ID:

dsi_4133

 Coordinate:

3l:5499108-5499223 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.8 -8.7 -8.6

Flybase annnotation

exon [3l_5499224_5500368_-]; CDS [3l_5499224_5500368_-]; CDS [3l_5498763_5499107_-]; exon [3l_5498649_5499107_-]; intron [3l_5499108_5499223_-]

No Repeatable elements found

mature
  1. 2l:3531182-3531197 +
  2. 2l:9355531-9355546 +
  3. 2l:14186506-14186521 -
  4. 2l:20925846-20925861 +
  5. 2l:22850114-22850129 -
  6. 2r:1782008-1782023 +
  7. 2r:16612256-16612271 -
  8. 3l:3458124-3458139 +
  9. dsi_4133  3l:5499154-5499169 -
  10. 3l:21119283-21119298 +
  11. 3l:23807534-23807549 +
  12. 3l:24158259-24158274 -
  13. 3r:19225468-19225483 -
  14. x:13496683-13496698 +
  15. x:18221853-18221868 +
  16. node_73613:1891-1906 +
  17. node_14847:1810-1825 -
  18. node_47923:1-16 +
  19. node_10155:526-541 +
  20. node_410:37-52 -
star

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------##################################################
TTGTAGTGACTTCGGATCACTCGCACACCATGTCCATTAACGGCTATCCGGTAGGAAACTTATTAGTACATCAAGTAATCAATTTTTTTTCCTTGTTTTGCTTTTTATTGAATCTTCCCTTTTCAACATAATTCTTATATATTTATATTTCTATCTCCTATCCCAGTACCGTCGACAGAACATCCTTTCCCTTGCTCCCAATCTGGCTGATGATGA
**************************************************((((((........((((...((((.((..........)).))))...)))).....(((((.........))))).........((((....))))........)))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M053
female body
 M024
male body		 M025
embryo
 O001
Testis
 SRR553487
NRT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 GSM343915
embryo
 SRR553485
Chicharo_3 day-old ovaries
 SRR553488
RT_0-2 hours eggs
.......GACTTCGGATCACTCGCACACCATGTC...................................................................................................................................................................................... 27 0 1 9.00 9 1 7 1 0 0 0 0 0 0
.......GACTTCGGATCACTCGCACACCATGT....................................................................................................................................................................................... 26 0 1 7.00 7 4 2 1 0 0 0 0 0 0
.......GACTTCGGATCACTCGCACACCAT......................................................................................................................................................................................... 24 0 1 4.00 4 2 1 0 1 0 0 0 0 0
............................................................................................................................................................................CGACAGAACATCCTTTCCCTTG...................... 22 0 1 3.00 3 1 2 0 0 0 0 0 0 0
.........CTTCGGATCACTCGCACACCATGTCC..................................................................................................................................................................................... 26 0 1 3.00 3 2 0 1 0 0 0 0 0 0
................................................................................................................................................................................AGAACATCCTTTCCCTTGCTCCT................. 23 1 1 2.00 2 0 0 2 0 0 0 0 0 0
.....GTGACTTCGGATCACTCGCACACCAT......................................................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0 0 0 0 0
........ACTTCGGATCACTCGCACACCATGTC...................................................................................................................................................................................... 26 0 1 2.00 2 0 2 0 0 0 0 0 0 0
............................................................................................................................................................................CGACAGAACATCCTTTCCCTTGCTCCC................. 27 0 1 2.00 2 1 1 0 0 0 0 0 0 0
............................................................................................................................................................................CGACAGAACATCCTTTCCCT........................ 20 0 1 2.00 2 1 1 0 0 0 0 0 0 0
.......GACTTCGGATCACTCGCACACCATGTCC..................................................................................................................................................................................... 28 0 1 2.00 2 1 1 0 0 0 0 0 0 0
.........CTTCGGATCACTCGCACACC........................................................................................................................................................................................... 20 0 1 2.00 2 0 0 2 0 0 0 0 0 0
............................................................................................................................................................................CGACAGAACATCCTTTCCCTT....................... 21 0 1 2.00 2 2 0 0 0 0 0 0 0 0
.......GACTTCGGATCACTCGCACAC............................................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
......................................................................................................................................................................TACCGTCGACAGAACATCCTTTCC.......................... 24 0 1 1.00 1 1 0 0 0 0 0 0 0 0
..................................................................................................................................................................................................CTCCCAATCTGGCTGATGATG. 21 0 1 1.00 1 1 0 0 0 0 0 0 0 0
............................................................................................................................................................................CGACAGAACATCCTTTCCCTTGCTCC.................. 26 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.............................................................................................................................................................................GACAGAACATCCTTTCCCTT....................... 20 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......GACTTCGGATCACTCACACACCATGTCC..................................................................................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0 0 0 0 0
TTGTAGTGACTTCGGATCACT................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0 0 0 0 0
.......GACTTTGGATCACTCGCACACCATGTC...................................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0 0 0 0 0
.................................................................................................................................................................ATCCGTACCGTCGACAGAAC................................... 20 3 5 1.00 5 0 2 3 0 0 0 0 0 0
.......GACTTCGGATCACTCGCAC.............................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.......GACTTCGGATCACTCGCA............................................................................................................................................................................................... 18 0 1 1.00 1 0 1 0 0 0 0 0 0 0
............................................................................................................................................................................................CCCTTGCTCCCAATCTGGCTGAT..... 23 0 1 1.00 1 1 0 0 0 0 0 0 0 0
.........CTTCGGATCACTCGCACACCATGTC...................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0 0 0
...........................................................................................................................................TAAGTATTTTTCTATCTCCTAT....................................................... 22 3 6 0.17 1 0 0 0 0 0 0 1 0 0
...........TCGGATCCCTCTGACACCA.......................................................................................................................................................................................... 19 3 16 0.13 2 0 2 0 0 0 0 0 0 0
...........................................................................................................................................................TCGTATCCCACTACCG............................................. 16 2 17 0.12 2 0 0 0 0 0 2 0 0 0
