------AAGA--GA------------------------------------GAGTGGCTA-------ATCT--GTGT---------TG-TTGCT--T-----------------------------------------------T------TTGTAT-CTTTGT-------AAAACA----------T-------AATAATAAAAACAAGCGCTCACGGGCTTTTTCACAGGCAAAAGTAAGTGAAA------TATAGATTAGATGTTTTGGAAA---AATG---TTGGACA-TT-TTCTGCACTATCTCAGATTTAGT------TAA------AC-------------GAAAA-C-----TTTTCTTTTCTTACTT-GG--------------------------TAAC-------CGC
droYak3 3R:27139751-27140016 + ATACTGTCAGAACACCGTAATCACCGCGTGCTCTTCGTCAGCCTTCT-CGGGTGAGTAA--AGAG------AGCGCCTCT----------------------------------AAGA--GA------------------------------------GTGTGGCTA-------ATCT--GTGT---------TA-TTG----------------------------------------------------T------TTGTAT-CTTTGT-------AAAACA----------T-------AATAATAAAAACAAGCGCTCACGGGCTTTTTCACAGGCAAAAGTAAGTGAAA------TGTAGGTTGGATGTTTTAGAAG---AATG---TTGGAAA-TT-AACTGCACTATCTAAGATTTAGTAAAAAT------------------------TAACT-C-----TTTCCATTTCTCACTG-TG--------------------------TTAC-------GGC
droEug1 scf7180000409555:717464-717806 + GTACTGCCAGAACACCGTAATCACCGCCTGCTCTTCGTCGGCCTTCT-CGGGTGAGTAA--AAGG-A-AAGAGTGCCTCT----------------------------------TACAGAGAGAGCATA-----------------------GATGAAGAGAACCTA-------ATCT--GTGTCT-GTGTGTTG-TTGCT--T-----------------------------------------------T------TTGTAT-ATTTGT-------GAAA--T-AATA---AT-------AATAATAAAAACAAGCGCTCACGGGCTTTTTCACAGGCAAAAGTAAGTGAGA------AATACATTAGATGTTATAAAAATTAATTA---TTCTAAA-TT-TTTTGCACTTT-TAAGTTTGAGT------TCA------ACAAACT-------TCTGAG-ATAAA-TTTCAATTTCTTATTGGTCAACAATAGTTGAAAACCTTTCTTATGTTACCATAA--TGT
droBia1 scf7180000302113:1158482-1158772 - GTACTGCCAGAATACCGTAATCACGGCCTGCTCTTCCTCGGCCTTCT-CCGGTGAGTAGAAAGAG------AGCGCCTCT-----------------------------------------------CG-----------------------CTTGAAGAGAACCTA-------ATCT--GTGTCCCCTGTGTTG-TTGCTATT-----------------------------------------------T------TTGTAT-CTTTGT-------GAAA-----ATAATAAT---AATAAATAATAAAAACAAGCGCTCACGGGCTTTTTCACAGGCAAAAGTAAGTGAAA------AGTAGAATGGATGTTTA-GAA----AATGTTTTT-TAAAATTATTCAGCACATTTCCAATTTGAGT------TTG------AA-------------G-----------------------------------------AAAATTATTGTTA--TTATCGTAAAAAAA
droTak1 scf7180000415765:688857-689159 + GTACTGCCAAAACACCGTAATCACGGCCTGCTCTTCCTCGGCCTTCT-CGGGTGAGTAAAAAGAG------AGCGCCACT-----------------------------------------------CG-----------------------GGCGAAGAGAACCTA-------ATCT--GCTT---------TGCTTGCTTTT-----------------------------------------------T------TTGTAT-CTTTGT-------GAAA-----ATAATAATAATAATAAATAATAAAAACAAGCGCTCACGGGCATTTTCACAGGCAAAAGTAAGTGGAA------AGTAGAATGGATGTTTTAGAAAAA-AATATTATT-TAAA-TT-TTGCGCACTTTTCAAATATTAAG-----TTAA------AT-AATT-------TTAAAAAC-TAATTTCAAAATTCTTATTGGTC--------------------------TTAA-------AAT
droEle1 scf7180000491280:2522858-2523060 + GTACTGCCAGAACACGGTGGTCACCGCGTGCTCTTCGTCAACCTTCT-CCGGTGAGTAA--AGAG------AACGC-TCT----------------------------------G--AGAGAGAGCATG-----------------------GGTGAAGAGAACCTA-------ATTT--TTGTTC-GTGTATTG-TTGCT--T------------------------------------------------------TTGTAC-CTTTAT-------AAAA--T-AATA---------------------AACAAGCGCTCACTGGCTTTTTCACAGGAAAAAGTAAGTTTAA------AGTAAATTAGATGTTTT------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000780069:65659-65941 + GTACTGCCAGAGCAATGTGGTCACCGCCTGCGCTTCGTCGACCTTCT-CCGGTGAGTAA--AGAG------AAAGC-TCT----------------------------------AAGAGAGAGAGCATG-----------------------TGTGAAGAGAACCTA-------ATTT--GTGTTT-GTGTGTTG-TTGCC--T-----------------------------------------------C------TTGTAT-CTTTGT-------AAAA--T-AACA---------------------AACAAGCGCTCACTGGCTTTTTCACAGGAAAAAGTAAGTTAAA------AGAACATTGGATGTTTTGGAAATAAAATG---ATATA-A-CA-TTCTGCACTATTCTAGTTTATGT------TAA------AA-AACT-------TAAAAT-CTTAA-C-TCCAATACCTTCT--------------------------------------------
droFic1 scf7180000454106:259593-259868 - GTATTGCCAAAACACTGTTATCACCGCTTGCGCTTCGTCAGCCTTCT-CCGGTGAGTAC--AGAG-A----AAAGCCTCT----------------------------------AAGGGAAAGAGCATG-----------------------GGTGAAGAGAACATA-------ATTT--GTTTTT-GTTTGTTG-TTGCC--T-----------------------------------------------C------TTTAAT-CTTTT--------GA-----AAATA-----------------AAAGTACAAGCGCTCACTGGCTTTTTTACAGGCAAAAGTAAGTGACA------AATATTTTAAATGTTTAAGAAA---AATC--------------------------TAAGTTCGAAT------TCACGTTAAAA-CA-TTCTGTAGTGAAAT-C-----TTTAC------TACTG-TT--------------------------TAGC-------ACC
droKik1 scf7180000302390:157499-157778 + GTTCTGCCAGAATAACGTGGTTACCGCCTGCTCTTCGTCGACCTTCT-CCGGTGAGTAC--AAAG------TGCGC-TCG--------------------------------CAGTGAAAAAGAGCATG-----------------------TGTGAAGAGAATTTA-------AATT--GTGTTT-ATGCGTTG-TTGTT--T------------------------------------------------------TTGTAT-CTTTGT-------TCA----------------------ATAATAAAAACAAGCGCTCACGGGCTTTTTCACAGGCAAAAGTAAGTGAAA------AATGCAGTAAATGTTTTTAGAA---C------T-----------TCTACATTTTTTGTA---TAGTTAT---TTAA-----AG-------------TAACA-T-----TTTTTGATATGCACAT-TT----------GAGAA-----------TTAT-------TTC
droAna3 scaffold_13340:21242026-21242271 + GTACTGCCAAAACAGCGTGCTCACCGCCTGCTCTTCGTCGACCTTCT-CAGGTAAGTAGCAC---AC----TCCGC---TCACCC-----------------------------GCAGGTGAGAGCCTG-----------------------TGTGAAGAGAGTTTA-------ACTT--GTGTTT-GCGTATTG-TCGTT--G------------------------------------------------TTGCTTT----T-CTTTGT-------AAAA--T-AATA---------------------AACAAGCACTCACGGGCTTTTTCTCAGGCGAATGTAAGTAGTTAGATGACGTAAATTAAATAAAT---------------------------TTTGGAACTA-------------GAACAC------------------------AAACA-----------CAATTCTTA----------------------------------------------
droBip1 scf7180000396413:1210776-1210995 - GTACTGCCAGAACAGCGTGCTCACCGCCTGCTCTTCGTCGACCTTCT-CAGGTAAGTAGCAC---AC----TCCGC---TCACCT-----------------------------ACAGGTGAGAGCATG-----------------------TGCGAAGAGAGTTTA-------ATTT--GTGTTT-GCGTATTG-TCGTT--G------------------------------------------------TTGCTTT----T-CTTTGT-------AAAA--T-AATA---------------------AACAAGCACTCACGGGCTTTTTCTCAGGCGAATGTAAGTAATTAGACGACGTAA-------------------------------------------------------CTTAAAAAAAAT------------------------CG--------------------------------------------------------------------A
dp5 2:1301647-1301835 - GTATTGCCACAACAGCGTGGTTACCGCCTGCTCTTCGTCGACCTTCT-CTGGTGAGTAACAAAAG------AGCGCGTGA----------------------------------AAAA--GAGAGTGCA-----------------------TGTGAAGAGAACCTA-------ACTGATGTGATT-GTGTGTTG-TTTCT--C------------------------------------------------TTGCCTTTGAAT-T-TTAT-------GC-----AAATA---------------------AACAAGCGCTCACGGGCTTTTTCACAGGCGAAAGTAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droPer2 scaffold_7:4102265-4102453 - GTATTGCCACAACAGCGTGGTTACCGCCTGCTCTTCGTCGACGTTCT-CTGGTGAGTAACAAAAG------AGCGCGTGA----------------------------------AAAA--GAGAGTGCA-----------------------TGTGAAGAGAACCTA-------ACTGATGTGATT-GTGTGTTA-TTTCT--C------------------------------------------------TTGCCTTTGAAT-T-TTAT-------GC-----AAATA---------------------AACAAGCGCTCACGGGCTTTTTCACAGGCGAAAGTAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004943:9711215-9711412 + ATATTGCCAGAACAGTGTGATTACGGCGTGCTCTTCGTCGACCTTCT-CTGGTAAGTAA--GAGC------A------------------------------------------ACAGAAACAAACATAAATGAAGAGAGAGCGTTATTTTGAAAAGAGAGAGTTTA-------ACTT--ATATTG---AAATTG-TATTT--A------------------------------------------------TTGTATATGTAT-TTT----------AA-----AAATA---------------------AACAAGCGCTCACGGGCTTTTTCACAGGCGAAAGTAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droVir3 scaffold_12855:3329868-3330109 + GCA----------------------GTCTGCTTGCGGACAAACTGCTAACGGTGAGTACTCC---AC----ACAAA---ATCCCAAAGAGCGAGAGATTGACTGAGCGCACGA-ATGG--AA-------------GAGTGTG-----------AAAGAGAGTGATTG--------------TATAT-GTGTGTGT-GTGCC--T------GTGTG--TGATTACTCGTTCCGGTTTTAACTGTAACTGTGTCTTGCTTCTGAATATTTTAT-AATTTTAA-----AAATA---------------------AACAAGCGCTCATGGCCTTTTTCTCAGACGAAAGTAAGCGAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droMoj3 scaffold_6540:9858477-9858695 - dmo_1887 CT---GCCAAGTAGACGT----TCAGTCTGCTTGCGGACAGAGTGCCAACGGTGAGTAC--AAAAAGAAAAAATACTGTA--TGAA---ATAAGAGAATGAATGAGCGCACGA-ATGG--AA-------------GAGAGTG-----------CAAGAGAGCGATTGAATGATTATTAGTATGAGC-GTGTGTTA-GTGTG--CGTGTTTGTGTGCATGAGCAGTTGATCCGGTTTTAACTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACTGTGTATTG-TT--------------------------TTCT-------GAA
droGri2 scaffold_14906:6020509-6020594 + CT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTCT---G---TC-TTGCC--T------------------------------------------------------TTGATT-ATTAATTAATTTTAA-----AAATA---------------------AACAAGCAATCATGGCCTTTTTCTCAGACGAAAGTAAGCGAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
ATACTGCCAGAATACTGTAATCACCGCATGCTCTACGTCAGCCTTTT-CGGGTGAGTAA--AGAG------AGCGCCTCT----------------------------------AAGA--GA------------------------------------GAGTGGCTA-------ATCT--GTGT---------TG-TTGCT--T-----------------------------------------------T------TTGTAT-CTTTGT-------AAAACA----------T-------AATAATAAAAACAAGCGCTCACGGGCTTTTTCACAGGCAAAAGTAAGTGAAA------TATAGATTGGATGTTT---------------------------TTCTGCACTATATCAGATTTAGTGAAAAT------------------------GAACT-C-----TTTCCAATTCGTACTG-TT--------------------------TTAC-------GGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....TGCCAGAATACTGTAATCACCGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2417.00700000007000000000
ATACTGCCAGAATACTGTAATCACCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2716.00602400000000000000
.TACTGCCAGAATACTGTAATCACCGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2715.00502100020000000000
ATACTGCCAGAATACTGTAATCACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.00500500000000000000
.TACTGCCAGAATACTGTAATCACCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2615.00501100003000000000
...........ATACTGTAATCACCGCATGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00301110000000000000
........AGAATACTGTAATCACCGCATGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.00310200000000000000
.TACTGCCAGAATACTGTAATCACCGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.00300000003000000000
...........................ATGCTCTACGTCAGCCTTTT-CGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200020000000000000
.........................................................................................................................................................................................................................................................................................................................................................................ATAGATTGGATGTTT---------------------------TTCTGCACT...................................................................................................................2412.00201100000000000000
........AGAATACTGTAATCACCGCATGCTCTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000000000002000
ATACTGCCAGAATACTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00201100000000000000
...........................ATGCTCTACGTCAGCCTTTT-CGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200110000000000000
............TACTGTAATCACCGCATGCTCTACGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200000000000020000
.TACTGCCAGAATACTGTAATCACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00202000000000000000
.TACTGCCAGAATACTGTAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200200000000000000
....TGCCAGAATACTGTAATCACCGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200010000010000000
.................................................................................................................................................................................................................................................................................................................................................................A------TATAGATTGGATGTTT---------------------------TTCTGCACT...................................................................................................................2612.00201100000000000000
................GTAATCACCGCATGCTCTAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
...........................ATGCTCTACGTCAGCCTTTT-CG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
.......CAGAATACTGTAATCACCGCATGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
...................ATCACCGCATGCTCTACGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTCGTACTG-TT--------------------------TTAC-------GGC2111.00110000000000000000
.......CAGAATACTGTAATCACCGCATGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000000000
..........AATACTGTAATCACCGCATGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000100000
.TACTGCCAGAATACTGTAATCACCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
.......CAGAATACTGTAATCACCGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
........................................................................................................................................................................................................................................................................................................................................................................TATAGATTGGATGTTT---------------------------TTCTGCACT...................................................................................................................2511.00100100000000000000
.........................GCATGCTCTACGTCAGCCTTTT-CGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACT-C-----TTTCCAATTCGTACTG-TG--------------------------..............2311.00100100000000000000
ATACTGCCAGAATACTGTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
.............................GCTCTACGTCAGCCTTTT-CGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
................................................................................................................................................................................................................................................................................................................................................................AA------TATAGATTGGATGTTT---------------------------TTCTGCACC...................................................................................................................2711.00101000000000000000
ATACTGCCAGAATACTGTAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
...........ATACTGTAATCACCGCATGCTCTACGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000000000
...........ATACTGTAATCACCGCATGCTCTAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................AGTGAAA------TATAGATTGGATGTTT---------------------------TT..........................................................................................................................2511.00100000001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACT-C-----TTTCCAATTCGTACTG-TT--------------------------T.............2411.00100100000000000000
.............................................TT-CGGGTGAGTAA--AGAG------A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
ATACTGCCAGAATACTGTAATCACCGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000000000
..............................CTCTACGTCAGCCTTTT-CGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
................................CTACGTCAGCCTTTT-CGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
...................................................GTGAGTAA--AGAG------AGCGCCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
............TACTGTAATCACCGCATGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
.....................CACCGCATGCTCTACGTCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................................................A------TATAGATTGGATGTTT---------------------------TTCTGCACC...................................................................................................................2611.00100100000000000000
...........ATACTGTAATCACCGCATGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
ATACTGCCAGAATACTGTAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................ATTGGATGTTT---------------------------TTCTGCACTATATCAGAT..........................................................................................................2911.00100010000000000000
..............................CTCTACGTCAGCCTTTT-CGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
................................CTACGTCAGCCTTTT-CGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
..........AATACTGTAATCACCGCATGCTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000000001000
.........GAATACTGTAATCACCGCATGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
........................................................................................................................................................................................................................................................................................................................................................................TATAGATTGGATGTTT---------------------------TTCTGCACG...................................................................................................................2511.00100100000000000000
ATACTGCCAGAATACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.00100000001000000000
.TACTGCCAGAATACTGTAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
........................................................................................................................................................................................................................................................................................................................ACAAGCGCTCACGGGCTT.....................................................................................................................................................................................................1811.00100100000000000000
ATACTGCCAGAATACTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50100000000000100000
droSec2
ATACTGCCAGAATACTGTAATCACCGCATGCTCTACGTCAGCCTTTT-CGGGTAAGTAA--AGAG------AGCGACTCT----------------------------------AAGA--GA------------------------------------GAGTGGCTA-------ACCT--GTGT---------TG-TTGCT--T-----------------------------------------------T------TTGTAT-CTTTGT-------AAAACA----------T-------AATAATAAAAACAAGCGCTCACGGGCTTTTTCACAGGCAAAAGTAAGTGAAA------TATAGATTGGATGTTT---------------------------TTCTGCACTATATCAGATTTAGTGAAAAT------------------------GAACT-C-----TTTCCAATTCTTACTG-TT--------------------------TTAC-------GGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................CTACGTCAGCCTTTT-CGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2019.0091080
................................CTACGTCAGCCTTTT-CGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1917.0073040
....................TCACCGCATGCTCTACGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020011
.....................................................................................................................................................................................................................................................................................................................AAAACAAGCGCTCACGGGCT......................................................................................................................................................................................................2011.0010010
.........................GCATGCTCTACGTCAGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
..................AATCACCGCATGCTCTACGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.....................CACCGCATGCTCTACGTCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
................GTAATCACCGCATGCTCTACGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
.TACTGCCAGAATACTGTAATCACCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000
.............................GCTCTACGTCAGCCTTTT-CGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
...........ATACTGTAATCACCGCATGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
............................TGCTCTACGTCAGCCTTTT-CG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
......................ACCGCATGCTCTACGTCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
...............................TCTACGTCAGCCTTTT-CGGTC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
................GTAATCACCGCATGCTCTACGTCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000
dm3
ATATTGCCAGAACACTGTAATCACCGCATGCTCTACGTCAGCCTTTT-CGGGTGAGTAA--AGAG------AGCGCCTCT----------------------------------AAGA--GA------------------------------------GAGTGGCTA-------ATCT--GTGT---------TG-TTGCT--T-----------------------------------------------T------TTGTAT-CTTTGT-------AAAACA----------T-------AATAATAAAAACAAGCGCTCACGGGCTTTTTCACAGGCAAGAGTAAGTGAAA------TATAGATTGGATGTAT---------------------------TTCTGCACTATCTCAGATTTCGTGAAAAT------------------------GAACA-C-----TTTCCAATTCTTACTG-CA--------------------------TTAC-------GGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................GCATGCTCTACGTCAGCCTTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................CT--GTGT---------TG-TTGCT--T-----------------------------------------------T------TTGTA........................................................................................................................................................................................................................................................................2016.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CTACGTCAGCCTTTT-CGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AATCACCGCATGCTCTACGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010011000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATTGCCAGAACACTGTAATCACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000102000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CACCGCATGCTCTACGTCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......................CCGCATGCTCTACGTCAGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.....................CACCGCATGCTCTACGTCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TGCTCTACGTCAGCCTTTT-CGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............ACTGTAATCACCGCATGCTCTACGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TTGCCAGAACACTGTAATCACCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................AAGAGTAAGTGAAA------TATAG..................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000
............................TGCTCTACGTCAGCCTTTT-CG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CACTGTAATCACCGCATGCTCTACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............CACTGTAATCACCGCATGCTCTAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GCATGCTCTACGTCAGCCTTTT-CG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TGTAATCACCGCATGCTCTACGTCAGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........AACACTGTAATCACCGCATG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000001000000000000000000000000000000000000
................................CTACGTCAGCCTTTT-CGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................AATCACCGCATGCTCTACGTCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................AGCGCCTCT----------------------------------AAGA--GA------------------------------------GAGTGGCT.........................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................ATGCTCTACGTCAGCCTTTT-CGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TGCCAGAACACTGTAATCACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AGAACACTGTAATCACCGCATGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TTGCCAGAACACTGTAATCACCGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........ACACTGTAATCACCGCATGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................ACCGCATGCTCTACGTCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................ACCGCATGCTCTACGTCAGCCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ATCACCGCATGCTCTACGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................CAGGCAAGAGTAAGTGAAA------.......................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................ATAGATTGGATGTAT---------------------------TTCTGCACTAT.................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droEre2
