ID:dsi_4092 |
Coordinate:2r:5867378-5867431 - |
Confidence:Candidate |
Type:Unknown |
[View on UCSC Genome Browser {Cornell Mirror}] |
| Legend: | mature | star | mismatch in read |
|
exon [2r_5867237_5867377_-]; CDS [2r_5867237_5867377_-]; CDS [2r_5867432_5867623_-]; exon [2r_5867432_5867676_-]; intron [2r_5867378_5867431_-]
No Repeatable elements found
| ##################################################------------------------------------------------------################################################## GGTGGTCCTATTCGGACATTGTGGCAGCAGCACCCTCAAAGACCTCAAATGTGAGTTTTTTAGATCCTACTTCGAGCTGGGAACTAAATAAATTGATCTTTCAGATACCCCATGATTTTGTGATTACCATCAAAAAGGATAAGAAACTAGATAC **************************************************((.((((((((((.(((((........))))).))))).))))).)).......************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553488 RT_0-2 hours eggs |
M025 embryo |
M053 female body |
SRR553486 Makindu_3 day-old ovaries |
GSM343915 embryo |
|---|---|---|---|---|---|---|---|---|---|---|
| .........ATTCGGACATTGTGGCAGG.............................................................................................................................. | 19 | 1 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| ..................................................................................................................ATTTTGTGATTACCATCAAAAAGG................ | 24 | 0 | 1 | 1.00 | 1 | 0 | 0 | 1 | 0 | 0 |
| ..TGGTCCTATTCGGACATCGTGG.................................................................................................................................. | 22 | 1 | 1 | 1.00 | 1 | 0 | 0 | 0 | 1 | 0 |
| ........................................................................................................................TGATTACCATCAAAAAGGATAAGAAAC....... | 27 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| .............................................................................TAGGAACTTAATAAAGTGATCT....................................................... | 22 | 3 | 4 | 0.25 | 1 | 0 | 0 | 0 | 0 | 1 |
| ........................................................................................................................TGAGTAGGATCAAAAAGGA............... | 19 | 3 | 20 | 0.05 | 1 | 1 | 0 | 0 | 0 | 0 |
|
CCACCAGGATAAGCCTGTAACACCGTCGTCGTGGGAGTTTCTGGAGTTTACACTCAAAAAATCTAGGATGAAGCTCGACCCTTGATTTATTTAACTAGAAAGTCTATGGGGTACTAAAACACTAATGGTAGTTTTTCCTATTCTTTGATCTATG
**************************************************((.((((((((((.(((((........))))).))))).))))).)).......************************************************** |
Read size | # Mismatch | Hit Count | Total Norm | Total | SRR553486 Makindu_3 day-old ovaries |
SRR618934 dsim w501 ovaries |
SRR553487 NRT_0-2 hours eggs |
SRR553488 RT_0-2 hours eggs |
SRR553485 Chicharo_3 day-old ovaries |
|---|---|---|---|---|---|---|---|---|---|---|
| ..............................................................................................CGAGAAGGTCTATGGGGT.......................................... | 18 | 2 | 1 | 1.00 | 1 | 0 | 1 | 0 | 0 | 0 |
| .......................................................................AGCTCGACCCTTGAT.................................................................... | 15 | 0 | 1 | 1.00 | 1 | 1 | 0 | 0 | 0 | 0 |
| .............................................................TCTAGGTTGATGCTCGA............................................................................ | 17 | 2 | 20 | 0.80 | 16 | 6 | 0 | 8 | 2 | 0 |
| ..............................................................CTAGGTTGATGCTCGA............................................................................ | 16 | 2 | 20 | 0.60 | 12 | 4 | 0 | 5 | 2 | 1 |
| ......................................................CAAAAAATCTAGGATGATAGT............................................................................... | 21 | 3 | 5 | 0.20 | 1 | 0 | 0 | 0 | 1 | 0 |
| ................................................................................................AGAAGGTCTATGGGGT.......................................... | 16 | 1 | 5 | 0.20 | 1 | 0 | 1 | 0 | 0 | 0 |
| ..................................GAGTTTCTTGAGTTTA........................................................................................................ | 16 | 1 | 15 | 0.07 | 1 | 0 | 0 | 0 | 1 | 0 |
| .....AGGGTAAGCCTGTAA...................................................................................................................................... | 15 | 1 | 19 | 0.05 | 1 | 1 | 0 | 0 | 0 | 0 |
Generated: 04/24/2015 at 01:34 AM