........................................................................................................TTATTGAATCTTCCCT................................................................................................ 16 0 20 0.10 2 0 0 0 0 2 0 0 0 0
...................................................................................................................................................................CAGTACCGGGGACAGTACA.................................. 19 3 13 0.08 1 0 0 0 0 1 0 0 0 0
...............................................................................................................................................................ATCCCGGTACCGTCGT......................................... 16 2 17 0.06 1 0 0 0 0 0 1 0 0 0
.....................................................................................................................................................................GTACCGACGACAGAA.................................... 15 1 19 0.05 1 0 0 0 0 0 0 0 1 0
................................................................................................................................................................TTCCAGTACCGTCGGCA....................................... 17 2 20 0.05 1 0 0 0 0 0 0 0 0 1
........................................................................................................TTATTGAATCTTCCC................................................................................................. 15 0 20 0.05 1 0 0 0 0 1 0 0 0 0
.................................CCATCAACGTCTGTCCGGT.................................................................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0 0 0 0 0
.................................................................................AGTTTTTTTCCTTGTTTTCGTT................................................................................................................. 22 3 20 0.05 1 0 0 0 0 1 0 0 0 0

Anti-sense strand reads

AACATCACTGAAGCCTAGTGAGCGTGTGGTACAGGTAATTGCCGATAGGCCATCCTTTGAATAATCATGTAGTTCATTAGTTAAAAAAAAGGAACAAAACGAAAAATAACTTAGAAGGGAAAAGTTGTATTAAGAATATATAAATATAAAGATAGAGGATAGGGTCATGGCAGCTGTCTTGTAGGAAAGGGAACGAGGGTTAGACCGACTACTACT
**************************************************((((((........((((...((((.((..........)).))))...)))).....(((((.........))))).........((((....))))........)))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total SRR553488
RT_0-2 hours eggs
 SRR618934
dsim w501 ovaries
 O001
Testis
 SRR553486
Makindu_3 day-old ovaries
 GSM343915
embryo
 SRR553487
NRT_0-2 hours eggs
...................................................................................................................................................................................................AGGGTTACACCGACTA..... 16 1 4 1.50 6 5 0 0 1 0 0
................................................................................................................................................................................TCTTGTAGGAAAGGGAAC...................... 18 0 1 1.00 1 0 0 1 0 0 0
........................................................................................................................................................TAGAGCATAGGGTGATGGCC............................................ 20 3 1 1.00 1 0 1 0 0 0 0
...................................................................................................................................................................................................AGGGTTACACCGACT...... 15 1 10 0.50 5 5 0 0 0 0 0
...................................................................................................................AGGGATAGGATGTATTAAGA................................................................................. 20 3 5 0.20 1 0 0 0 0 1 0
...........................................................................................................................................................AGAAGAGGGTCATGGCAGTT......................................... 20 3 6 0.17 1 0 0 0 0 0 1
..........................................CGATAGGCCCGCCTTTG............................................................................................................................................................. 17 2 13 0.15 2 0 2 0 0 0 0
.........................................................................................................................................................AGAGCATAGGGTGATGGCT............................................ 19 3 8 0.13 1 0 1 0 0 0 0
......................................................................................AAGAGGAACAAAACGAATAA.............................................................................................................. 20 2 9 0.11 1 0 0 0 1 0 0
..................................................................................................................................TAAGAATATATGAATATA.................................................................... 18 1 9 0.11 1 0 0 1 0 0 0
..................................................................................................................................................................................................CAGGGTTATACCGACTA..... 17 2 15 0.07 1 1 0 0 0 0 0
......................................................................AGGTCATTAGTCGAAAAAAA.............................................................................................................................. 20 3 16 0.06 1 0 0 0 1 0 0
...........................................................................................................................................................AGCATAGGGTGATGGC............................................. 16 2 17 0.06 1 0 1 0 0 0 0
..........................................................................................................................GGGTGTATTAAGAATAT............................................................................. 17 2 20 0.05 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droSim2 3l:5499058-5499273 - dsi_4133 TTGTAGTGACTTCGGATCACTCGCACACCATGTCCATTAACGGCTATCCGGTAGGAAACTT-----------------------------------------ATTAGTACA-TCAAGTAAT--------------------------------------------------------------C------------------------------------------------------------------------------------A-----------------------------------------------------------------------ATTTTTT--TTCCTTGTTTTGCTTTTTATTGAATCTTCCCTTTTCAACATAATTCT-T------A---TAT-----ATTTAT---------------ATTTCTAT-------CT----C----CTATCCCAGTACCGTCGACAGAACATCCTTTCCCTTGCTCCCAATCTGGCTGATGATGA
droSec2 scaffold_2:5522608-5522815 - TTGTGGTGACTTCGGATCACTCGCACACCATGTCCATCAACGGCTATCCGGTAGGGAACTT-----------------------------------------ATTAGTACT-TCAAGAAAT--------------------------------------------------------------C------------------------------------------------------------------------------------A-----------------------------------------------------------------------ACATTCTTTTTTCATGTTTT----------GAATCTTCCCTTTTCAACATAATTCT-T------A---TAT-----ATTTAT---------------ATTTCTAT-------AT----C----CTATCCCAGTACCGTCGACAGAACATCCTTTCCCTTGCTCCCAATCTGGCTGATGATGA
dm3 chr3L:5586248-5586416 - TTGTGGTGACATCGGATCACTCGCACACCATGTCTATCAACGGCTATCCGGTAAGAAACTT-----------------------------------------ATTAGTACT-TCAAGAAAT--------------------------------------------------------------C------------------------------------------------------------------------------------A-----------------------------------------------------------------------ACATTTT-------------------T-------------------------------------A---TAT-----ATTTAT---------------ATTTCCAT-------CT----T----CTATCCCAGTACCGTCGACAGAACATCCTTTCCCTTGCTCCCAATCTGGCTGATGATGA
droEre2 scaffold_4784:8272948-8273117 - TTGTGGTGACTTCGGATCACTCGCACACCATGTCTATCAACGGCTATCCGGTAAGAAAGTA-----------------------------------------ACTCAAATT-TCAAGAAAC--------------------------------------------------------------C------------------------------------------------------------------------------------AAAATAACTCGT----------------------------------------------------------------------------------------------------------------------------A---AA------CTATGT---------------GCTTCTAT-------C-----T----CCTATTCAGTACCGCCGACAGAACATCCTTTCACTAGCCCCCAATCTGGGCAATGATGA