ATATTGCCAGAACACCGTAATCACGGCGTGCTCTTCGTCGGCCTTCT-CGGGTGAGTAA--AGAG------AGCGCCTCT----------------------------------AAGA--GA------------------------------------GAGTGGCTA-------ATCT--GTGT---------TG-TTGCT--T-----------------------------------------------T------TTGTAT-CTTTGT-------AAAACA----------T-------AATAATAAAAACAAGCGCTCACGGGCTTTTTCACAGGCAAAAGTAAGTGAAA------TATAGATTAGATGTTTTGGAAA---AATG---TTGGACA-TT-TTCTGCACTATCTCAGATTTAGT------TAA------AC-------------GAAAA-C-----TTTTCTTTTCTTACTT-GG--------------------------TAAC-------CGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................TCACGGCGTGCTCTTCGTCGGCCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25146.004610000045
................GTAATCACGGCGTGCTCTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2016.0061001310
................................CTTCGTCGGCCTTCT-CGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1916.0063010110
...........................GTGCTCTTCGTCGGCCTTCT-CGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2515.0053100010
..................AATCACGGCGTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0052001110
.............ACCGTAATCACGGCGTGCTCTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.0042200000
..ATTGCCAGAACACCGTAATCACGGCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.0040000400
...............CGTAATCACGGCGTGCTCTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0033000000
.................................TTCGTCGGCCTTCT-CGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000210
.......................CGGCGTGCTCTTCGTCGGCCTTCT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0033000000
..ATTGCCAGAACACCGTAATCACGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.0032100000
..ATTGCCAGAACACCGTAATCAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030100020
.............................GCTCTTCGTCGGCCTTCT-CGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030011010
ATATTGCCAGAACACCGTAATCACGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0021100000
...................ATCACGGCGTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0021000010
.............ACCGTAATCACGGCGTGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0022000000
................................CTTCGTCGGCCTTCT-CGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020010100
.....GCCAGAACACCGTAATCACGGCGTGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0022000000
........................GGCGTGCTCTTCGTCGGCCTTCT-CGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0022000000
........................GGCGTGCTCTTCGTCGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0022000000
.......................CGGCGTGCTCTTCGTCGGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0022000000
..ATTGCCAGAACACCGTAATC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020001100
ATATTGCCAGAACACCGTAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000200
............................TGCTCTTCGTCGGCCTTCT-CGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0022000000
..............................CTCTTCGTCGGCCTTCT-CGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0021000010
.............................GCTCTTCGTCGGCCTTCT-CGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0021000010
.................................TTCGTCGGCCTTCT-CGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0022000000
........................GGCGTGCTCTTCGTCGGCCTTCT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0022000000
........................GGCGTGCTCTTCGTCGGCCTTCT-CGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0021000010
.............................GCTCTTCGTCGGCCTTCT-CGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0022000000
...........................GTGCTCTTCGTCGGCCTTCT-CGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0022000000
...............................TCTTCGTCGGCCTTCT-CGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0021000010
........AGAACACCGTAATCACGGCGTGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0021010000
..ATTGCCAGAACACCGTAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000020
............CACCGTAATCACGGCGTGCTCTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0022000000
.............ACCGTAATCACGGCGTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
.TATTGCCAGAACACCGTAATCACGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
............CACCGTAATCACGGCGTGCTCTTCGTCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
.........................GCGTGCTCTTCGTCGGCCTTCT-CGGGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
ATATTGCCAGAACACCGTAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
..................AATCACGGCGTGCTCTTCGTCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
............................TGCTCTTCGTCGGCCTTCT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
..................AATCACGGCGTGCTCTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
.............ACCGTAATCACGGCGTGCTCTTCGTCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000
...........ACACCGTAATCACGGCGTGCTCTTCGTCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000100
................................CTTCGTCGGCCTTCT-CGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
...............................TCTTCGTCGGCCTTCT-CGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
..............................CTCTTCGTCGGCCTTCT-C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
.........................GCGTGCTCTTCGTCGGCCTTCT-CGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
........................GGCGTGCTCTTCGTCGGCCTTCT-CGGGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0011000000
.................TAATCACGGCGTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000
..........................CGTGCTCTTCGTCGGCCTTCT-CGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
...................ATCACGGCGTGCTCTTCGTCGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
...TTGCCAGAACACCGTAATCACGGCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
.....................CACGGCGTGCTCTTCGTCGGCCTTCT-C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
............CACCGTAATCACGGCGTGCTCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000
......................ACGGCGTGCTCTTCGTCGGCCTTCT-CG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
............................................................................................................................................................................................................................................................................................................................................................................GATTAGATGTTTTGGAAA---AAT...........................................................................................................................................2111.0010000010
.................TAATCACGGCGTGCTCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
.....GCCAGAACACCGTAATCACGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
................GTAATCACGGCGTGCTCTTCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
................GTAATCACGGCGTGCTCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010000
ATATTGCCAGAACACCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010
...............CGTAATCACGGCGTGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0011000000
..........AACACCGTAATCACGGCGTGCTCTTCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
.....................CACGGCGTGCTCTTCGTCGGCCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
..................AATCACGGCGTGCTCTTCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
.........GAACACCGTAATCACGGCGTGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000
.TATTGCCAGAACACCGTAATCACGGCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000010
ATATTGCCAGAACACCGTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
......................ACGGCGTGCTCTTCGTCGGCCTTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
...........ACACCGTAATCACGGCGTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
.......CAGAACACCGTAATCACGGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000010
........AGAACACCGTAATCACGGCGTGCTCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
........................GGCGTGCTCTTCGTCGGCCTTCT-CG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
.TATTGCCAGAACACCGTAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
...........................GTGCTCTTCGTCGGCCTTCT-CG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
........................GGCGTGCTCTTCGTCGGCCTTCT-C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
........................GGCGTGCTCTTCGTCGGCCTTCT-CGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
.....................CACGGCGTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001000
.............................GCTCTTCGTCGGCCTTCT-CGGGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
...........ACACCGTAATCACGGCGTGCTCTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
............CACCGTAATCACGGCGTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
..................AATCACGGCGTGCTCTTCGTCGGCCTTCT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0011000000
ATATTGCCAGAACACCGTAATCACGGCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000100
...................ATCACGGCGTGCTCTTCGTCGGCCTTCT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
......................ACGGCGTGCTCTTCGTCGGCCTTCT-C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000
.................................TTCGTCGGCCTTCT-CGGGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.3310000100
..................................TCGTCGGCCTTCT-CGGGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1950.2011000000
droYak3
ATACTGTCAGAACACCGTAATCACCGCGTGCTCTTCGTCAGCCTTCT-CGGGTGAGTAA--AGAG------AGCGCCTCT----------------------------------AAGA--GA------------------------------------GTGTGGCTA-------ATCT--GTGT---------TA-TTG----------------------------------------------------T------TTGTAT-CTTTGT-------AAAACA----------T-------AATAATAAAAACAAGCGCTCACGGGCTTTTTCACAGGCAAAAGTAAGTGAAA------TGTAGGTTGGATGTTTTAGAAG---AATG---TTGGAAA-TT-AACTGCACTATCTAAGATTTAGTAAAAAT------------------------TAACT-C-----TTTCCATTTCTCACTG-TG--------------------------TTAC-------GGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................GTGCTCTTCGTCAGCCTTCT-CGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24132.0032000000000032
.....................CACCGCGTGCTCTTCGTCAGCCTTCT-C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2717.00711200000003
................................CTTCGTCAGCCTTCT-CGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.00303000000000
............CACCGTAATCACCGCGTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.00312000000000
..................AATCACCGCGTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00300100020000
.................................TTCGTCAGCCTTCT-CGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00201100000000
............CACCGTAATCACCGCGTGCTCTTCGTCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00202000000000
....................TCACCGCGTGCTCTTCGTCAGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00220000000000
............CACCGTAATCACCGCGTGCTCTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00202000000000
...........ACACCGTAATCACCGCGTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
................GTAATCACCGCGTGCTCTTCGTCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000010000
................................CTTCGTCAGCCTTCT-CGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000
.............................GCTCTTCGTCAGCCTTCT-CGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
........................CGCGTGCTCTTCGTCAGCCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
......TCAGAACACCGTAATCACCGCGTGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
.............ACCGTAATCACCGCGTGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.................................................................................................................................................................................................................................................................................................................AATAAAAACAAGCGCTCACGG.........................................................................................................................................................................................................2111.00100000010000
