ID:dsi_4140 |
Coordinate:3l:7515718-7515867 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
intergenic
No Repeatable elements found
|
TATCTATTGTAATTCCCCAATCGTACTTGATGCTAACTAAAGTGATATTTCAAATTCGTTTCGTTTGTTCTTGTTTCGATTGTCTGTAAATCATTCATTATCATTTCGTTTGTAGATTAATATAACGTAGTTCTAGGTCACTTTTGTGTTTGTTCCTCGCATAACTGGAGCTCGTCTAACATTGGATTTATTTATTGCAGAAACCCTTCAGGAAAGAAAAGTAGACCTATCCAGTCTGGATACCGCAAAG
**************************************************(((..(((...((........))...)))))).((((((.................((((.(((......))))))).((((((((.......((((((.........)))))))))))))).(((((....))))).......))))))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | M023 head |
M025 embryo |
SRR553488 RT_0-2 hours eggs |
SRR553487 NRT_0-2 hours eggs |
SRR553486 Makindu_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|---|
| .....................................................................................................................TAATATAACGTAGTTCTAGGTA............................................................................................................... | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 |
| .............................................................................................................................................................................................................CTTCAGGAAAGAAAAGTAGACC....................... | 22 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| ...........................................................................................................................................................................................................CCCTTCAGGAAAGAAAAGTAGACC....................... | 24 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..........................................................................................................................................................................................................ACCCATCAGGAAAGA................................. | 15 | 1 | 3 | 0.33 | 1 | 0 | 0 | 0 | 1 | 0 |
| .........................................................................................................................................................................................................TACCCATCAGGAAAGA................................. | 16 | 2 | 20 | 0.15 | 3 | 0 | 0 | 0 | 3 | 0 |
| ..........................................................................................................................................................................................................ACCCATCAGGAAATAAAAGA............................ | 20 | 3 | 20 | 0.05 | 1 | 0 | 0 | 0 | 0 | 1 |
|
ATAGATAACATTAAGGGGTTAGCATGAACTACGATTGATTTCACTATAAAGTTTAAGCAAAGCAAACAAGAACAAAGCTAACAGACATTTAGTAAGTAATAGTAAAGCAAACATCTAATTATATTGCATCAAGATCCAGTGAAAACACAAACAAGGAGCGTATTGACCTCGAGCAGATTGTAACCTAAATAAATAACGTCTTTGGGAAGTCCTTTCTTTTCATCTGGATAGGTCAGACCTATGGCGTTTC
**************************************************(((..(((...((........))...)))))).((((((.................((((.(((......))))))).((((((((.......((((((.........)))))))))))))).(((((....))))).......))))))************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553486 Makindu_3 day-old ovaries |
SRR553488 RT_0-2 hours eggs |
SRR553487 NRT_0-2 hours eggs |
M024 male body |
SRR618934 dsim w501 ovaries |
|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................TTAGTAAGTAATAGTAAAGCAAACAT........................................................................................................................................ | 26 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..........................................................................................................................ATTGCATCAAGATCCAGTGAAAACACAAA................................................................................................... | 29 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| ..............................................................................................................................................................................................AAATAACGTCTTTGGGAAGTCCTTTCTT................................ | 28 | 0 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| ...................................................................................................................................AGATCCAGTCAAAACA....................................................................................................... | 16 | 1 | 3 | 0.67 | 2 | 0 | 0 | 2 | 0 | 0 |
| ..........................................ACCATAAAGTTTCAGCAA.............................................................................................................................................................................................. | 18 | 2 | 11 | 0.09 | 1 | 0 | 0 | 1 | 0 | 0 |
| ..............................................................................................................................................................................................................................TCTGGAGTGGTCAGACGTA......... | 19 | 3 | 14 | 0.07 | 1 | 0 | 0 | 0 | 1 | 0 |
| ...........................ACTACCATTGATTTC................................................................................................................................................................................................................ | 15 | 1 | 15 | 0.07 | 1 | 0 | 1 | 0 | 0 | 0 |
| .........................................................................................................................................................................................................TTGGGAAGTCGTTTC.................................. | 15 | 1 | 15 | 0.07 | 1 | 0 | 0 | 0 | 0 | 1 |
| ............................................................................................................AAACATCTAGTTATAGT............................................................................................................................. | 17 | 2 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 | 0 |
| .......................................................................................................................................................................................................................................GTCAGACATATGGCGC... | 16 | 2 | 20 | 0.05 | 1 | 0 | 1 | 0 | 0 | 0 |
| ..........................AACTACGATGGATGTC................................................................................................................................................................................................................ | 16 | 2 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 | 0 |
| .......................................................................................................................AAAATTGCATCAAGCTCC................................................................................................................. | 18 | 3 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 | 0 |
Generated: 04/24/2015 at 10:21 AM