droYak3 3L:6151168-6151342 - TTGTGGTGACTTCGGATCACTCGCACACCATGTCCATTAACGGCTATCCGGTAAGGAACTA-----------------------------------------TCTAAAGTT-TGAAGAAAC--------------------------------------------------------------C------------------------------------------------------------------------------------AAAATAAA---------------------------------------------------------------------------------------------------------------------TCT--------A---TATATTATATATGT---------------ATTTCTCT-------A-----T----CCAATTAAGTACCGCCGACAGAACATCCTTTCGCTAGCTCCCAATCTGGCCGATGATGA
droEug1 scf7180000409466:3351794-3352022 - TTGTCGTGACCTCGGATCACTCGCACACCATGTCTATTAATGGCTATCCGGTGAGTAATTTAAATAGAAAAATTTAAATAATATTAAATTAAAGGAATATTAATTAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------TA------------------TACACATCAAAATAAACTATTTCTCACTAATAA---------------------CTATTCT-------------------AAAA-TAT------------------------TTTTTT-----------------------------------------T---ACTAT----T----ATTATTTAGTACCGTCGTCAGAACATCCTGTCCCTGGCTCCCAACCTCGCTGATGACGA
droBia1 scf7180000301506:1269656-1269897 - TCGTGGTGACCGCCGATCATGCGCATGTTATGTCCATCAATGGTTATCCTGTGAGTATTTCGGG-----------------------------------------TTTGC------GAGGT--------------------------------------------------------------T------------------------------------------------------------------------------------GAAGTAAATAAGATATGATGCGCATTTGGATGAAAT--------TTAGTAACCATTCCATCTGGATGTCC---------------------------------AATCCCCTTAATTTATGAAAATTTGGT------A---AAG-----GGCTAG--------------TTAACCTCT-------TT----C----TTCCCGCAGTTCCGCGACCAGGAGATCTTTGGGTTGGCCC--A-ACTGGCGGACGACAA
droTak1 scf7180000415868:265623-265875 - TTGTGGTGACTTCGGATCACTCGCACACCATGTCCATTAACGGCTATCCGGTGAGTAATTAAAA-----------------------------------------GTTATT------C------------------------------ATTTTGTATAATAAAAACTTTAAATTTCAAGAGATT------ATCTAGTAAAACAAAAAAAAAATTTTTTTAATACCAAATTTTAATACTACATTTTTAAAATGTTTTAATAACAA-------------------------------------------------------------------------------------------GTTTT----------GTA----------------------------------------------------------------------TG-------TT----T----TTTATATAGTACCGCCGTCAGAACATCCTTTCCCTGGCTCCCAATGTGGCTGATGATGA
droEle1 scf7180000491080:709077-709233 - TGGTGGTCACCGCTGACCACTCGCATGTGTTCACCTACGCAGGGTACTCGGTAAGTAGACTA-----------------------------------------TGTTTGTAG-TA----TC--------------------------------------------------------------C------------------------------------------------------------------------------------AAGTA-------------------------------------------------------------------ATACCAT---------------------------------------------------------T---A-------------------------------ATTGT-------CT----T----GTTGTTTAGTACCGCGGCTCGGATATTTTTGGCAAGGCCCCTGTCAACGGACACGACGG
droRho1 scf7180000777217:338001-338165 + TCGTGGTTACCGCCGATCATTCTCATGTGATGTCCATCAATGGTTATCCTGTAAGTATTTCGGG-----------------------------------------GACTTT---------------------------------------------------------------------------------C---------------------------------------------------------CATTTTACTAGTGAGGTT--TATGACTCGG-------------------------------------------------------------------------------------------AA-------------------------------------------------------------------TCTCT-------TT----T----ATCTGCTAGTTCCGTGACCAGGAGATCACTGGATTGGCCC---AGCTGGCCGATGACAA
droFic1 scf7180000453841:143634-143856 + TTGTGGTTACCTCGGATCACTCGCACACCATGTCCATCAATGGCTACCCAGTGAGTAATGGAAA--------------------------------------TAATCTTAAGTTACTCAATAAAATTTCGAAATAATTAACAAAATCCATTCTGCAAAAT-------------TT-----------------C---------------------------------------------------------TGT----AAAACAAACTT--TATAATTTTG-------------------------------------------------------------------------------------------TA------------------------------------------------A--------------TTTTTTTAA-------CT----T----TCCTTTTAGTACCGTCGTCAAAACATTTTGTCCCTCGCTCCCAATTTGGCTGAGGATGA
droKik1 scf7180000302266:255109-255298 - TTGTGGTGACCTCGGATCACTCGCACACCATGTCCATCAATGGCTATCCGGTGAGTAAATTAAG-----------------------------------------CTTTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCAG-----------------------------CT----------------------ATTT-AT-------------------------------AAATTGTAATATATATGTAAAAATTTCTAATA-ATTTCTCTT---AAATTGAT-------ATTTCCAGTACCGCCGCCAGAATATCCTGTCGCTGGCTCCCAACCTGGCAGACGACGA
droAna3 scaffold_13337:12963843-12964003 + TCGTGGTGACCTCAGATCACTCGCACACCATGTCCATCAATGGTTATCCGGTAAGACGTTCAAC-----------------------------------------T--GAAA-TA----TC--------------------------------------------------------------TTTGTAC-TC---------------------------------------------------------CATTTAAC---------------------------------------------------------GAA-------------------------------------------------------------------------------------------------------------------------ACCTGG-------TC----T----TCTCTTTAGTACCGTCGTCAGAACATCCTGTCCTTGGCTCCCAACTTGGCGGATGACGA
droBip1 scf7180000396589:1068319-1068475 - TCGTGGTGACCTCGGATCACTCGCACACTATGTCCATTAATGGTTATCCGGTGAGTTTTTAAAC-----------------------------------------TAAA----------TT--------------------------------------------------------------TTTGTAA-TT---------------------------------------------------------CATTTCAC---------------------------------------------------------TAA-------------------------------------------------------------------------------------------------------------------------ACCTAT-------T-----C----CCTTTTCAGTACCGCCGCCAGAACATCCTCTCCCTGGCTCCCAACTTGGCGGATGACGA
dp5 XR_group6:8052816-8052987 + TTGTGGTCACATCGGATCACTCGCACACCATGTCCATAAATGGTTATCCTGTAAGCTGAGA-----------------------------------------GTTGCTTCAGTCAGGCGAT--------------------------------------------------------------C------------------------------------------------------------------------------------A-----------------------------------------------------------------------ATCTTCT-------------------AACC-GGT------------------------CCTTCC-----------------------------------------T---TCTCTTCTTT----CACCTGTAGAGCCGCCGCCAGAACATCTTTTCATTGGCCCCCAATCAGGCGGACGACGA
droPer2 scaffold_27:404130-404301 - TTGTGGTCACATCGGATCACTCGCACACCATGTCCATAAATGGTTATCCTGTAAGCTGAGA-----------------------------------------GTTGCTTCAGTCAGGCGAT--------------------------------------------------------------C------------------------------------------------------------------------------------A-----------------------------------------------------------------------ATCTTCT-------------------AATC-GGT------------------------CCTTCC-----------------------------------------T---TCCCTTATTT----CTCCTGTAGAGCCGCCGCCAGAACATCTTTTCATTGGCCCCCAATCAGGCGGACGACGA
droWil2 scf2_1100000004511:3802840-3803017 - TAGTAGTGACCTCAGATCATTCGCATACCATGTCCATTAATGGTTATCCGGTAAGAACAAAA-----------------------------------------------------AGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACCTTTACCTCTCTTTTTCTCATTCTCTC-------------------TCTC-TCT------------------------CTCTCT-----------------------------------------C---TCTCTGTCTT----CTTTTGCAGTATCGTCGTCAAAATATCTATGAAACAGCTCCAAATCTAGCTGATGATGA
droVir3 scaffold_13049:11523504-11523666 - dvi_19528 TTGTTGTCACCTCGGATCACTCGCACACCATGACTATCAATGGCTATCCTGTAGGTGTCTT-----------------------------------------CTTATGCTC------T------------------------------------------------------------------------------------------------------------------------------------CGC----------------------------------------------------------------------------------------TTT----------------------TTTG-AGT------------------------TCCCTT-----------------------------------------CTAA-T---GTTCCGAATACTTTGCAGTATCGTCGTCAGAATATACTTTCACTGGCTCCCAATCAGGCCGAAGATGA
droMoj3 scaffold_6680:9301933-9302096 + TCGTTGTCACCTCCGACCACTCGCACACAATGACCATCAACGGTTATCCGGTGGGTGACCCAGA-----------------------------------------CTCATT------C------------------------------------------------------------------------------------------------------------------------------------CAT----------------------------------------------------------------------------------------TCC----------------------ATTC-CGT------------------------TCTCTT-----------------------------------------TTAATT---GCTCTCATATCATTGCAGTATCGTCGCCAAAACATCCTCTCGCTGGCTCCCAATTTGGCGGACGATGA