........................CGCGTGCTCTTCGTCAGCCTTCT-CGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000
...................ATCACCGCGTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.....................CACCGCGTGCTCTTCGTCAGCCTTCT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
........AGAACACCGTAATCACCGCGTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.............ACCGTAATCACCGCGTGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
.............ACCGTAATCACCGCGTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
.....GTCAGAACACCGTAATCACCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100000000
.................................................................................................................................................................................................................................................................................................................................................GGCAAAAGTAAGTGAAA------TGTAGGTTG..............................................................................................................................................................2611.00101000000000
.....GTCAGAACACCGTAATCACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000
.........................................................AA--AGAG------AGCGCCTCT----------------------------------AAGA--GA------------------------------------GT...............................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
..............CCGTAATCACCGCGTGCTCTTCGTCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000
.....................CACCGCGTGCTCTTCGTCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
......................................................................................................................................................................A-------ATCT--GTGT---------TA-TTG----------------------------------------------------T------TTGT.........................................................................................................................................................................................................................................................................1911.00101000000000
...CTGTCAGAACACCGTAATCACCGCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
........................CGCGTGCTCTTCGTCAGCCTTCT-CG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000
.......................CCGCGTGCTCTTCGTCAGCCTTCT-CGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
...............................TCTTCGTCAGCCTTCT-CGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000
.........GAACACCGTAATCACCGCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
.................TAATCACCGCGTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
ATACTGTCAGAACACCGTAATCACCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
..................AATCACCGCGTGCTCTTCGTCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000
..................AATCACCGCGTGCTCTTCGTCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
..........AACACCGTAATCACCGCGTGCTCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAGTAAAAAT------------------------TAACT-C-----TTTCCAT....................................................2511.00101000000000
.................................TTCGTCAGCCTTCT-CGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000
..ACTGTCAGAACACCGTAATCAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
ATACTGTCAGAACACCGTAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
...........................GTGCTCTTCGTCAGCCTTCT-CG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
............CACCGTAATCACCGCGTGCTCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
................GTAATCACCGCGTGCTCTTCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
..........................CGTGCTCTTCGTCAGCCTTCT-CGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100000000
......................ACCGCGTGCTCTTCGTCAGCCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.............ACCGTAATCACCGCGTGCTCTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
ATACTGTCAGAACACCGTAATCACCGCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000
.............................GCTCTTCGTCAGCCTTCT-CGGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000
....................TCACCGCGTGCTCTTCGTCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
................................CTTCGTCAGCCTTCT-CGGGCAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50101000000000
droEug1
GTACTGCCAGAACACCGTAATCACCGCCTGCTCTTCGTCGGCCTTCT-CGGGTGAGTAA--AAGG-A-AAGAGTGCCTCT----------------------------------TACAGAGAGAGCATA-----------------------GATGAAGAGAACCTA-------ATCT--GTGTCT-GTGTGTTG-TTGCT--T-----------------------------------------------T------TTGTAT-ATTTGT-------GAAA--T-AATA---AT-------AATAATAAAAACAAGCGCTCACGGGCTTTTTCACAGGCAAAAGTAAGTGAGA------AATACATTAGATGTTATAAAAATTAATTA---TTCTAAA-TT-TTTTGCACTTT-TAAGTTTGAGT------TCA------ACAAACT-------TCTGAG-ATAAA-TTTCAATTTCTTATTGGTCAACAATAGTTGAAAACCTTTCTTATGTTACCATAA--TGTSizeHit CountTotal NormTotal
No Reads
droBia1
GTACTGCCAGAATACCGTAATCACGGCCTGCTCTTCCTCGGCCTTCT-CCGGTGAGTAGAAAGAG------AGCGCCTCT-----------------------------------------------CG-----------------------CTTGAAGAGAACCTA-------ATCT--GTGTCCCCTGTGTTG-TTGCTATT-----------------------------------------------T------TTGTAT-CTTTGT-------GAAA-----ATAATAAT---AATAAATAATAAAAACAAGCGCTCACGGGCTTTTTCACAGGCAAAAGTAAGTGAAA------AGTAGAATGGATGTTTA-GAA----AATGTTTTT-TAAAATTATTCAGCACATTTCCAATTTGAGT------TTG------AA-------------G-----------------------------------------AAAATTATTGTTA--TTATCGTAAAAAAASizeHit CountTotal NormTotal
No Reads
droTak1
GTACTGCCAAAACACCGTAATCACGGCCTGCTCTTCCTCGGCCTTCT-CGGGTGAGTAAAAAGAG------AGCGCCACT-----------------------------------------------CG-----------------------GGCGAAGAGAACCTA-------ATCT--GCTT---------TGCTTGCTTTT-----------------------------------------------T------TTGTAT-CTTTGT-------GAAA-----ATAATAATAATAATAAATAATAAAAACAAGCGCTCACGGGCATTTTCACAGGCAAAAGTAAGTGGAA------AGTAGAATGGATGTTTTAGAAAAA-AATATTATT-TAAA-TT-TTGCGCACTTTTCAAATATTAAG-----TTAA------AT-AATT-------TTAAAAAC-TAATTTCAAAATTCTTATTGGTC--------------------------TTAA-------AATSizeHit CountTotal NormTotal
No Reads
droEle1
GTACTGCCAGAACACGGTGGTCACCGCGTGCTCTTCGTCAACCTTCT-CCGGTGAGTAA--AGAG------AACGC-TCT----------------------------------G--AGAGAGAGCATG-----------------------GGTGAAGAGAACCTA-------ATTT--TTGTTC-GTGTATTG-TTGCT--T------------------------------------------------------TTGTAC-CTTTAT-------AAAA--T-AATA---------------------AACAAGCGCTCACTGGCTTTTTCACAGGAAAAAGTAAGTTTAA------AGTAAATTAGATGTTTT------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GTACTGCCAGAGCAATGTGGTCACCGCCTGCGCTTCGTCGACCTTCT-CCGGTGAGTAA--AGAG------AAAGC-TCT----------------------------------AAGAGAGAGAGCATG-----------------------TGTGAAGAGAACCTA-------ATTT--GTGTTT-GTGTGTTG-TTGCC--T-----------------------------------------------C------TTGTAT-CTTTGT-------AAAA--T-AACA---------------------AACAAGCGCTCACTGGCTTTTTCACAGGAAAAAGTAAGTTAAA------AGAACATTGGATGTTTTGGAAATAAAATG---ATATA-A-CA-TTCTGCACTATTCTAGTTTATGT------TAA------AA-AACT-------TAAAAT-CTTAA-C-TCCAATACCTTCT--------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GTATTGCCAAAACACTGTTATCACCGCTTGCGCTTCGTCAGCCTTCT-CCGGTGAGTAC--AGAG-A----AAAGCCTCT----------------------------------AAGGGAAAGAGCATG-----------------------GGTGAAGAGAACATA-------ATTT--GTTTTT-GTTTGTTG-TTGCC--T-----------------------------------------------C------TTTAAT-CTTTT--------GA-----AAATA-----------------AAAGTACAAGCGCTCACTGGCTTTTTTACAGGCAAAAGTAAGTGACA------AATATTTTAAATGTTTAAGAAA---AATC--------------------------TAAGTTCGAAT------TCACGTTAAAA-CA-TTCTGTAGTGAAAT-C-----TTTAC------TACTG-TT--------------------------TAGC-------ACCSizeHit CountTotal NormTotal
No Reads
droKik1
GTTCTGCCAGAATAACGTGGTTACCGCCTGCTCTTCGTCGACCTTCT-CCGGTGAGTAC--AAAG------TGCGC-TCG--------------------------------CAGTGAAAAAGAGCATG-----------------------TGTGAAGAGAATTTA-------AATT--GTGTTT-ATGCGTTG-TTGTT--T------------------------------------------------------TTGTAT-CTTTGT-------TCA----------------------ATAATAAAAACAAGCGCTCACGGGCTTTTTCACAGGCAAAAGTAAGTGAAA------AATGCAGTAAATGTTTTTAGAA---C------T-----------TCTACATTTTTTGTA---TAGTTAT---TTAA-----AG-------------TAACA-T-----TTTTTGATATGCACAT-TT----------GAGAA-----------TTAT-------TTCSizeHit CountTotal NormTotal
No Reads
droAna3
GTACTGCCAAAACAGCGTGCTCACCGCCTGCTCTTCGTCGACCTTCT-CAGGTAAGTAGCAC---AC----TCCGC---TCACCC-----------------------------GCAGGTGAGAGCCTG-----------------------TGTGAAGAGAGTTTA-------ACTT--GTGTTT-GCGTATTG-TCGTT--G------------------------------------------------TTGCTTT----T-CTTTGT-------AAAA--T-AATA---------------------AACAAGCACTCACGGGCTTTTTCTCAGGCGAATGTAAGTAGTTAGATGACGTAAATTAAATAAAT---------------------------TTTGGAACTA-------------GAACAC------------------------AAACA-----------CAATTCTTA----------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................GCTCACCGCCTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21111.0011910010
.....................CACCGCCTGCTCTTCGTCGACCTTCT-CA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.003300000
..............GCGTGCTCACCGCCTGCTCTTCGTCGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2913.003300000
................................CTTCGTCGACCTTCT-CAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003300000
..............GCGTGCTCACCGCCTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002200000
........................CGCCTGCTCTTCGTCGACCTTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002110000
.....................CACCGCCTGCTCTTCGTCGACCTTCT-CAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.002100001
.................TGCTCACCGCCTGCTCTTCGTCGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002200000
.............................GCTCTTCGTCGACCTTCT-CA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002020000
..................GCTCACCGCCTGCTCTTCGTCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
................GTGCTCACCGCCTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002110000
GTACTGCCAAAACAGCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
.....................CACCGCCTGCTCTTCGTCGACCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
..................GCTCACCGCCTGCTCTTCGTCGACCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002200000
..................GCTCACCGCCTGCTCTTCGTCGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002000011
....................TCACCGCCTGCTCTTCGTCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..................GCTCACCGCCTGCTCTTCGTCGACCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.....................CACCGCCTGCTCTTCGTCGACCTTCT-C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.................TGCTCACCGCCTGCTCTTCGTCGACCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
.........AAACAGCGTGCTCACCGCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
GTACTGCCAAAACAGCGTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.............AGCGTGCTCACCGCCTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.....................CACCGCCTGCTCTTCGTCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.............AGCGTGCTCACCGCCTGCTCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
GTACTGCCAAAACAGCGTGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
............................TGCTCTTCGTCGACCTTCT-CAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
..........................................................................................................................................................................................................................................................................................................................................................AAGTAGTTAGATGACGTAAAT................................................................................................................................................................2111.001000010
.................TGCTCACCGCCTGCTCTTCGTCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.........................GCCTGCTCTTCGTCGACCTTCT-CA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.......................CCGCCTGCTCTTCGTCGACCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...........................CTGCTCTTCGTCGACCTTCT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
GTACTGCCAAAACAGCGTGCTCACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.....................CACCGCCTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
........AAAACAGCGTGCTCACCGCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
..............GCGTGCTCACCGCCTGCTCTTCGTCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
....TGCCAAAACAGCGTGCTCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
..............GCGTGCTCACCGCCTGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
..............GCGTGCTCACCGCCTGCTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
................................................................................................................................................................................................................................................................................................TA---------------------AACAAGCACTCACGGGC.......................................................................................................................................................................................................1911.001010000
......................ACCGCCTGCTCTTCGTCGACCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.............................GCTCTTCGTCGACCTTCT-CAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..ACTGCCAAAACAGCGTGCTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
...................CTCACCGCCTGCTCTTCGTCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.................TGCTCACCGCCTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
........................CGCCTGCTCTTCGTCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000
.............AGCGTGCTCACCGCCTGCTCTTCGTCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
......................ACCGCCTGCTCTTCGTCGACCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..............................CTCTTCGTCGACCTTCT-CAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..........AACAGCGTGCTCACCGCCTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
.............................................................................................................................................................................................................................................................................................................................CACTCACGGGCTTTTTCTCAG.............................................................................................................................................................................................2111.001000001
.........................................................................................................................................................................................T-GCGTATTG-TCGTT--G------------------------------------------------TTGCTT.............................................................................................................................................................................................................................................................................2111.001100000
droBip1
GTACTGCCAGAACAGCGTGCTCACCGCCTGCTCTTCGTCGACCTTCT-CAGGTAAGTAGCAC---AC----TCCGC---TCACCT-----------------------------ACAGGTGAGAGCATG-----------------------TGCGAAGAGAGTTTA-------ATTT--GTGTTT-GCGTATTG-TCGTT--G------------------------------------------------TTGCTTT----T-CTTTGT-------AAAA--T-AATA---------------------AACAAGCACTCACGGGCTTTTTCTCAGGCGAATGTAAGTAATTAGACGACGTAA-------------------------------------------------------CTTAAAAAAAAT------------------------CG--------------------------------------------------------------------ASizeHit CountTotal NormTotal
No Reads
dp5
GTATTGCCACAACAGCGTGGTTACCGCCTGCTCTTCGTCGACCTTCT-CTGGTGAGTAACAAAAG------AGCGCGTGA----------------------------------AAAA--GAGAGTGCA-----------------------TGTGAAGAGAACCTA-------ACTGATGTGATT-GTGTGTTG-TTTCT--C------------------------------------------------TTGCCTTTGAAT-T-TTAT-------GC-----AAATA---------------------AACAAGCGCTCACGGGCTTTTTCACAGGCGAAAGTAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
GTATTGCCACAACAGCGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19142.004204200000000
................................CTTCGTCGACCTTCT-CTGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20131.003102800003000
..................GGTTACCGCCTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21113.001301110001000
...................GTTACCGCCTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20110.001001000000000
..................GGTTACCGCCTGCTCTTCGTCGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2519.0090900000000
.................................TTCGTCGACCTTCT-CTGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1918.0080800000000
..........AACAGCGTGGTTACCGCCTGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2217.0070600001000
.TATTGCCACAACAGCGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1816.0060600000000
.....................TACCGCCTGCTCTTCGTCGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2215.0050500000000
.....................TACCGCCTGCTCTTCGTCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.0050500000000
..........AACAGCGTGGTTACCGCCTGCTCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040300001000
..................GGTTACCGCCTGCTCTTCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.0040400000000
.........................GCCTGCTCTTCGTCGACCTTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000011010
..................GGTTACCGCCTGCTCTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030300000000
..........AACAGCGTGGTTACCGCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030300000000
GTATTGCCACAACAGCGTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030300000000
GTATTGCCACAACAGCGTGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030300000000
................................CTTCGTCGACCTTCT-CTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.0030300000000
................GTGGTTACCGCCTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030200100000
................................CTTCGTCGACCTTCT-CTGGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030300000000
................GTGGTTACCGCCTGCTCTTCGTCGACCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030100000020
...........ACAGCGTGGTTACCGCCTGCTCTTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020200000000
................GTGGTTACCGCCTGCTCTTCGTCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020200000000
...................GTTACCGCCTGCTCTTCGTCGACCTTCT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020200000000
.................TGGTTACCGCCTGCTCTTCGTCGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020200000000
..................GGTTACCGCCTGCTCTTCGTCGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020200000000
..................GGTTACCGCCTGCTCTTCGTCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020200000000
GTATTGCCACAACAGCGTGGTT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
GTATTGCCACAACAGCGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
....................TTACCGCCTGCTCTTCGTCGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..............GCGTGGTTACCGCCTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
........................CGCCTGCTCTTCGTCGACCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...............................TCTTCGTCGACCTTCT-CTGGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
........................CGCCTGCTCTTCGTCGACCTTCT-CTGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
................GTGGTTACCGCCTGCTCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...................GTTACCGCCTGCTCTTCGTCGACCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..........AACAGCGTGGTTACCGCCTGCTCTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.........................GCCTGCTCTTCGTCGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
......................ACCGCCTGCTCTTCGTCGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.........................GCCTGCTCTTCGTCGACCTTCT-CTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.....GCCACAACAGCGTGGTTACCGCCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
................................................................................................................................................................................TGATGTGATT-GTGTGTTG-TTTC.......................................................................................................................................................................................................................................................................................................................................2211.0010000010000
..........AACAGCGTGGTTACCGCCTGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.......CACAACAGCGTGGTTACCGCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
............................TGCTCTTCGTCGACCTTCT-CTGGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..........AACAGCGTGGTTACCGCCTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.........................GCCTGCTCTTCGTCGACCTTCT-CTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
......................................................................................................................................................................................GATT-GTGTGTTG-TTTCT--C------------------------------------------------TTGCC..............................................................................................................................................................................................................................................................................2311.0010010000000
...................GTTACCGCCTGCTCTTCGTCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
...........................CTGCTCTTCGTCGACCTTCT-CT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
...................GTTACCGCCTGCTCTTCGTCGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.............AGCGTGGTTACCGCCTGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.............................GCTCTTCGTCGACCTTCT-CTGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.................TGGTTACCGCCTGCTCTTCGTCGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.................................TTCGTCGACCTTCT-CTGGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................TGCTCTTCGTCGACCTTCT-C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
......................ACCGCCTGCTCTTCGTCGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.....................TACCGCCTGCTCTTCGTCGACCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
................GTGGTTACCGCCTGCTCTTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
......................ACCGCCTGCTCTTCGTCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..................GGTTACCGCCTGCTCTTCGTCGACCTTCT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000000
..........AACAGCGTGGTTACCGCCTGCTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
........ACAACAGCGTGGTTACCGCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.........CAACAGCGTGGTTACCGCCTGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
....................................................................................................................................................................CTA-------ACTGATGTGATT-GTGTGT..............................................................................................................................................................................................................................................................................................................................................2111.0010010000000