droGri2 scaffold_15110:7833287-7833446 + TCGTTGTCACCTCGGATCATTCCCATACAATGACCATCAACGGATATCCGGTAAGTTGCCT-----------------------------------------ATTAATGCAG-CT-----T--------------------------------------------------------------T------------------------------------------------------------------------------------A-----------------------------------------------------------------------ATTTTAT-------------------ACTC-AAT------------------------CG--------------------------------------------------CTATTCTTT----TCTGTGCAGTATCGTCGCCAAGATATCCTCTCACTGGCTCCGAATTTGGCCACCGATGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droSim2
TTGTAGTGACTTCGGATCACTCGCACACCATGTCCATTAACGGCTATCCGGTAGGAAACTT-----------------------------------------ATTAGTACA-TCAAGTAAT--------------------------------------------------------------C------------------------------------------------------------------------------------A-----------------------------------------------------------------------ATTTTTT--TTCCTTGTTTTGCTTTTTATTGAATCTTCCCTTTTCAACATAATTCT-T------A---TAT-----ATTTAT---------------ATTTCTAT-------CT----C----CTATCCCAGTACCGTCGACAGAACATCCTTTCCCTTGCTCCCAATCTGGCTGATGATGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......GACTTCGGATCACTCGCACACCATGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2719.00907110000000000000
.......GACTTCGGATCACTCGCACACCATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2617.00702140000000000000
.......GACTTCGGATCACTCGCACACCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2414.00401021000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAGAACATCCTTTCCCTTG......................2213.00302010000000000000
.........CTTCGGATCACTCGCACACCATGTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00300120000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACATCCTTTCCCTTGCTCCT.................2312.00200200000000000000
.....GTGACTTCGGATCACTCGCACACCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200020000000000000
........ACTTCGGATCACTCGCACACCATGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00202000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAGAACATCCTTTCCCTTGCTCCC.................2712.00201010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAGAACATCCTTTCCCT........................2012.00201010000000000000
.......GACTTCGGATCACTCGCACACCATGTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00201010000000000000
.........CTTCGGATCACTCGCACACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200200000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAGAACATCCTTTCCCTT.......................2112.00200020000000000000
.......GACTTCGGATCACTCGCACAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCGTCGACAGAACATCCTTTCC..........................2411.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCCAATCTGGCTGATGATG.2111.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAGAACATCCTTTCCCTTGCTCC..................2611.00100010000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGAACATCCTTTCCCTT.......................2011.00100010000000000000
TTGTAGTGACTTCGGATCACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000000000
.......GACTTCGGATCACTCGCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
.......GACTTCGGATCACTCGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTTGCTCCCAATCTGGCTGAT.....2311.00100010000000000000
.........CTTCGGATCACTCGCACACCATGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TTATTGAATCTTCCCT.............................................................................................................................................16200.10200000000200000000
.............................................................................................................................................................................................................................................................................................................................................................................TTATTGAATCTTCCC..............................................................................................................................................15200.05100000000100000000
droSec2
TTGTGGTGACTTCGGATCACTCGCACACCATGTCCATCAACGGCTATCCGGTAGGGAACTT-----------------------------------------ATTAGTACT-TCAAGAAAT--------------------------------------------------------------C------------------------------------------------------------------------------------A-----------------------------------------------------------------------ACATTCTTTTTTCATGTTTT----------GAATCTTCCCTTTTCAACATAATTCT-T------A---TAT-----ATTTAT---------------ATTTCTAT-------AT----C----CTATCCCAGTACCGTCGACAGAACATCCTTTCCCTTGCTCCCAATCTGGCTGATGATGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......GACTTCGGATCACTCGCACACCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0032100
.......GACTTCGGATCACTCGCACACCATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020110
...............................GTCCATCAACGGCTATCCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
..............GATCACTCGCACACCATGTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGAACATCCTTTCCCTTGCTCCC.................2611.0011000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAATCTGGCTGATGAT..1811.0010010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCCTTGCTCCCAATCTGGCTGA......2411.0010100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAGAACATCCTTTCCCTTGCTC...................2511.0010010
.........CTTCGGATCACTCGCACACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGAACATCCTTTCCCTT.......................2011.0011000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCAATCTGGCTGATGATGA2111.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCGTCGACAGAACATCCTTTCCCT........................2711.0010100
.........CTTCGGATCACTCGCACACCATGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
.......GACTTCGGATCACTCGCACACCATGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000
.......GACTTCGGATCACTCGCACACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTCCCAATCTGGCTGATGCGC.2411.0010100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTGCTCCCAATCTGGCT........1911.0010010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCTTTCCCTTGCTCCCAATCTGGCT........2811.0010010
..............................TGTCCATCAACGGCTATCCGTAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
dm3
TTGTGGTGACATCGGATCACTCGCACACCATGTCTATCAACGGCTATCCGGTAAGAAACTT-----------------------------------------ATTAGTACT-TCAAGAAAT--------------------------------------------------------------C------------------------------------------------------------------------------------A-----------------------------------------------------------------------ACATTTT-------------------T-------------------------------------A---TAT-----ATTTAT---------------ATTTCCAT-------CT----T----CTATCCCAGTACCGTCGACAGAACATCCTTTCCCTTGCTCCCAATCTGGCTGATGATGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAGAACATCCTTTCCCTTGC.....................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTCCCTTGCTCCCAATCTGGC.........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GACATCGGATCACTCGCACACCATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GACATCGGATCACTCGCACAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCCTTGCTCCCAATCT............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAGTACCGTCGACAGAAC...................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GTCTATCAACGGCTATCCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..............GATCACTCGCACACCATGTCTATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCCAATCTGGCTGATGATG.2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................CACTCGCACACCATGTCTATCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTGCTCCCAATCTGGCT........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGAACATCCTTTCCCTTGCTCCC.................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAGAACATCCTTTCCCTTGCTCC..................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGACAGAACATCCTTTCCCTTGCT....................2611.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........TCGGATCACTCGCACACCATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEre2