.......................CCGCCTGCTCTTCGTCGACCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..........................CCTGCTCTTCGTCGACCTTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000001000
..................GGTTACCGCCTGCTCTTCG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...................GTTACCGCCTGCTCTTCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..........AACAGCGTGGTTACCGCCTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010010000000
.......................CCGCCTGCTCTTCGTCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
........ACAACAGCGTGGTTACCGCCTGCTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.............AGCGTGGTTACCGCCTGCTCTTCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
........................CGCCTGCTCTTCGTCGACCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..........................CCTGCTCTTCGTCGACCTTCT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
...............CGTGGTTACCGCCTGCTCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...........ACAGCGTGGTTACCGCCTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
...................GTTACCGCCTGCTCTTCGTCGACCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
............CAGCGTGGTTACCGCCTGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
...................GTTACCGCCTGCTCTTCGTCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
....................TTACCGCCTGCTCTTCGTCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..................GGTTACCGCCTGCTCTTCGTCGACCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
..................................TCGTCGACCTTCT-CTGGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.2510100000000
droPer2
GTATTGCCACAACAGCGTGGTTACCGCCTGCTCTTCGTCGACGTTCT-CTGGTGAGTAACAAAAG------AGCGCGTGA----------------------------------AAAA--GAGAGTGCA-----------------------TGTGAAGAGAACCTA-------ACTGATGTGATT-GTGTGTTA-TTTCT--C------------------------------------------------TTGCCTTTGAAT-T-TTAT-------GC-----AAATA---------------------AACAAGCGCTCACGGGCTTTTTCACAGGCGAAAGTAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................GTTACCGCCTGCTCTTCGTCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23123.00232200001
................................CTTCGTCGACGTTCT-CTGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20122.00221543000
.....................TACCGCCTGCTCTTCGTCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21110.00101000000
...................GTTACCGCCTGCTCTTCGTCGACGTTCT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2818.008800000
.....................TACCGCCTGCTCTTCGTCGACGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2418.008800000
..................GGTTACCGCCTGCTCTTCGTCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2417.007610000
................................CTTCGTCGACGTTCT-CTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1917.007610000
..................GGTTACCGCCTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2115.005140000
...................GTTACCGCCTGCTCTTCGTCGACGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.004400000
...............................TCTTCGTCGACGTTCT-CTGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.004201001
.......................CCGCCTGCTCTTCGTCGACG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.003210000
.....................TACCGCCTGCTCTTCGTCGACGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.003300000
.........................GCCTGCTCTTCGTCGACGTTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003000003
..................GGTTACCGCCTGCTCTTCGTCGACGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002200000
..................GGTTACCGCCTGCTCTTCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
.....................TACCGCCTGCTCTTCGTCGACG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002200000
...TTGCCACAACAGCGTGGTTACCGCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002020000
....................TTACCGCCTGCTCTTCGTCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002200000
..........AACAGCGTGGTTACCGCCT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002020000
.............................GCTCTTCGTCGACGTTCT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002200000
......................ACCGCCTGCTCTTCGTCGACGTTCT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002200000
..................GGTTACCGCCTGCTCTTCGTCGACGTTCT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.002200000
................GTGGTTACCGCCTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.........................GCCTGCTCTTCGTCGACGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.........................GCCTGCTCTTCGTCGACGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
...........................CTGCTCTTCGTCGACGTTCT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.............................GCTCTTCGTCGACGTTCT-CTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
..........AACAGCGTGGTTACCGCCTGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.....................TACCGCCTGCTCTTCGTCGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
....................TTACCGCCTGCTCTTCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
............................TGCTCTTCGTCGACGTTCT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...................GTTACCGCCTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
GTATTGCCACAACAGCGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...................................................................................................................AAA--GAGAGTGCA-----------------------TGTGAAGAGAACCT.........................................................................................................................................................................................................................................................................................................................................................................2611.001000001
...........................................................CAAAAG------AGCGCGTGA----------------------------------AAAA--GAGA...................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..................GGTTACCGCCTGCTCTTCGTCGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000
...................GTTACCGCCTGCTCTTCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
..............................................................................................................................................................GAGAACCTA-------ACTGATGTGATT-GTGTGTT.............................................................................................................................................................................................................................................................................................................................................2811.001000001
........................CGCCTGCTCTTCGTCGACGTTCT-CTGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.........................GCCTGCTCTTCGTCGACGTTCT-CTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..........AACAGCGTGGTTACCGCCTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001010000
.....................TACCGCCTGCTCTTCGTCGACGTTCT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000
........................CGCCTGCTCTTCGTCGACGTTCT-CT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
........................CGCCTGCTCTTCGTCGACGTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
......................................................................................................................................................................A-------ACTGATGTGATT-GTGTGTT.............................................................................................................................................................................................................................................................................................................................................2011.001001000
.......................CCGCCTGCTCTTCGTCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droWil2
ATATTGCCAGAACAGTGTGATTACGGCGTGCTCTTCGTCGACCTTCT-CTGGTAAGTAA--GAGC------A------------------------------------------ACAGAAACAAACATAAATGAAGAGAGAGCGTTATTTTGAAAAGAGAGAGTTTA-------ACTT--ATATTG---AAATTG-TATTT--A------------------------------------------------TTGTATATGTAT-TTT----------AA-----AAATA---------------------AACAAGCGCTCACGGGCTTTTTCACAGGCGAAAGTAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................GATTACGGCGTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21119.0019071110
.TATTGCCAGAACAGTGTGATTACGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26114.0014031100
.TATTGCCAGAACAGTGTGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19111.001105510
..................GATTACGGCGTGCTCTTCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2019.00901701
.........GAACAGTGTGATTACGGCGTGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2319.00900900
..................GATTACGGCGTGCTCTTCGTCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2419.00933300
....................TTACGGCGTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1918.00803500
...........................GTGCTCTTCGTCGACCTTCT-CTGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2516.00613200
..................GATTACGGCGTGCTCTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1815.00513010
...................ATTACGGCGTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2015.00501310
.........GAACAGTGTGATTACGGCGTGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2415.00501400
........................GGCGTGCTCTTCGTCGACCTTCT-CTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.00404000
.........GAACAGTGTGATTACGGCGTGCTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.00411200
...............................TCTTCGTCGACCTTCT-CTGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.00411200
...........ACAGTGTGATTACGGCGTGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.00401300
...........ACAGTGTGATTACGGCGTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2814.00401300
................GTGATTACGGCGTGCTCTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.00402200
................................CTTCGTCGACCTTCT-CTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.00301110
.........GAACAGTGTGATTACGGCGTGCTCTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.00302100
................GTGATTACGGCGTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.00302100
..............GTGTGATTACGGCGTGCTCTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.00300300
.TATTGCCAGAACAGTGTGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00300300
.......CAGAACAGTGTGATTACGGCGTGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.00300210
................................CTTCGTCGACCTTCT-CTGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00321000
..ATTGCCAGAACAGTGTGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.00301200
....TGCCAGAACAGTGTGATTACGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.00300300
..ATTGCCAGAACAGTGTGATTACGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.00300210
.........GAACAGTGTGATTACGGCGTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200200
.......CAGAACAGTGTGATTACGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200101
.TATTGCCAGAACAGTGTGATTACGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200110
......CCAGAACAGTGTGATTACGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00220000
......................ACGGCGTGCTCTTCGTCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00220000
...........ACAGTGTGATTACGGCGTGCTCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00201100
.........GAACAGTGTGATTACGGCGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200200
...........ACAGTGTGATTACGGCGTGCTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00200200
.............AGTGTGATTACGGCGTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00201100
.........GAACAGTGTGATTACGGCGTGCTCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200200
..ATTGCCAGAACAGTGTGATTACGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00201010
...............................TCTTCGTCGACCTTCT-CTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200101
.......CAGAACAGTGTGATTACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200002
..................GATTACGGCGTGCTCTTCGTCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200200
.TATTGCCAGAACAGTGTGATTAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00201010
............CAGTGTGATTACGGCGTGCTCTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200200
.........................GCGTGCTCTTCGTCGACCTTCT-CTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00202000
..........................CGTGCTCTTCGTCGACCTTCT-CTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
...............TGTGATTACGGCGTGCTCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
....................TTACGGCGTGCTCTTCGTCGACCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
.........GAACAGTGTGATTACGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
........................GGCGTGCTCTTCGTCGACCTTCT-CTGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
.............AGTGTGATTACGGCGTGCTCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
ATATTGCCAGAACAGTGTGATTACGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
....................TTACGGCGTGCTCTTCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100
........................GGCGTGCTCTTCGTCGACCTTCT-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
....TGCCAGAACAGTGTGATTACGGCGTGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
...........................GTGCTCTTCGTCGACCTTCT-C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
..............GTGTGATTACGGCGTGCTCTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
...................ATTACGGCGTGCTCTTCGTCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00110000
.TATTGCCAGAACAGTGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100
........AGAACAGTGTGATTACGGCGTGCTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
............................TGCTCTTCGTCGACCTTCT-CTGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000
.TATTGCCAGAACAGTGTGATTACGGCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
...........ACAGTGTGATTACGGCGTGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
..ATTGCCAGAACAGTGTGATTACGGCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000
.....................TACGGCGTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000
............CAGTGTGATTACGGCGTGCTCTTCGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
............CAGTGTGATTACGGCGTGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
.................TGATTACGGCGTGCTCTTCGTCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
..........................CGTGCTCTTCGTCGACCTTCT-CTGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
.......................................GACCTTCT-CTGGTAAGTAA--GAGC------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
........AGAACAGTGTGATTACGGCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
............CAGTGTGATTACGGCGTGCTCTTCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
..ATTGCCAGAACAGTGTGATTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
.......CAGAACAGTGTGATTACGGCGTGCTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000
...........................GTGCTCTTCGTCGACCTTCT-CTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
.....GCCAGAACAGTGTGATTACGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.............................GCTCTTCGTCGACCTTCT-CTGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
..............GTGTGATTACGGCGTGCTCTTCGTCGACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100
..............GTGTGATTACGGCGTGCTCTTCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
..................GATTACGGCGTGCTCTTCGTCGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
ATATTGCCAGAACAGTGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
....................TTACGGCGTGCTCTTCGTCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
..ATTGCCAGAACAGTGTGATTAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
.....................TACGGCGTGCTCTTCGTCGAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
.TATTGCCAGAACAGTGTGATTACGGCGTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100
........................GGCGTGCTCTTCGTCGACCTTCT-CT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
................GTGATTACGGCGTGCTCTTCGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
...................................................GTAAGTAA--GAGC------A------------------------------------------ACAGAAACA....................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000
.................................TTCGTCGACCTTCT-CTGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50101000
droVir3
GCA----------------------GTCTGCTTGCGGACAAACTGCTAACGGTGAGTACTCC---AC----ACAAA---ATCCCAAAGAGCGAGAGATTGACTGAGCGCACGA-ATGG--AA-------------GAGTGTG-----------AAAGAGAGTGATTG--------------TATAT-GTGTGTGT-GTGCC--T------GTGTG--TGATTACTCGTTCCGGTTTTAACTGTAACTGTGTCTTGCTTCTGAATATTTTAT-AATTTTAA-----AAATA---------------------AACAAGCGCTCATGGCCTTTTTCTCAGACGAAAGTAAGCGAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................CTGCTTGCGGACAAACTGCTAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2314.004002000000000000110000000000000000000000000000000000000000000000
...................................GGACAAACTGCTAACGGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003002000000000000000000010000000000000000000000000000000000000000
...................................GGACAAACTGCTAACGGTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.003003000000000000000000000000000000000000000000000000000000000000
............................TGCTTGCGGACAAACTGCTAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.003000000000000001000100000000000000000100000000000000000000000000
................................TGCGGACAAACTGCTAACGGTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002002000000000000000000000000000000000000000000000000000000000000
...........................CTGCTTGCGGACAAACTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002100000000000000000000000000001000000000000000000000000000000000
...........................CTGCTTGCGGACAAACTGCTAACGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002001000000000010000000000000000000000000000000000000000000000000
.................................GCGGACAAACTGCTAACGGTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002001000000000000000000000000000000000100000000000000000000000000
............................TGCTTGCGGACAAACTGCTAACGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002000000000000000000000000000000020000000000000000000000000000000
...................................GGACAAACTGCTAACGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002001000000000001000000000000000000000000000000000000000000000000
............................TGCTTGCGGACAAACTGCTAACGGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................GCC--T------GTGTG--TGATTACTCGTTCC........................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.............................GCTTGCGGACAAACTGCTAACGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000010000000000000000000000000000
..A----------------------GTCTGCTTGCGGACAAACTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..........................TCTGCTTGCGGACAAACTGCTAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TTCCGGTTTTAACTGTAACTGG......................................................................................................................................................................................................................................................................................2211.001010000000000000000000000000000000000000000000000000000000000000
..................................CGGACAAACTGCTAACGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TAACTGTAACTGTGTCTTGCTTCT...........................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.............................GCTTGCGGACAAACTGCTAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001000000000000000000000000000000000000000000000000000000000
...............................TTGCGGACAAACTGCTAACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000001000000000000000000000000000000
................................TGCGGACAAACTGCTAACGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TTCCGGTTTTAACTGTAACTGTGTCTTGCTTCT...........................................................................................................................................................................................................................................................................3311.001000000000000000000000000000000000000000000000000000000000010000
..A----------------------GTCTGCTTGCGGACAAACTGCTAACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...........................CTGCTTGCGGACAAACTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................CGTTCCGGTTTTAACTGTA...........................................................................................................................................................................................................................................................................................1911.001010000000000000000000000000000000000000000000000000000000000000
...........................CTGCTTGCGGACAAACTGCTAACGGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000010000000000000000000000000000
......................................................................................AGAGCGAGAGATTGACTGAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.........................GTCTGCTTGCGGACAAACTGCTAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..................................CGGACAAACTGCTAACGGTGGTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TTTCTCAGACGAAAGTAAG..................................................................................................................................................................................1911.001000000000000000000000010000000000000000000000000000000000000000
...............................TTGCGGACAAACTGCTAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000100000000000000000000000000000000000000000000000
......................................CAAACTGCTAACGGTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.672001000000000000000000000000000100000000000000000000000000000000
...................................GGACAAACTGCTAACGGTGGTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.501001000000000000000000000000000000000000000000000000000000000000
droMoj3
CT---GCCAAGTAGACGT----TCAGTCTGCTTGCGGACAGAGTGCCAACGGTGAGTAC--AAAAAGAAAAAATACTGTA--TGAA---ATAAGAGAATGAATGAGCGCACGA-ATGG--AA-------------GAGAGTG-----------CAAGAGAGCGATTGAATGATTATTAGTATGAGC-GTGTGTTA-GTGTG--CGTGTTTGTGTGCATGAGCAGTTGATCCGGTTTTAACTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACTGTGTATTG-TT--------------------------TTCT-------GAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............GACGT----TCAGTCTGCTTGCGGACAGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2719.009100008
................GT----TCAGTCTGCTTGCGGACAGAGTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2616.006300003
...............CGT----TCAGTCTGCTTGCGGACAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2316.006600000
.............GACGT----TCAGTCTGCTTGCGGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2215.005300011
.............GACGT----TCAGTCTGCTTGCGGACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2315.005500000
..............................................................................................AGAATGAATGAGCGCACAC-.............................................................................................................................................................................................................................................................................................................................................................................................................................1925.0010900001
...........................CTGCTTGCGGACAGAGTGCCAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2315.005300101
................GT----TCAGTCTGCTTGCGGACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2015.005500000
...............CGT----TCAGTCTGCTTGCGGACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.004400000
...........................CTGCTTGCGGACAGAGTGCCAACGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.004300001
...........................CTGCTTGCGGACAGAGTGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.004000103
................GT----TCAGTCTGCTTGCGGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.004400000
................GT----TCAGTCTGCTTGCGGACAGAGTGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.004200002
...............CGT----TCAGTCTGCTTGCGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.004400000
...............CGT----TCAGTCTGCTTGCGGACAGAGTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2714.004400000
.............GACGT----TCAGTCTGCTTGCGGACAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.003300000
................GT----TCAGTCTGCTTGCGGACAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.003300000
...............CGT----TCAGTCTGCTTGCGGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.003300000
...............CGT----TCAGTCTGCTTGCGGACAGAGTGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.003300000
...............................TTGCGGACAGAGTGCCAACGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002100001
................GT----TCAGTCTGCTTGCGGACAGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002100001
.............GACGT----TCAGTCTGCTTGCGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
.............GACGT----TCAGTCTGCTTGCGGACAGAGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.002200000
.............................GCTTGCGGACAGAGTGCCAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002100001
......................TCAGTCTGCTTGCGGACAGAGTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
.............................GCTTGCGGACAGAGTGCCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002100001
...........................CTGCTTGCGGACAGAGTGCCAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002200000
...........................CTGCTTGCGGACAGAGTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000002
............AGACGT----TCAGTCTGCTTGCGGACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
................................TGCGGACAGAGTGCCAACGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
.........................GTCTGCTTGCGGACAGAGTGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002100001
...............CGT----TCAGTCTGCTTGCGGACAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002200000
..............ACGT----TCAGTCTGCTTGCGGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
.............GACGT----TCAGTCTGCTTGCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
.............GACGT----TCAGTCTGCTTGCGGACAGAGTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000001
............AGACGT----TCAGTCTGCTTGCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.............................GCTTGCGGACAGAGTGCCAACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
.T---GCCAAGTAGACGT----TCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000010
..........................TCTGCTTGCGGACAGAGTGCCAACGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
............AGACGT----TCAGTCTGCTTGCGGAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
...............CGT----TCAGTCTGCTTGCGGACAGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.............GACGT----TCAGTCTGCTTGCGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.......................................................................................................................................GAGAGTG-----------CAAGAGAGCGATTG........................................................................................................................................................................................................................................................................................................................................................................2111.001000010
...........................................................................................................................................................AGAGAGCGATTGAATGATTATTA.............................................................................................................................................................................................................................................................................................................................................................2311.001100000
..............ACGT----TCAGTCTGCTTGCGGACAGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
..............ACGT----TCAGTCTGCTTGCGGACAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
..................................CGGACAGAGTGCCAACGGTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
......................TCAGTCTGCTTGCGGACAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.....................................................................................................................................................................................................................TGCATGAGCAGTTGATCCGG......................................................................................................................................................................................................................................................................................................2011.001000001
............................TGCTTGCGGACAGAGTGCCAACGGTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
........................AGTCTGCTTGCGGACAGAGTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
......................TCAGTCTGCTTGCGGACAGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
............AGACGT----TCAGTCTGCTTGCGGACAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000001
.........................................................................................ATAAGAGAATGAATGAGCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100
............................TGCTTGCGGACAGAGTGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..........................TCTGCTTGCGGACAGAGTGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.......................CAGTCTGCTTGCGGACAGAGTGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
.T---GCCAAGTAGACGT----TCAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.................T----TCAGTCTGCTTGCGGACAGAGTGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000
...............CGT----TCAGTCTGCTTGCGGACAGAGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
.........................GTCTGCTTGCGGACAGAGTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.........................GTCTGCTTGCGGACAGAGTGCCAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.............GACGT----TCAGTCTGCTTGCGGACAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
................................................................................................................................................................................................................TTGTGTGCATGAGCAGTTGATCCGG......................................................................................................................................................................................................................................................................................................2511.001000001
.........................................................................TACTGTA--TGAA---ATAAGAGAATGAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000001
................GT----TCAGTCTGCTTGCGGACAGAGTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..............ACGT----TCAGTCTGCTTGCGGACAGAGTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.............................................................................................................................................G-----------CAAGAGAGCGATTGAATG....................................................................................................................................................................................................................................................................................................................................................................1911.001000001
.............GACGT----TCAGTCTGCTTGCGGACAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
............................................................................................................................................................................TTATTAGTATGAGC-GTGTG...............................................................................................................................................................................................................................................................................................................................................1911.001000010
......................TCAGTCTGCTTGCGGACAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
............................TGCTTGCGGACAGAGTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
............AGACGT----TCAGTCTGCTTGCGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.............................GCTTGCGGACAGAGTGCCAACGGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.................T----TCAGTCTGCTTGCGGACAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
............AGACGT----TCAGTCTGCTTGCGGACAGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
...........................CTGCTTGCGGACAGAGTGCCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
...................................GGACAGAGTGCCAACGGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
..............ACGT----TCAGTCTGCTTGCGGACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..............................................................................................AGAATGAATGAGCGCACA...............................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.....................................................................................................................................................................................TGAGC-GTGTGTTA-GTGTG--CGT.................................................................................................................................................................................................................................................................................................................................2120.501000001
...................................GGACAGAGTGCCAACGGTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501100000
...............................................................................................GAATGAATGAGCGCACAC-.............................................................................................................................................................................................................................................................................................................................................................................................................................18170.122200000
droGri2
CT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGTCT---G---TC-TTGCC--T------------------------------------------------------TTGATT-ATTAATTAATTTTAA-----AAATA---------------------AACAAGCAATCATGGCCTTTTTCTCAGACGAAAGTAAGCGAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................................................................................................................GTGTCT---G---TC-TTGCC--T------------------------------------------------------TTGA.........................................................................................................................................................................................................................................................................1911.00110

Generated: 05/19/2015 at 03:39 PM