TTGTGGTGACTTCGGATCACTCGCACACCATGTCTATCAACGGCTATCCGGTAAGAAAGTA-----------------------------------------ACTCAAATT-TCAAGAAAC--------------------------------------------------------------C------------------------------------------------------------------------------------AAAATAACTCGT----------------------------------------------------------------------------------------------------------------------------A---AA------CTATGT---------------GCTTCTAT-------C-----T----CCTATTCAGTACCGCCGACAGAACATCCTTTCACTAGCCCCCAATCTGGGCAATGATGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......GACTTCGGATCACTCGCACACCATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2616.0062400000
........ACTTCGGATCACTCGCACACCATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0022000000
........................ACACCATGTCTATCAACGGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0021010000
.......GACTTCGGATCACTCGCACACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020100100
........................ACACCATGTCTATCAACGGCTATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0021100000
.........CTTCGGATCACTCGCACACCATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
.........................CACCATGTCTATCAACGGCTATCCGTAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010001000
......................GCACACCATGTCTATCAACGGCTATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
.......GACTTCGGATCACTCGCACACCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0011000000
.......GACTTCGGATCACTCGCACACCATGTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
.................CACTCGCACACCATGTCTATCAACGGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-------C-----T----CCTATTCAGTACCGCCGAC........................................2311.0010100000
......TGACTTCGGATCACTCGCACACCATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010001000
.....................CGCACACCATGTCTATCAACGGCTATCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000
...................CTCGCACACCATGTCTATCAACGGCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
......................GCACACCATGTCTATCAACGGCTATCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCCTTTCACTAGCCCCCAATCT............2511.0010100000
..........................ACCATGTCTATCAACGGCTATCCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000010
.....GTGACTTCGGATCACTCGCACACCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
..........TTCGGATCACTCGCACACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000
.......GACTTCGGATCACTCGCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
.................CACTCGCACACCATGTCTATCAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACTAGCCCCCAATCTG...........1911.0011000000
.......GACTTCGGATCACTCGCACACCATGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACATCCTTTCACTAGCCC...................2111.0010100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCCTTTCACTAGCCCCCAATCTG...........2611.0010100000
.......................CACACCATGTCTATCAACGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
..........TTCGGATCACTCGCACACCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACATCCTTTCACTAGCCCCC.................2311.0011000000
.....................CGCACACCATGTCTATCAACGGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCGCCGACAGAACATCCTTTCACT........................2711.0011000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACATCCTTTCACTAGC.....................1911.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACAGAACATCCTTTCACTAGC.....................2311.0010001000
........................ACACCATGTCTATCAACGGCTATCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTTTCACTAGCCCCCAATCTGGGC........2711.0010100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTTTCACTAGCCCCCAATCT............2311.0011000000
.....................CGCACACCATGTCTATCAACGGCTATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCGCCGACAGAACATCCTTT............................2311.0011000000
........................ACACCATGTCTATCAACGGCTATCCGTAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTAGCCCCCAATCTGGGC........2011.0011000000
........ACTTCGGATCACTCGCACACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.......GACTTCGGATCACTCGCACAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
droYak3
TTGTGGTGACTTCGGATCACTCGCACACCATGTCCATTAACGGCTATCCGGTAAGGAACTA-----------------------------------------TCTAAAGTT-TGAAGAAAC--------------------------------------------------------------C------------------------------------------------------------------------------------AAAATAAA---------------------------------------------------------------------------------------------------------------------TCT--------A---TATATTATATATGT---------------ATTTCTCT-------A-----T----CCAATTAAGTACCGCCGACAGAACATCCTTTCGCTAGCTCCCAATCTGGCCGATGATGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......GACTTCGGATCACTCGCACACCATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2618.00805000030000
.......GACTTCGGATCACTCGCACACCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2416.00603100020000
.......GACTTCGGATCACTCGCACACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2215.00501300010000
.......GACTTCGGATCACTCGCACACCATGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00202000000000
.......GACTTCGGATCACTCGCACACCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.00201000010000
.............GGATCACTCGCACACCATGTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTTTCGCTAGCTCCCAATCT............2311.00101000000000
.........CTTCGGATCACTCGCACACCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCCAATCTGGCCGATG....1911.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACATCCTTTCGCTAGC.....................1811.00100100000000
.................CACTCGCACACCATGTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
.................CACTCGCACACCATGTCCATTAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
................................................................................................................TGAAGAAAC--------------------------------------------------------------C------------------------------------------------------------------------------------AAAATAAA---------------------------------------------------------------------------------------------------------------------TC...............................................................................................................................2011.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCTTTCGCTAGCTCCCAATCT............2411.00101000000000
........ACTTCGGATCACTCGCACACCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
...............................GTCCATTAACGGCTATCCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
........ACTTCGGATCACTCGCACACCATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
.........CTTCGGATCACTCGCACACCATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGCTCCCAATCTGGCCGATGAT..2411.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCCAATCTGGCCGATGATG.2111.00101000000000
.......GACTTCGGATCACTCGCACAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
..................ACTCGCACACCATGTCCATTAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.......GACTTCGGATCACTCGCACACCATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
.....GTGACTTCGGATCACTCGCACACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
..............GATCACTCGCACACCATGTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAACATCCTTTCGCTAGCTCCCA................2511.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCTTTCGCTAGCTCCCA................2011.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGCTCCCAATCTGGCCGAT.....2111.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAGAACATCCTTTCGCTAGCTCCC.................2611.00101000000000
.......GACTTCGGATCACTCGCACACCATGTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
...............ATCACTCGCACACCATGTCCATTA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.............................ATGTCCATTAACGGCTATCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
droEug1
TTGTCGTGACCTCGGATCACTCGCACACCATGTCTATTAATGGCTATCCGGTGAGTAATTTAAATAGAAAAATTTAAATAATATTAAATTAAAGGAATATTAATTAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------TA------------------TACACATCAAAATAAACTATTTCTCACTAATAA---------------------CTATTCT-------------------AAAA-TAT------------------------TTTTTT-----------------------------------------T---ACTAT----T----ATTATTTAGTACCGTCGTCAGAACATCCTGTCCCTGGCTCCCAACCTCGCTGATGACGASizeHit CountTotal NormTotal
No Reads
droBia1
TCGTGGTGACCGCCGATCATGCGCATGTTATGTCCATCAATGGTTATCCTGTGAGTATTTCGGG-----------------------------------------TTTGC------GAGGT--------------------------------------------------------------T------------------------------------------------------------------------------------GAAGTAAATAAGATATGATGCGCATTTGGATGAAAT--------TTAGTAACCATTCCATCTGGATGTCC---------------------------------AATCCCCTTAATTTATGAAAATTTGGT------A---AAG-----GGCTAG--------------TTAACCTCT-------TT----C----TTCCCGCAGTTCCGCGACCAGGAGATCTTTGGGTTGGCCC--A-ACTGGCGGACGACAASizeHit CountTotal NormTotal
No Reads
droTak1
TTGTGGTGACTTCGGATCACTCGCACACCATGTCCATTAACGGCTATCCGGTGAGTAATTAAAA-----------------------------------------GTTATT------C------------------------------ATTTTGTATAATAAAAACTTTAAATTTCAAGAGATT------ATCTAGTAAAACAAAAAAAAAATTTTTTTAATACCAAATTTTAATACTACATTTTTAAAATGTTTTAATAACAA-------------------------------------------------------------------------------------------GTTTT----------GTA----------------------------------------------------------------------TG-------TT----T----TTTATATAGTACCGCCGTCAGAACATCCTTTCCCTGGCTCCCAATGTGGCTGATGATGASizeHit CountTotal NormTotal
No Reads
droEle1
TGGTGGTCACCGCTGACCACTCGCATGTGTTCACCTACGCAGGGTACTCGGTAAGTAGACTA-----------------------------------------TGTTTGTAG-TA----TC--------------------------------------------------------------C------------------------------------------------------------------------------------AAGTA-------------------------------------------------------------------ATACCAT---------------------------------------------------------T---A-------------------------------ATTGT-------CT----T----GTTGTTTAGTACCGCGGCTCGGATATTTTTGGCAAGGCCCCTGTCAACGGACACGACGGSizeHit CountTotal NormTotal
No Reads
droRho1
TCGTGGTTACCGCCGATCATTCTCATGTGATGTCCATCAATGGTTATCCTGTAAGTATTTCGGG-----------------------------------------GACTTT---------------------------------------------------------------------------------C---------------------------------------------------------CATTTTACTAGTGAGGTT--TATGACTCGG-------------------------------------------------------------------------------------------AA-------------------------------------------------------------------TCTCT-------TT----T----ATCTGCTAGTTCCGTGACCAGGAGATCACTGGATTGGCCC---AGCTGGCCGATGACAASizeHit CountTotal NormTotal
No Reads
droFic1
TTGTGGTTACCTCGGATCACTCGCACACCATGTCCATCAATGGCTACCCAGTGAGTAATGGAAA--------------------------------------TAATCTTAAGTTACTCAATAAAATTTCGAAATAATTAACAAAATCCATTCTGCAAAAT-------------TT-----------------C---------------------------------------------------------TGT----AAAACAAACTT--TATAATTTTG-------------------------------------------------------------------------------------------TA------------------------------------------------A--------------TTTTTTTAA-------CT----T----TCCTTTTAGTACCGTCGTCAAAACATTTTGTCCCTCGCTCCCAATTTGGCTGAGGATGASizeHit CountTotal NormTotal
No Reads
droKik1
TTGTGGTGACCTCGGATCACTCGCACACCATGTCCATCAATGGCTATCCGGTGAGTAAATTAAG-----------------------------------------CTTTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCAG-----------------------------CT----------------------ATTT-AT-------------------------------AAATTGTAATATATATGTAAAAATTTCTAATA-ATTTCTCTT---AAATTGAT-------ATTTCCAGTACCGCCGCCAGAATATCCTGTCGCTGGCTCCCAACCTGGCAGACGACGASizeHit CountTotal NormTotal
No Reads
droAna3
TCGTGGTGACCTCAGATCACTCGCACACCATGTCCATCAATGGTTATCCGGTAAGACGTTCAAC-----------------------------------------T--GAAA-TA----TC--------------------------------------------------------------TTTGTAC-TC---------------------------------------------------------CATTTAAC---------------------------------------------------------GAA-------------------------------------------------------------------------------------------------------------------------ACCTGG-------TC----T----TCTCTTTAGTACCGTCGTCAGAACATCCTGTCCTTGGCTCCCAACTTGGCGGATGACGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAACATCCTGTCCTTGGCTCCC.................2413.003120000
.......GACCTCAGATCACTCGCACACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.003030000
.....................CGCACACCATGTCCATCAATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002100001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGTCCTTGGCTCCCAACTT............2112.002110000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGTCCTTGGCTCCCAACTTGGC.........2612.002110000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCGTCGTCAGAACATCCT..............................2112.002000020
.......GACCTCAGATCACTCGCACACCAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002020000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAACATCCTGTCCTTGGCTCCCAA...............2612.002110000
.......GACCTCAGATCACTCGCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002110000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACATCCTGTCCTTGGCTCCC.................2212.002110000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCTGTCCTTGGCTCCCAACTT............2411.001100000
.....................CGCACACCATGTCCATCAATGGTTATCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
......................GCACACCATGTCCATCAATGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACATCCTGTCCTTGGCTCC..................2111.001100000
.................CACTCGCACACCATGTCCATCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAACATCCTGTCCTTGGCTCC..................2311.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCTGTCCTTGGCTCCCAACTTGGCG........2811.001010000
.....................CGCACACCATGTCCATCAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGCTCCCAACTTGGCGGATGACGA2711.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGTCAGAACATCCTGTCCTTG.......................2311.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCTGTCCTTGGCTCCCAACTTGGC.........2711.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGCTCCCAACTTGGCG........1911.001010000
................TCACTCGCACACCATGTCCATCAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTTGGCGGATGACGA1811.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGGCTCCCAACTTGGCGG.......2011.001100000
..............GATCACTCGCACACCATGTCCATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGTCCTTGGCTCCCAACTTGGCG........2711.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACATCCTGTCCTTGGCT....................1911.001001000
...............ATCACTCGCACACCATGTCCATCAATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCTGTCCTTGGCTCCC.................1911.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCCTGTCCTTGGCTCCCA................2111.001001000
.......GACCTCAGATCACTCGCACACCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCTCCCAACTTGGCGGATG....2111.001010000
.......GACCTCAGATCACTCGCACACCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACCGTCGTCAGAACATCCTGTC...........................2411.001000010
droBip1
TCGTGGTGACCTCGGATCACTCGCACACTATGTCCATTAATGGTTATCCGGTGAGTTTTTAAAC-----------------------------------------TAAA----------TT--------------------------------------------------------------TTTGTAA-TT---------------------------------------------------------CATTTCAC---------------------------------------------------------TAA-------------------------------------------------------------------------------------------------------------------------ACCTAT-------T-----C----CCTTTTCAGTACCGCCGCCAGAACATCCTCTCCCTGGCTCCCAACTTGGCGGATGACGASizeHit CountTotal NormTotal
No Reads
dp5
TTGTGGTCACATCGGATCACTCGCACACCATGTCCATAAATGGTTATCCTGTAAGCTGAGA-----------------------------------------GTTGCTTCAGTCAGGCGAT--------------------------------------------------------------C------------------------------------------------------------------------------------A-----------------------------------------------------------------------ATCTTCT-------------------AACC-GGT------------------------CCTTCC-----------------------------------------T---TCTCTTCTTT----CACCTGTAGAGCCGCCGCCAGAACATCTTTTCATTGGCCCCCAATCAGGCGGACGACGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......CACATCGGATCACTCGCACACCATGTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.0020100001000
.............GGATCACTCGCACACCATGTCCATAAATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000000
..................ACTCGCACACCATGTCCATAAATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT----CACCTGTAGAGCCGCCGCC........................................2111.0010100000000
......................................................................................................................GAT--------------------------------------------------------------C------------------------------------------------------------------------------------A-----------------------------------------------------------------------ATCTTCT-------------------AACC-GGT------------------------............................................................................................................................1911.0010100000000
...............ATCACTCGCACACCATGTCCATAAATGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCCCCAATCAGGCGGA......1811.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCCCCAATCAGGCGGA......1911.0010100000000
..............GATCACTCGCACACCATGTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.......CACATCGGATCACTCGCACACCATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010100000000
.......CACATCGGATCACTCGCACACCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.5010100000000
.....GTCACATCGGATCACTCGCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.5010100000000
....GGTCACATCGGATCACTCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010100000000
........ACATCGGATCACTCGCACACCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.5010000100000
.....GTCACATCGGATCACTCGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010100000000
.....GTCACATCGGATCACTCGCACACCATGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2920.5010100000000
....GGTCACATCGGATCACTCGCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.5010100000000
droPer2
TTGTGGTCACATCGGATCACTCGCACACCATGTCCATAAATGGTTATCCTGTAAGCTGAGA-----------------------------------------GTTGCTTCAGTCAGGCGAT--------------------------------------------------------------C------------------------------------------------------------------------------------A-----------------------------------------------------------------------ATCTTCT-------------------AATC-GGT------------------------CCTTCC-----------------------------------------T---TCCCTTATTT----CTCCTGTAGAGCCGCCGCCAGAACATCTTTTCATTGGCCCCCAATCAGGCGGACGACGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......CACATCGGATCACTCGCACACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2226.50131300000
..........ATCGGATCACTCGCACACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1924.509900000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCCAGAACATCTTTTCATT........................2213.003300000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAACATCTTTTCATTGGCCCCCA................2513.003300000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGAACATCTTTTCATTGGCCCCC.................2513.003300000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACATCTTTTCATTGGCCCCC.................2213.003300000
........ACATCGGATCACTCGCACACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2122.505500000
.....GTCACATCGGATCACTCGCACACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2422.004400000
.........CATCGGATCACTCGCACACCATGTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002200000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAGAACATCTTTTCATTGGCCCC..................2512.002200000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGAACATCTTTTCATT........................1812.002200000
.......CACATCGGATCACTCGCACACCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2422.004400000
.......CACATCGGATCACTCGCACACCATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2521.503300000
........ACATCGGATCACTCGCACACCATGTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGGCCCCCAATCAGGCGGACGA...2511.001100000
.....GTCACATCGGATCACTCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1921.002200000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCAGAACATCTTTTCATT........................2011.001100000
......TCACATCGGATCACTCGCACACCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2521.002200000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGGCCCCCAATCAGGCGGAC.....2311.001100000
.......CACATCGGATCACTCGCACACCATGTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCCCCAATCAGGCGGAC.....1911.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCGCCAGAACATCTTTTCATTGGCC....................2711.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAACATCTTTTCATTGGCCCC..................2311.001100000
.......CACATCGGATCACTCGCACACCATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.501100000
.........CATCGGATCACTCGCACACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.501100000
....GGTCACATCGGATCACTCGCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.501010000
..........ATCGGATCACTCGCACACCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501010000
.....GTCACATCGGATCACTCGCACACCATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.501010000
.......CACATCGGATCACTCGCACACCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.501100000
.....GTCACATCGGATCACTCGCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501100000
.......CACATCGGATCACTCGCAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.501100000
.......CACATCGGATCACTCGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.501001000
droWil2
TAGTAGTGACCTCAGATCATTCGCATACCATGTCCATTAATGGTTATCCGGTAAGAACAAAA-----------------------------------------------------AGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACCTTTACCTCTCTTTTTCTCATTCTCTC-------------------TCTC-TCT------------------------CTCTCT-----------------------------------------C---TCTCTGTCTT----CTTTTGCAGTATCGTCGTCAAAATATCTATGAAACAGCTCCAAATCTAGCTGATGATGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................GTCCATTAATGGTTATCCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.00301200
.......GACCTCAGATCATTCGCATACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.00200020
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATCTATGAAACAGCTCCAAAT..............2412.00200020
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCTATGAAACAGCTCCA.................2012.00201010
..........CTCAGATCATTCGCATACCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.00200020
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTCCAAATCTAGCTGAT.....1911.00101000
.............................ATGTCCATTAATGGTTATCCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAAATATCTATGAAACAGCTCC..................2511.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGAAACAGCTCCAAAT..............1911.00100010
.......GACCTCAGATCATTCGCAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...................................ATTAATGGTTATCCGGTAAGAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCTATGAAACAGCTCC..................1911.00100010
............................CATGTCCATTAATGGTTATCCGTAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCGTCGTCAAAATATCT...............................1811.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGAAACAGCTCCAAATCTAGCT........2411.00100010
..........CTCAGATCATTCGCATACCATGTCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTATGAAACAGCTCCAAAT..............2111.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCTATGAAACAGCTCCAAAT..............2211.00101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCGTCGTCAAAATATCT...............................2011.00100100
.................CATTCGCATACCATGTCCATTAATGGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010
.................CATTCGCATACCATGTCCATTAATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
...............................GTCCATTAATGGTTATCCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATATCTATGAAACAGCTCC..................2311.00100100
..............GATCATTCGCATACCATGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
............CAGATCATTCGCATACCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT----CTTTTGCAGTATCGTCGTC........................................2111.00100100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATATCTATGAAACAGCT....................2111.00100010
.....................CGCATACCATGTCCATTAAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
............CAGATCATTCGCATACCATGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.........CCTCAGATCATTCGCATACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
..................ATTCGCATACCATGTCCATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCTATGAAACAGCTCCAAAT..............2311.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATCGTCGTCAAAATATCTATGAAACA.......................2811.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATATCTATGAAACAGCTCCAAAT..............2611.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCAAAATATCTATGAAACAGCTCCAA................2811.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATCTATGAAACAGCTCC..................2011.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAATATCTATGAAACAG......................1911.00101000
...............................GTCCATTAATGGTTATCCGTAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2250.20100010
..............................................................................................................................................................................................................................................................................................................................................TTCTCATTCTCTC-------------------TCTC-TCT------------------------CTCTCT-----------------------------------------.............................................................................2660.17101000
droVir3
TTGTTGTCACCTCGGATCACTCGCACACCATGACTATCAATGGCTATCCTGTAGGTGTCTT-----------------------------------------CTTATGCTC------T------------------------------------------------------------------------------------------------------------------------------------CGC----------------------------------------------------------------------------------------TTT----------------------TTTG-AGT------------------------TCCCTT-----------------------------------------CTAA-T---GTTCCGAATACTTTGCAGTATCGTCGTCAGAATATACTTTCACTGGCTCCCAATCAGGCCGAAGATGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATACTTTCACTGGCTCCC.................2012.002000000000000000001000010000000000000000000000000000000000000000
.......CACCTCGGATCACTCGCACACCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002000000000000001100000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATACTTTCACTGGCTCCCA................2111.001000000000000000100000000000000000000000000000000000000000000000
.........................CACCATGACTATCAATGGCTATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
....TGTCACCTCGGATCACTCGCACAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACTGGCTCCCAATCAGGCCGA......2311.001001000000000000000000000000000000000000000000000000000000000000
.............GGATCACTCGCACACCATGACTATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.......CACCTCGGATCACTCGCACACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGTCAGAATATACTTTCAC.........................2111.001000000000000000000000100000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCGTCGTCAGAATATACTT.............................2111.001001000000000000000000000000000000000000000000000000000000000000
.....GTCACCTCGGATCACTCGCACAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000001000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCGTCAGAATATACTTTCC..........................2111.001000000000000000000010000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGCTCCCAATCAGGCCGA......2011.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTTTCACTGGCTCCCA................1911.001000000000000000000000010000000000000000000000000000000000000000
.......CACCTCGGATCACTCGCACAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCCAATCAGGCCGAAGATG.2111.001000000000000000000010000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATACTTTCACTGGCTCCCAATCAG...........2611.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGTCAGAATATACTTT............................1811.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGTCAGAATATACTTTC...........................1911.001000000000000001000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTCCCAATCAGGCCGAAG....2011.001001000000000000000000000000000000000000000000000000000000000000
TTGTTGTCACCTCGGATCACTCGCACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000000000000000000000000000000000000000000000000000000000000
......TCACCTCGGATCACTCGCACACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.......CACCTCGGATCACTCGCACACCATGACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000100000000000000000000000000000000000000000000000
.......CACCTCGGATCACTCGCACACCATGACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
......TCACCTCGGATCACTCGCACAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..GTTGTCACCTCGGATCACTCGCACAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000001000000000000000000000000000000000000000000000000
....TGTCACCTCGGATCACTCGCACACCAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..................ACTCGCACACCATGACTATC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
....TGTCACCTCGGATCACTCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2021.002000000000000000100000000000000000000000100000000000000000000000
.....GTCACCTCGGATCACTCGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.501000000000000000000000100000000000000000000000000000000000000000
.......CACCTCGGATCACTCGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.501100000000000000000000000000000000000000000000000000000000000000
.....GTCACCTCGGATCACTCGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.501001000000000000000000000000000000000000000000000000000000000000
...TTGTCACCTCGGATCACT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.501000000000000000000001000000000000000000000000000000000000000000
..GTTGTCACCTCGGATCACTCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501100000000000000000000000000000000000000000000000000000000000000
.................................CTATCAATGGCTATCCTTAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.131001000000000000000000000000000000000000000000000000000000000000
droMoj3
TCGTTGTCACCTCCGACCACTCGCACACAATGACCATCAACGGTTATCCGGTGGGTGACCCAGA-----------------------------------------CTCATT------C------------------------------------------------------------------------------------------------------------------------------------CAT----------------------------------------------------------------------------------------TCC----------------------ATTC-CGT------------------------TCTCTT-----------------------------------------TTAATT---GCTCTCATATCATTGCAGTATCGTCGCCAAAACATCCTCTCGCTGGCTCCCAATTTGGCGGACGATGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTCCCAATTTGGCGGAC.....1912.002200000
...............................GACCATCAACGGTTATCCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000002
...............................GACCATCAACGGTTATCCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
..GTTGTCACCTCCGACCACTC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGGCTCCCAATTTGGCGGAC.....2311.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTCTCGCTGGCTCCCAATTTGGCGGAC.....2811.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCTCTCGCTGGCTCC..................1811.001100000
......................GCACACAATGACCATCAACGGTTATCCGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
.....GTCACCTCCGACCACTCGCACACAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCGCTGGCTCCCAATTTGGCGGAC.....2511.001100000
droGri2
TCGTTGTCACCTCGGATCATTCCCATACAATGACCATCAACGGATATCCGGTAAGTTGCCT-----------------------------------------ATTAATGCAG-CT-----T--------------------------------------------------------------T------------------------------------------------------------------------------------A-----------------------------------------------------------------------ATTTTAT-------------------ACTC-AAT------------------------CG--------------------------------------------------CTATTCTTT----TCTGTGCAGTATCGTCGCCAAGATATCCTCTCACTGGCTCCGAATTTGGCCACCGATGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............GATCATTCCCATACAATGACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110

Generated: 05/19/2015 at 03:09 AM